Rh6CG425300

Sucrose transport

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
60802190 .. 60804166
1977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG425300.1

Sequence Viewer

Length: 1434 bp
ATGACCGTTGATACCATGAACTCGCCGAACTCGCCGGAGGCGTCAAGCCCGATGAGTAAGATAGTTCTGGTGGCCTCTATTGGTGCCGGGGTGCAATTCGGTTGGGCGTTGCAGCTGTCCTTGCTAACACCCTACGTGCAGCAACTGGGGGTGCCACACAAATGGGCCTCTTTCGTCTGGCTGTGCGGGCCCCTCTCCGGTTTACTGGTGCAACCCATCGTGGGTTACTATAGCGACCGTTGCACTTCTCGTTTTGGTCGCCGCCGACCGTTCATAGCCGCGGGTGCTGCCCTTGTCGCCATCTCCGTCTTCCTCATTGGATACTCCAAGGACATCGGCGTCCGCTCCGGCGATTCCTTGGACAAACATACGAAGCCACGAGCCATGGTTGTGTTTGTGATCGGGTTTTGGATATTGGACGTGGCCAACAACATGTTACAAGGCCCCTGTCGCGCTCTTTTGGCCGACATCTCCGGTTCCGACACGAAGAAGATGAGGACAGCCAATGCCATGTACTCATTCTTCATGGCTGTCGGAAATGTGCTTGGCTACGCCGCCGGATCGTTGAAGAATCTGCACAAGGTGTTCCCTTTCACCACAACCAAAGCCTGTGATGTTTACTGCGCGAATCTTAAAAGCTGTTTTTTCATATCCATTGCTCTACTTCTGATACTCACCGTGTTGGTTATGGTATCCATACGTGAGAAAACAATTCCTAGTAACGATAAAGGTGAGGGAGGAGTGATGTTCTTCGGACAAATTATGGTTGCTTTTAAACAGTTGAAGAAGCCGATGTGGATCTTGCTTTTGGTGACTTGCTTGAACTGGATTGCATGGTTCGGCTTCTTACTATTCGACACAGATTGGATGGGGAAAGAGGTCTACGGTGGTACGATCGGGAAAGGGAGTCTTTACGACATGGGAGTTAGGGCTGGTTCACTTGGGCTCATGCTAAACTCTATCGTGTTGGGGGTTATGTCTCTTGGGATTATCTACTTGGCTCGTGGGGTTAATGGAGCTAAACAACTCTGGGGAGTGATCAATTTTGTACTAGCCATTTGCCTCCTACTGACAATATTGGTCACTAAGTTGGCTGAGAAGCATCGACATGCCTGTGTCGTCGTTGGCGGAGCTGAGCCGCCGCCGCCCCCTGCTGGTATCAAGGCCGGTGCATTGCTTATATTTGCGGTGTTGGGGATACCTCTAGCGGTGACCTACAGCATTCCCTTTGCTATGGCCTCCATATTTTGCAGCAACTCTGGTGGAGGACAAGTAAGCGGACCATTAGATTCTGCTTTCGGAGGTGGAAACTTACCGGCGTTTGTGTTGGGAGCCATTGCTGCTATAACAAGTGGAATATTGGCAATGACTGTTCTACCATCTCCTCCAGCTGTTCGTGAAACTAATACTGTTGTAGCTGCTGGCTTCCATTAA

Protein Analysis

477

Amino Acids

50.64

Weight (kDa)

9.41

Isoelectric Point (pI)

32.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_2 PF13347 34 - 279 3.3e-13 MFS/sugar transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 338
AccB1I GGYRCC 2 cut(s) 83, 151
AccBSI CCGCTC 1 cut(s) 345
AccI GTMKAC 1 cut(s) 882
AccII CGCG 3 cut(s) 281, 453, 626
AclWI GGATC 2 cut(s) 568, 806
AcoI YGGCCR 2 cut(s) 423, 462
AcyI GRCGYC 2 cut(s) 41, 339
AdeI CACNNNGTG 1 cut(s) 583
AfaI GTAC 3 cut(s) 515, 892, 1050
AfiI CCNNNNNNNGG 3 cut(s) 197, 221, 1154
AflIII ACRYGT 1 cut(s) 432
AgsI TTSAA 3 cut(s) 568, 784, 823
AjiI CACGTC 1 cut(s) 421
AluBI AGCT 6 cut(s) 115, 639, 1019, 1133, 1391, 1418
AluI AGCT 6 cut(s) 115, 639, 1019, 1133, 1391, 1418
Alw26I GTCTC 1 cut(s) 984
AlwI GGATC 2 cut(s) 568, 806
AlwNI CAGNNNCTG 1 cut(s) 145
AoxI GGCC 8 cut(s) 72, 165, 188, 423, 442, 462, 1164, 1236
ApaI GGGCCC 1 cut(s) 192
ApeKI GCWGC 6 cut(s) 112, 139, 287, 1251, 1340, 1418
AspLEI GCGC 2 cut(s) 455, 626
AspS9I GGNCC 5 cut(s) 165, 188, 189, 443, 1280
AsuC2I CCSGG 1 cut(s) 88
AsuHPI GGTGA 5 cut(s) 586, 667, 743, 823, 1222
AvaII GGWCC 1 cut(s) 1280
BaeGI GKGCMC 1 cut(s) 192
BalI TGGCCA 1 cut(s) 425
BanI GGYRCC 2 cut(s) 83, 151
BanII GRGCYC 2 cut(s) 192, 948
BarI GAAGNNNNNNTAC 2 cut(s) 506, 538
BauI CACGAG 2 cut(s) 378, 1002
BbsI GAAGAC 1 cut(s) 301
BbvI GCAGC 6 cut(s) 124, 151, 274, 1263, 1327, 1405
BccI CCATC 4 cut(s) 224, 308, 862, 1387
BciVI GTATCC 3 cut(s) 314, 703, 1191
BclI TGATCA 1 cut(s) 1038
BcnI CCSGG 1 cut(s) 88
BcoDI GTCTC 1 cut(s) 984
BfaI CTAG 3 cut(s) 717, 1052, 1205
BfmI CTRYAG 2 cut(s) 229, 1216
BfuI GTATCC 3 cut(s) 314, 703, 1191
BlpI GCTNAGC 1 cut(s) 1134
Bme1390I CCNGG 1 cut(s) 88
Bme18I GGWCC 1 cut(s) 1280
BmgBI CACGTC 1 cut(s) 421
BmgT120I GGNCC 5 cut(s) 165, 188, 189, 443, 1280
BmiI GGNNCC 7 cut(s) 85, 153, 190, 191, 445, 478, 1333
BmrFI CCNGG 1 cut(s) 88
BmrI ACTGGG 1 cut(s) 155
BmsI GCATC 1 cut(s) 1111
BmuI ACTGGG 1 cut(s) 155
BpiI GAAGAC 1 cut(s) 301
BpmI CTGGAG 1 cut(s) 1371
Bpu1102I GCTNAGC 1 cut(s) 1134
BpuMI CCSGG 1 cut(s) 88
BsaAI YACGTR 2 cut(s) 136, 701
BsaBI GATNNNNATC 1 cut(s) 797
BsaHI GRCGYC 2 cut(s) 41, 339
BsaJI CCNNGG 5 cut(s) 87, 279, 327, 357, 384
BsaWI WCCGGW 2 cut(s) 197, 473
BsaXI ACNNNNNCTCC 2 cut(s) 1257, 1287
Bsc4I CCNNNNNNNGG 3 cut(s) 197, 221, 1154
Bse118I RCCGGY 2 cut(s) 1166, 1315
Bse1I ACTGG 3 cut(s) 150, 210, 830
Bse3DI GCAATG 4 cut(s) 654, 1172, 1335, 1371
Bse8I GATNNNNATC 1 cut(s) 797
BseDI CCNNGG 5 cut(s) 87, 279, 327, 357, 384
BseGI GGATG 1 cut(s) 873
BseJI GATNNNNATC 1 cut(s) 797
BseLI CCNNNNNNNGG 3 cut(s) 197, 221, 1154
BseMI GCAATG 4 cut(s) 654, 1172, 1335, 1371
BseMII CTCAG 2 cut(s) 1086, 1125
BseNI ACTGG 3 cut(s) 150, 210, 830
BseRI GAGGAG 2 cut(s) 753, 1374
BseSI GKGCMC 1 cut(s) 192
BseXI GCAGC 6 cut(s) 124, 151, 274, 1263, 1327, 1405
BsgI GTGCAG 2 cut(s) 158, 560
Bsh1236I CGCG 3 cut(s) 281, 453, 626
Bsh1285I CGRYCG 3 cut(s) 238, 269, 897
BshFI GGCC 8 cut(s) 74, 167, 190, 425, 444, 464, 1166, 1238
BshNI GGYRCC 2 cut(s) 83, 151
BsiEI CGRYCG 3 cut(s) 238, 269, 897
BsiSI CCGG 8 cut(s) 35, 87, 198, 348, 474, 558, 1167, 1316
BslI CCNNNNNNNGG 3 cut(s) 197, 221, 1154
BsmAI GTCTC 1 cut(s) 984
BsmI GAATGC 1 cut(s) 1221
BsnI GGCC 8 cut(s) 74, 167, 190, 425, 444, 464, 1166, 1238
Bsp120I GGGCCC 1 cut(s) 188
Bsp1286I GDGCHC 2 cut(s) 192, 948
Bsp143I GATC 5 cut(s) 399, 560, 798, 894, 1038
Bsp1720I GCTNAGC 1 cut(s) 1134
Bsp19I CCATGG 1 cut(s) 384
BspANI GGCC 8 cut(s) 74, 167, 190, 425, 444, 464, 1166, 1238
BspCNI CTCAG 2 cut(s) 1087, 1126
BspFNI CGCG 3 cut(s) 281, 453, 626
BspLI GGNNCC 7 cut(s) 85, 153, 190, 191, 445, 478, 1333
BspPI GGATC 2 cut(s) 568, 806
BspT107I GGYRCC 2 cut(s) 83, 151
BsrBI CCGCTC 1 cut(s) 345
BsrDI GCAATG 4 cut(s) 654, 1172, 1335, 1371
BsrFI RCCGGY 2 cut(s) 1166, 1315
BsrI ACTGG 3 cut(s) 150, 210, 830
BssAI RCCGGY 2 cut(s) 1166, 1315
BssECI CCNNGG 5 cut(s) 87, 279, 327, 357, 384
BssMI GATC 5 cut(s) 399, 560, 798, 894, 1038
BssNI GRCGYC 2 cut(s) 41, 339
BssSI CACGAG 2 cut(s) 378, 1002
BssT1I CCWWGG 3 cut(s) 327, 357, 384
Bst2BI CACGAG 2 cut(s) 378, 1002
Bst4CI ACNGT 8 cut(s) 7, 239, 270, 679, 780, 887, 1372, 1411
BstACI GRCGYC 2 cut(s) 41, 339
BstBAI YACGTR 2 cut(s) 136, 701
BstC8I GCNNGC 2 cut(s) 188, 1423
BstDEI CTNAG 3 cut(s) 1086, 1095, 1134
BstDSI CCRYGG 2 cut(s) 279, 384
BstEII GGTNACC 1 cut(s) 1210
BstF5I GGATG 1 cut(s) 873
BstFNI CGCG 3 cut(s) 281, 453, 626
BstHHI GCGC 2 cut(s) 455, 626
BstKTI GATC 5 cut(s) 402, 563, 801, 897, 1041
BstMAI GTCTC 1 cut(s) 984
BstMBI GATC 5 cut(s) 399, 560, 798, 894, 1038
BstMCI CGRYCG 3 cut(s) 238, 269, 897
BstNSI RCATGY 2 cut(s) 436, 1112
BstPI GGTNACC 1 cut(s) 1210
BstSCI CCNGG 1 cut(s) 86
BstSFI CTRYAG 2 cut(s) 229, 1216
BstSLI GKGCMC 1 cut(s) 192
BstUI CGCG 3 cut(s) 281, 453, 626
BstV1I GCAGC 6 cut(s) 124, 151, 274, 1263, 1327, 1405
BstV2I GAAGAC 1 cut(s) 301
BstX2I RGATCY 1 cut(s) 798
BstXI CCANNNNNNTGG 1 cut(s) 162
BstYI RGATCY 1 cut(s) 798
BsuI GTATCC 3 cut(s) 314, 703, 1191
BsuRI GGCC 8 cut(s) 74, 167, 190, 425, 444, 464, 1166, 1238
BtgI CCRYGG 2 cut(s) 279, 384
BtrI CACGTC 1 cut(s) 421
BtsCI GGATG 1 cut(s) 873
Cac8I GCNNGC 2 cut(s) 188, 1423
CaiI CAGNNNCTG 1 cut(s) 145
CfoI GCGC 2 cut(s) 455, 626
Cfr10I RCCGGY 2 cut(s) 1166, 1315
Cfr13I GGNCC 5 cut(s) 165, 188, 189, 443, 1280
Cfr42I CCGCGG 1 cut(s) 282
CseI GACGC 2 cut(s) 30, 328
Csp6I GTAC 3 cut(s) 514, 891, 1049
CspCI CAANNNNNGTGG 2 cut(s) 1243, 1278
CviAII CATG 9 cut(s) 16, 385, 433, 511, 526, 834, 919, 949, 1109
CviQI GTAC 3 cut(s) 514, 891, 1049
DdeI CTNAG 3 cut(s) 1086, 1095, 1134
DpnI GATC 5 cut(s) 401, 562, 800, 896, 1040
DpnII GATC 5 cut(s) 399, 560, 798, 894, 1038
DraI TTTAAA 1 cut(s) 775
DraIII CACNNNGTG 1 cut(s) 583
DrdI GACNNNNNNGTC 1 cut(s) 338
DseDI GACNNNNNNGTC 1 cut(s) 338
EaeI YGGCCR 2 cut(s) 423, 462
EciI GGCGGA 1 cut(s) 1143
Eco130I CCWWGG 3 cut(s) 327, 357, 384
Eco24I GRGCYC 2 cut(s) 192, 948
Eco47I GGWCC 1 cut(s) 1280
Eco91I GGTNACC 1 cut(s) 1210
EcoO109I RGGNCCY 2 cut(s) 189, 443
EcoO65I GGTNACC 1 cut(s) 1210
EcoT14I CCWWGG 3 cut(s) 327, 357, 384
EcoT38I GRGCYC 2 cut(s) 192, 948
ErhI CCWWGG 3 cut(s) 327, 357, 384
FaeI CATG 9 cut(s) 19, 388, 436, 514, 529, 837, 922, 952, 1112
FalI AAGNNNNNCTT 2 cut(s) 894, 926
FatI CATG 9 cut(s) 15, 384, 432, 510, 525, 833, 918, 948, 1108
FauI CCCGC 2 cut(s) 179, 274
FbaI TGATCA 1 cut(s) 1038
FblI GTMKAC 1 cut(s) 882
FokI GGATG 1 cut(s) 880
FriOI GRGCYC 2 cut(s) 192, 948
FspBI CTAG 3 cut(s) 717, 1052, 1205
GlaI GCGC 2 cut(s) 454, 625
GsuI CTGGAG 1 cut(s) 1371
HaeIII GGCC 8 cut(s) 74, 167, 190, 425, 444, 464, 1166, 1238
HapII CCGG 8 cut(s) 35, 87, 198, 348, 474, 558, 1167, 1316
HgaI GACGC 2 cut(s) 30, 328
HhaI GCGC 2 cut(s) 455, 626
Hin1I GRCGYC 2 cut(s) 41, 339
Hin1II CATG 9 cut(s) 19, 388, 436, 514, 529, 837, 922, 952, 1112
Hin6I GCGC 2 cut(s) 453, 624
HinP1I GCGC 2 cut(s) 453, 624
HinfI GANTC 5 cut(s) 353, 571, 628, 907, 1289
HpaII CCGG 8 cut(s) 35, 87, 198, 348, 474, 558, 1167, 1316
HphI GGTGA 5 cut(s) 586, 667, 743, 823, 1222
Hpy166II GTNNAC 4 cut(s) 203, 619, 883, 938
Hpy188I TCNGA 5 cut(s) 481, 536, 669, 755, 1301
Hpy188III TCNNGA 2 cut(s) 898, 1397
Hpy8I GTNNAC 4 cut(s) 203, 619, 883, 938
Hpy99I CGWCG 1 cut(s) 1124
HpyCH4III ACNGT 8 cut(s) 7, 239, 270, 679, 780, 887, 1372, 1411
HpyCH4IV ACGT 3 cut(s) 135, 420, 700
HpyCH4V TGCA 9 cut(s) 94, 112, 139, 211, 243, 577, 833, 1172, 1251
HpyF3I CTNAG 3 cut(s) 1086, 1095, 1134
HpySE526I ACGT 3 cut(s) 135, 420, 700
Hsp92I GRCGYC 2 cut(s) 41, 339
Hsp92II CATG 9 cut(s) 19, 388, 436, 514, 529, 837, 922, 952, 1112
HspAI GCGC 2 cut(s) 453, 624
Ksp22I TGATCA 1 cut(s) 1038
KspI CCGCGG 1 cut(s) 282
Kzo9I GATC 5 cut(s) 399, 560, 798, 894, 1038
LmnI GCTCC 4 cut(s) 350, 1016, 1130, 1331
Lsp1109I GCAGC 6 cut(s) 124, 151, 274, 1263, 1327, 1405
LweI GCATC 1 cut(s) 1111
MaeI CTAG 3 cut(s) 717, 1052, 1205
MaeII ACGT 3 cut(s) 135, 420, 700
MaeIII GTNAC 6 cut(s) 224, 435, 719, 811, 1081, 1210
MalI GATC 5 cut(s) 401, 562, 800, 896, 1040
MbiI CCGCTC 1 cut(s) 345
MboI GATC 5 cut(s) 399, 560, 798, 894, 1038
MboII GAAGA 7 cut(s) 301, 499, 502, 514, 580, 742, 796
MflI RGATCY 1 cut(s) 798
MhlI GDGCHC 2 cut(s) 192, 948
MlsI TGGCCA 1 cut(s) 425
MluCI AATT 4 cut(s) 95, 711, 759, 1042
MluNI TGGCCA 1 cut(s) 425
MlyI GAGTC 1 cut(s) 916
MmeI TCCRAC 2 cut(s) 504, 514
Mox20I TGGCCA 1 cut(s) 425
MscI TGGCCA 1 cut(s) 425
MseI TTAA 4 cut(s) 633, 774, 1011, 1432
MslI CAYNNNNRTG 4 cut(s) 160, 389, 1107, 1113
Msp20I TGGCCA 1 cut(s) 425
MspA1I CMGCKG 3 cut(s) 115, 281, 1391
MspI CCGG 8 cut(s) 35, 87, 198, 348, 474, 558, 1167, 1316
MspR9I CCNGG 1 cut(s) 88
Mva1269I GAATGC 1 cut(s) 1221
MvnI CGCG 3 cut(s) 281, 453, 626
NciI CCSGG 1 cut(s) 88
NcoI CCATGG 1 cut(s) 384
NdeII GATC 5 cut(s) 399, 560, 798, 894, 1038
NlaIII CATG 9 cut(s) 19, 388, 436, 514, 529, 837, 922, 952, 1112
NlaIV GGNNCC 7 cut(s) 85, 153, 190, 191, 445, 478, 1333
NmuCI GTSAC 3 cut(s) 811, 1081, 1210
NspI RCATGY 2 cut(s) 436, 1112
PciI ACATGT 1 cut(s) 432
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 303
PctI GAATGC 1 cut(s) 1221
PfeI GAWTC 4 cut(s) 353, 571, 628, 1289
Ple19I CGATCG 1 cut(s) 897
PleI GAGTC 1 cut(s) 915
PpsI GAGTC 1 cut(s) 915
Ppu21I YACGTR 2 cut(s) 136, 701
PscI ACATGT 1 cut(s) 432
PspEI GGTNACC 1 cut(s) 1210
PspN4I GGNNCC 7 cut(s) 85, 153, 190, 191, 445, 478, 1333
PspOMI GGGCCC 1 cut(s) 188
PspPI GGNCC 5 cut(s) 165, 188, 189, 443, 1280
PstNI CAGNNNCTG 1 cut(s) 145
PsuI RGATCY 1 cut(s) 798
PvuI CGATCG 1 cut(s) 897
PvuII CAGCTG 2 cut(s) 115, 1391
RsaI GTAC 3 cut(s) 515, 892, 1050
RsaNI GTAC 3 cut(s) 514, 891, 1049
RseI CAYNNNNRTG 4 cut(s) 160, 389, 1107, 1113
SacII CCGCGG 1 cut(s) 282
SaqAI TTAA 4 cut(s) 633, 774, 1011, 1432
Sau3AI GATC 5 cut(s) 399, 560, 798, 894, 1038
Sau96I GGNCC 5 cut(s) 165, 188, 189, 443, 1280
SchI GAGTC 1 cut(s) 916
ScrFI CCNGG 1 cut(s) 88
SduI GDGCHC 2 cut(s) 192, 948
SfaNI GCATC 1 cut(s) 1111
SfcI CTRYAG 2 cut(s) 229, 1216
Sfr303I CCGCGG 1 cut(s) 282
SgrBI CCGCGG 1 cut(s) 282
SinI GGWCC 1 cut(s) 1280
SmiMI CAYNNNNRTG 4 cut(s) 160, 389, 1107, 1113
Sse9I AATT 4 cut(s) 95, 711, 759, 1042
SspI AATATT 2 cut(s) 1077, 1359
SspMI CTAG 3 cut(s) 717, 1052, 1205
StyD4I CCNGG 1 cut(s) 86
StyI CCWWGG 3 cut(s) 327, 357, 384
TaaI ACNGT 8 cut(s) 7, 239, 270, 679, 780, 887, 1372, 1411
TaiI ACGT 3 cut(s) 138, 423, 703
TaqI TCGA 2 cut(s) 855, 1105
TasI AATT 4 cut(s) 95, 711, 759, 1042
TatI WGTACW 2 cut(s) 513, 1048
TauI GCSGC 6 cut(s) 264, 281, 557, 1141, 1144, 1147
TfiI GAWTC 4 cut(s) 353, 571, 628, 1289
Tru1I TTAA 4 cut(s) 633, 774, 1011, 1432
Tru9I TTAA 4 cut(s) 633, 774, 1011, 1432
TseFI GTSAC 3 cut(s) 811, 1081, 1210
TseI GCWGC 6 cut(s) 112, 139, 287, 1251, 1340, 1418
Tsp45I GTSAC 3 cut(s) 811, 1081, 1210
TspDTI ATGAA 4 cut(s) 32, 262, 514, 637
TspGWI ACGGA 1 cut(s) 295
VpaK11BI GGWCC 1 cut(s) 1280
XceI RCATGY 2 cut(s) 436, 1112
XmiI GTMKAC 1 cut(s) 882
XspI CTAG 3 cut(s) 717, 1052, 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.