Rmu_sc0004226.1_g000016

Sucrose transport

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004226.1
Physical Location & Seq
Reverse (-)
48255 .. 50230
1976 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004226.1_g000016.1.cds

Sequence Viewer

Length: 1431 bp
atgaactcgccgacctcgccgaactcgccggaggcgtcaagcccgatgagtaggatagttctggtggcctctattggtgccggggtgcaattcggttgggcgttgcagctgtccttgctaacaccctacgtgcagcaactgggggtgccccacaaatgggcctccttcgtctggctgtgcgggcccctctccggtttactggtgcaacccatcgtgggttactatagcgaccgttgcacttctcgttttggtcgccgccgaccattcatagccgcgggtgctgcccttgtcgccatctccgtcttcctcattggatactccaaggacatcggcgtccgctccggcgattccttgggcaaacatacgaagccacgagccgtggttgtgtttgtgatcgggttttggatattggacgtggccaacaacatgttacaaggcccctgtcgcgctcttttggccgacatctccggttccgacacgaagaagatgagaacagccaatgccatgtactcattcttcatggctgtcggaaatgtgcttggctacgccgccggatcgttgaagaatctgcacaaggtgttccctttcaccacaaccaaagcctgtgatgtttactgcgcgaatcttaaaagctgttttttcatatccattgctctacttctgatactcaccgtgttggttatggtatccatacgtgagaaaacaattcctagtaacgataaaggtgagggaggagtgatgttcttcggacaaattatggttgcttttaaagagttgaagaagccgatgtggatcttgcttttggtgacttgcttgaactggattgcatggttcggcttcttattattcgacacagattggatggggaaagaggtctacggtggtacgatcgggaaagggagtctttacgacatgggagttagggctggttcacttgggctcatgctaaactctatcgtgttgggggttatgtctcttgggattatctacttggctcgtggggttaatggagctaaacaactctggggagtgatcaattttgtactagccatttgcctcctaatgacaatattggtcactaagttggctgagaagcatcgacatgcctgtgtcgtcgttggcggagctgagccgccgccgccgccccctgctggtatcaaggccggtgcattgcttatatttgctgtgttggggatacctctagcggtgacctacagcattccctttgctatggcctccatattttgcagcaactctggtggaggacaagtaagcggaccattagattctgctttcggaggtggaaacttaccggcgtttgtgttgggagccattgctgctgtaataagtggaatattggcaatgactgttctaccatctcctccagctgttcgtgaaactaatactattgtagctgctggcttccattaa

Protein Analysis

476

Amino Acids

50.45

Weight (kDa)

9.48

Isoelectric Point (pI)

34.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 332
AccB1I GGYRCC 2 cut(s) 77, 145
AccBSI CCGCTC 1 cut(s) 339
AccI GTMKAC 1 cut(s) 876
AccII CGCG 3 cut(s) 275, 447, 620
AclWI GGATC 2 cut(s) 562, 800
AcoI YGGCCR 2 cut(s) 417, 456
AcyI GRCGYC 2 cut(s) 35, 333
AdeI CACNNNGTG 1 cut(s) 577
AfaI GTAC 3 cut(s) 509, 886, 1044
AfiI CCNNNNNNNGG 6 cut(s) 156, 157, 171, 191, 215, 1151
AflIII ACRYGT 1 cut(s) 426
AgsI TTSAA 3 cut(s) 562, 778, 817
AjiI CACGTC 1 cut(s) 415
AluBI AGCT 6 cut(s) 109, 633, 1013, 1127, 1388, 1415
AluI AGCT 6 cut(s) 109, 633, 1013, 1127, 1388, 1415
Alw26I GTCTC 1 cut(s) 978
AlwI GGATC 2 cut(s) 562, 800
AlwNI CAGNNNCTG 1 cut(s) 139
AoxI GGCC 8 cut(s) 66, 159, 182, 417, 436, 456, 1161, 1233
ApaI GGGCCC 1 cut(s) 186
ApeKI GCWGC 6 cut(s) 106, 133, 281, 1248, 1337, 1415
AspLEI GCGC 2 cut(s) 449, 620
AspS9I GGNCC 5 cut(s) 159, 182, 183, 437, 1277
AsuC2I CCSGG 1 cut(s) 82
AsuHPI GGTGA 5 cut(s) 580, 661, 737, 817, 1219
AvaII GGWCC 1 cut(s) 1277
BaeGI GKGCMC 2 cut(s) 150, 186
BalI TGGCCA 1 cut(s) 419
BanI GGYRCC 2 cut(s) 77, 145
BanII GRGCYC 2 cut(s) 186, 942
BarI GAAGNNNNNNTAC 2 cut(s) 500, 532
BauI CACGAG 2 cut(s) 372, 996
BbsI GAAGAC 1 cut(s) 295
BbvI GCAGC 6 cut(s) 118, 145, 268, 1260, 1324, 1402
BccI CCATC 4 cut(s) 218, 302, 856, 1384
BceAI ACGGC 1 cut(s) 362
BciVI GTATCC 3 cut(s) 308, 697, 1188
BclI TGATCA 1 cut(s) 1032
BcnI CCSGG 1 cut(s) 82
BcoDI GTCTC 1 cut(s) 978
BfaI CTAG 3 cut(s) 711, 1046, 1202
BfmI CTRYAG 2 cut(s) 223, 1213
BfuI GTATCC 3 cut(s) 308, 697, 1188
BlpI GCTNAGC 1 cut(s) 1128
Bme1390I CCNGG 1 cut(s) 82
Bme18I GGWCC 1 cut(s) 1277
BmgBI CACGTC 1 cut(s) 415
BmgT120I GGNCC 5 cut(s) 159, 182, 183, 437, 1277
BmiI GGNNCC 7 cut(s) 79, 147, 184, 185, 439, 472, 1330
BmrFI CCNGG 1 cut(s) 82
BmrI ACTGGG 1 cut(s) 149
BmsI GCATC 1 cut(s) 1105
BmuI ACTGGG 1 cut(s) 149
BpiI GAAGAC 1 cut(s) 295
BpmI CTGGAG 1 cut(s) 1368
Bpu1102I GCTNAGC 1 cut(s) 1128
BpuMI CCSGG 1 cut(s) 82
BsaAI YACGTR 2 cut(s) 130, 695
BsaBI GATNNNNATC 1 cut(s) 791
BsaHI GRCGYC 2 cut(s) 35, 333
BsaJI CCNNGG 5 cut(s) 81, 273, 321, 351, 378
BsaWI WCCGGW 2 cut(s) 191, 467
BsaXI ACNNNNNCTCC 2 cut(s) 1254, 1284
Bsc4I CCNNNNNNNGG 6 cut(s) 156, 157, 171, 191, 215, 1151
Bse118I RCCGGY 2 cut(s) 1163, 1312
Bse1I ACTGG 3 cut(s) 144, 204, 824
Bse3DI GCAATG 4 cut(s) 648, 1169, 1332, 1368
Bse8I GATNNNNATC 1 cut(s) 791
BseDI CCNNGG 5 cut(s) 81, 273, 321, 351, 378
BseGI GGATG 1 cut(s) 867
BseJI GATNNNNATC 1 cut(s) 791
BseLI CCNNNNNNNGG 6 cut(s) 156, 157, 171, 191, 215, 1151
BseMI GCAATG 4 cut(s) 648, 1169, 1332, 1368
BseMII CTCAG 2 cut(s) 1080, 1119
BseNI ACTGG 3 cut(s) 144, 204, 824
BseRI GAGGAG 2 cut(s) 747, 1371
BseSI GKGCMC 2 cut(s) 150, 186
BseXI GCAGC 6 cut(s) 118, 145, 268, 1260, 1324, 1402
BsgI GTGCAG 2 cut(s) 152, 554
Bsh1236I CGCG 3 cut(s) 275, 447, 620
Bsh1285I CGRYCG 2 cut(s) 232, 891
BshFI GGCC 8 cut(s) 68, 161, 184, 419, 438, 458, 1163, 1235
BshNI GGYRCC 2 cut(s) 77, 145
BsiEI CGRYCG 2 cut(s) 232, 891
BsiSI CCGG 8 cut(s) 29, 81, 192, 342, 468, 552, 1164, 1313
BslI CCNNNNNNNGG 6 cut(s) 156, 157, 171, 191, 215, 1151
BsmAI GTCTC 1 cut(s) 978
BsmI GAATGC 1 cut(s) 1218
BsnI GGCC 8 cut(s) 68, 161, 184, 419, 438, 458, 1163, 1235
Bsp120I GGGCCC 1 cut(s) 182
Bsp1286I GDGCHC 3 cut(s) 150, 186, 942
Bsp143I GATC 5 cut(s) 393, 554, 792, 888, 1032
Bsp1720I GCTNAGC 1 cut(s) 1128
BspANI GGCC 8 cut(s) 68, 161, 184, 419, 438, 458, 1163, 1235
BspCNI CTCAG 2 cut(s) 1081, 1120
BspFNI CGCG 3 cut(s) 275, 447, 620
BspLI GGNNCC 7 cut(s) 79, 147, 184, 185, 439, 472, 1330
BspPI GGATC 2 cut(s) 562, 800
BspT107I GGYRCC 2 cut(s) 77, 145
BsrBI CCGCTC 1 cut(s) 339
BsrDI GCAATG 4 cut(s) 648, 1169, 1332, 1368
BsrFI RCCGGY 2 cut(s) 1163, 1312
BsrI ACTGG 3 cut(s) 144, 204, 824
BssAI RCCGGY 2 cut(s) 1163, 1312
BssECI CCNNGG 5 cut(s) 81, 273, 321, 351, 378
BssMI GATC 5 cut(s) 393, 554, 792, 888, 1032
BssNI GRCGYC 2 cut(s) 35, 333
BssSI CACGAG 2 cut(s) 372, 996
BssT1I CCWWGG 2 cut(s) 321, 351
Bst2BI CACGAG 2 cut(s) 372, 996
Bst4CI ACNGT 4 cut(s) 233, 673, 881, 1369
BstACI GRCGYC 2 cut(s) 35, 333
BstBAI YACGTR 2 cut(s) 130, 695
BstC8I GCNNGC 2 cut(s) 182, 1420
BstDEI CTNAG 3 cut(s) 1080, 1089, 1128
BstDSI CCRYGG 2 cut(s) 273, 378
BstEII GGTNACC 1 cut(s) 1207
BstF5I GGATG 1 cut(s) 867
BstFNI CGCG 3 cut(s) 275, 447, 620
BstHHI GCGC 2 cut(s) 449, 620
BstKTI GATC 5 cut(s) 396, 557, 795, 891, 1035
BstMAI GTCTC 1 cut(s) 978
BstMBI GATC 5 cut(s) 393, 554, 792, 888, 1032
BstMCI CGRYCG 2 cut(s) 232, 891
BstNSI RCATGY 2 cut(s) 430, 1106
BstPI GGTNACC 1 cut(s) 1207
BstSCI CCNGG 1 cut(s) 80
BstSFI CTRYAG 2 cut(s) 223, 1213
BstSLI GKGCMC 2 cut(s) 150, 186
BstUI CGCG 3 cut(s) 275, 447, 620
BstV1I GCAGC 6 cut(s) 118, 145, 268, 1260, 1324, 1402
BstV2I GAAGAC 1 cut(s) 295
BstX2I RGATCY 1 cut(s) 792
BstYI RGATCY 1 cut(s) 792
BsuI GTATCC 3 cut(s) 308, 697, 1188
BsuRI GGCC 8 cut(s) 68, 161, 184, 419, 438, 458, 1163, 1235
BtgI CCRYGG 2 cut(s) 273, 378
BtrI CACGTC 1 cut(s) 415
BtsCI GGATG 1 cut(s) 867
Cac8I GCNNGC 2 cut(s) 182, 1420
CaiI CAGNNNCTG 1 cut(s) 139
CfoI GCGC 2 cut(s) 449, 620
Cfr10I RCCGGY 2 cut(s) 1163, 1312
Cfr13I GGNCC 5 cut(s) 159, 182, 183, 437, 1277
Cfr42I CCGCGG 1 cut(s) 276
CseI GACGC 2 cut(s) 24, 322
Csp6I GTAC 3 cut(s) 508, 885, 1043
CspCI CAANNNNNGTGG 2 cut(s) 1240, 1275
CviAII CATG 7 cut(s) 427, 505, 520, 828, 913, 943, 1103
CviQI GTAC 3 cut(s) 508, 885, 1043
DdeI CTNAG 3 cut(s) 1080, 1089, 1128
DpnI GATC 5 cut(s) 395, 556, 794, 890, 1034
DpnII GATC 5 cut(s) 393, 554, 792, 888, 1032
DraI TTTAAA 1 cut(s) 769
DraIII CACNNNGTG 1 cut(s) 577
DrdI GACNNNNNNGTC 1 cut(s) 332
DseDI GACNNNNNNGTC 1 cut(s) 332
EaeI YGGCCR 2 cut(s) 417, 456
EciI GGCGGA 1 cut(s) 1137
Eco130I CCWWGG 2 cut(s) 321, 351
Eco24I GRGCYC 2 cut(s) 186, 942
Eco47I GGWCC 1 cut(s) 1277
Eco91I GGTNACC 1 cut(s) 1207
EcoO109I RGGNCCY 2 cut(s) 183, 437
EcoO65I GGTNACC 1 cut(s) 1207
EcoT14I CCWWGG 2 cut(s) 321, 351
EcoT38I GRGCYC 2 cut(s) 186, 942
ErhI CCWWGG 2 cut(s) 321, 351
FaeI CATG 7 cut(s) 430, 508, 523, 831, 916, 946, 1106
FalI AAGNNNNNCTT 2 cut(s) 888, 920
FatI CATG 7 cut(s) 426, 504, 519, 827, 912, 942, 1102
FauI CCCGC 2 cut(s) 173, 268
FbaI TGATCA 1 cut(s) 1032
FblI GTMKAC 1 cut(s) 876
FokI GGATG 1 cut(s) 874
FriOI GRGCYC 2 cut(s) 186, 942
FspBI CTAG 3 cut(s) 711, 1046, 1202
GlaI GCGC 2 cut(s) 448, 619
GsuI CTGGAG 1 cut(s) 1368
HaeIII GGCC 8 cut(s) 68, 161, 184, 419, 438, 458, 1163, 1235
HapII CCGG 8 cut(s) 29, 81, 192, 342, 468, 552, 1164, 1313
HgaI GACGC 2 cut(s) 24, 322
HhaI GCGC 2 cut(s) 449, 620
Hin1I GRCGYC 2 cut(s) 35, 333
Hin1II CATG 7 cut(s) 430, 508, 523, 831, 916, 946, 1106
Hin6I GCGC 2 cut(s) 447, 618
HinP1I GCGC 2 cut(s) 447, 618
HinfI GANTC 5 cut(s) 347, 565, 622, 901, 1286
HpaII CCGG 8 cut(s) 29, 81, 192, 342, 468, 552, 1164, 1313
HphI GGTGA 5 cut(s) 580, 661, 737, 817, 1219
Hpy166II GTNNAC 4 cut(s) 197, 613, 877, 932
Hpy188I TCNGA 5 cut(s) 475, 530, 663, 749, 1298
Hpy188III TCNNGA 2 cut(s) 892, 1394
Hpy8I GTNNAC 4 cut(s) 197, 613, 877, 932
Hpy99I CGWCG 1 cut(s) 1118
HpyAV CCTTC 1 cut(s) 175
HpyCH4III ACNGT 4 cut(s) 233, 673, 881, 1369
HpyCH4IV ACGT 3 cut(s) 129, 414, 694
HpyCH4V TGCA 9 cut(s) 88, 106, 133, 205, 237, 571, 827, 1169, 1248
HpyF3I CTNAG 3 cut(s) 1080, 1089, 1128
HpySE526I ACGT 3 cut(s) 129, 414, 694
Hsp92I GRCGYC 2 cut(s) 35, 333
Hsp92II CATG 7 cut(s) 430, 508, 523, 831, 916, 946, 1106
HspAI GCGC 2 cut(s) 447, 618
Ksp22I TGATCA 1 cut(s) 1032
KspI CCGCGG 1 cut(s) 276
Kzo9I GATC 5 cut(s) 393, 554, 792, 888, 1032
LmnI GCTCC 4 cut(s) 344, 1010, 1124, 1328
Lsp1109I GCAGC 6 cut(s) 118, 145, 268, 1260, 1324, 1402
LweI GCATC 1 cut(s) 1105
MaeI CTAG 3 cut(s) 711, 1046, 1202
MaeII ACGT 3 cut(s) 129, 414, 694
MaeIII GTNAC 6 cut(s) 218, 429, 713, 805, 1075, 1207
MalI GATC 5 cut(s) 395, 556, 794, 890, 1034
MbiI CCGCTC 1 cut(s) 339
MboI GATC 5 cut(s) 393, 554, 792, 888, 1032
MboII GAAGA 7 cut(s) 295, 493, 496, 508, 574, 736, 790
MflI RGATCY 1 cut(s) 792
MhlI GDGCHC 3 cut(s) 150, 186, 942
MlsI TGGCCA 1 cut(s) 419
MluCI AATT 4 cut(s) 89, 705, 753, 1036
MluNI TGGCCA 1 cut(s) 419
MlyI GAGTC 1 cut(s) 910
MmeI TCCRAC 2 cut(s) 498, 508
Mox20I TGGCCA 1 cut(s) 419
MscI TGGCCA 1 cut(s) 419
MseI TTAA 4 cut(s) 627, 768, 1005, 1429
MslI CAYNNNNRTG 2 cut(s) 1101, 1107
Msp20I TGGCCA 1 cut(s) 419
MspA1I CMGCKG 3 cut(s) 109, 275, 1388
MspI CCGG 8 cut(s) 29, 81, 192, 342, 468, 552, 1164, 1313
MspR9I CCNGG 1 cut(s) 82
Mva1269I GAATGC 1 cut(s) 1218
MvnI CGCG 3 cut(s) 275, 447, 620
NciI CCSGG 1 cut(s) 82
NdeII GATC 5 cut(s) 393, 554, 792, 888, 1032
NlaIII CATG 7 cut(s) 430, 508, 523, 831, 916, 946, 1106
NlaIV GGNNCC 7 cut(s) 79, 147, 184, 185, 439, 472, 1330
NmuCI GTSAC 3 cut(s) 805, 1075, 1207
NspI RCATGY 2 cut(s) 430, 1106
PciI ACATGT 1 cut(s) 426
PcsI WCGNNNNNNNCGW 2 cut(s) 32, 297
PctI GAATGC 1 cut(s) 1218
PfeI GAWTC 4 cut(s) 347, 565, 622, 1286
Ple19I CGATCG 1 cut(s) 891
PleI GAGTC 1 cut(s) 909
PpsI GAGTC 1 cut(s) 909
Ppu21I YACGTR 2 cut(s) 130, 695
PscI ACATGT 1 cut(s) 426
PspEI GGTNACC 1 cut(s) 1207
PspN4I GGNNCC 7 cut(s) 79, 147, 184, 185, 439, 472, 1330
PspOMI GGGCCC 1 cut(s) 182
PspPI GGNCC 5 cut(s) 159, 182, 183, 437, 1277
PstNI CAGNNNCTG 1 cut(s) 139
PsuI RGATCY 1 cut(s) 792
PvuI CGATCG 1 cut(s) 891
PvuII CAGCTG 2 cut(s) 109, 1388
RsaI GTAC 3 cut(s) 509, 886, 1044
RsaNI GTAC 3 cut(s) 508, 885, 1043
RseI CAYNNNNRTG 2 cut(s) 1101, 1107
SacII CCGCGG 1 cut(s) 276
SaqAI TTAA 4 cut(s) 627, 768, 1005, 1429
Sau3AI GATC 5 cut(s) 393, 554, 792, 888, 1032
Sau96I GGNCC 5 cut(s) 159, 182, 183, 437, 1277
SchI GAGTC 1 cut(s) 910
ScrFI CCNGG 1 cut(s) 82
SduI GDGCHC 3 cut(s) 150, 186, 942
SfaNI GCATC 1 cut(s) 1105
SfcI CTRYAG 2 cut(s) 223, 1213
Sfr303I CCGCGG 1 cut(s) 276
SgrBI CCGCGG 1 cut(s) 276
SinI GGWCC 1 cut(s) 1277
SmiMI CAYNNNNRTG 2 cut(s) 1101, 1107
Sse9I AATT 4 cut(s) 89, 705, 753, 1036
SspI AATATT 2 cut(s) 1071, 1356
SspMI CTAG 3 cut(s) 711, 1046, 1202
StyD4I CCNGG 1 cut(s) 80
StyI CCWWGG 2 cut(s) 321, 351
TaaI ACNGT 4 cut(s) 233, 673, 881, 1369
TaiI ACGT 3 cut(s) 132, 417, 697
TaqI TCGA 2 cut(s) 849, 1099
TasI AATT 4 cut(s) 89, 705, 753, 1036
TatI WGTACW 2 cut(s) 507, 1042
TauI GCSGC 7 cut(s) 258, 275, 551, 1135, 1138, 1141, 1144
TfiI GAWTC 4 cut(s) 347, 565, 622, 1286
Tru1I TTAA 4 cut(s) 627, 768, 1005, 1429
Tru9I TTAA 4 cut(s) 627, 768, 1005, 1429
TseFI GTSAC 3 cut(s) 805, 1075, 1207
TseI GCWGC 6 cut(s) 106, 133, 281, 1248, 1337, 1415
Tsp45I GTSAC 3 cut(s) 805, 1075, 1207
TspDTI ATGAA 4 cut(s) 17, 256, 508, 631
TspGWI ACGGA 1 cut(s) 289
VpaK11BI GGWCC 1 cut(s) 1277
XceI RCATGY 2 cut(s) 430, 1106
XmiI GTMKAC 1 cut(s) 876
XspI CTAG 3 cut(s) 711, 1046, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.