Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0001365

Physical Location & Seq

Genomic Coordinates Reverse (-)

31204101 .. 31206883

Gene Structure 2783 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG177500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGGAGGTCGAAACCACCCAGAAGAAGAAGCCAACACCACCCCAATCAAGCCCACTGAGAAAGATCATTCTGGTTGCCTCAATTGCCGCCGGAATCCAATTTGGATGGGCCATACAGCTCTCCCTGCTAACCCCCTACGTCCAGCTCCTCGGCATCTCCCACACCTGGGCACCCTTCATCTGGCTCTGCGGCCCCATCTCCGGCATGCTCGTCCAGCCCATCGTCGGCTACCACAGTGACCGCTGCACCTCCCGCTTCGGCCGACGCCGTCCCTTCATCGCTGCCGGCTCCTCTCTCGTCGCCATGGCCGTCTTCCTCATCGGCTACGCCGCCGACCTCGGCCATCTTTTCGGTGACTCCCTCGACAAACCCACCAAACCACGCGCCATCGCCATCTTCGTGGTCGGGTTCTGGATCCTCGACGTGGCCAACAACATGTTACAGGGCCCCTGCCGTGCTCTCCTGGCCGACATCTCCGGCTCCGACACCAAGAAAATGCGAACCGCGAATGGGTTCTACTCTTTCTTCATGGCCATCGGCAACGTCCTGGGGTTCTCCGCCGGGTCCTACACCCACCTCCACAAGATGTTCCCCTTCACCATGTCCAAAGCCTGCGACGTCTACTGCGCCAATCTCAAAACCTGCTTCTTCCTCTCCATCGCTCTCCTTATAGCCCTCACCATTCTCGCTCTCGTATCCGTCACGGAACCAACACCAACTCCAGAAATGGTAGAAGCTGTGGAGGAGATTGAGGAGGAGAAGGCAGCACCGGTGCCTTTCTTCAGCGAGATCCTTGGTGCTTTCAAAGAGCTACAGAGACCGATGCGGATCTTGTTGGTGGTGACATGCCTCAACTGGGTCGCGTGGTTCCCTTTCCTACTGTTCGACACTGACTGGATGGGAAGGGAGGTGTACGGAGGGGAGGTCGGGAAAGGCAGGTTGTATGCCTTGGGGGTCAGAGCCGGTGCCCTCGGCCTCATGCTCAACTCTGTCGTTTTGGGCTGCGTCTCTCTCGGAATTGAGATTCTGGCGCGTGCCCTTGGTGGGGTCAAGCGCTTGTGGGGCGTTGTCAATTTTCTCCTCGCCATCTGTTTGGCCATGACCGTTTTGATCACCAAACTAGCTCAGTCCACTCGACACCACGCCGTCGTTTCAACCGGAGCTGAGCCACCGCCGCCACCCGCTGGTATCAAGGCGGGTGCGCTGGCTATCTTTGCTGTCTTGGGTATACCTCAGGCGGTAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008506 GO:0008515 GO:0008643 GO:0009669 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015154 GO:0015157 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015766 GO:0015770 GO:0015772 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0098655 GO:0098660 GO:0098662 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_2

Protein Analysis

415

Amino Acids

44.79

Weight (kDa)

9.02

Isoelectric Point (pI)

41.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_2	PF13347	34 - 289	7.5e-10	MFS/sugar transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22710 AT1G66570 AT1G66570 AT1G66570 AT2G14670 AT5G06170 AT5G43610
fragaria_vesca	FvH4_2g12320 FvH4_2g12320 FvH4_2g12320 FvH4_2g22550 FvH4_2g40110 FvH4_2g40120
malus_domestica	MD05G1040000.v1.1 MD10G1045900.v1.1 MD12G1059700.v1.1
prunus_persica	Prupe.8G052700_v2.0.a1
pyrus_communis	pycom05g03270 pycom10g03210
rosa_chinensis	RchiOBHm_Chr6g0272341 RchiOBHm_Chr6g0300591 RchiOBHm_Chr6g0300631
rosa_laevigata	RLG00000011315 RLG00000011321 RLG00000013682
rosa_multiflora	Rmu_sc0004226.1_g000016 Rmu_sc0004226.1_g000019 Rmu_sc0009379.1_g000001 Rmu_sc0009424.1_g000002 Rmu_sc0022725.1_g000003 Rmu_sc0032937.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167570 Rroxscaffold_7G00167610 Rroxscaffold_7G00196420
rosa_rugosa	Rorug06G0068000 Rorug06G0068100 Rorug06G0297700 Rorug06G0297800 Rorug06G0297800
rosa_samantha	Rh6AG184300 Rh6AG410300 Rh6AG410600 Rh6BG187600 Rh6BG417400 Rh6CG185700 Rh6CG425000 Rh6CG425300 Rh6DG177500 Rh6DG410500
rosa_wichuraiana	Rw6G015890 Rw6G015930 Rw6G035880 Rw6G035920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	621
Acc36I	ACCTGC	2 cut(s)	650, 927
AccB1I	GGYRCC	3 cut(s)	169, 772, 965
AccB7I	CCANNNNNTGG	1 cut(s)	1184
AccI	GTMKAC	2 cut(s)	621, 1228
AccII	CGCG	4 cut(s)	384, 506, 863, 1033
AclWI	GGATC	4 cut(s)	409, 422, 784, 836
AcoI	YGGCCR	7 cut(s)	259, 306, 340, 426, 465, 531, 1095
AcuI	CTGAAG	1 cut(s)	766
AcyI	GRCGYC	2 cut(s)	265, 618
AfaI	GTAC	1 cut(s)	914
AfeI	AGCGCT	1 cut(s)	1055
AflIII	ACRYGT	1 cut(s)	435
AgeI	ACCGGT	1 cut(s)	769
AgsI	TTSAA	2 cut(s)	805, 1155
AjiI	CACGTC	1 cut(s)	424
AjnI	CCWGG	3 cut(s)	164, 462, 546
AluBI	AGCT	6 cut(s)	118, 145, 737, 811, 1124, 1163
AluI	AGCT	6 cut(s)	118, 145, 737, 811, 1124, 1163
Alw21I	GWGCWC	1 cut(s)	460
Alw26I	GTCTC	2 cut(s)	811, 1012
AlwI	GGATC	4 cut(s)	409, 422, 784, 836
Aor51HI	AGCGCT	1 cut(s)	1055
ApaI	GGGCCC	1 cut(s)	449
ApeKI	GCWGC	4 cut(s)	243, 281, 764, 1002
AsiGI	ACCGGT	1 cut(s)	769
Asp700I	GAANNNNTTC	1 cut(s)	512
AspLEI	GCGC	5 cut(s)	386, 629, 1033, 1056, 1204
AspS9I	GGNCC	5 cut(s)	108, 191, 445, 446, 564
AsuC2I	CCSGG	1 cut(s)	562
AsuHPI	GGTGA	5 cut(s)	365, 589, 670, 853, 1105
AvaII	GGWCC	1 cut(s)	564
AxyI	CCTNAGG	1 cut(s)	1233
BaeGI	GKGCMC	4 cut(s)	172, 449, 970, 1039
BalI	TGGCCA	3 cut(s)	428, 533, 1097
BamHI	GGATCC	1 cut(s)	414
BanI	GGYRCC	3 cut(s)	169, 772, 965
BanII	GRGCYC	1 cut(s)	449
BbsI	GAAGAC	1 cut(s)	304
Bbv12I	GWGCWC	1 cut(s)	460
BbvI	GCAGC	4 cut(s)	230, 268, 776, 989
BceAI	ACGGC	4 cut(s)	252, 293, 438, 1130
BciT130I	CCWGG	3 cut(s)	166, 464, 548
BciVI	GTATCC	1 cut(s)	706
BclI	TGATCA	1 cut(s)	1110
BcnI	CCSGG	1 cut(s)	562
BcoDI	GTCTC	2 cut(s)	811, 1012
BfaI	CTAG	1 cut(s)	1121
BfmI	CTRYAG	1 cut(s)	812
BfoI	RGCGCY	1 cut(s)	1057
BfuAI	ACCTGC	2 cut(s)	650, 927
BfuI	GTATCC	1 cut(s)	706
BisI	GCNGC	8 cut(s)	87, 190, 244, 282, 330, 765, 1003, 1175
BlpI	GCTNAGC	1 cut(s)	1164
BlsI	GCNGC	8 cut(s)	88, 191, 245, 283, 331, 766, 1004, 1176
Bme1390I	CCNGG	4 cut(s)	166, 464, 548, 562
Bme18I	GGWCC	1 cut(s)	564
BmgBI	CACGTC	1 cut(s)	424
BmgT120I	GGNCC	5 cut(s)	108, 191, 445, 446, 564
BmrFI	CCNGG	4 cut(s)	166, 464, 548, 562
BmrI	ACTGGG	1 cut(s)	865
BmsI	GCATC	2 cut(s)	162, 813
BmuI	ACTGGG	1 cut(s)	865
BpiI	GAAGAC	1 cut(s)	304
BpmI	CTGGAG	1 cut(s)	705
Bpu1102I	GCTNAGC	1 cut(s)	1164
BpuMI	CCSGG	1 cut(s)	562
BsaBI	GATNNNNATC	1 cut(s)	827
BsaHI	GRCGYC	2 cut(s)	265, 618
BsaI	GGTCTC	1 cut(s)	811
BsaJI	CCNNGG	9 cut(s)	148, 165, 303, 337, 547, 793, 948, 970, 1039
BsaWI	WCCGGW	2 cut(s)	769, 1157
BsaXI	ACNNNNNCTCC	4 cut(s)	703, 733, 909, 939
Bse118I	RCCGGY	3 cut(s)	284, 769, 962
Bse1I	ACTGG	2 cut(s)	860, 899
Bse21I	CCTNAGG	1 cut(s)	1233
Bse8I	GATNNNNATC	1 cut(s)	827
BseBI	CCWGG	3 cut(s)	166, 464, 548
BseDI	CCNNGG	9 cut(s)	148, 165, 303, 337, 547, 793, 948, 970, 1039
BseGI	GGATG	2 cut(s)	110, 903
BseJI	GATNNNNATC	1 cut(s)	827
BseMII	CTCAG	4 cut(s)	47, 1139, 1155, 1247
BseNI	ACTGG	2 cut(s)	860, 899
BseRI	GAGGAG	6 cut(s)	137, 280, 758, 767, 770, 1070
BseSI	GKGCMC	4 cut(s)	172, 449, 970, 1039
BseX3I	CGGCCG	1 cut(s)	259
BseXI	GCAGC	4 cut(s)	230, 268, 776, 989
BsgI	GTGCAG	1 cut(s)	229
Bsh1236I	CGCG	4 cut(s)	384, 506, 863, 1033
Bsh1285I	CGRYCG	1 cut(s)	262
BshNI	GGYRCC	3 cut(s)	169, 772, 965
BshTI	ACCGGT	1 cut(s)	769
BsiEI	CGRYCG	1 cut(s)	262
BsiHKAI	GWGCWC	1 cut(s)	460
BsiSI	CCGG	8 cut(s)	90, 201, 285, 477, 561, 770, 963, 1158
BslFI	GGGAC	1 cut(s)	255
BsmAI	GTCTC	2 cut(s)	811, 1012
BsmBI	CGTCTC	1 cut(s)	1012
BsmFI	GGGAC	1 cut(s)	255
Bso31I	GGTCTC	1 cut(s)	811
Bsp120I	GGGCCC	1 cut(s)	445
Bsp1286I	GDGCHC	5 cut(s)	172, 449, 460, 970, 1039
Bsp143I	GATC	5 cut(s)	63, 414, 789, 828, 1110
Bsp1720I	GCTNAGC	1 cut(s)	1164
Bsp19I	CCATGG	1 cut(s)	303
BspCNI	CTCAG	4 cut(s)	48, 1138, 1156, 1246
BspFNI	CGCG	4 cut(s)	384, 506, 863, 1033
BspMI	ACCTGC	2 cut(s)	650, 927
BspPI	GGATC	4 cut(s)	409, 422, 784, 836
BspT107I	GGYRCC	3 cut(s)	169, 772, 965
BspTNI	GGTCTC	1 cut(s)	811
BsrFI	RCCGGY	3 cut(s)	284, 769, 962
BsrI	ACTGG	2 cut(s)	860, 899
BssAI	RCCGGY	3 cut(s)	284, 769, 962
BssECI	CCNNGG	9 cut(s)	148, 165, 303, 337, 547, 793, 948, 970, 1039
BssMI	GATC	5 cut(s)	63, 414, 789, 828, 1110
BssNAI	GTATAC	1 cut(s)	1229
BssNI	GRCGYC	2 cut(s)	265, 618
BssT1I	CCWWGG	4 cut(s)	303, 793, 948, 1039
Bst1107I	GTATAC	1 cut(s)	1229
Bst2UI	CCWGG	3 cut(s)	166, 464, 548
Bst4CI	ACNGT	3 cut(s)	236, 882, 1105
BstACI	GRCGYC	2 cut(s)	265, 618
BstC8I	GCNNGC	5 cut(s)	206, 286, 613, 1035, 1206
BstDEI	CTNAG	4 cut(s)	56, 1125, 1164, 1233
BstDSI	CCRYGG	1 cut(s)	303
BstF5I	GGATG	2 cut(s)	110, 903
BstFNI	CGCG	4 cut(s)	384, 506, 863, 1033
BstH2I	RGCGCY	1 cut(s)	1057
BstHHI	GCGC	5 cut(s)	386, 629, 1033, 1056, 1204
BstKTI	GATC	5 cut(s)	66, 417, 792, 831, 1113
BstMAI	GTCTC	2 cut(s)	811, 1012
BstMBI	GATC	5 cut(s)	63, 414, 789, 828, 1110
BstMCI	CGRYCG	1 cut(s)	262
BstMWI	GCNNNNNNNGC	8 cut(s)	83, 124, 214, 252, 464, 1062, 1174, 1214
BstNI	CCWGG	3 cut(s)	166, 464, 548
BstNSI	RCATGY	3 cut(s)	208, 439, 849
BstSCI	CCNGG	4 cut(s)	164, 462, 546, 560
BstSFI	CTRYAG	1 cut(s)	812
BstSLI	GKGCMC	4 cut(s)	172, 449, 970, 1039
BstUI	CGCG	4 cut(s)	384, 506, 863, 1033
BstV1I	GCAGC	4 cut(s)	230, 268, 776, 989
BstV2I	GAAGAC	1 cut(s)	304
BstX2I	RGATCY	3 cut(s)	414, 789, 828
BstXI	CCANNNNNNTGG	2 cut(s)	400, 1093
BstYI	RGATCY	3 cut(s)	414, 789, 828
BstZ17I	GTATAC	1 cut(s)	1229
BstZI	CGGCCG	1 cut(s)	259
Bsu36I	CCTNAGG	1 cut(s)	1233
BsuI	GTATCC	1 cut(s)	706
BtgI	CCRYGG	1 cut(s)	303
BtgZI	GCGATG	3 cut(s)	262, 373, 643
BtrI	CACGTC	1 cut(s)	424
BtsCI	GGATG	2 cut(s)	110, 903
BtsIMutI	CAGTG	3 cut(s)	53, 241, 888
BveI	ACCTGC	2 cut(s)	650, 927
Cac8I	GCNNGC	5 cut(s)	206, 286, 613, 1035, 1206
CfoI	GCGC	5 cut(s)	386, 629, 1033, 1056, 1204
Cfr10I	RCCGGY	3 cut(s)	284, 769, 962
Cfr13I	GGNCC	5 cut(s)	108, 191, 445, 446, 564
CseI	GACGC	2 cut(s)	273, 994
Csp6I	GTAC	1 cut(s)	913
CspAI	ACCGGT	1 cut(s)	769
CviAII	CATG	8 cut(s)	205, 304, 436, 529, 601, 846, 979, 1099
CviQI	GTAC	1 cut(s)	913
DdeI	CTNAG	4 cut(s)	56, 1125, 1164, 1233
DpnI	GATC	5 cut(s)	65, 416, 791, 830, 1112
DpnII	GATC	5 cut(s)	63, 414, 789, 828, 1110
EaeI	YGGCCR	7 cut(s)	259, 306, 340, 426, 465, 531, 1095
EagI	CGGCCG	1 cut(s)	259
EciI	GGCGGA	1 cut(s)	547
EclXI	CGGCCG	1 cut(s)	259
Eco130I	CCWWGG	4 cut(s)	303, 793, 948, 1039
Eco24I	GRGCYC	1 cut(s)	449
Eco31I	GGTCTC	1 cut(s)	811
Eco47I	GGWCC	1 cut(s)	564
Eco47III	AGCGCT	1 cut(s)	1055
Eco52I	CGGCCG	1 cut(s)	259
Eco57I	CTGAAG	1 cut(s)	766
Eco81I	CCTNAGG	1 cut(s)	1233
EcoO109I	RGGNCCY	3 cut(s)	445, 446, 564
EcoRII	CCWGG	3 cut(s)	164, 462, 546
EcoT14I	CCWWGG	4 cut(s)	303, 793, 948, 1039
EcoT38I	GRGCYC	1 cut(s)	449
ErhI	CCWWGG	4 cut(s)	303, 793, 948, 1039
Esp3I	CGTCTC	1 cut(s)	1012
FaeI	CATG	8 cut(s)	208, 307, 439, 532, 604, 849, 982, 1102
FaqI	GGGAC	1 cut(s)	255
FatI	CATG	8 cut(s)	204, 303, 435, 528, 600, 845, 978, 1098
FauI	CCCGC	3 cut(s)	260, 1189, 1189
FbaI	TGATCA	1 cut(s)	1110
FblI	GTMKAC	2 cut(s)	621, 1228
Fnu4HI	GCNGC	8 cut(s)	87, 190, 244, 282, 330, 765, 1003, 1175
FokI	GGATG	2 cut(s)	117, 910
FriOI	GRGCYC	1 cut(s)	449
Fsp4HI	GCNGC	8 cut(s)	87, 190, 244, 282, 330, 765, 1003, 1175
FspBI	CTAG	1 cut(s)	1121
GlaI	GCGC	5 cut(s)	385, 628, 1032, 1055, 1203
GluI	GCNGC	8 cut(s)	87, 190, 244, 282, 330, 765, 1003, 1175
GsuI	CTGGAG	1 cut(s)	705
HaeII	RGCGCY	1 cut(s)	1057
HapII	CCGG	8 cut(s)	90, 201, 285, 477, 561, 770, 963, 1158
HgaI	GACGC	2 cut(s)	273, 994
HhaI	GCGC	5 cut(s)	386, 629, 1033, 1056, 1204
Hin1I	GRCGYC	2 cut(s)	265, 618
Hin1II	CATG	8 cut(s)	208, 307, 439, 532, 604, 849, 982, 1102
Hin6I	GCGC	5 cut(s)	384, 627, 1031, 1054, 1202
HinP1I	GCGC	5 cut(s)	384, 627, 1031, 1054, 1202
HinfI	GANTC	3 cut(s)	93, 356, 1024
HpaII	CCGG	8 cut(s)	90, 201, 285, 477, 561, 770, 963, 1158
HphI	GGTGA	5 cut(s)	365, 589, 670, 853, 1105
Hpy166II	GTNNAC	4 cut(s)	622, 913, 1131, 1229
Hpy188I	TCNGA	3 cut(s)	484, 959, 1016
Hpy188III	TCNNGA	3 cut(s)	412, 722, 928
Hpy8I	GTNNAC	4 cut(s)	622, 913, 1131, 1229
Hpy99I	CGWCG	6 cut(s)	227, 267, 302, 425, 620, 1151
HpyAV	CCTTC	5 cut(s)	184, 283, 604, 754, 897
HpyCH4III	ACNGT	3 cut(s)	236, 882, 1105
HpyCH4IV	ACGT	4 cut(s)	138, 423, 543, 618
HpyCH4V	TGCA	1 cut(s)	246
HpyF10VI	GCNNNNNNNGC	8 cut(s)	83, 124, 214, 252, 464, 1062, 1174, 1214
HpyF3I	CTNAG	4 cut(s)	56, 1125, 1164, 1233
HpySE526I	ACGT	4 cut(s)	138, 423, 543, 618
Hsp92I	GRCGYC	2 cut(s)	265, 618
Hsp92II	CATG	8 cut(s)	208, 307, 439, 532, 604, 849, 982, 1102
HspAI	GCGC	5 cut(s)	384, 627, 1031, 1054, 1202
KroI	GCCGGC	1 cut(s)	284
KroNI	GCCGGC	1 cut(s)	286
Ksp22I	TGATCA	1 cut(s)	1110
Kzo9I	GATC	5 cut(s)	63, 414, 789, 828, 1110
LmnI	GCTCC	4 cut(s)	150, 293, 485, 1160
Lsp1109I	GCAGC	4 cut(s)	230, 268, 776, 989
LweI	GCATC	2 cut(s)	162, 813
MaeI	CTAG	1 cut(s)	1121
MaeII	ACGT	4 cut(s)	138, 423, 543, 618
MaeIII	GTNAC	5 cut(s)	236, 353, 438, 700, 841
MalI	GATC	5 cut(s)	65, 416, 791, 830, 1112
MboI	GATC	5 cut(s)	63, 414, 789, 828, 1110
MboII	GAAGA	7 cut(s)	34, 37, 304, 388, 517, 640, 772
MfeI	CAATTG	1 cut(s)	81
MflI	RGATCY	3 cut(s)	414, 789, 828
MhlI	GDGCHC	5 cut(s)	172, 449, 460, 970, 1039
MlsI	TGGCCA	3 cut(s)	428, 533, 1097
MluCI	AATT	4 cut(s)	81, 98, 1017, 1072
MluNI	TGGCCA	3 cut(s)	428, 533, 1097
MlyI	GAGTC	1 cut(s)	350
MmeI	TCCRAC	1 cut(s)	507
Mox20I	TGGCCA	3 cut(s)	428, 533, 1097
MroNI	GCCGGC	1 cut(s)	284
MroXI	GAANNNNTTC	1 cut(s)	512
MscI	TGGCCA	3 cut(s)	428, 533, 1097
MseI	TTAA	1 cut(s)	1246
MslI	CAYNNNNRTG	1 cut(s)	398
Msp20I	TGGCCA	3 cut(s)	428, 533, 1097
MspA1I	CMGCKG	2 cut(s)	243, 1184
MspI	CCGG	8 cut(s)	90, 201, 285, 477, 561, 770, 963, 1158
MspR9I	CCNGG	4 cut(s)	166, 464, 548, 562
MunI	CAATTG	1 cut(s)	81
MvaI	CCWGG	3 cut(s)	166, 464, 548
MvnI	CGCG	4 cut(s)	384, 506, 863, 1033
MwoI	GCNNNNNNNGC	8 cut(s)	83, 124, 214, 252, 464, 1062, 1174, 1214
NaeI	GCCGGC	1 cut(s)	286
NciI	CCSGG	1 cut(s)	562
NcoI	CCATGG	1 cut(s)	303
NdeII	GATC	5 cut(s)	63, 414, 789, 828, 1110
NgoMIV	GCCGGC	1 cut(s)	284
NlaIII	CATG	8 cut(s)	208, 307, 439, 532, 604, 849, 982, 1102
NmeAIII	GCCGAG	3 cut(s)	129, 318, 951
NmuCI	GTSAC	4 cut(s)	236, 353, 700, 841
NspI	RCATGY	3 cut(s)	208, 439, 849
PaeI	GCATGC	1 cut(s)	208
PciI	ACATGT	1 cut(s)	435
PcsI	WCGNNNNNNNCGW	2 cut(s)	306, 396
PdiI	GCCGGC	1 cut(s)	286
PdmI	GAANNNNTTC	1 cut(s)	512
PfeI	GAWTC	2 cut(s)	93, 1024
PflFI	GACNNNGTC	1 cut(s)	267
PflMI	CCANNNNNTGG	1 cut(s)	1184
PinAI	ACCGGT	1 cut(s)	769
PkrI	GCNGC	8 cut(s)	88, 191, 245, 283, 331, 766, 1004, 1176
PleI	GAGTC	1 cut(s)	350
PpsI	GAGTC	1 cut(s)	350
PpuMI	RGGWCCY	1 cut(s)	564
PscI	ACATGT	1 cut(s)	435
Psp5II	RGGWCCY	1 cut(s)	564
Psp6I	CCWGG	3 cut(s)	164, 462, 546
PspGI	CCWGG	3 cut(s)	164, 462, 546
PspOMI	GGGCCC	1 cut(s)	445
PspPI	GGNCC	5 cut(s)	108, 191, 445, 446, 564
PspPPI	RGGWCCY	1 cut(s)	564
PsuI	RGATCY	3 cut(s)	414, 789, 828
PsyI	GACNNNGTC	1 cut(s)	267
RsaI	GTAC	1 cut(s)	914
RsaNI	GTAC	1 cut(s)	913
RseI	CAYNNNNRTG	1 cut(s)	398
SaqAI	TTAA	1 cut(s)	1246
SatI	GCNGC	8 cut(s)	87, 190, 244, 282, 330, 765, 1003, 1175
Sau3AI	GATC	5 cut(s)	63, 414, 789, 828, 1110
Sau96I	GGNCC	5 cut(s)	108, 191, 445, 446, 564
SchI	GAGTC	1 cut(s)	350
ScrFI	CCNGG	4 cut(s)	166, 464, 548, 562
SduI	GDGCHC	5 cut(s)	172, 449, 460, 970, 1039
SfaNI	GCATC	2 cut(s)	162, 813
SfcI	CTRYAG	1 cut(s)	812
SgrAI	CRCCGGYG	1 cut(s)	769
SinI	GGWCC	1 cut(s)	564
SmiMI	CAYNNNNRTG	1 cut(s)	398
SphI	GCATGC	1 cut(s)	208
Sse9I	AATT	4 cut(s)	81, 98, 1017, 1072
SspMI	CTAG	1 cut(s)	1121
StyD4I	CCNGG	4 cut(s)	164, 462, 546, 560
StyI	CCWWGG	4 cut(s)	303, 793, 948, 1039
TaaI	ACNGT	3 cut(s)	236, 882, 1105
TaiI	ACGT	4 cut(s)	141, 426, 546, 621
TaqI	TCGA	5 cut(s)	9, 363, 420, 885, 1135
TaqII	GACCGA	1 cut(s)	835
TasI	AATT	4 cut(s)	81, 98, 1017, 1072
TauI	GCSGC	4 cut(s)	89, 192, 332, 1177
TfiI	GAWTC	2 cut(s)	93, 1024
Tru1I	TTAA	1 cut(s)	1246
Tru9I	TTAA	1 cut(s)	1246
TscAI	CASTG	3 cut(s)	60, 241, 895
TseFI	GTSAC	4 cut(s)	236, 353, 700, 841
TseI	GCWGC	4 cut(s)	243, 281, 764, 1002
Tsp45I	GTSAC	4 cut(s)	236, 353, 700, 841
TspDTI	ATGAA	3 cut(s)	166, 265, 517
TspGWI	ACGGA	3 cut(s)	688, 719, 930
TspRI	CASTG	3 cut(s)	60, 241, 895
Tth111I	GACNNNGTC	1 cut(s)	267
Van91I	CCANNNNNTGG	1 cut(s)	1184
VpaK11BI	GGWCC	1 cut(s)	564
XceI	RCATGY	3 cut(s)	208, 439, 849
XmiI	GTMKAC	2 cut(s)	621, 1228
XmnI	GAANNNNTTC	1 cut(s)	512
XspI	CTAG	1 cut(s)	1121
ZraI	GACGTC	1 cut(s)	619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.