Rmu_sc0002938.1_g000054

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002938.1
OG0001733
Physical Location & Seq
Forward (+)
193371 .. 201709
8339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002938.1_g000054.1.cds

Sequence Viewer

Length: 2046 bp
atgcagaccaaaaccctaatagctcaccctcctcacccccgtctccttccaaaccctaaccgccacaactcccttccccaaccttcgttctcacccttctctttcactccgcgcttgaataccacgcgccaacttccgatattgcgctccccggcgccaatacggcgtcgtaacaggctattaacagcttgtgttagcgaaaacctcgatgaaggaaacgacgacgcttgggaggtggttaaggttgaggaattggagagtcggagcatatggaatcagatgaaggagattgcaatgttcactggacccgctactgggctttggttgtgcggcccacttatgagtctgattgacactgtcgtcatcggtcagggaagcacaatcgagcttgctgctttaggccctggaactgtaatgtgtgactatatgagttatgtgttcatgttcctttctattgcaacttcaaacatggttgccacttcgcttgcaagacgggacaagaatgaagtgcaacatcagatatctatcttgctttttcttggattggcatctggcttcttaatgcttttatttacaagattcttcggttcatgggcactaactgcttttactggatcaaagaatgcagagattattactgcagcaaatacatacgttcagatacgaggattcgcgtggccggcgctccttgttggttgggttgctcagagtgcaagccttggcatgaaagattcttggggtcctttgaaggccttggccgtggccagtgttataaatggtgttggtgatgcactcctgtgcagctatttaggctatggtatagctggtgcagcatgggcaactatggtttcacaggttgttgcaggatatatgatgattgaagctctgaacaaaaaaggttacgatggctatgccatttctgttccatcgtccaaggaacttctaacagtacttgggcttgctgctccagtatttataacattgatgtcaaaggtagttttctactctctccttatctattttgcgacgtctatgggaacacataccatggctgctcatcaggtcatgatacaaacattctgcatgtgtacagtgtggggtgagcctctctctcaaactgcacaatcatttatgccggaatttttatttggagtgaatcgtagtttgcctaaggcccgcacattgctcaagtcacttgtcatcatcggagctatacttggttcagtattaggaatagttggaacatgtgttccatggttctttcccagtatctttacacctgatcaaaagatcatacaagagatgcataaggtgctaataccatatttccttgcattagttgtgacgcccccgactcactgccttgagggaacattactggctggacgagatctgagatttattagtctgtcaatgagtggatgcttctctttgggtgcacttctattgctgcttgtgagcagtagaggatttggtttatcaggcgtctggtgggcattagcaggatttcaatggagtcggcttttactctctctacgccgtctcatatcctcggatgggatactctactctgaagatgtgagccagtataaactggaaaaggtatgcctacaaatttggactggattgagggttatcttaaggtcttccaaaatttatctctctagaccttatgatagccaactctttgcaaaattgatcacctcttgctggcaaatatggaaagctagaaatggcaaagtgtttagaaatactcatttaaatccacaatctgtggtagcagcttcagctgttgtactagctaataccagctcaacaattggacaagcgggaagagattcttctcaaaaccaatcttccaccataaggtggacttctccttctgcttgctccgttaaattgaacttcaatggctctgtcaacagatcctccgctggtggttttgttgtacttgattctcatggcagacctcttattgcagccactagacaagttggcaatgctacagtacctttagcagaagccctttctctgagacggtcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

681

Amino Acids

74.32

Weight (kDa)

9.59

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 773, 977
AasI GACNNNNNNGTC 1 cut(s) 359
AatII GACGTC 1 cut(s) 1031
AccB1I GGYRCC 1 cut(s) 154
AccB7I CCANNNNNTGG 1 cut(s) 1869
AccII CGCG 3 cut(s) 112, 127, 674
AciI CCGC 7 cut(s) 61, 110, 309, 330, 1177, 1829, 1932
AclWI GGATC 2 cut(s) 622, 1920
AcoI YGGCCR 3 cut(s) 677, 756, 762
AcsI RAATTY 3 cut(s) 1139, 1614, 1653
AcuI CTGAAG 2 cut(s) 1593, 1770
AcyI GRCGYC 5 cut(s) 155, 166, 1028, 1346, 1485
AfaI GTAC 5 cut(s) 951, 1090, 1797, 1950, 2010
AfiI CCNNNNNNNGG 6 cut(s) 314, 315, 1557, 1710, 1866, 1869
AflII CTTAAG 1 cut(s) 1639
AflIII ACRYGT 1 cut(s) 1244
AgsI TTSAA 7 cut(s) 118, 465, 748, 881, 1511, 1903, 1909
AjnI CCWGG 1 cut(s) 403
AjuI GAANNNNNNNTTGG 2 cut(s) 1131, 1163
AleI CACNNNNGTG 1 cut(s) 796
AloI GAACNNNNNNTCC 4 cut(s) 1233, 1234, 1265, 1266
Alw21I GWGCWC 1 cut(s) 1441
Alw26I GTCTC 3 cut(s) 47, 1547, 2029
Alw44I GTGCAC 1 cut(s) 1437
AlwI GGATC 2 cut(s) 622, 1920
AoxI GGCC 7 cut(s) 331, 400, 677, 750, 756, 762, 1173
ApaLI GTGCAC 1 cut(s) 1437
ApeKI GCWGC 9 cut(s) 392, 641, 801, 830, 962, 1052, 1450, 1781, 1979
ApoI RAATTY 3 cut(s) 1139, 1614, 1653
Asp700I GAANNNNTTC 1 cut(s) 1837
AspLEI GCGC 5 cut(s) 114, 129, 147, 157, 685
AspS9I GGNCC 5 cut(s) 305, 332, 401, 740, 1174
AsuC2I CCSGG 1 cut(s) 152
AsuHPI GGTGA 6 cut(s) 17, 26, 84, 797, 1112, 1693
AvaII GGWCC 2 cut(s) 305, 740
AxyI CCTNAGG 1 cut(s) 1170
BaeGI GKGCMC 2 cut(s) 598, 1441
BalI TGGCCA 1 cut(s) 764
BanI GGYRCC 1 cut(s) 154
BbsI GAAGAC 1 cut(s) 1638
Bbv12I GWGCWC 1 cut(s) 1441
BbvI GCAGC 9 cut(s) 379, 653, 813, 842, 949, 1039, 1437, 1793, 1991
BccI CCATC 3 cut(s) 899, 934, 1550
BceAI ACGGC 3 cut(s) 179, 743, 1524
BcgI CGANNNNNNTGC 4 cut(s) 374, 408, 893, 927
BciT130I CCWGG 1 cut(s) 405
BciVI GTATCC 1 cut(s) 1554
BclI TGATCA 2 cut(s) 1282, 1698
BcnI CCSGG 1 cut(s) 152
BcoDI GTCTC 3 cut(s) 47, 1547, 2029
BfaI CTAG 4 cut(s) 1665, 1728, 1799, 1986
BfmI CTRYAG 2 cut(s) 639, 2004
BfoI RGCGCY 2 cut(s) 158, 686
BfrI CTTAAG 1 cut(s) 1639
BfuI GTATCC 1 cut(s) 1554
BglI GCCNNNNNGGC 1 cut(s) 163
BglII AGATCT 1 cut(s) 1390
BmcAI AGTACT 1 cut(s) 951
Bme1390I CCNGG 2 cut(s) 152, 405
Bme18I GGWCC 2 cut(s) 305, 740
BmgT120I GGNCC 5 cut(s) 305, 332, 401, 740, 1174
BmiI GGNNCC 3 cut(s) 156, 307, 741
BmrFI CCNGG 2 cut(s) 152, 405
BmrI ACTGGG 2 cut(s) 324, 1260
BmsI GCATC 4 cut(s) 557, 778, 1293, 1412
BmuI ACTGGG 2 cut(s) 324, 1260
BpiI GAAGAC 1 cut(s) 1638
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
BpmI CTGGAG 1 cut(s) 951
BpuEI CTTGAG 2 cut(s) 1172, 1385
BpuMI CCSGG 1 cut(s) 152
BsaBI GATNNNNATC 2 cut(s) 524, 547
BsaHI GRCGYC 5 cut(s) 155, 166, 1028, 1346, 1485
BsaJI CCNNGG 9 cut(s) 150, 403, 718, 753, 759, 933, 1047, 1253, 1551
BsaXI ACNNNNNCTCC 2 cut(s) 1913, 1943
Bsc4I CCNNNNNNNGG 6 cut(s) 314, 315, 1557, 1710, 1866, 1869
Bse118I RCCGGY 1 cut(s) 679
Bse21I CCTNAGG 1 cut(s) 1170
Bse3DI GCAATG 3 cut(s) 300, 1181, 2005
Bse8I GATNNNNATC 2 cut(s) 524, 547
BseBI CCWGG 1 cut(s) 405
BseDI CCNNGG 9 cut(s) 150, 403, 718, 753, 759, 933, 1047, 1253, 1551
BseGI GGATG 2 cut(s) 1427, 1561
BseJI GATNNNNATC 2 cut(s) 524, 547
BseLI CCNNNNNNNGG 6 cut(s) 314, 315, 1557, 1710, 1866, 1869
BseMI GCAATG 3 cut(s) 300, 1181, 2005
BseMII CTCAG 3 cut(s) 719, 1385, 2024
BseRI GAGGAG 1 cut(s) 21
BseSI GKGCMC 2 cut(s) 598, 1441
BseXI GCAGC 9 cut(s) 379, 653, 813, 842, 949, 1039, 1437, 1793, 1991
BsgI GTGCAG 3 cut(s) 820, 849, 1104
Bsh1236I CGCG 3 cut(s) 112, 127, 674
BshFI GGCC 7 cut(s) 333, 402, 679, 752, 758, 764, 1175
BshNI GGYRCC 1 cut(s) 154
BsiHKAI GWGCWC 1 cut(s) 1441
BsiSI CCGG 3 cut(s) 152, 680, 1136
BslFI GGGAC 1 cut(s) 509
BslI CCNNNNNNNGG 6 cut(s) 314, 315, 1557, 1710, 1866, 1869
BsmAI GTCTC 3 cut(s) 47, 1547, 2029
BsmBI CGTCTC 3 cut(s) 47, 1547, 2029
BsmFI GGGAC 1 cut(s) 509
BsmI GAATGC 1 cut(s) 628
BsnI GGCC 7 cut(s) 333, 402, 679, 752, 758, 764, 1175
Bsp1286I GDGCHC 2 cut(s) 598, 1441
Bsp1407I TGTACA 1 cut(s) 1088
Bsp143I GATC 6 cut(s) 614, 1282, 1290, 1390, 1698, 1925
Bsp19I CCATGG 2 cut(s) 1047, 1253
BspACI CCGC 7 cut(s) 61, 110, 309, 330, 1177, 1829, 1932
BspANI GGCC 7 cut(s) 333, 402, 679, 752, 758, 764, 1175
BspCNI CTCAG 3 cut(s) 718, 1386, 2025
BspFNI CGCG 3 cut(s) 112, 127, 674
BspHI TCATGA 1 cut(s) 1065
BspLI GGNNCC 3 cut(s) 156, 307, 741
BspMAI CTGCAG 1 cut(s) 643
BspPI GGATC 2 cut(s) 622, 1920
BspT107I GGYRCC 1 cut(s) 154
BspTI CTTAAG 1 cut(s) 1639
BsrDI GCAATG 3 cut(s) 300, 1181, 2005
BsrFI RCCGGY 1 cut(s) 679
BsrGI TGTACA 1 cut(s) 1088
BssAI RCCGGY 1 cut(s) 679
BssECI CCNNGG 9 cut(s) 150, 403, 718, 753, 759, 933, 1047, 1253, 1551
BssMI GATC 6 cut(s) 614, 1282, 1290, 1390, 1698, 1925
BssNI GRCGYC 5 cut(s) 155, 166, 1028, 1346, 1485
BssT1I CCWWGG 5 cut(s) 718, 753, 933, 1047, 1253
Bst2UI CCWGG 1 cut(s) 405
Bst4CI ACNGT 6 cut(s) 358, 412, 949, 1093, 2008, 2040
Bst6I CTCTTC 1 cut(s) 1828
BstACI GRCGYC 5 cut(s) 155, 166, 1028, 1346, 1485
BstAFI CTTAAG 1 cut(s) 1639
BstAPI GCANNNNNTGC 2 cut(s) 602, 1312
BstAUI TGTACA 1 cut(s) 1088
BstC8I GCNNGC 8 cut(s) 390, 486, 681, 715, 960, 1177, 1712, 1888
BstDEI CTNAG 5 cut(s) 705, 1170, 1394, 2033, 2043
BstDSI CCRYGG 3 cut(s) 759, 1047, 1253
BstF5I GGATG 2 cut(s) 1427, 1561
BstFNI CGCG 3 cut(s) 112, 127, 674
BstH2I RGCGCY 2 cut(s) 158, 686
BstHHI GCGC 5 cut(s) 114, 129, 147, 157, 685
BstKTI GATC 6 cut(s) 617, 1285, 1293, 1393, 1701, 1928
BstMAI GTCTC 3 cut(s) 47, 1547, 2029
BstMBI GATC 6 cut(s) 614, 1282, 1290, 1390, 1698, 1925
BstMWI GCNNNNNNNGC 9 cut(s) 163, 602, 680, 710, 810, 830, 836, 1312, 1787
BstNI CCWGG 1 cut(s) 405
BstNSI RCATGY 2 cut(s) 1087, 1248
BstSCI CCNGG 2 cut(s) 150, 403
BstSFI CTRYAG 2 cut(s) 639, 2004
BstSLI GKGCMC 2 cut(s) 598, 1441
BstUI CGCG 3 cut(s) 112, 127, 674
BstV1I GCAGC 9 cut(s) 379, 653, 813, 842, 949, 1039, 1437, 1793, 1991
BstV2I GAAGAC 1 cut(s) 1638
BstX2I RGATCY 2 cut(s) 1390, 1925
BstYI RGATCY 2 cut(s) 1390, 1925
Bsu36I CCTNAGG 1 cut(s) 1170
BsuI GTATCC 1 cut(s) 1554
BsuRI GGCC 7 cut(s) 333, 402, 679, 752, 758, 764, 1175
BtgI CCRYGG 3 cut(s) 759, 1047, 1253
BtsCI GGATG 2 cut(s) 1427, 1561
BtsI GCAGTG 1 cut(s) 1357
BtsIMutI CAGTG 5 cut(s) 300, 354, 772, 1098, 1357
Cac8I GCNNGC 8 cut(s) 390, 486, 681, 715, 960, 1177, 1712, 1888
CciI TCATGA 1 cut(s) 1065
CfoI GCGC 5 cut(s) 114, 129, 147, 157, 685
Cfr10I RCCGGY 1 cut(s) 679
Cfr13I GGNCC 5 cut(s) 305, 332, 401, 740, 1174
CseI GACGC 4 cut(s) 155, 233, 1354, 1474
Csp6I GTAC 5 cut(s) 950, 1089, 1796, 1949, 2009
CspCI CAANNNNNGTGG 2 cut(s) 466, 501
CviQI GTAC 5 cut(s) 950, 1089, 1796, 1949, 2009
DdeI CTNAG 5 cut(s) 705, 1170, 1394, 2033, 2043
DinI GGCGCC 1 cut(s) 156
DpnI GATC 6 cut(s) 616, 1284, 1292, 1392, 1700, 1927
DpnII GATC 6 cut(s) 614, 1282, 1290, 1390, 1698, 1925
DraI TTTAAA 1 cut(s) 1761
DrdI GACNNNNNNGTC 1 cut(s) 359
DseDI GACNNNNNNGTC 1 cut(s) 359
EaeI YGGCCR 3 cut(s) 677, 756, 762
Eam1104I CTCTTC 1 cut(s) 1828
EarI CTCTTC 1 cut(s) 1828
Eco130I CCWWGG 5 cut(s) 718, 753, 933, 1047, 1253
Eco147I AGGCCT 1 cut(s) 752
Eco32I GATATC 1 cut(s) 522
Eco47I GGWCC 2 cut(s) 305, 740
Eco57I CTGAAG 2 cut(s) 1593, 1770
Eco81I CCTNAGG 1 cut(s) 1170
EcoO109I RGGNCCY 2 cut(s) 401, 740
EcoRII CCWGG 1 cut(s) 403
EcoRV GATATC 1 cut(s) 522
EcoT14I CCWWGG 5 cut(s) 718, 753, 933, 1047, 1253
EcoT22I ATGCAT 1 cut(s) 1308
EgeI GGCGCC 1 cut(s) 156
EheI GGCGCC 1 cut(s) 156
ErhI CCWWGG 5 cut(s) 718, 753, 933, 1047, 1253
Esp3I CGTCTC 3 cut(s) 47, 1547, 2029
FalI AAGNNNNNCTT 4 cut(s) 1825, 1857, 1858, 1890
FaqI GGGAC 1 cut(s) 509
FauI CCCGC 3 cut(s) 316, 1184, 1822
FauNDI CATATG 1 cut(s) 269
FbaI TGATCA 2 cut(s) 1282, 1698
FokI GGATG 2 cut(s) 1434, 1568
FspBI CTAG 4 cut(s) 1665, 1728, 1799, 1986
GlaI GCGC 5 cut(s) 113, 128, 146, 156, 684
GsuI CTGGAG 1 cut(s) 951
HaeII RGCGCY 2 cut(s) 158, 686
HaeIII GGCC 7 cut(s) 333, 402, 679, 752, 758, 764, 1175
HapII CCGG 3 cut(s) 152, 680, 1136
HgaI GACGC 4 cut(s) 155, 233, 1354, 1474
HhaI GCGC 5 cut(s) 114, 129, 147, 157, 685
Hin1I GRCGYC 5 cut(s) 155, 166, 1028, 1346, 1485
Hin6I GCGC 5 cut(s) 112, 127, 145, 155, 683
HinP1I GCGC 5 cut(s) 112, 127, 145, 155, 683
HincII GTYRAC 1 cut(s) 1921
HindII GTYRAC 1 cut(s) 1921
HpaII CCGG 3 cut(s) 152, 680, 1136
HphI GGTGA 6 cut(s) 17, 26, 84, 797, 1112, 1693
Hpy166II GTNNAC 5 cut(s) 300, 1089, 1439, 1872, 1921
Hpy188III TCNNGA 2 cut(s) 1066, 1665
Hpy8I GTNNAC 5 cut(s) 300, 1089, 1439, 1872, 1921
Hpy99I CGWCG 4 cut(s) 171, 224, 227, 1030
HpyAV CCTTC 8 cut(s) 56, 83, 93, 106, 206, 277, 742, 1890
HpyCH4III ACNGT 6 cut(s) 358, 412, 949, 1093, 2008, 2040
HpyCH4IV ACGT 2 cut(s) 654, 1028
HpyF10VI GCNNNNNNNGC 9 cut(s) 163, 602, 680, 710, 810, 830, 836, 1312, 1787
HpyF3I CTNAG 5 cut(s) 705, 1170, 1394, 2033, 2043
HpySE526I ACGT 2 cut(s) 654, 1028
Hsp92I GRCGYC 5 cut(s) 155, 166, 1028, 1346, 1485
HspAI GCGC 5 cut(s) 112, 127, 145, 155, 683
KasI GGCGCC 1 cut(s) 154
KroI GCCGGC 1 cut(s) 679
KroNI GCCGGC 1 cut(s) 681
Ksp22I TGATCA 2 cut(s) 1282, 1698
Kzo9I GATC 6 cut(s) 614, 1282, 1290, 1390, 1698, 1925
LmnI GCTCC 6 cut(s) 152, 264, 690, 970, 1208, 1895
Lsp1109I GCAGC 9 cut(s) 379, 653, 813, 842, 949, 1039, 1437, 1793, 1991
LweI GCATC 4 cut(s) 557, 778, 1293, 1412
MaeI CTAG 4 cut(s) 1665, 1728, 1799, 1986
MaeII ACGT 2 cut(s) 654, 1028
MaeIII GTNAC 5 cut(s) 170, 419, 899, 1191, 1342
MalI GATC 6 cut(s) 616, 1284, 1292, 1392, 1700, 1927
MboI GATC 6 cut(s) 614, 1282, 1290, 1390, 1698, 1925
MboII GAAGA 6 cut(s) 574, 1586, 1638, 1833, 1845, 1848
MfeI CAATTG 1 cut(s) 1818
MflI RGATCY 2 cut(s) 1390, 1925
MhlI GDGCHC 2 cut(s) 598, 1441
MlsI TGGCCA 1 cut(s) 764
MluCI AATT 7 cut(s) 251, 1139, 1614, 1653, 1694, 1818, 1898
MluNI TGGCCA 1 cut(s) 764
Mly113I GGCGCC 1 cut(s) 155
MlyI GAGTC 4 cut(s) 268, 352, 1348, 1525
MmeI TCCRAC 2 cut(s) 242, 1219
Mox20I TGGCCA 1 cut(s) 764
Mph1103I ATGCAT 1 cut(s) 1308
MroNI GCCGGC 1 cut(s) 679
MroXI GAANNNNTTC 1 cut(s) 1837
MscI TGGCCA 1 cut(s) 764
MseI TTAA 6 cut(s) 182, 240, 560, 1640, 1760, 1896
MslI CAYNNNNRTG 1 cut(s) 796
Msp20I TGGCCA 1 cut(s) 764
MspA1I CMGCKG 2 cut(s) 1790, 1934
MspCI CTTAAG 1 cut(s) 1639
MspI CCGG 3 cut(s) 152, 680, 1136
MspR9I CCNGG 2 cut(s) 152, 405
MunI CAATTG 1 cut(s) 1818
Mva1269I GAATGC 1 cut(s) 628
MvaI CCWGG 1 cut(s) 405
MvnI CGCG 3 cut(s) 112, 127, 674
MwoI GCNNNNNNNGC 9 cut(s) 163, 602, 680, 710, 810, 830, 836, 1312, 1787
NaeI GCCGGC 1 cut(s) 681
NarI GGCGCC 1 cut(s) 155
NciI CCSGG 1 cut(s) 152
NcoI CCATGG 2 cut(s) 1047, 1253
NdeI CATATG 1 cut(s) 269
NdeII GATC 6 cut(s) 614, 1282, 1290, 1390, 1698, 1925
NgoMIV GCCGGC 1 cut(s) 679
NlaIV GGNNCC 3 cut(s) 156, 307, 741
NmuCI GTSAC 3 cut(s) 419, 1191, 1342
NsiI ATGCAT 1 cut(s) 1308
NspI RCATGY 2 cut(s) 1087, 1248
OliI CACNNNNGTG 1 cut(s) 796
PagI TCATGA 1 cut(s) 1065
PceI AGGCCT 1 cut(s) 752
PciI ACATGT 1 cut(s) 1244
PctI GAATGC 1 cut(s) 628
PdiI GCCGGC 1 cut(s) 681
PdmI GAANNNNTTC 1 cut(s) 1837
PfeI GAWTC 7 cut(s) 274, 579, 669, 731, 1156, 1838, 1955
PflFI GACNNNGTC 1 cut(s) 356
PflMI CCANNNNNTGG 1 cut(s) 1869
PleI GAGTC 4 cut(s) 267, 351, 1348, 1524
PluTI GGCGCC 1 cut(s) 158
PpsI GAGTC 4 cut(s) 267, 351, 1348, 1524
PpuMI RGGWCCY 1 cut(s) 740
PscI ACATGT 1 cut(s) 1244
PsiI TTATAA 2 cut(s) 773, 977
Psp5II RGGWCCY 1 cut(s) 740
Psp6I CCWGG 1 cut(s) 403
PspGI CCWGG 1 cut(s) 403
PspN4I GGNNCC 3 cut(s) 156, 307, 741
PspPI GGNCC 5 cut(s) 305, 332, 401, 740, 1174
PspPPI RGGWCCY 1 cut(s) 740
PstI CTGCAG 1 cut(s) 643
PsuI RGATCY 2 cut(s) 1390, 1925
PsyI GACNNNGTC 1 cut(s) 356
PvuII CAGCTG 1 cut(s) 1790
RsaI GTAC 5 cut(s) 951, 1090, 1797, 1950, 2010
RsaNI GTAC 5 cut(s) 950, 1089, 1796, 1949, 2009
RseI CAYNNNNRTG 1 cut(s) 796
SaqAI TTAA 6 cut(s) 182, 240, 560, 1640, 1760, 1896
Sau3AI GATC 6 cut(s) 614, 1282, 1290, 1390, 1698, 1925
Sau96I GGNCC 5 cut(s) 305, 332, 401, 740, 1174
ScaI AGTACT 1 cut(s) 951
SchI GAGTC 4 cut(s) 268, 352, 1348, 1525
ScrFI CCNGG 2 cut(s) 152, 405
SduI GDGCHC 2 cut(s) 598, 1441
SfaNI GCATC 4 cut(s) 557, 778, 1293, 1412
SfcI CTRYAG 2 cut(s) 639, 2004
SfoI GGCGCC 1 cut(s) 156
SinI GGWCC 2 cut(s) 305, 740
SmiI ATTTAAAT 1 cut(s) 1761
SmiMI CAYNNNNRTG 1 cut(s) 796
SmlI CTYRAG 3 cut(s) 1187, 1364, 1639
SmoI CTYRAG 3 cut(s) 1187, 1364, 1639
Sse9I AATT 7 cut(s) 251, 1139, 1614, 1653, 1694, 1818, 1898
SseBI AGGCCT 1 cut(s) 752
SsiI CCGC 7 cut(s) 61, 110, 309, 330, 1177, 1829, 1932
SspDI GGCGCC 1 cut(s) 154
SspMI CTAG 4 cut(s) 1665, 1728, 1799, 1986
StuI AGGCCT 1 cut(s) 752
StyD4I CCNGG 2 cut(s) 150, 403
StyI CCWWGG 5 cut(s) 718, 753, 933, 1047, 1253
SwaI ATTTAAAT 1 cut(s) 1761
TaaI ACNGT 6 cut(s) 358, 412, 949, 1093, 2008, 2040
TaiI ACGT 2 cut(s) 657, 1031
TaqI TCGA 2 cut(s) 207, 384
TaqII GACCGA 1 cut(s) 356
TasI AATT 7 cut(s) 251, 1139, 1614, 1653, 1694, 1818, 1898
TatI WGTACW 4 cut(s) 949, 1088, 1795, 1948
TauI GCSGC 1 cut(s) 333
TfiI GAWTC 7 cut(s) 274, 579, 669, 731, 1156, 1838, 1955
Tru1I TTAA 6 cut(s) 182, 240, 560, 1640, 1760, 1896
Tru9I TTAA 6 cut(s) 182, 240, 560, 1640, 1760, 1896
TscAI CASTG 5 cut(s) 307, 361, 772, 1098, 1364
TseFI GTSAC 3 cut(s) 419, 1191, 1342
TseI GCWGC 9 cut(s) 392, 641, 801, 830, 962, 1052, 1450, 1781, 1979
Tsp45I GTSAC 3 cut(s) 419, 1191, 1342
TspDTI ATGAA 6 cut(s) 225, 296, 430, 519, 579, 740
TspGWI ACGGA 1 cut(s) 1882
TspRI CASTG 5 cut(s) 307, 361, 772, 1098, 1364
Tth111I GACNNNGTC 1 cut(s) 356
Van91I CCANNNNNTGG 1 cut(s) 1869
Vha464I CTTAAG 1 cut(s) 1639
VneI GTGCAC 1 cut(s) 1437
VpaK11BI GGWCC 2 cut(s) 305, 740
XapI RAATTY 3 cut(s) 1139, 1614, 1653
XbaI TCTAGA 1 cut(s) 1664
XceI RCATGY 2 cut(s) 1087, 1248
XmnI GAANNNNTTC 1 cut(s) 1837
XspI CTAG 4 cut(s) 1665, 1728, 1799, 1986
ZraI GACGTC 1 cut(s) 1029
ZrmI AGTACT 1 cut(s) 951
Zsp2I ATGCAT 1 cut(s) 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.