Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0001365

Physical Location & Seq

Genomic Coordinates Forward (+)

59672895 .. 59676701

Gene Structure 3807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG410500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGGAAGTTGATAGGGTTAAATCTCCGGAGCCGTCAAGCCCTATATCAAAGATAGTGTTGGTAGCCTCAATCGCAGCCGGAGTACAGTTCGGCTGGGCGCTTCAGCTGTCGTTGCTGACGCCGTACGTCCAGCAACTGGGGGTCCCACACAAGTGGGCCGCCGTTGTCTGGCTCTGCGGCCCGATCTCGGGGTTGCTGGTGCAACCCATCGTCGGCTACTACAGCGACCGCAGCACATCTCGTTTCGGGCGCCGCCGACCTTTCATTGCCGGCGGGGCAGGGCTTGTCGCCATCGCCGTTTTCCTGATCGGGTACGCCGCCGACATCGGCGTCCGGTCCGGCGACTCGTTGCAGAAATCCACGAAGCCAAGAGCCGTCGCTGTCTTTGTGGTGGGGTTTTGGGTTTTAGATGTGGCGAATAACATGCTGCAAGGCCCATGTAGGGCTCTACTGGCGGATCTATCGGGCTCCGACAGCAAGAAGATGAGGACAGCAAATGCGCTCTACTCGTTCTTCATGGCCGTCGGCAACGTCCTGGGGTACGCGGCTGGATCGCTAAGCGTTCTTCACAAGGCTTTTCCATTCACCATGACCAAAGCATGCGACATTTACTGCGCCAACCTCAAGAGCTGCTTCTTCCTTTCAATTTTTCTGCTTGTGCTACTCACTGTCTTGGCCCTAACGTTAGTGAAGGAAACACCATTCGAGAAAAATGCTGAGGGAGCAGGAGGAGGAGGTCTGTTATTGTTCGGTGAAATTTTTGGTGCTTTTCGACAGTTGAAGAAGCCCATGTGGATCCTTCTTCTGGTAACTTGCATGAATTGGGTGGCGTGGTTCGGCTTTTTACTGTTTGATACTGACTGGATGGGCAAGGAAGTTTTCGGCGGCGTCGTCGGCAAAGGACGTCTTTATGACATGGGAGTCCGGGCGGGATCGCTTGGTCTGATGCTCAATGCTATCGTTTTAGGTGCAATGTCACTCGCAATTGTTTATTTCGCTAGAGGGGTTGATGGGCCGAAAAGGATTTGGGGAGTAGCTAACTTTTTCCTAGCCATCTGCCTCCTAATGACGATACTGGTAACCAAAATGGCCGAGAACCATAGACATGCGCACGCCCTAGTTGGAGGAGCCGAGCCGCCGCCGCCACCGACTGGAGTTAAAGCTGGTGCATTGCTCATATTCGCTATGTTGGGGATCCCGCAGGCTGTCACCTTCAGCATTCCGTTTGCAATGGCGTCTATTTTCTCGAGTAACTCCGGTGCTGGCCAAGGGCTTTCCCTGGGAGTATTGAATATATCAATTGTCGTACCACAGATGTTTGTGTCGGTTATAAGTGGACCCCTAGATGCTTCTTTTGGCGGAGGGAACTTACCGGCTTTTGTCCTCGGAGCTGTTGCAGCAGTAATTAGTGGAATCCTTGCTTTGACTGTTTTGCCATCTCCTCCGCCCGATCAGGCTAATCAAACTGTTCTACCTGCTGGATTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008506 GO:0008515 GO:0008643 GO:0009669 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015154 GO:0015157 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015766 GO:0015770 GO:0015772 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0098655 GO:0098660 GO:0098662 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_2

Protein Analysis

496

Amino Acids

52.33

Weight (kDa)

9.42

Isoelectric Point (pI)

35.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_2	PF13347	30 - 279	6.4e-11	MFS/sugar transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22710 AT1G66570 AT1G66570 AT1G66570 AT2G14670 AT5G06170 AT5G43610
fragaria_vesca	FvH4_2g12320 FvH4_2g12320 FvH4_2g12320 FvH4_2g22550 FvH4_2g40110 FvH4_2g40120
malus_domestica	MD05G1040000.v1.1 MD10G1045900.v1.1 MD12G1059700.v1.1
prunus_persica	Prupe.8G052700_v2.0.a1
pyrus_communis	pycom05g03270 pycom10g03210
rosa_chinensis	RchiOBHm_Chr6g0272341 RchiOBHm_Chr6g0300591 RchiOBHm_Chr6g0300631
rosa_laevigata	RLG00000011315 RLG00000011321 RLG00000013682
rosa_multiflora	Rmu_sc0004226.1_g000016 Rmu_sc0004226.1_g000019 Rmu_sc0009379.1_g000001 Rmu_sc0009424.1_g000002 Rmu_sc0022725.1_g000003 Rmu_sc0032937.1_g000001
rosa_roxburghii	Rroxscaffold_7G00167570 Rroxscaffold_7G00167610 Rroxscaffold_7G00196420
rosa_rugosa	Rorug06G0068000 Rorug06G0068100 Rorug06G0297700 Rorug06G0297800 Rorug06G0297800
rosa_samantha	Rh6AG184300 Rh6AG410300 Rh6AG410600 Rh6BG187600 Rh6BG417400 Rh6CG185700 Rh6CG425000 Rh6CG425300 Rh6DG177500 Rh6DG410500
rosa_wichuraiana	Rw6G015890 Rw6G015930 Rw6G035880 Rw6G035920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1331
AasI	GACNNNNNNGTC	2 cut(s)	329, 920
AatII	GACGTC	1 cut(s)	907
Acc16I	TGCGCA	1 cut(s)	1110
Acc36I	ACCTGC	1 cut(s)	1483
AccB1I	GGYRCC	1 cut(s)	249
AccB7I	CCANNNNNTGG	2 cut(s)	136, 1151
AccII	CGCG	1 cut(s)	545
AccIII	TCCGGA	1 cut(s)	25
AclI	AACGTT	1 cut(s)	683
AclWI	GGATC	7 cut(s)	465, 559, 790, 803, 940, 1189, 1202
AcoI	YGGCCR	3 cut(s)	519, 1089, 1264
AcsI	RAATTY	1 cut(s)	756
AcuI	CTGAAG	2 cut(s)	86, 1198
AcyI	GRCGYC	6 cut(s)	119, 250, 330, 888, 904, 1235
AfaI	GTAC	5 cut(s)	84, 125, 314, 542, 1308
AfiI	CCNNNNNNNGG	8 cut(s)	136, 168, 187, 188, 212, 442, 805, 1151
AgsI	TTSAA	3 cut(s)	645, 781, 1291
AjnI	CCWGG	2 cut(s)	534, 1278
AleI	CACNNNNGTG	1 cut(s)	151
AluBI	AGCT	5 cut(s)	106, 630, 1037, 1163, 1391
AluI	AGCT	5 cut(s)	106, 630, 1037, 1163, 1391
AlwI	GGATC	7 cut(s)	465, 559, 790, 803, 940, 1189, 1202
AlwNI	CAGNNNCTG	1 cut(s)	136
Ama87I	CYCGRG	2 cut(s)	187, 1246
Aor13HI	TCCGGA	1 cut(s)	25
AoxI	GGCC	8 cut(s)	156, 178, 433, 519, 675, 1013, 1089, 1264
ApeKI	GCWGC	5 cut(s)	74, 231, 427, 630, 1397
ApoI	RAATTY	1 cut(s)	756
AspLEI	GCGC	5 cut(s)	100, 252, 502, 617, 1111
AspS9I	GGNCC	8 cut(s)	142, 156, 179, 336, 434, 676, 1013, 1337
AsuC2I	CCSGG	1 cut(s)	926
AsuHPI	GGTGA	3 cut(s)	577, 764, 1201
AvaI	CYCGRG	2 cut(s)	187, 1246
AvaII	GGWCC	3 cut(s)	142, 336, 1337
BalI	TGGCCA	1 cut(s)	1266
BamHI	GGATCC	2 cut(s)	795, 1194
BanI	GGYRCC	1 cut(s)	249
BanII	GRGCYC	2 cut(s)	448, 470
BbvCI	CCTCAGC	1 cut(s)	717
BbvI	GCAGC	5 cut(s)	86, 243, 414, 617, 1409
BccI	CCATC	6 cut(s)	215, 299, 859, 1004, 1061, 1444
BceAI	ACGGC	6 cut(s)	16, 106, 146, 281, 359, 506
BcgI	CGANNNNNNTGC	4 cut(s)	406, 440, 695, 729
BciT130I	CCWGG	2 cut(s)	536, 1280
BcnI	CCSGG	1 cut(s)	926
BfaI	CTAG	4 cut(s)	999, 1049, 1118, 1343
BfmI	CTRYAG	1 cut(s)	220
BfoI	RGCGCY	2 cut(s)	101, 253
BfuAI	ACCTGC	1 cut(s)	1483
BglI	GCCNNNNNGGC	1 cut(s)	275
BlpI	GCTNAGC	1 cut(s)	557
Bme1390I	CCNGG	3 cut(s)	536, 926, 1280
Bme18I	GGWCC	3 cut(s)	142, 336, 1337
BmeT110I	CYCGRG	2 cut(s)	187, 1246
BmgT120I	GGNCC	8 cut(s)	142, 156, 179, 336, 434, 676, 1013, 1337
BmiI	GGNNCC	9 cut(s)	30, 143, 144, 251, 469, 797, 1129, 1196, 1339
BmrFI	CCNGG	3 cut(s)	536, 926, 1280
BmrI	ACTGGG	1 cut(s)	146
BmsI	GCATC	2 cut(s)	936, 1336
BmuI	ACTGGG	1 cut(s)	146
BpmI	CTGGAG	1 cut(s)	1173
Bpu10I	CCTNAGC	1 cut(s)	717
Bpu1102I	GCTNAGC	1 cut(s)	557
BpuEI	CTTGAG	1 cut(s)	608
BpuMI	CCSGG	1 cut(s)	926
BsaHI	GRCGYC	6 cut(s)	119, 250, 330, 888, 904, 1235
BsaJI	CCNNGG	5 cut(s)	535, 1267, 1278, 1279, 1384
BsaWI	WCCGGW	3 cut(s)	25, 333, 1256
Bsc4I	CCNNNNNNNGG	8 cut(s)	136, 168, 187, 188, 212, 442, 805, 1151
Bse118I	RCCGGY	2 cut(s)	269, 1372
Bse1I	ACTGG	5 cut(s)	141, 456, 866, 1080, 1156
Bse3DI	GCAATG	4 cut(s)	264, 978, 1169, 1236
BseAI	TCCGGA	1 cut(s)	25
BseBI	CCWGG	2 cut(s)	536, 1280
BseDI	CCNNGG	5 cut(s)	535, 1267, 1278, 1279, 1384
BseGI	GGATG	1 cut(s)	870
BseLI	CCNNNNNNNGG	8 cut(s)	136, 168, 187, 188, 212, 442, 805, 1151
BseMI	GCAATG	4 cut(s)	264, 978, 1169, 1236
BseMII	CTCAG	1 cut(s)	708
BseNI	ACTGG	5 cut(s)	141, 456, 866, 1080, 1156
BseRI	GAGGAG	4 cut(s)	744, 747, 1140, 1431
BseXI	GCAGC	5 cut(s)	86, 243, 414, 617, 1409
BseYI	CCCAGC	1 cut(s)	93
Bsh1236I	CGCG	1 cut(s)	545
Bsh1285I	CGRYCG	1 cut(s)	229
BshFI	GGCC	8 cut(s)	158, 180, 435, 521, 677, 1015, 1091, 1266
BshNI	GGYRCC	1 cut(s)	249
BsiEI	CGRYCG	1 cut(s)	229
BsiHKCI	CYCGRG	2 cut(s)	187, 1246
BsiSI	CCGG	8 cut(s)	26, 78, 270, 334, 339, 925, 1257, 1373
BsiWI	CGTACG	1 cut(s)	123
BslFI	GGGAC	1 cut(s)	128
BslI	CCNNNNNNNGG	8 cut(s)	136, 168, 187, 188, 212, 442, 805, 1151
BsmFI	GGGAC	1 cut(s)	128
BsmI	GAATGC	1 cut(s)	1218
BsnI	GGCC	8 cut(s)	158, 180, 435, 521, 677, 1015, 1091, 1266
BsoBI	CYCGRG	2 cut(s)	187, 1246
Bsp1286I	GDGCHC	2 cut(s)	448, 470
Bsp13I	TCCGGA	1 cut(s)	25
Bsp143I	GATC	8 cut(s)	183, 306, 457, 551, 795, 932, 1194, 1450
Bsp1720I	GCTNAGC	1 cut(s)	557
BspANI	GGCC	8 cut(s)	158, 180, 435, 521, 677, 1015, 1091, 1266
BspCNI	CTCAG	1 cut(s)	709
BspEI	TCCGGA	1 cut(s)	25
BspFNI	CGCG	1 cut(s)	545
BspLI	GGNNCC	9 cut(s)	30, 143, 144, 251, 469, 797, 1129, 1196, 1339
BspMI	ACCTGC	1 cut(s)	1483
BspPI	GGATC	7 cut(s)	465, 559, 790, 803, 940, 1189, 1202
BspT107I	GGYRCC	1 cut(s)	249
BsrDI	GCAATG	4 cut(s)	264, 978, 1169, 1236
BsrFI	RCCGGY	2 cut(s)	269, 1372
BsrI	ACTGG	5 cut(s)	141, 456, 866, 1080, 1156
BssAI	RCCGGY	2 cut(s)	269, 1372
BssECI	CCNNGG	5 cut(s)	535, 1267, 1278, 1279, 1384
BssMI	GATC	8 cut(s)	183, 306, 457, 551, 795, 932, 1194, 1450
BssNI	GRCGYC	6 cut(s)	119, 250, 330, 888, 904, 1235
BssT1I	CCWWGG	1 cut(s)	1267
Bst2UI	CCWGG	2 cut(s)	536, 1280
Bst4CI	ACNGT	6 cut(s)	87, 670, 777, 849, 1429, 1468
BstACI	GRCGYC	6 cut(s)	119, 250, 330, 888, 904, 1235
BstC8I	GCNNGC	5 cut(s)	271, 601, 1113, 1203, 1264
BstDEI	CTNAG	2 cut(s)	557, 717
BstEII	GGTNACC	1 cut(s)	1078
BstF5I	GGATG	1 cut(s)	870
BstFNI	CGCG	1 cut(s)	545
BstH2I	RGCGCY	2 cut(s)	101, 253
BstHHI	GCGC	5 cut(s)	100, 252, 502, 617, 1111
BstKTI	GATC	8 cut(s)	186, 309, 460, 554, 798, 935, 1197, 1453
BstMBI	GATC	8 cut(s)	183, 306, 457, 551, 795, 932, 1194, 1450
BstMCI	CGRYCG	1 cut(s)	229
BstNI	CCWGG	2 cut(s)	536, 1280
BstNSI	RCATGY	3 cut(s)	427, 603, 1109
BstPI	GGTNACC	1 cut(s)	1078
BstSCI	CCNGG	3 cut(s)	534, 924, 1278
BstSFI	CTRYAG	1 cut(s)	220
BstUI	CGCG	1 cut(s)	545
BstV1I	GCAGC	5 cut(s)	86, 243, 414, 617, 1409
BstX2I	RGATCY	3 cut(s)	457, 795, 1194
BstXI	CCANNNNNNTGG	1 cut(s)	153
BstYI	RGATCY	3 cut(s)	457, 795, 1194
BsuRI	GGCC	8 cut(s)	158, 180, 435, 521, 677, 1015, 1091, 1266
BtgZI	GCGATG	1 cut(s)	277
BtsCI	GGATG	1 cut(s)	870
BtsIMutI	CAGTG	1 cut(s)	666
BveI	ACCTGC	1 cut(s)	1483
Cac8I	GCNNGC	5 cut(s)	271, 601, 1113, 1203, 1264
CaiI	CAGNNNCTG	1 cut(s)	136
CfoI	GCGC	5 cut(s)	100, 252, 502, 617, 1111
Cfr10I	RCCGGY	2 cut(s)	269, 1372
Cfr13I	GGNCC	8 cut(s)	142, 156, 179, 336, 434, 676, 1013, 1337
CpoI	CGGWCCG	1 cut(s)	336
CseI	GACGC	4 cut(s)	127, 319, 877, 1224
Csp6I	GTAC	5 cut(s)	83, 124, 313, 541, 1307
CspI	CGGWCCG	1 cut(s)	336
CviAII	CATG	9 cut(s)	424, 438, 517, 589, 600, 790, 817, 916, 1106
CviQI	GTAC	5 cut(s)	83, 124, 313, 541, 1307
DdeI	CTNAG	2 cut(s)	557, 717
DinI	GGCGCC	1 cut(s)	251
DpnI	GATC	8 cut(s)	185, 308, 459, 553, 797, 934, 1196, 1452
DpnII	GATC	8 cut(s)	183, 306, 457, 551, 795, 932, 1194, 1450
DrdI	GACNNNNNNGTC	2 cut(s)	329, 920
DseDI	GACNNNNNNGTC	2 cut(s)	329, 920
EaeI	YGGCCR	3 cut(s)	519, 1089, 1264
EciI	GGCGGA	3 cut(s)	470, 1374, 1434
Eco130I	CCWWGG	1 cut(s)	1267
Eco24I	GRGCYC	2 cut(s)	448, 470
Eco47I	GGWCC	3 cut(s)	142, 336, 1337
Eco57I	CTGAAG	2 cut(s)	86, 1198
Eco88I	CYCGRG	2 cut(s)	187, 1246
Eco91I	GGTNACC	1 cut(s)	1078
EcoO109I	RGGNCCY	1 cut(s)	142
EcoO65I	GGTNACC	1 cut(s)	1078
EcoRII	CCWGG	2 cut(s)	534, 1278
EcoT14I	CCWWGG	1 cut(s)	1267
EcoT38I	GRGCYC	2 cut(s)	448, 470
EgeI	GGCGCC	1 cut(s)	251
EheI	GGCGCC	1 cut(s)	251
ErhI	CCWWGG	1 cut(s)	1267
FaeI	CATG	9 cut(s)	427, 441, 520, 592, 603, 793, 820, 919, 1109
FalI	AAGNNNNNCTT	4 cut(s)	617, 649, 891, 923
FaqI	GGGAC	1 cut(s)	128
FatI	CATG	9 cut(s)	423, 437, 516, 588, 599, 789, 816, 915, 1105
FauI	CCCGC	3 cut(s)	266, 922, 1206
FokI	GGATG	1 cut(s)	877
FriOI	GRGCYC	2 cut(s)	448, 470
FspAI	RTGCGCAY	1 cut(s)	1110
FspBI	CTAG	4 cut(s)	999, 1049, 1118, 1343
FspI	TGCGCA	1 cut(s)	1110
GlaI	GCGC	5 cut(s)	99, 251, 501, 616, 1110
GsaI	CCCAGC	1 cut(s)	97
GsuI	CTGGAG	1 cut(s)	1173
HaeII	RGCGCY	2 cut(s)	101, 253
HaeIII	GGCC	8 cut(s)	158, 180, 435, 521, 677, 1015, 1091, 1266
HapII	CCGG	8 cut(s)	26, 78, 270, 334, 339, 925, 1257, 1373
HgaI	GACGC	4 cut(s)	127, 319, 877, 1224
HhaI	GCGC	5 cut(s)	100, 252, 502, 617, 1111
Hin1I	GRCGYC	6 cut(s)	119, 250, 330, 888, 904, 1235
Hin1II	CATG	9 cut(s)	427, 441, 520, 592, 603, 793, 820, 919, 1109
Hin6I	GCGC	5 cut(s)	98, 250, 500, 615, 1109
HinP1I	GCGC	5 cut(s)	98, 250, 500, 615, 1109
HinfI	GANTC	3 cut(s)	344, 921, 1413
HpaII	CCGG	8 cut(s)	26, 78, 270, 334, 339, 925, 1257, 1373
HphI	GGTGA	3 cut(s)	577, 764, 1201
Hpy166II	GTNNAC	1 cut(s)	1337
Hpy188I	TCNGA	3 cut(s)	472, 945, 1388
Hpy188III	TCNNGA	5 cut(s)	26, 304, 625, 706, 1246
Hpy8I	GTNNAC	1 cut(s)	1337
Hpy99I	CGWCG	5 cut(s)	215, 380, 527, 893, 896
HpyAV	CCTTC	3 cut(s)	685, 809, 1222
HpyCH4III	ACNGT	6 cut(s)	87, 670, 777, 849, 1429, 1468
HpyCH4IV	ACGT	4 cut(s)	126, 531, 683, 904
HpyCH4V	TGCA	8 cut(s)	202, 352, 430, 816, 971, 1169, 1229, 1397
HpyF3I	CTNAG	2 cut(s)	557, 717
HpySE526I	ACGT	4 cut(s)	126, 531, 683, 904
Hsp92I	GRCGYC	6 cut(s)	119, 250, 330, 888, 904, 1235
Hsp92II	CATG	9 cut(s)	427, 441, 520, 592, 603, 793, 820, 919, 1109
HspAI	GCGC	5 cut(s)	98, 250, 500, 615, 1109
KasI	GGCGCC	1 cut(s)	249
KflI	GGGWCCC	1 cut(s)	142
Kpn2I	TCCGGA	1 cut(s)	25
KroI	GCCGGC	1 cut(s)	269
KroNI	GCCGGC	1 cut(s)	271
Kzo9I	GATC	8 cut(s)	183, 306, 457, 551, 795, 932, 1194, 1450
LmnI	GCTCC	5 cut(s)	28, 473, 722, 1127, 1388
Lsp1109I	GCAGC	5 cut(s)	86, 243, 414, 617, 1409
LweI	GCATC	2 cut(s)	936, 1336
MaeI	CTAG	4 cut(s)	999, 1049, 1118, 1343
MaeII	ACGT	4 cut(s)	126, 531, 683, 904
MaeIII	GTNAC	5 cut(s)	808, 975, 1078, 1207, 1250
MalI	GATC	8 cut(s)	185, 308, 459, 553, 797, 934, 1196, 1452
MboI	GATC	8 cut(s)	183, 306, 457, 551, 795, 932, 1194, 1450
MboII	GAAGA	6 cut(s)	493, 505, 557, 628, 793, 794
MfeI	CAATTG	2 cut(s)	984, 1299
MflI	RGATCY	3 cut(s)	457, 795, 1194
MhlI	GDGCHC	2 cut(s)	448, 470
MlsI	TGGCCA	1 cut(s)	1266
MluCI	AATT	6 cut(s)	645, 756, 820, 984, 1299, 1404
MluNI	TGGCCA	1 cut(s)	1266
Mly113I	GGCGCC	1 cut(s)	250
MlyI	GAGTC	2 cut(s)	338, 930
MmeI	TCCRAC	2 cut(s)	495, 1102
Mox20I	TGGCCA	1 cut(s)	1266
MroI	TCCGGA	1 cut(s)	25
MroNI	GCCGGC	1 cut(s)	269
MscI	TGGCCA	1 cut(s)	1266
MseI	TTAA	2 cut(s)	18, 1158
MslI	CAYNNNNRTG	2 cut(s)	151, 1104
Msp20I	TGGCCA	1 cut(s)	1266
MspA1I	CMGCKG	1 cut(s)	106
MspI	CCGG	8 cut(s)	26, 78, 270, 334, 339, 925, 1257, 1373
MspR9I	CCNGG	3 cut(s)	536, 926, 1280
MunI	CAATTG	2 cut(s)	984, 1299
Mva1269I	GAATGC	1 cut(s)	1218
MvaI	CCWGG	2 cut(s)	536, 1280
MvnI	CGCG	1 cut(s)	545
NaeI	GCCGGC	1 cut(s)	271
NarI	GGCGCC	1 cut(s)	250
NciI	CCSGG	1 cut(s)	926
NdeII	GATC	8 cut(s)	183, 306, 457, 551, 795, 932, 1194, 1450
NgoMIV	GCCGGC	1 cut(s)	269
NlaIII	CATG	9 cut(s)	427, 441, 520, 592, 603, 793, 820, 919, 1109
NlaIV	GGNNCC	9 cut(s)	30, 143, 144, 251, 469, 797, 1129, 1196, 1339
NmeAIII	GCCGAG	2 cut(s)	1117, 1156
NmuCI	GTSAC	2 cut(s)	975, 1207
NsbI	TGCGCA	1 cut(s)	1110
NspI	RCATGY	3 cut(s)	427, 603, 1109
OliI	CACNNNNGTG	1 cut(s)	151
PaeI	GCATGC	1 cut(s)	603
PaeR7I	CTCGAG	1 cut(s)	1246
PasI	CCCWGGG	1 cut(s)	1279
PcsI	WCGNNNNNNNCGW	2 cut(s)	294, 888
PctI	GAATGC	1 cut(s)	1218
PdiI	GCCGGC	1 cut(s)	271
PfeI	GAWTC	1 cut(s)	1413
Pfl23II	CGTACG	1 cut(s)	123
PflMI	CCANNNNNTGG	2 cut(s)	136, 1151
PleI	GAGTC	2 cut(s)	338, 929
PluTI	GGCGCC	1 cut(s)	253
PpsI	GAGTC	2 cut(s)	338, 929
PpuMI	RGGWCCY	1 cut(s)	142
PsiI	TTATAA	1 cut(s)	1331
Psp1406I	AACGTT	1 cut(s)	683
Psp5II	RGGWCCY	1 cut(s)	142
Psp6I	CCWGG	2 cut(s)	534, 1278
PspEI	GGTNACC	1 cut(s)	1078
PspFI	CCCAGC	1 cut(s)	93
PspGI	CCWGG	2 cut(s)	534, 1278
PspLI	CGTACG	1 cut(s)	123
PspN4I	GGNNCC	9 cut(s)	30, 143, 144, 251, 469, 797, 1129, 1196, 1339
PspPI	GGNCC	8 cut(s)	142, 156, 179, 336, 434, 676, 1013, 1337
PspPPI	RGGWCCY	1 cut(s)	142
PstNI	CAGNNNCTG	1 cut(s)	136
PsuI	RGATCY	3 cut(s)	457, 795, 1194
PvuII	CAGCTG	1 cut(s)	106
RsaI	GTAC	5 cut(s)	84, 125, 314, 542, 1308
RsaNI	GTAC	5 cut(s)	83, 124, 313, 541, 1307
RseI	CAYNNNNRTG	2 cut(s)	151, 1104
Rsr2I	CGGWCCG	1 cut(s)	336
RsrII	CGGWCCG	1 cut(s)	336
SaqAI	TTAA	2 cut(s)	18, 1158
Sau3AI	GATC	8 cut(s)	183, 306, 457, 551, 795, 932, 1194, 1450
Sau96I	GGNCC	8 cut(s)	142, 156, 179, 336, 434, 676, 1013, 1337
SchI	GAGTC	2 cut(s)	338, 930
ScrFI	CCNGG	3 cut(s)	536, 926, 1280
SduI	GDGCHC	2 cut(s)	448, 470
SfaNI	GCATC	2 cut(s)	936, 1336
SfcI	CTRYAG	1 cut(s)	220
SfoI	GGCGCC	1 cut(s)	251
Sfr274I	CTCGAG	1 cut(s)	1246
SinI	GGWCC	3 cut(s)	142, 336, 1337
SlaI	CTCGAG	1 cut(s)	1246
SmiMI	CAYNNNNRTG	2 cut(s)	151, 1104
SmlI	CTYRAG	2 cut(s)	623, 1246
SmoI	CTYRAG	2 cut(s)	623, 1246
SphI	GCATGC	1 cut(s)	603
Sse9I	AATT	6 cut(s)	645, 756, 820, 984, 1299, 1404
SspDI	GGCGCC	1 cut(s)	249
SspMI	CTAG	4 cut(s)	999, 1049, 1118, 1343
StyD4I	CCNGG	3 cut(s)	534, 924, 1278
StyI	CCWWGG	1 cut(s)	1267
TaaI	ACNGT	6 cut(s)	87, 670, 777, 849, 1429, 1468
TaiI	ACGT	4 cut(s)	129, 534, 686, 907
TaqI	TCGA	3 cut(s)	705, 772, 1247
TasI	AATT	6 cut(s)	645, 756, 820, 984, 1299, 1404
TatI	WGTACW	1 cut(s)	82
TauI	GCSGC	9 cut(s)	161, 180, 255, 320, 548, 888, 1138, 1141, 1144
TfiI	GAWTC	1 cut(s)	1413
Tru1I	TTAA	2 cut(s)	18, 1158
Tru9I	TTAA	2 cut(s)	18, 1158
TscAI	CASTG	1 cut(s)	673
TseFI	GTSAC	2 cut(s)	975, 1207
TseI	GCWGC	5 cut(s)	74, 231, 427, 630, 1397
Tsp45I	GTSAC	2 cut(s)	975, 1207
TspDTI	ATGAA	4 cut(s)	253, 505, 833, 1475
TspGWI	ACGGA	1 cut(s)	1212
TspRI	CASTG	1 cut(s)	673
Van91I	CCANNNNNTGG	2 cut(s)	136, 1151
VpaK11BI	GGWCC	3 cut(s)	142, 336, 1337
XapI	RAATTY	1 cut(s)	756
XceI	RCATGY	3 cut(s)	427, 603, 1109
XhoI	CTCGAG	1 cut(s)	1246
XspI	CTAG	4 cut(s)	999, 1049, 1118, 1343
ZraI	GACGTC	1 cut(s)	905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.