Rmu_sc0022725.1_g000003

Sucrose transport

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022725.1
Physical Location & Seq
Forward (+)
2302 .. 3612
1311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022725.1_g000003.1.cds

Sequence Viewer

Length: 1311 bp
atggaagttgatagggttaaatctccggagccgtcaagccctatatcaaagatagtgttggtagcctcaatcgcagccggagtacagttcggctgggcgcttcagctgtcgttgctgacgccgtacgtccagcaactgggggtcccacacaagtgggccgccgttgtctggctctgcggcccgatctcggggttgctggtgcaacccatcgtcggctactacagcgaccgcagcacatctcgtttcgggcgccgccgacctttcattgcaggcggggcagggcttgtcgccatcgccgttttcctgatcgggtacgccgccgacatcggagtccggtccggcgactcgttgcagaaatccacgaagccaagagccgtcgctgtctttgtggtggggttttgggttttagatgtggcgaataacatgctgcaaggcccatgtagggctctattggcggacctatccggctccgacagcaagaagatgagaacagcaaatgcgctctactcgttcttcatggccgtcggcaacgtcctggggtacgcggctggatcgctaaacgttcttcacaaggcatttccgttcaccatgaccaaggcatgcgacatttactgcgccaacctcaagagctgcttcttcctttcaatttttctgcttgtactactcactgtcttggccctaacgttagtgaaggaaacaccattcgagaaaaatgccgagggagcaggaggaggaggtctgttattgttcggtgaaatttttggtgcttttcgacagttgaagaagcccatgtggatccttcttctggtaacttgcatgaattgggtggcgtggttcggctttttactgtttgatactgactggatgggcaaggaagtttacggcggcgtcgtcggcaaaggacgtctttatgacatgggagtccgggcaggatcgcttggtctgatgctcaatgctatcgttttaggtgcaatgtcactggcaattgtttatttcgctagaggggttgatgggccgaaaaggatttggggagtagctaactttttcctagccatctgcctcctaatgacgatactggtaaccaaaatggccgagaaccatagacatgcgcacgccctagttggaggagccgagcagccgccgccgccgccaccgactggagttaaagctggtgcattgctcatattcgctctgttggggatcccgcaggctgtcaccttcagcattccgtttgcaatggcgtctattttctcgagtaactccggtgctggccaaggtaaaattttactcttcttttttctaattgagtaa

Protein Analysis

436

Amino Acids

46.73

Weight (kDa)

9.53

Isoelectric Point (pI)

34.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 329, 920
AatII GACGTC 1 cut(s) 907
Acc16I TGCGCA 1 cut(s) 1110
AccB1I GGYRCC 1 cut(s) 249
AccB7I CCANNNNNTGG 2 cut(s) 136, 1157
AccII CGCG 1 cut(s) 545
AccIII TCCGGA 1 cut(s) 25
AclI AACGTT 2 cut(s) 561, 683
AclWI GGATC 6 cut(s) 559, 790, 803, 940, 1195, 1208
AcoI YGGCCR 3 cut(s) 519, 1089, 1270
AcsI RAATTY 2 cut(s) 756, 1281
AcuI CTGAAG 2 cut(s) 86, 1204
AcyI GRCGYC 5 cut(s) 119, 250, 888, 904, 1241
AfaI GTAC 5 cut(s) 84, 125, 314, 542, 660
AfiI CCNNNNNNNGG 8 cut(s) 136, 168, 187, 188, 212, 442, 805, 1157
AgsI TTSAA 2 cut(s) 645, 781
AjnI CCWGG 1 cut(s) 534
AleI CACNNNNGTG 1 cut(s) 151
AluBI AGCT 4 cut(s) 106, 630, 1037, 1169
AluI AGCT 4 cut(s) 106, 630, 1037, 1169
AlwI GGATC 6 cut(s) 559, 790, 803, 940, 1195, 1208
AlwNI CAGNNNCTG 1 cut(s) 136
Ama87I CYCGRG 2 cut(s) 187, 1252
Aor13HI TCCGGA 1 cut(s) 25
AoxI GGCC 8 cut(s) 156, 178, 433, 519, 675, 1013, 1089, 1270
ApeKI GCWGC 5 cut(s) 74, 231, 427, 630, 1135
ApoI RAATTY 2 cut(s) 756, 1281
AspLEI GCGC 5 cut(s) 100, 252, 502, 617, 1111
AspS9I GGNCC 8 cut(s) 142, 156, 179, 336, 434, 457, 676, 1013
AsuC2I CCSGG 1 cut(s) 926
AsuHPI GGTGA 3 cut(s) 577, 764, 1207
AvaI CYCGRG 2 cut(s) 187, 1252
AvaII GGWCC 3 cut(s) 142, 336, 457
BalI TGGCCA 1 cut(s) 1272
BamHI GGATCC 2 cut(s) 795, 1200
BanI GGYRCC 1 cut(s) 249
BanII GRGCYC 1 cut(s) 448
BbvI GCAGC 5 cut(s) 86, 243, 414, 617, 1147
BccI CCATC 5 cut(s) 215, 299, 859, 1004, 1061
BceAI ACGGC 7 cut(s) 16, 106, 146, 281, 359, 506, 898
BcgI CGANNNNNNTGC 4 cut(s) 406, 440, 695, 729
BciT130I CCWGG 1 cut(s) 536
BcnI CCSGG 1 cut(s) 926
BfaI CTAG 3 cut(s) 999, 1049, 1118
BfmI CTRYAG 1 cut(s) 220
BfoI RGCGCY 2 cut(s) 101, 253
Bme1390I CCNGG 2 cut(s) 536, 926
Bme18I GGWCC 3 cut(s) 142, 336, 457
BmeT110I CYCGRG 2 cut(s) 187, 1252
BmgT120I GGNCC 8 cut(s) 142, 156, 179, 336, 434, 457, 676, 1013
BmiI GGNNCC 8 cut(s) 30, 143, 144, 251, 469, 797, 1129, 1202
BmrFI CCNGG 2 cut(s) 536, 926
BmrI ACTGGG 1 cut(s) 146
BmsI GCATC 1 cut(s) 936
BmuI ACTGGG 1 cut(s) 146
BpmI CTGGAG 1 cut(s) 1179
BpuEI CTTGAG 1 cut(s) 608
BpuMI CCSGG 1 cut(s) 926
BsaHI GRCGYC 5 cut(s) 119, 250, 888, 904, 1241
BsaJI CCNNGG 4 cut(s) 535, 594, 717, 1273
BsaWI WCCGGW 3 cut(s) 25, 333, 1262
Bsc4I CCNNNNNNNGG 8 cut(s) 136, 168, 187, 188, 212, 442, 805, 1157
Bse1I ACTGG 5 cut(s) 141, 866, 984, 1080, 1162
Bse3DI GCAATG 4 cut(s) 264, 978, 1175, 1242
BseAI TCCGGA 1 cut(s) 25
BseBI CCWGG 1 cut(s) 536
BseDI CCNNGG 4 cut(s) 535, 594, 717, 1273
BseGI GGATG 1 cut(s) 870
BseLI CCNNNNNNNGG 8 cut(s) 136, 168, 187, 188, 212, 442, 805, 1157
BseMI GCAATG 4 cut(s) 264, 978, 1175, 1242
BseNI ACTGG 5 cut(s) 141, 866, 984, 1080, 1162
BseRI GAGGAG 3 cut(s) 744, 747, 1140
BseXI GCAGC 5 cut(s) 86, 243, 414, 617, 1147
BseYI CCCAGC 1 cut(s) 93
Bsh1236I CGCG 1 cut(s) 545
Bsh1285I CGRYCG 1 cut(s) 229
BshFI GGCC 8 cut(s) 158, 180, 435, 521, 677, 1015, 1091, 1272
BshNI GGYRCC 1 cut(s) 249
BsiEI CGRYCG 1 cut(s) 229
BsiHKCI CYCGRG 2 cut(s) 187, 1252
BsiSI CCGG 7 cut(s) 26, 78, 334, 339, 465, 925, 1263
BsiWI CGTACG 1 cut(s) 123
BslFI GGGAC 1 cut(s) 128
BslI CCNNNNNNNGG 8 cut(s) 136, 168, 187, 188, 212, 442, 805, 1157
BsmFI GGGAC 1 cut(s) 128
BsmI GAATGC 1 cut(s) 1224
BsnI GGCC 8 cut(s) 158, 180, 435, 521, 677, 1015, 1091, 1272
BsoBI CYCGRG 2 cut(s) 187, 1252
Bsp1286I GDGCHC 1 cut(s) 448
Bsp13I TCCGGA 1 cut(s) 25
Bsp143I GATC 6 cut(s) 183, 306, 551, 795, 932, 1200
BspANI GGCC 8 cut(s) 158, 180, 435, 521, 677, 1015, 1091, 1272
BspEI TCCGGA 1 cut(s) 25
BspFNI CGCG 1 cut(s) 545
BspLI GGNNCC 8 cut(s) 30, 143, 144, 251, 469, 797, 1129, 1202
BspPI GGATC 6 cut(s) 559, 790, 803, 940, 1195, 1208
BspT107I GGYRCC 1 cut(s) 249
BsrDI GCAATG 4 cut(s) 264, 978, 1175, 1242
BsrI ACTGG 5 cut(s) 141, 866, 984, 1080, 1162
BssECI CCNNGG 4 cut(s) 535, 594, 717, 1273
BssMI GATC 6 cut(s) 183, 306, 551, 795, 932, 1200
BssNI GRCGYC 5 cut(s) 119, 250, 888, 904, 1241
BssT1I CCWWGG 2 cut(s) 594, 1273
Bst2UI CCWGG 1 cut(s) 536
Bst4CI ACNGT 4 cut(s) 87, 670, 777, 849
Bst6I CTCTTC 1 cut(s) 1295
BstACI GRCGYC 5 cut(s) 119, 250, 888, 904, 1241
BstC8I GCNNGC 5 cut(s) 271, 601, 1113, 1209, 1270
BstEII GGTNACC 1 cut(s) 1078
BstF5I GGATG 1 cut(s) 870
BstFNI CGCG 1 cut(s) 545
BstH2I RGCGCY 2 cut(s) 101, 253
BstHHI GCGC 5 cut(s) 100, 252, 502, 617, 1111
BstKTI GATC 6 cut(s) 186, 309, 554, 798, 935, 1203
BstMBI GATC 6 cut(s) 183, 306, 551, 795, 932, 1200
BstMCI CGRYCG 1 cut(s) 229
BstNI CCWGG 1 cut(s) 536
BstNSI RCATGY 3 cut(s) 427, 603, 1109
BstPI GGTNACC 1 cut(s) 1078
BstSCI CCNGG 2 cut(s) 534, 924
BstSFI CTRYAG 1 cut(s) 220
BstUI CGCG 1 cut(s) 545
BstV1I GCAGC 5 cut(s) 86, 243, 414, 617, 1147
BstX2I RGATCY 2 cut(s) 795, 1200
BstXI CCANNNNNNTGG 1 cut(s) 153
BstYI RGATCY 2 cut(s) 795, 1200
BsuRI GGCC 8 cut(s) 158, 180, 435, 521, 677, 1015, 1091, 1272
BtgZI GCGATG 1 cut(s) 277
BtsCI GGATG 1 cut(s) 870
BtsIMutI CAGTG 2 cut(s) 666, 977
Cac8I GCNNGC 5 cut(s) 271, 601, 1113, 1209, 1270
CaiI CAGNNNCTG 1 cut(s) 136
CfoI GCGC 5 cut(s) 100, 252, 502, 617, 1111
Cfr13I GGNCC 8 cut(s) 142, 156, 179, 336, 434, 457, 676, 1013
CpoI CGGWCCG 1 cut(s) 336
CseI GACGC 3 cut(s) 127, 877, 1230
Csp6I GTAC 5 cut(s) 83, 124, 313, 541, 659
CspI CGGWCCG 1 cut(s) 336
CviAII CATG 9 cut(s) 424, 438, 517, 589, 600, 790, 817, 916, 1106
CviQI GTAC 5 cut(s) 83, 124, 313, 541, 659
DinI GGCGCC 1 cut(s) 251
DpnI GATC 6 cut(s) 185, 308, 553, 797, 934, 1202
DpnII GATC 6 cut(s) 183, 306, 551, 795, 932, 1200
DrdI GACNNNNNNGTC 2 cut(s) 329, 920
DseDI GACNNNNNNGTC 2 cut(s) 329, 920
EaeI YGGCCR 3 cut(s) 519, 1089, 1270
Eam1104I CTCTTC 1 cut(s) 1295
EarI CTCTTC 1 cut(s) 1295
EciI GGCGGA 1 cut(s) 470
Eco130I CCWWGG 2 cut(s) 594, 1273
Eco24I GRGCYC 1 cut(s) 448
Eco47I GGWCC 3 cut(s) 142, 336, 457
Eco57I CTGAAG 2 cut(s) 86, 1204
Eco88I CYCGRG 2 cut(s) 187, 1252
Eco91I GGTNACC 1 cut(s) 1078
EcoO109I RGGNCCY 1 cut(s) 142
EcoO65I GGTNACC 1 cut(s) 1078
EcoRII CCWGG 1 cut(s) 534
EcoT14I CCWWGG 2 cut(s) 594, 1273
EcoT38I GRGCYC 1 cut(s) 448
EgeI GGCGCC 1 cut(s) 251
EheI GGCGCC 1 cut(s) 251
ErhI CCWWGG 2 cut(s) 594, 1273
FaeI CATG 9 cut(s) 427, 441, 520, 592, 603, 793, 820, 919, 1109
FalI AAGNNNNNCTT 4 cut(s) 617, 649, 891, 923
FaqI GGGAC 1 cut(s) 128
FatI CATG 9 cut(s) 423, 437, 516, 588, 599, 789, 816, 915, 1105
FauI CCCGC 2 cut(s) 266, 1212
FokI GGATG 1 cut(s) 877
FriOI GRGCYC 1 cut(s) 448
FspAI RTGCGCAY 1 cut(s) 1110
FspBI CTAG 3 cut(s) 999, 1049, 1118
FspI TGCGCA 1 cut(s) 1110
GlaI GCGC 5 cut(s) 99, 251, 501, 616, 1110
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 1 cut(s) 1179
HaeII RGCGCY 2 cut(s) 101, 253
HaeIII GGCC 8 cut(s) 158, 180, 435, 521, 677, 1015, 1091, 1272
HapII CCGG 7 cut(s) 26, 78, 334, 339, 465, 925, 1263
HgaI GACGC 3 cut(s) 127, 877, 1230
HhaI GCGC 5 cut(s) 100, 252, 502, 617, 1111
Hin1I GRCGYC 5 cut(s) 119, 250, 888, 904, 1241
Hin1II CATG 9 cut(s) 427, 441, 520, 592, 603, 793, 820, 919, 1109
Hin6I GCGC 5 cut(s) 98, 250, 500, 615, 1109
HinP1I GCGC 5 cut(s) 98, 250, 500, 615, 1109
HinfI GANTC 3 cut(s) 330, 344, 921
HpaII CCGG 7 cut(s) 26, 78, 334, 339, 465, 925, 1263
HphI GGTGA 3 cut(s) 577, 764, 1207
Hpy166II GTNNAC 2 cut(s) 585, 880
Hpy188I TCNGA 3 cut(s) 329, 472, 945
Hpy188III TCNNGA 5 cut(s) 26, 304, 625, 706, 1252
Hpy8I GTNNAC 2 cut(s) 585, 880
Hpy99I CGWCG 5 cut(s) 215, 380, 527, 893, 896
HpyAV CCTTC 3 cut(s) 685, 809, 1228
HpyCH4III ACNGT 4 cut(s) 87, 670, 777, 849
HpyCH4IV ACGT 5 cut(s) 126, 531, 561, 683, 904
HpyCH4V TGCA 8 cut(s) 202, 269, 352, 430, 816, 971, 1175, 1235
HpySE526I ACGT 5 cut(s) 126, 531, 561, 683, 904
Hsp92I GRCGYC 5 cut(s) 119, 250, 888, 904, 1241
Hsp92II CATG 9 cut(s) 427, 441, 520, 592, 603, 793, 820, 919, 1109
HspAI GCGC 5 cut(s) 98, 250, 500, 615, 1109
KasI GGCGCC 1 cut(s) 249
KflI GGGWCCC 1 cut(s) 142
Kpn2I TCCGGA 1 cut(s) 25
Kzo9I GATC 6 cut(s) 183, 306, 551, 795, 932, 1200
LmnI GCTCC 4 cut(s) 28, 473, 722, 1127
Lsp1109I GCAGC 5 cut(s) 86, 243, 414, 617, 1147
LweI GCATC 1 cut(s) 936
MaeI CTAG 3 cut(s) 999, 1049, 1118
MaeII ACGT 5 cut(s) 126, 531, 561, 683, 904
MaeIII GTNAC 5 cut(s) 808, 975, 1078, 1213, 1256
MalI GATC 6 cut(s) 185, 308, 553, 797, 934, 1202
MboI GATC 6 cut(s) 183, 306, 551, 795, 932, 1200
MboII GAAGA 7 cut(s) 493, 505, 557, 628, 793, 794, 1282
MfeI CAATTG 1 cut(s) 984
MflI RGATCY 2 cut(s) 795, 1200
MhlI GDGCHC 1 cut(s) 448
MlsI TGGCCA 1 cut(s) 1272
MluCI AATT 6 cut(s) 645, 756, 820, 984, 1281, 1302
MluNI TGGCCA 1 cut(s) 1272
Mly113I GGCGCC 1 cut(s) 250
MlyI GAGTC 3 cut(s) 338, 339, 930
MmeI TCCRAC 2 cut(s) 495, 1102
MnlI CCTC 9 cut(s) 76, 632, 712, 722, 725, 728, 995, 1070, 1118
Mox20I TGGCCA 1 cut(s) 1272
MroI TCCGGA 1 cut(s) 25
MscI TGGCCA 1 cut(s) 1272
MseI TTAA 2 cut(s) 18, 1164
MslI CAYNNNNRTG 2 cut(s) 151, 1104
Msp20I TGGCCA 1 cut(s) 1272
MspA1I CMGCKG 1 cut(s) 106
MspI CCGG 7 cut(s) 26, 78, 334, 339, 465, 925, 1263
MspR9I CCNGG 2 cut(s) 536, 926
MunI CAATTG 1 cut(s) 984
Mva1269I GAATGC 1 cut(s) 1224
MvaI CCWGG 1 cut(s) 536
MvnI CGCG 1 cut(s) 545
NarI GGCGCC 1 cut(s) 250
NciI CCSGG 1 cut(s) 926
NdeII GATC 6 cut(s) 183, 306, 551, 795, 932, 1200
NlaIII CATG 9 cut(s) 427, 441, 520, 592, 603, 793, 820, 919, 1109
NlaIV GGNNCC 8 cut(s) 30, 143, 144, 251, 469, 797, 1129, 1202
NmeAIII GCCGAG 3 cut(s) 742, 1117, 1156
NmuCI GTSAC 2 cut(s) 975, 1213
NsbI TGCGCA 1 cut(s) 1110
NspI RCATGY 3 cut(s) 427, 603, 1109
OliI CACNNNNGTG 1 cut(s) 151
PaeI GCATGC 1 cut(s) 603
PaeR7I CTCGAG 1 cut(s) 1252
PcsI WCGNNNNNNNCGW 2 cut(s) 294, 888
PctI GAATGC 1 cut(s) 1224
Pfl23II CGTACG 1 cut(s) 123
PflMI CCANNNNNTGG 2 cut(s) 136, 1157
PleI GAGTC 3 cut(s) 338, 338, 929
PluTI GGCGCC 1 cut(s) 253
PpsI GAGTC 3 cut(s) 338, 338, 929
PpuMI RGGWCCY 1 cut(s) 142
Psp1406I AACGTT 2 cut(s) 561, 683
Psp5II RGGWCCY 1 cut(s) 142
Psp6I CCWGG 1 cut(s) 534
PspEI GGTNACC 1 cut(s) 1078
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 1 cut(s) 534
PspLI CGTACG 1 cut(s) 123
PspN4I GGNNCC 8 cut(s) 30, 143, 144, 251, 469, 797, 1129, 1202
PspPI GGNCC 8 cut(s) 142, 156, 179, 336, 434, 457, 676, 1013
PspPPI RGGWCCY 1 cut(s) 142
PstNI CAGNNNCTG 1 cut(s) 136
PsuI RGATCY 2 cut(s) 795, 1200
PvuII CAGCTG 1 cut(s) 106
RsaI GTAC 5 cut(s) 84, 125, 314, 542, 660
RsaNI GTAC 5 cut(s) 83, 124, 313, 541, 659
RseI CAYNNNNRTG 2 cut(s) 151, 1104
Rsr2I CGGWCCG 1 cut(s) 336
RsrII CGGWCCG 1 cut(s) 336
SaqAI TTAA 2 cut(s) 18, 1164
Sau3AI GATC 6 cut(s) 183, 306, 551, 795, 932, 1200
Sau96I GGNCC 8 cut(s) 142, 156, 179, 336, 434, 457, 676, 1013
SchI GAGTC 3 cut(s) 338, 339, 930
ScrFI CCNGG 2 cut(s) 536, 926
SduI GDGCHC 1 cut(s) 448
SfaNI GCATC 1 cut(s) 936
SfcI CTRYAG 1 cut(s) 220
SfoI GGCGCC 1 cut(s) 251
Sfr274I CTCGAG 1 cut(s) 1252
SinI GGWCC 3 cut(s) 142, 336, 457
SlaI CTCGAG 1 cut(s) 1252
SmiMI CAYNNNNRTG 2 cut(s) 151, 1104
SmlI CTYRAG 2 cut(s) 623, 1252
SmoI CTYRAG 2 cut(s) 623, 1252
SphI GCATGC 1 cut(s) 603
Sse9I AATT 6 cut(s) 645, 756, 820, 984, 1281, 1302
SspDI GGCGCC 1 cut(s) 249
SspMI CTAG 3 cut(s) 999, 1049, 1118
StyD4I CCNGG 2 cut(s) 534, 924
StyI CCWWGG 2 cut(s) 594, 1273
TaaI ACNGT 4 cut(s) 87, 670, 777, 849
TaiI ACGT 5 cut(s) 129, 534, 564, 686, 907
TaqI TCGA 3 cut(s) 705, 772, 1253
TasI AATT 6 cut(s) 645, 756, 820, 984, 1281, 1302
TatI WGTACW 2 cut(s) 82, 658
Tru1I TTAA 2 cut(s) 18, 1164
Tru9I TTAA 2 cut(s) 18, 1164
TscAI CASTG 2 cut(s) 673, 984
TseFI GTSAC 2 cut(s) 975, 1213
TseI GCWGC 5 cut(s) 74, 231, 427, 630, 1135
Tsp45I GTSAC 2 cut(s) 975, 1213
TspDTI ATGAA 3 cut(s) 253, 505, 833
TspGWI ACGGA 2 cut(s) 570, 1218
TspRI CASTG 2 cut(s) 673, 984
Van91I CCANNNNNTGG 2 cut(s) 136, 1157
VpaK11BI GGWCC 3 cut(s) 142, 336, 457
XapI RAATTY 2 cut(s) 756, 1281
XceI RCATGY 3 cut(s) 427, 603, 1109
XhoI CTCGAG 1 cut(s) 1252
XspI CTAG 3 cut(s) 999, 1049, 1118
ZraI GACGTC 1 cut(s) 905
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.