Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MatE | PF01554 | 131 - 279 | 1.9e-13 | MatE |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 151 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 416 |
| Acc36I | ACCTGC | 1 cut(s) | 151 |
| Acc65I | GGTACC | 1 cut(s) | 1375 |
| AccB1I | GGYRCC | 1 cut(s) | 1375 |
| AccBSI | CCGCTC | 1 cut(s) | 1476 |
| AccII | CGCG | 2 cut(s) | 176, 237 |
| AciI | CCGC | 9 cut(s) | 174, 207, 235, 237, 278, 366, 550, 1476, 1642 |
| AclWI | GGATC | 2 cut(s) | 679, 1455 |
| AcoI | YGGCCR | 2 cut(s) | 603, 1437 |
| AcuI | CTGAAG | 2 cut(s) | 957, 1650 |
| AcyI | GRCGYC | 2 cut(s) | 187, 1403 |
| AfaI | GTAC | 4 cut(s) | 849, 1008, 1147, 1377 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 371, 372 |
| AgsI | TTSAA | 4 cut(s) | 510, 522, 805, 1130 |
| AjnI | CCWGG | 3 cut(s) | 226, 460, 791 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1291, 1323 |
| AluBI | AGCT | 6 cut(s) | 29, 435, 445, 861, 941, 1268 |
| AluI | AGCT | 6 cut(s) | 29, 435, 445, 861, 941, 1268 |
| Alw21I | GWGCWC | 1 cut(s) | 1498 |
| Alw26I | GTCTC | 1 cut(s) | 407 |
| Alw44I | GTGCAC | 1 cut(s) | 1494 |
| AlwI | GGATC | 2 cut(s) | 679, 1455 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 325 |
| Ama87I | CYCGRG | 1 cut(s) | 1193 |
| AoxI | GGCC | 5 cut(s) | 388, 457, 603, 734, 1437 |
| ApaI | GGGCCC | 1 cut(s) | 461 |
| ApaLI | GTGCAC | 1 cut(s) | 1494 |
| AseI | ATTAAT | 1 cut(s) | 1394 |
| Asp718I | GGTACC | 1 cut(s) | 1375 |
| AspLEI | GCGC | 2 cut(s) | 178, 541 |
| AspS9I | GGNCC | 5 cut(s) | 362, 389, 457, 458, 797 |
| AsuHPI | GGTGA | 5 cut(s) | 23, 91, 125, 854, 1169 |
| AsuII | TTCGAA | 1 cut(s) | 1647 |
| AvaI | CYCGRG | 1 cut(s) | 1193 |
| AvaII | GGWCC | 2 cut(s) | 362, 797 |
| AxyI | CCTNAGG | 1 cut(s) | 1489 |
| BaeGI | GKGCMC | 4 cut(s) | 461, 655, 1498, 1555 |
| BalI | TGGCCA | 1 cut(s) | 605 |
| BanI | GGYRCC | 1 cut(s) | 1375 |
| BanII | GRGCYC | 1 cut(s) | 461 |
| Bbv12I | GWGCWC | 1 cut(s) | 1498 |
| BccI | CCATC | 2 cut(s) | 115, 242 |
| BceAI | ACGGC | 4 cut(s) | 200, 812, 1613, 1630 |
| BciT130I | CCWGG | 3 cut(s) | 228, 462, 793 |
| BciVI | GTATCC | 1 cut(s) | 950 |
| BclI | TGATCA | 2 cut(s) | 1339, 1347 |
| BcoDI | GTCTC | 1 cut(s) | 407 |
| BfaI | CTAG | 2 cut(s) | 311, 546 |
| BfmI | CTRYAG | 1 cut(s) | 816 |
| BfuAI | ACCTGC | 1 cut(s) | 151 |
| BfuI | GTATCC | 1 cut(s) | 950 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 184 |
| BlpI | GCTNAGC | 1 cut(s) | 1534 |
| BmcAI | AGTACT | 1 cut(s) | 1008 |
| Bme1390I | CCNGG | 3 cut(s) | 228, 462, 793 |
| Bme18I | GGWCC | 2 cut(s) | 362, 797 |
| BmeT110I | CYCGRG | 1 cut(s) | 1193 |
| BmgT120I | GGNCC | 5 cut(s) | 362, 389, 457, 458, 797 |
| BmiI | GGNNCC | 4 cut(s) | 364, 459, 798, 1377 |
| BmrFI | CCNGG | 3 cut(s) | 228, 462, 793 |
| BmrI | ACTGGG | 1 cut(s) | 381 |
| BmsI | GCATC | 3 cut(s) | 253, 1350, 1469 |
| BmuI | ACTGGG | 1 cut(s) | 381 |
| BpmI | CTGGAG | 1 cut(s) | 249 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1534 |
| Bpu14I | TTCGAA | 1 cut(s) | 1647 |
| BpuEI | CTTGAG | 3 cut(s) | 1229, 1442, 1646 |
| BsaHI | GRCGYC | 2 cut(s) | 187, 1403 |
| BsaJI | CCNNGG | 8 cut(s) | 158, 235, 453, 460, 792, 990, 1104, 1310 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 138, 168 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 371, 372 |
| Bse1I | ACTGG | 7 cut(s) | 102, 376, 606, 673, 822, 1560, 1567 |
| Bse21I | CCTNAGG | 1 cut(s) | 1489 |
| Bse3DI | GCAATG | 2 cut(s) | 220, 1430 |
| BseBI | CCWGG | 3 cut(s) | 228, 462, 793 |
| BseDI | CCNNGG | 8 cut(s) | 158, 235, 453, 460, 792, 990, 1104, 1310 |
| BseGI | GGATG | 4 cut(s) | 170, 342, 986, 1484 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 371, 372 |
| BseMI | GCAATG | 2 cut(s) | 220, 1430 |
| BseMII | CTCAG | 4 cut(s) | 216, 255, 776, 1465 |
| BseNI | ACTGG | 7 cut(s) | 102, 376, 606, 673, 822, 1560, 1567 |
| BseRI | GAGGAG | 3 cut(s) | 27, 41, 1539 |
| BseSI | GKGCMC | 4 cut(s) | 461, 655, 1498, 1555 |
| BsgI | GTGCAG | 5 cut(s) | 129, 723, 877, 906, 1161 |
| Bsh1236I | CGCG | 2 cut(s) | 176, 237 |
| BshFI | GGCC | 5 cut(s) | 390, 459, 605, 736, 1439 |
| BshNI | GGYRCC | 1 cut(s) | 1375 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1498 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1193 |
| BsiSI | CCGG | 1 cut(s) | 1440 |
| BslFI | GGGAC | 1 cut(s) | 269 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 371, 372 |
| BsmAI | GTCTC | 1 cut(s) | 407 |
| BsmFI | GGGAC | 1 cut(s) | 269 |
| BsmI | GAATGC | 2 cut(s) | 1242, 1562 |
| BsnI | GGCC | 5 cut(s) | 390, 459, 605, 736, 1439 |
| BsoBI | CYCGRG | 1 cut(s) | 1193 |
| Bsp119I | TTCGAA | 1 cut(s) | 1647 |
| Bsp120I | GGGCCC | 1 cut(s) | 457 |
| Bsp1286I | GDGCHC | 4 cut(s) | 461, 655, 1498, 1555 |
| Bsp143I | GATC | 4 cut(s) | 671, 1339, 1347, 1447 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1534 |
| Bsp19I | CCATGG | 2 cut(s) | 158, 1104 |
| BspACI | CCGC | 9 cut(s) | 174, 207, 235, 237, 278, 366, 550, 1476, 1642 |
| BspANI | GGCC | 5 cut(s) | 390, 459, 605, 736, 1439 |
| BspCNI | CTCAG | 4 cut(s) | 215, 254, 775, 1464 |
| BspFNI | CGCG | 2 cut(s) | 176, 237 |
| BspHI | TCATGA | 1 cut(s) | 1122 |
| BspLI | GGNNCC | 4 cut(s) | 364, 459, 798, 1377 |
| BspMI | ACCTGC | 1 cut(s) | 151 |
| BspPI | GGATC | 2 cut(s) | 679, 1455 |
| BspT104I | TTCGAA | 1 cut(s) | 1647 |
| BspT107I | GGYRCC | 1 cut(s) | 1375 |
| BsrBI | CCGCTC | 1 cut(s) | 1476 |
| BsrDI | GCAATG | 2 cut(s) | 220, 1430 |
| BsrI | ACTGG | 7 cut(s) | 102, 376, 606, 673, 822, 1560, 1567 |
| BssECI | CCNNGG | 8 cut(s) | 158, 235, 453, 460, 792, 990, 1104, 1310 |
| BssMI | GATC | 4 cut(s) | 671, 1339, 1347, 1447 |
| BssNI | GRCGYC | 2 cut(s) | 187, 1403 |
| BssT1I | CCWWGG | 5 cut(s) | 158, 453, 990, 1104, 1310 |
| Bst2UI | CCWGG | 3 cut(s) | 228, 462, 793 |
| Bst4CI | ACNGT | 4 cut(s) | 415, 469, 1006, 1150 |
| BstACI | GRCGYC | 2 cut(s) | 187, 1403 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 659, 737, 1369 |
| BstBI | TTCGAA | 1 cut(s) | 1647 |
| BstC8I | GCNNGC | 6 cut(s) | 211, 447, 543, 738, 1437, 1540 |
| BstDEI | CTNAG | 6 cut(s) | 202, 241, 762, 1451, 1489, 1534 |
| BstDSI | CCRYGG | 3 cut(s) | 158, 235, 1104 |
| BstF5I | GGATG | 4 cut(s) | 170, 342, 986, 1484 |
| BstFNI | CGCG | 2 cut(s) | 176, 237 |
| BstHHI | GCGC | 2 cut(s) | 178, 541 |
| BstKTI | GATC | 4 cut(s) | 674, 1342, 1350, 1450 |
| BstMAI | GTCTC | 1 cut(s) | 407 |
| BstMBI | GATC | 4 cut(s) | 671, 1339, 1347, 1447 |
| BstNI | CCWGG | 3 cut(s) | 228, 462, 793 |
| BstNSI | RCATGY | 1 cut(s) | 1144 |
| BstSCI | CCNGG | 3 cut(s) | 226, 460, 791 |
| BstSFI | CTRYAG | 1 cut(s) | 816 |
| BstSLI | GKGCMC | 4 cut(s) | 461, 655, 1498, 1555 |
| BstUI | CGCG | 2 cut(s) | 176, 237 |
| BstX2I | RGATCY | 1 cut(s) | 1447 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 227 |
| BstYI | RGATCY | 1 cut(s) | 1447 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1489 |
| BsuI | GTATCC | 1 cut(s) | 950 |
| BsuRI | GGCC | 5 cut(s) | 390, 459, 605, 736, 1439 |
| BtgI | CCRYGG | 3 cut(s) | 158, 235, 1104 |
| BtsCI | GGATG | 4 cut(s) | 170, 342, 986, 1484 |
| BtsI | GCAGTG | 3 cut(s) | 357, 534, 1496 |
| BtsIMutI | CAGTG | 8 cut(s) | 357, 369, 534, 613, 829, 1496, 1553, 1574 |
| BveI | ACCTGC | 1 cut(s) | 151 |
| Cac8I | GCNNGC | 6 cut(s) | 211, 447, 543, 738, 1437, 1540 |
| CaiI | CAGNNNCTG | 1 cut(s) | 325 |
| CciI | TCATGA | 1 cut(s) | 1122 |
| CfoI | GCGC | 2 cut(s) | 178, 541 |
| Cfr13I | GGNCC | 5 cut(s) | 362, 389, 457, 458, 797 |
| Cfr42I | CCGCGG | 1 cut(s) | 238 |
| CseI | GACGC | 2 cut(s) | 176, 1411 |
| Csp6I | GTAC | 4 cut(s) | 848, 1007, 1146, 1376 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 523, 558, 663, 698 |
| CviQI | GTAC | 4 cut(s) | 848, 1007, 1146, 1376 |
| DdeI | CTNAG | 6 cut(s) | 202, 241, 762, 1451, 1489, 1534 |
| DpnI | GATC | 4 cut(s) | 673, 1341, 1349, 1449 |
| DpnII | GATC | 4 cut(s) | 671, 1339, 1347, 1447 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 416 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 416 |
| EaeI | YGGCCR | 2 cut(s) | 603, 1437 |
| Eco130I | CCWWGG | 5 cut(s) | 158, 453, 990, 1104, 1310 |
| Eco24I | GRGCYC | 1 cut(s) | 461 |
| Eco32I | GATATC | 1 cut(s) | 579 |
| Eco47I | GGWCC | 2 cut(s) | 362, 797 |
| Eco57I | CTGAAG | 2 cut(s) | 957, 1650 |
| Eco81I | CCTNAGG | 1 cut(s) | 1489 |
| Eco88I | CYCGRG | 1 cut(s) | 1193 |
| EcoO109I | RGGNCCY | 3 cut(s) | 362, 458, 797 |
| EcoRII | CCWGG | 3 cut(s) | 226, 460, 791 |
| EcoRV | GATATC | 1 cut(s) | 579 |
| EcoT14I | CCWWGG | 5 cut(s) | 158, 453, 990, 1104, 1310 |
| EcoT22I | ATGCAT | 1 cut(s) | 1365 |
| EcoT38I | GRGCYC | 1 cut(s) | 461 |
| ErhI | CCWWGG | 5 cut(s) | 158, 453, 990, 1104, 1310 |
| FaqI | GGGAC | 1 cut(s) | 269 |
| FauI | CCCGC | 3 cut(s) | 373, 543, 1649 |
| FauNDI | CATATG | 1 cut(s) | 709 |
| FbaI | TGATCA | 2 cut(s) | 1339, 1347 |
| FokI | GGATG | 4 cut(s) | 157, 349, 973, 1491 |
| FriOI | GRGCYC | 1 cut(s) | 461 |
| FspBI | CTAG | 2 cut(s) | 311, 546 |
| GlaI | GCGC | 2 cut(s) | 177, 540 |
| GsuI | CTGGAG | 1 cut(s) | 249 |
| HaeIII | GGCC | 5 cut(s) | 390, 459, 605, 736, 1439 |
| HapII | CCGG | 1 cut(s) | 1440 |
| HgaI | GACGC | 2 cut(s) | 176, 1411 |
| HhaI | GCGC | 2 cut(s) | 178, 541 |
| Hin1I | GRCGYC | 2 cut(s) | 187, 1403 |
| Hin6I | GCGC | 2 cut(s) | 176, 539 |
| HinP1I | GCGC | 2 cut(s) | 176, 539 |
| HinfI | GANTC | 9 cut(s) | 231, 316, 322, 331, 400, 636, 788, 1126, 1573 |
| HpaII | CCGG | 1 cut(s) | 1440 |
| HphI | GGTGA | 5 cut(s) | 23, 91, 125, 854, 1169 |
| Hpy166II | GTNNAC | 4 cut(s) | 357, 1146, 1160, 1496 |
| Hpy188III | TCNNGA | 2 cut(s) | 1123, 1355 |
| Hpy8I | GTNNAC | 4 cut(s) | 357, 1146, 1160, 1496 |
| Hpy99I | CGWCG | 2 cut(s) | 192, 419 |
| HpyAV | CCTTC | 4 cut(s) | 96, 106, 334, 799 |
| HpyCH4III | ACNGT | 4 cut(s) | 415, 469, 1006, 1150 |
| HpyF3I | CTNAG | 6 cut(s) | 202, 241, 762, 1451, 1489, 1534 |
| Hsp92I | GRCGYC | 2 cut(s) | 187, 1403 |
| HspAI | GCGC | 2 cut(s) | 176, 539 |
| KpnI | GGTACC | 1 cut(s) | 1379 |
| Ksp22I | TGATCA | 2 cut(s) | 1339, 1347 |
| KspI | CCGCGG | 1 cut(s) | 238 |
| Kzo9I | GATC | 4 cut(s) | 671, 1339, 1347, 1447 |
| LmnI | GCTCC | 3 cut(s) | 440, 1027, 1265 |
| LweI | GCATC | 3 cut(s) | 253, 1350, 1469 |
| MaeI | CTAG | 2 cut(s) | 311, 546 |
| MaeIII | GTNAC | 3 cut(s) | 906, 1248, 1399 |
| MalI | GATC | 4 cut(s) | 673, 1341, 1349, 1449 |
| MbiI | CCGCTC | 1 cut(s) | 1476 |
| MboI | GATC | 4 cut(s) | 671, 1339, 1347, 1447 |
| MboII | GAAGA | 1 cut(s) | 1643 |
| MfeI | CAATTG | 1 cut(s) | 510 |
| MflI | RGATCY | 1 cut(s) | 1447 |
| MhlI | GDGCHC | 4 cut(s) | 461, 655, 1498, 1555 |
| MlsI | TGGCCA | 1 cut(s) | 605 |
| MluCI | AATT | 3 cut(s) | 510, 1395, 1649 |
| MluNI | TGGCCA | 1 cut(s) | 605 |
| MlyI | GAGTC | 5 cut(s) | 240, 325, 340, 409, 1582 |
| MmeI | TCCRAC | 3 cut(s) | 314, 577, 1276 |
| Mox20I | TGGCCA | 1 cut(s) | 605 |
| Mph1103I | ATGCAT | 1 cut(s) | 1365 |
| MscI | TGGCCA | 1 cut(s) | 605 |
| MseI | TTAA | 3 cut(s) | 297, 617, 1394 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1567 |
| Msp20I | TGGCCA | 1 cut(s) | 605 |
| MspA1I | CMGCKG | 1 cut(s) | 237 |
| MspI | CCGG | 1 cut(s) | 1440 |
| MspR9I | CCNGG | 3 cut(s) | 228, 462, 793 |
| MunI | CAATTG | 1 cut(s) | 510 |
| Mva1269I | GAATGC | 2 cut(s) | 1242, 1562 |
| MvaI | CCWGG | 3 cut(s) | 228, 462, 793 |
| MvnI | CGCG | 2 cut(s) | 176, 237 |
| NcoI | CCATGG | 2 cut(s) | 158, 1104 |
| NdeI | CATATG | 1 cut(s) | 709 |
| NdeII | GATC | 4 cut(s) | 671, 1339, 1347, 1447 |
| NlaIV | GGNNCC | 4 cut(s) | 364, 459, 798, 1377 |
| NmuCI | GTSAC | 3 cut(s) | 906, 1248, 1399 |
| NsiI | ATGCAT | 1 cut(s) | 1365 |
| NspI | RCATGY | 1 cut(s) | 1144 |
| NspV | TTCGAA | 1 cut(s) | 1647 |
| PagI | TCATGA | 1 cut(s) | 1122 |
| PaqCI | CACCTGC | 1 cut(s) | 151 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 414 |
| PctI | GAATGC | 2 cut(s) | 1242, 1562 |
| PfeI | GAWTC | 4 cut(s) | 322, 636, 788, 1126 |
| PflFI | GACNNNGTC | 1 cut(s) | 413 |
| PleI | GAGTC | 5 cut(s) | 239, 324, 339, 408, 1581 |
| PpsI | GAGTC | 5 cut(s) | 239, 324, 339, 408, 1581 |
| PpuMI | RGGWCCY | 2 cut(s) | 362, 797 |
| PshBI | ATTAAT | 1 cut(s) | 1394 |
| Psp5II | RGGWCCY | 2 cut(s) | 362, 797 |
| Psp6I | CCWGG | 3 cut(s) | 226, 460, 791 |
| PspGI | CCWGG | 3 cut(s) | 226, 460, 791 |
| PspN4I | GGNNCC | 4 cut(s) | 364, 459, 798, 1377 |
| PspOMI | GGGCCC | 1 cut(s) | 457 |
| PspPI | GGNCC | 5 cut(s) | 362, 389, 457, 458, 797 |
| PspPPI | RGGWCCY | 2 cut(s) | 362, 797 |
| PstNI | CAGNNNCTG | 1 cut(s) | 325 |
| PsuI | RGATCY | 1 cut(s) | 1447 |
| PsyI | GACNNNGTC | 1 cut(s) | 413 |
| RsaI | GTAC | 4 cut(s) | 849, 1008, 1147, 1377 |
| RsaNI | GTAC | 4 cut(s) | 848, 1007, 1146, 1376 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1567 |
| SacII | CCGCGG | 1 cut(s) | 238 |
| SaqAI | TTAA | 3 cut(s) | 297, 617, 1394 |
| Sau3AI | GATC | 4 cut(s) | 671, 1339, 1347, 1447 |
| Sau96I | GGNCC | 5 cut(s) | 362, 389, 457, 458, 797 |
| ScaI | AGTACT | 1 cut(s) | 1008 |
| SchI | GAGTC | 5 cut(s) | 240, 325, 340, 409, 1582 |
| ScrFI | CCNGG | 3 cut(s) | 228, 462, 793 |
| SduI | GDGCHC | 4 cut(s) | 461, 655, 1498, 1555 |
| SfaNI | GCATC | 3 cut(s) | 253, 1350, 1469 |
| SfcI | CTRYAG | 1 cut(s) | 816 |
| Sfr303I | CCGCGG | 1 cut(s) | 238 |
| SfuI | TTCGAA | 1 cut(s) | 1647 |
| SgrBI | CCGCGG | 1 cut(s) | 238 |
| SinI | GGWCC | 2 cut(s) | 362, 797 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1567 |
| SmlI | CTYRAG | 3 cut(s) | 1244, 1421, 1661 |
| SmoI | CTYRAG | 3 cut(s) | 1244, 1421, 1661 |
| Sse9I | AATT | 3 cut(s) | 510, 1395, 1649 |
| SsiI | CCGC | 9 cut(s) | 174, 207, 235, 237, 278, 366, 550, 1476, 1642 |
| SspMI | CTAG | 2 cut(s) | 311, 546 |
| StyD4I | CCNGG | 3 cut(s) | 226, 460, 791 |
| StyI | CCWWGG | 5 cut(s) | 158, 453, 990, 1104, 1310 |
| TaaI | ACNGT | 4 cut(s) | 415, 469, 1006, 1150 |
| TaqI | TCGA | 4 cut(s) | 408, 1216, 1234, 1647 |
| TaqII | GACCGA | 1 cut(s) | 413 |
| TasI | AATT | 3 cut(s) | 510, 1395, 1649 |
| TatI | WGTACW | 2 cut(s) | 847, 1006 |
| TauI | GCSGC | 2 cut(s) | 209, 240 |
| TfiI | GAWTC | 4 cut(s) | 322, 636, 788, 1126 |
| Tru1I | TTAA | 3 cut(s) | 297, 617, 1394 |
| Tru9I | TTAA | 3 cut(s) | 297, 617, 1394 |
| TscAI | CASTG | 8 cut(s) | 357, 376, 541, 613, 829, 1503, 1560, 1574 |
| TseFI | GTSAC | 3 cut(s) | 906, 1248, 1399 |
| Tsp45I | GTSAC | 3 cut(s) | 906, 1248, 1399 |
| TspDTI | ATGAA | 6 cut(s) | 17, 353, 487, 636, 683, 797 |
| TspRI | CASTG | 8 cut(s) | 357, 376, 541, 613, 829, 1503, 1560, 1574 |
| Tth111I | GACNNNGTC | 1 cut(s) | 413 |
| VneI | GTGCAC | 1 cut(s) | 1494 |
| VpaK11BI | GGWCC | 2 cut(s) | 362, 797 |
| VspI | ATTAAT | 1 cut(s) | 1394 |
| XceI | RCATGY | 1 cut(s) | 1144 |
| XspI | CTAG | 2 cut(s) | 311, 546 |
| ZrmI | AGTACT | 1 cut(s) | 1008 |
| Zsp2I | ATGCAT | 1 cut(s) | 1365 |