Rmu_sc0009379.1_g000001

Sucrose transport

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009379.1
Physical Location & Seq
Reverse (-)
6432 .. 7688
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009379.1_g000001.1.cds

Sequence Viewer

Length: 1257 bp
atggaggtcgaaaccacccagaagaagaagccaacaccaccccaatcaagcccactgagaaagatcattctggtggcctcaattgccgccggaatccaatttggatgggccatacagctctccctgctaaccccctacgtccagctccttggcatctcccacacctgggcacccttcatctggctctgcggccccatctccggcatgctcgtccagcccatcgtcggctaccacagtgaccgctgcacctcccgcttcggccgacgccgtcccttcatcgctgccggctcctctctcgtcgccatcgccgtcttcctcatcggctacgccgccgacctcggccatcttttcggtgactccctcgacaaacccaccaaaccacgcgccatcgccatcttcgtggtcgggttctggatcctcgacgtggccaacaacatgttacagggcccctgccgtgctctcctggccgacatctccggcaccgacaccaagaaaatgcgaaccgcgaatgggttctactctttcttcatggccatcggcaacgtcctggggttctccgccgggtcctacacccacctccacaagatgttccccttcaccatgtccaaagcctgcgacgtctactgcgccaatctcaaaacctgcttcttcctctccatcgctctcctcatagccctcaccattctcgctctcgtatccgtcacggaaccaacaccaactccggaaatggtagaagctgtggaggagattgaggaggaggaggaggagaaggcagcaccggtgcctttcttcagcgagatccttggtgctttcaaagagctacagagaccgatgtggatcttgttggtggtgacatgcctcaactgggtcgcctggttccctttcctactgttcgacactgactggatgggaagggaggtgtacggaggggaggttgggaaaggcaggttgtatgccttgggggtcagagccggtgccctcggcctcatgctcaactctgtcgttttgggctgcgtctctctcggaattgagattctggcgcgtgcccttggtggggtcaagcgcttgtggggcgttgtcaattttctcctcgccatctgtttggccatgaccgttttgatcaccaaactagctcagtccactcgacaccacgccgtcgtttcaaccggagctgagccaccgccgccacccgccggtatcaaggcgggtgcgctggctatctttgctgtcttgggtatacctcaggcggtaagttaa

Protein Analysis

418

Amino Acids

45.2

Weight (kDa)

8.52

Isoelectric Point (pI)

43.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 621
Acc36I ACCTGC 2 cut(s) 650, 936
AccB1I GGYRCC 4 cut(s) 169, 479, 781, 974
AccI GTMKAC 2 cut(s) 621, 1237
AccII CGCG 3 cut(s) 384, 506, 1042
AccIII TCCGGA 1 cut(s) 721
AclWI GGATC 4 cut(s) 409, 422, 793, 845
AcoI YGGCCR 6 cut(s) 259, 340, 426, 465, 531, 1104
AcuI CTGAAG 1 cut(s) 775
AcyI GRCGYC 2 cut(s) 265, 618
AfaI GTAC 1 cut(s) 923
AfeI AGCGCT 1 cut(s) 1064
AflIII ACRYGT 1 cut(s) 435
AgeI ACCGGT 1 cut(s) 778
AgsI TTSAA 2 cut(s) 814, 1164
AjiI CACGTC 1 cut(s) 424
AjnI CCWGG 4 cut(s) 164, 462, 546, 872
AluBI AGCT 6 cut(s) 118, 145, 737, 820, 1133, 1172
AluI AGCT 6 cut(s) 118, 145, 737, 820, 1133, 1172
Alw21I GWGCWC 1 cut(s) 460
Alw26I GTCTC 2 cut(s) 820, 1021
AlwI GGATC 4 cut(s) 409, 422, 793, 845
Aor13HI TCCGGA 1 cut(s) 721
Aor51HI AGCGCT 1 cut(s) 1064
ApaI GGGCCC 1 cut(s) 449
ApeKI GCWGC 4 cut(s) 243, 281, 773, 1011
AsiGI ACCGGT 1 cut(s) 778
Asp700I GAANNNNTTC 1 cut(s) 512
AspLEI GCGC 5 cut(s) 386, 629, 1042, 1065, 1213
AspS9I GGNCC 5 cut(s) 108, 191, 445, 446, 564
AsuC2I CCSGG 1 cut(s) 562
AsuHPI GGTGA 5 cut(s) 365, 589, 670, 862, 1114
AvaII GGWCC 1 cut(s) 564
AxyI CCTNAGG 1 cut(s) 1242
BaeGI GKGCMC 4 cut(s) 172, 449, 979, 1048
BalI TGGCCA 3 cut(s) 428, 533, 1106
BamHI GGATCC 1 cut(s) 414
BanI GGYRCC 4 cut(s) 169, 479, 781, 974
BanII GRGCYC 1 cut(s) 449
BbsI GAAGAC 1 cut(s) 304
Bbv12I GWGCWC 1 cut(s) 460
BbvI GCAGC 4 cut(s) 230, 268, 785, 998
BceAI ACGGC 4 cut(s) 252, 293, 438, 1139
BciT130I CCWGG 4 cut(s) 166, 464, 548, 874
BciVI GTATCC 1 cut(s) 706
BclI TGATCA 1 cut(s) 1119
BcnI CCSGG 1 cut(s) 562
BcoDI GTCTC 2 cut(s) 820, 1021
BfaI CTAG 1 cut(s) 1130
BfmI CTRYAG 1 cut(s) 821
BfoI RGCGCY 1 cut(s) 1066
BfuAI ACCTGC 2 cut(s) 650, 936
BfuI GTATCC 1 cut(s) 706
BisI GCNGC 8 cut(s) 87, 190, 244, 282, 330, 774, 1012, 1184
BlpI GCTNAGC 1 cut(s) 1173
BlsI GCNGC 8 cut(s) 88, 191, 245, 283, 331, 775, 1013, 1185
Bme1390I CCNGG 5 cut(s) 166, 464, 548, 562, 874
Bme18I GGWCC 1 cut(s) 564
BmgBI CACGTC 1 cut(s) 424
BmgT120I GGNCC 5 cut(s) 108, 191, 445, 446, 564
BmrFI CCNGG 5 cut(s) 166, 464, 548, 562, 874
BmrI ACTGGG 1 cut(s) 874
BmsI GCATC 1 cut(s) 162
BmuI ACTGGG 1 cut(s) 874
BpiI GAAGAC 1 cut(s) 304
Bpu1102I GCTNAGC 1 cut(s) 1173
BpuMI CCSGG 1 cut(s) 562
BsaBI GATNNNNATC 1 cut(s) 836
BsaHI GRCGYC 2 cut(s) 265, 618
BsaI GGTCTC 1 cut(s) 820
BsaJI CCNNGG 8 cut(s) 148, 165, 337, 547, 802, 957, 979, 1048
BsaWI WCCGGW 3 cut(s) 721, 778, 1166
BsaXI ACNNNNNCTCC 4 cut(s) 703, 733, 918, 948
Bse118I RCCGGY 4 cut(s) 284, 778, 971, 1193
Bse1I ACTGG 2 cut(s) 869, 908
Bse21I CCTNAGG 1 cut(s) 1242
Bse8I GATNNNNATC 1 cut(s) 836
BseAI TCCGGA 1 cut(s) 721
BseBI CCWGG 4 cut(s) 166, 464, 548, 874
BseDI CCNNGG 8 cut(s) 148, 165, 337, 547, 802, 957, 979, 1048
BseGI GGATG 2 cut(s) 110, 912
BseJI GATNNNNATC 1 cut(s) 836
BseMII CTCAG 4 cut(s) 47, 1148, 1164, 1256
BseNI ACTGG 2 cut(s) 869, 908
BseRI GAGGAG 9 cut(s) 280, 656, 758, 767, 770, 773, 776, 779, 1079
BseSI GKGCMC 4 cut(s) 172, 449, 979, 1048
BseX3I CGGCCG 1 cut(s) 259
BseXI GCAGC 4 cut(s) 230, 268, 785, 998
BsgI GTGCAG 1 cut(s) 229
Bsh1236I CGCG 3 cut(s) 384, 506, 1042
Bsh1285I CGRYCG 1 cut(s) 262
BshNI GGYRCC 4 cut(s) 169, 479, 781, 974
BshTI ACCGGT 1 cut(s) 778
BsiEI CGRYCG 1 cut(s) 262
BsiHKAI GWGCWC 1 cut(s) 460
BslFI GGGAC 1 cut(s) 255
BsmAI GTCTC 2 cut(s) 820, 1021
BsmBI CGTCTC 1 cut(s) 1021
BsmFI GGGAC 1 cut(s) 255
Bso31I GGTCTC 1 cut(s) 820
Bsp120I GGGCCC 1 cut(s) 445
Bsp1286I GDGCHC 5 cut(s) 172, 449, 460, 979, 1048
Bsp13I TCCGGA 1 cut(s) 721
Bsp143I GATC 5 cut(s) 63, 414, 798, 837, 1119
Bsp1720I GCTNAGC 1 cut(s) 1173
BspCNI CTCAG 4 cut(s) 48, 1147, 1165, 1255
BspEI TCCGGA 1 cut(s) 721
BspFNI CGCG 3 cut(s) 384, 506, 1042
BspMI ACCTGC 2 cut(s) 650, 936
BspPI GGATC 4 cut(s) 409, 422, 793, 845
BspT107I GGYRCC 4 cut(s) 169, 479, 781, 974
BspTNI GGTCTC 1 cut(s) 820
BsrFI RCCGGY 4 cut(s) 284, 778, 971, 1193
BsrI ACTGG 2 cut(s) 869, 908
BssAI RCCGGY 4 cut(s) 284, 778, 971, 1193
BssECI CCNNGG 8 cut(s) 148, 165, 337, 547, 802, 957, 979, 1048
BssMI GATC 5 cut(s) 63, 414, 798, 837, 1119
BssNAI GTATAC 1 cut(s) 1238
BssNI GRCGYC 2 cut(s) 265, 618
BssT1I CCWWGG 4 cut(s) 148, 802, 957, 1048
Bst1107I GTATAC 1 cut(s) 1238
Bst2UI CCWGG 4 cut(s) 166, 464, 548, 874
Bst4CI ACNGT 3 cut(s) 236, 891, 1114
BstACI GRCGYC 2 cut(s) 265, 618
BstC8I GCNNGC 5 cut(s) 206, 286, 613, 1044, 1215
BstDEI CTNAG 4 cut(s) 56, 1134, 1173, 1242
BstF5I GGATG 2 cut(s) 110, 912
BstFNI CGCG 3 cut(s) 384, 506, 1042
BstH2I RGCGCY 1 cut(s) 1066
BstHHI GCGC 5 cut(s) 386, 629, 1042, 1065, 1213
BstKTI GATC 5 cut(s) 66, 417, 801, 840, 1122
BstMAI GTCTC 2 cut(s) 820, 1021
BstMBI GATC 5 cut(s) 63, 414, 798, 837, 1119
BstMCI CGRYCG 1 cut(s) 262
BstMWI GCNNNNNNNGC 8 cut(s) 83, 124, 214, 252, 464, 1071, 1183, 1223
BstNI CCWGG 4 cut(s) 166, 464, 548, 874
BstNSI RCATGY 3 cut(s) 208, 439, 858
BstSCI CCNGG 5 cut(s) 164, 462, 546, 560, 872
BstSFI CTRYAG 1 cut(s) 821
BstSLI GKGCMC 4 cut(s) 172, 449, 979, 1048
BstUI CGCG 3 cut(s) 384, 506, 1042
BstV1I GCAGC 4 cut(s) 230, 268, 785, 998
BstV2I GAAGAC 1 cut(s) 304
BstX2I RGATCY 3 cut(s) 414, 798, 837
BstXI CCANNNNNNTGG 3 cut(s) 149, 400, 1102
BstYI RGATCY 3 cut(s) 414, 798, 837
BstZ17I GTATAC 1 cut(s) 1238
BstZI CGGCCG 1 cut(s) 259
Bsu36I CCTNAGG 1 cut(s) 1242
BsuI GTATCC 1 cut(s) 706
BtgZI GCGATG 4 cut(s) 262, 289, 373, 643
BtrI CACGTC 1 cut(s) 424
BtsCI GGATG 2 cut(s) 110, 912
BtsIMutI CAGTG 3 cut(s) 53, 241, 897
BveI ACCTGC 2 cut(s) 650, 936
Cac8I GCNNGC 5 cut(s) 206, 286, 613, 1044, 1215
CfoI GCGC 5 cut(s) 386, 629, 1042, 1065, 1213
Cfr10I RCCGGY 4 cut(s) 284, 778, 971, 1193
Cfr13I GGNCC 5 cut(s) 108, 191, 445, 446, 564
CseI GACGC 2 cut(s) 273, 1003
Csp6I GTAC 1 cut(s) 922
CspAI ACCGGT 1 cut(s) 778
CviAII CATG 7 cut(s) 205, 436, 529, 601, 855, 988, 1108
CviQI GTAC 1 cut(s) 922
DdeI CTNAG 4 cut(s) 56, 1134, 1173, 1242
DpnI GATC 5 cut(s) 65, 416, 800, 839, 1121
DpnII GATC 5 cut(s) 63, 414, 798, 837, 1119
EaeI YGGCCR 6 cut(s) 259, 340, 426, 465, 531, 1104
EagI CGGCCG 1 cut(s) 259
EciI GGCGGA 1 cut(s) 547
EclXI CGGCCG 1 cut(s) 259
Eco130I CCWWGG 4 cut(s) 148, 802, 957, 1048
Eco24I GRGCYC 1 cut(s) 449
Eco31I GGTCTC 1 cut(s) 820
Eco47I GGWCC 1 cut(s) 564
Eco47III AGCGCT 1 cut(s) 1064
Eco52I CGGCCG 1 cut(s) 259
Eco57I CTGAAG 1 cut(s) 775
Eco81I CCTNAGG 1 cut(s) 1242
EcoO109I RGGNCCY 3 cut(s) 445, 446, 564
EcoRII CCWGG 4 cut(s) 164, 462, 546, 872
EcoT14I CCWWGG 4 cut(s) 148, 802, 957, 1048
EcoT38I GRGCYC 1 cut(s) 449
ErhI CCWWGG 4 cut(s) 148, 802, 957, 1048
Esp3I CGTCTC 1 cut(s) 1021
FaeI CATG 7 cut(s) 208, 439, 532, 604, 858, 991, 1111
FaqI GGGAC 1 cut(s) 255
FatI CATG 7 cut(s) 204, 435, 528, 600, 854, 987, 1107
FauI CCCGC 3 cut(s) 260, 1198, 1198
FbaI TGATCA 1 cut(s) 1119
FblI GTMKAC 2 cut(s) 621, 1237
Fnu4HI GCNGC 8 cut(s) 87, 190, 244, 282, 330, 774, 1012, 1184
FokI GGATG 2 cut(s) 117, 919
FriOI GRGCYC 1 cut(s) 449
Fsp4HI GCNGC 8 cut(s) 87, 190, 244, 282, 330, 774, 1012, 1184
FspBI CTAG 1 cut(s) 1130
GlaI GCGC 5 cut(s) 385, 628, 1041, 1064, 1212
GluI GCNGC 8 cut(s) 87, 190, 244, 282, 330, 774, 1012, 1184
HaeII RGCGCY 1 cut(s) 1066
HgaI GACGC 2 cut(s) 273, 1003
HhaI GCGC 5 cut(s) 386, 629, 1042, 1065, 1213
Hin1I GRCGYC 2 cut(s) 265, 618
Hin1II CATG 7 cut(s) 208, 439, 532, 604, 858, 991, 1111
Hin6I GCGC 5 cut(s) 384, 627, 1040, 1063, 1211
HinP1I GCGC 5 cut(s) 384, 627, 1040, 1063, 1211
HinfI GANTC 3 cut(s) 93, 356, 1033
HphI GGTGA 5 cut(s) 365, 589, 670, 862, 1114
Hpy166II GTNNAC 4 cut(s) 622, 922, 1140, 1238
Hpy188I TCNGA 2 cut(s) 968, 1025
Hpy188III TCNNGA 2 cut(s) 412, 722
Hpy8I GTNNAC 4 cut(s) 622, 922, 1140, 1238
Hpy99I CGWCG 6 cut(s) 227, 267, 302, 425, 620, 1160
HpyAV CCTTC 5 cut(s) 184, 283, 604, 763, 906
HpyCH4III ACNGT 3 cut(s) 236, 891, 1114
HpyCH4IV ACGT 4 cut(s) 138, 423, 543, 618
HpyCH4V TGCA 1 cut(s) 246
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 124, 214, 252, 464, 1071, 1183, 1223
HpyF3I CTNAG 4 cut(s) 56, 1134, 1173, 1242
HpySE526I ACGT 4 cut(s) 138, 423, 543, 618
Hsp92I GRCGYC 2 cut(s) 265, 618
Hsp92II CATG 7 cut(s) 208, 439, 532, 604, 858, 991, 1111
HspAI GCGC 5 cut(s) 384, 627, 1040, 1063, 1211
Kpn2I TCCGGA 1 cut(s) 721
KroI GCCGGC 1 cut(s) 284
KroNI GCCGGC 1 cut(s) 286
Ksp22I TGATCA 1 cut(s) 1119
Kzo9I GATC 5 cut(s) 63, 414, 798, 837, 1119
LmnI GCTCC 3 cut(s) 150, 293, 1169
Lsp1109I GCAGC 4 cut(s) 230, 268, 785, 998
LweI GCATC 1 cut(s) 162
MaeI CTAG 1 cut(s) 1130
MaeII ACGT 4 cut(s) 138, 423, 543, 618
MaeIII GTNAC 5 cut(s) 236, 353, 438, 700, 850
MalI GATC 5 cut(s) 65, 416, 800, 839, 1121
MboI GATC 5 cut(s) 63, 414, 798, 837, 1119
MboII GAAGA 7 cut(s) 34, 37, 304, 388, 517, 640, 781
MfeI CAATTG 1 cut(s) 81
MflI RGATCY 3 cut(s) 414, 798, 837
MhlI GDGCHC 5 cut(s) 172, 449, 460, 979, 1048
MlsI TGGCCA 3 cut(s) 428, 533, 1106
MluCI AATT 4 cut(s) 81, 98, 1026, 1081
MluNI TGGCCA 3 cut(s) 428, 533, 1106
MlyI GAGTC 1 cut(s) 350
Mox20I TGGCCA 3 cut(s) 428, 533, 1106
MroI TCCGGA 1 cut(s) 721
MroNI GCCGGC 1 cut(s) 284
MroXI GAANNNNTTC 1 cut(s) 512
MscI TGGCCA 3 cut(s) 428, 533, 1106
MseI TTAA 1 cut(s) 1255
MslI CAYNNNNRTG 2 cut(s) 71, 398
Msp20I TGGCCA 3 cut(s) 428, 533, 1106
MspA1I CMGCKG 1 cut(s) 243
MspR9I CCNGG 5 cut(s) 166, 464, 548, 562, 874
MunI CAATTG 1 cut(s) 81
MvaI CCWGG 4 cut(s) 166, 464, 548, 874
MvnI CGCG 3 cut(s) 384, 506, 1042
MwoI GCNNNNNNNGC 8 cut(s) 83, 124, 214, 252, 464, 1071, 1183, 1223
NaeI GCCGGC 1 cut(s) 286
NciI CCSGG 1 cut(s) 562
NdeII GATC 5 cut(s) 63, 414, 798, 837, 1119
NgoMIV GCCGGC 1 cut(s) 284
NlaIII CATG 7 cut(s) 208, 439, 532, 604, 858, 991, 1111
NmeAIII GCCGAG 2 cut(s) 318, 960
NmuCI GTSAC 4 cut(s) 236, 353, 700, 850
NspI RCATGY 3 cut(s) 208, 439, 858
PaeI GCATGC 1 cut(s) 208
PciI ACATGT 1 cut(s) 435
PcsI WCGNNNNNNNCGW 2 cut(s) 306, 396
PdiI GCCGGC 1 cut(s) 286
PdmI GAANNNNTTC 1 cut(s) 512
PfeI GAWTC 2 cut(s) 93, 1033
PflFI GACNNNGTC 1 cut(s) 267
PinAI ACCGGT 1 cut(s) 778
PkrI GCNGC 8 cut(s) 88, 191, 245, 283, 331, 775, 1013, 1185
PleI GAGTC 1 cut(s) 350
PpsI GAGTC 1 cut(s) 350
PpuMI RGGWCCY 1 cut(s) 564
PscI ACATGT 1 cut(s) 435
Psp5II RGGWCCY 1 cut(s) 564
Psp6I CCWGG 4 cut(s) 164, 462, 546, 872
PspGI CCWGG 4 cut(s) 164, 462, 546, 872
PspOMI GGGCCC 1 cut(s) 445
PspPI GGNCC 5 cut(s) 108, 191, 445, 446, 564
PspPPI RGGWCCY 1 cut(s) 564
PsuI RGATCY 3 cut(s) 414, 798, 837
PsyI GACNNNGTC 1 cut(s) 267
RsaI GTAC 1 cut(s) 923
RsaNI GTAC 1 cut(s) 922
RseI CAYNNNNRTG 2 cut(s) 71, 398
SaqAI TTAA 1 cut(s) 1255
SatI GCNGC 8 cut(s) 87, 190, 244, 282, 330, 774, 1012, 1184
Sau3AI GATC 5 cut(s) 63, 414, 798, 837, 1119
Sau96I GGNCC 5 cut(s) 108, 191, 445, 446, 564
SchI GAGTC 1 cut(s) 350
ScrFI CCNGG 5 cut(s) 166, 464, 548, 562, 874
SduI GDGCHC 5 cut(s) 172, 449, 460, 979, 1048
SfaNI GCATC 1 cut(s) 162
SfcI CTRYAG 1 cut(s) 821
SgrAI CRCCGGYG 1 cut(s) 778
SinI GGWCC 1 cut(s) 564
SmiMI CAYNNNNRTG 2 cut(s) 71, 398
SphI GCATGC 1 cut(s) 208
Sse9I AATT 4 cut(s) 81, 98, 1026, 1081
SspMI CTAG 1 cut(s) 1130
StyD4I CCNGG 5 cut(s) 164, 462, 546, 560, 872
StyI CCWWGG 4 cut(s) 148, 802, 957, 1048
TaaI ACNGT 3 cut(s) 236, 891, 1114
TaiI ACGT 4 cut(s) 141, 426, 546, 621
TaqI TCGA 5 cut(s) 9, 363, 420, 894, 1144
TaqII GACCGA 1 cut(s) 844
TasI AATT 4 cut(s) 81, 98, 1026, 1081
TauI GCSGC 4 cut(s) 89, 192, 332, 1186
TfiI GAWTC 2 cut(s) 93, 1033
Tru1I TTAA 1 cut(s) 1255
Tru9I TTAA 1 cut(s) 1255
TscAI CASTG 3 cut(s) 60, 241, 904
TseFI GTSAC 4 cut(s) 236, 353, 700, 850
TseI GCWGC 4 cut(s) 243, 281, 773, 1011
Tsp45I GTSAC 4 cut(s) 236, 353, 700, 850
TspDTI ATGAA 3 cut(s) 166, 265, 517
TspGWI ACGGA 3 cut(s) 688, 719, 939
TspRI CASTG 3 cut(s) 60, 241, 904
Tth111I GACNNNGTC 1 cut(s) 267
VpaK11BI GGWCC 1 cut(s) 564
XceI RCATGY 3 cut(s) 208, 439, 858
XmiI GTMKAC 2 cut(s) 621, 1237
XmnI GAANNNNTTC 1 cut(s) 512
XspI CTAG 1 cut(s) 1130
ZraI GACGTC 1 cut(s) 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.