Rroxscaffold_7G00201160

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001733
Physical Location & Seq
Forward (+)
48661796 .. 48669049
7254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00201160.1

Sequence Viewer

Length: 1731 bp
ATGCAGACCAAAACCCTAATAGCTCACCCTCCTCACCCCCGTCTCCTCCCAAACCCTAACCGCCACAACTCCCTTCCCCAACCTTCGTTCTCACCCTTCTCTTTCACGCCGCGCTTAAATACCACGCGCCAACTTCCGATATTGCGCTCCTCGGCGCCAATACGGCGTCGTAACAGGCTATTAACAGCTTGTGTTAGCGAAAACCTCGATGAAGGAAACGACGACGCTTTGGAGGCGGTTAAGGTTGAGGAATTGGAGAGTCGGAGCATATGGAATCAGATGAAGGAGATTGCAATGTTCACTGGACCCGCTACTGGGCTTTGGTTGTGCGGCCCACTTATGAGTCTGATTGACACTGTCGTCATCGGTCAGGGAAGCACAATCGAGCTTGCTGCTTTAGTGGGGCATGAGATAGACAAGAATGAAGTGCAACATCAGATATCTATCTTGCTGTTTCTTGGATTGGCATCTGGCTTCTTAATGCTTTTATTTACAAGATTCTTCGGTTCATGGGCACTAACTGCTTTTACTGGATCAAAGAATGCAGAGATTATTGCTGCAGCAAATACATACGTTCAGATACGAGGATTCGCATGGCCGGCACTCCTTGTTGGTTGGGTTGCTCAGAGTGCAAGCCTTGGCATGAAAGATTCTTGGGGTCCTTTGAAGGCCTTGGCCGTGGCCAGTGTTATAAATGGTGTTGGTGATGCACTCCTGTGCAGCTATTTAGGTTATGGTATAGCTGGTGCAGCATGGGCAACTATGGTTTCACAGGTTGTTGCAGGATATATGATGATTGAAGCTCTGAACAAAAAAGGTTACGATGGCTATGCCATTTCTGTTCCATCGTCCAAGGAACTTCTAACAGTACTTGGGCTTGCTGCTCCAGTATTTATAACATTGATGTCTAAGGTAGTTTTCTACTCTCTCCTTATCTATTTTGCGACGTCTATGGGAACACATACCATGGCCGCTCATCAGGTCATGATACAAACATTCTGCATGTGTACAGTGTGGGGTGAGCCTCTCTCTCAAACTGCACAATCGTTTATGCCGGAATTTTTATTTGGAGTGAATCGTAGTTTGCCTAAGGCCCGCACATTGCTCAAGTCACTTGTCATCATCGGAGCTATACTTGGTTCAGTATTAGGAATAGTTGGAACATGTGTTCCATGGTTCTTTCCCAGTATCTATACACCTGATCAAAAGATCATACAAGAGATGCATAAGGTGCTAATACCATATTTCCTTGCATTAGTTGTGACGCCCCGACTCACTGCCTTGAGGGAACATTACTGGTATATTTTCTTTTACTTCACTGATGATTTTCCCGTGCCTTCATTAAGAGCCTTATCATTGCAAACCTTGTCTTTTGGACCAAAGATTGATGAAAACTATGAGTCTGTCTCCTATGTTAATGATGTCAGCTCTCATGGAAGGATTTTAATGAATCTAGTAGTCATGTTATCCTTGAATGAGATTTTAGTATGTATGGCTGGACGAGATCTGAGATTTATTAGTCTGTCAATGAGTGGATGCTTCTCTTTGGGTGCACTTCTATTGCTGTTTGTGAGCAGTAGAGGATTTGGTTTATCAGGCGTCTGGTGGGCATTAGCAGGATTTCAATGGAGTCGGCTTTTACTCTCTCTACGCCGTCTTATATCCTCGGATGGGATACTCTACTCTGAAGATGTGAGCCGGTATAAACTGGAAAAGGTCAGAGCTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

576

Amino Acids

63.53

Weight (kDa)

8.78

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 692, 896
AasI GACNNNNNNGTC 1 cut(s) 359
AatII GACGTC 1 cut(s) 950
AccB1I GGYRCC 1 cut(s) 154
AccBSI CCGCTC 1 cut(s) 974
AccII CGCG 2 cut(s) 112, 127
AciI CCGC 7 cut(s) 61, 110, 236, 309, 330, 972, 1096
AclWI GGATC 1 cut(s) 541
AcoI YGGCCR 4 cut(s) 596, 675, 681, 969
AcsI RAATTY 1 cut(s) 1058
AcuI CTGAAG 1 cut(s) 1707
AcyI GRCGYC 5 cut(s) 155, 166, 947, 1265, 1599
AfaI GTAC 2 cut(s) 870, 1009
AfiI CCNNNNNNNGG 3 cut(s) 314, 315, 1671
AflIII ACRYGT 1 cut(s) 1163
AgsI TTSAA 4 cut(s) 667, 800, 1474, 1625
AjuI GAANNNNNNNTTGG 2 cut(s) 1050, 1082
AleI CACNNNNGTG 1 cut(s) 715
AloI GAACNNNNNNTCC 4 cut(s) 1152, 1153, 1184, 1185
AluBI AGCT 9 cut(s) 23, 188, 388, 723, 743, 803, 1130, 1428, 1724
AluI AGCT 9 cut(s) 23, 188, 388, 723, 743, 803, 1130, 1428, 1724
Alw21I GWGCWC 1 cut(s) 1555
Alw26I GTCTC 2 cut(s) 47, 1411
Alw44I GTGCAC 1 cut(s) 1551
AlwI GGATC 1 cut(s) 541
AoxI GGCC 7 cut(s) 331, 596, 669, 675, 681, 969, 1092
ApaLI GTGCAC 1 cut(s) 1551
ApeKI GCWGC 6 cut(s) 392, 557, 560, 720, 749, 881
ApoI RAATTY 1 cut(s) 1058
AspLEI GCGC 4 cut(s) 114, 129, 147, 157
AspS9I GGNCC 5 cut(s) 305, 332, 659, 1093, 1376
AsuHPI GGTGA 5 cut(s) 17, 26, 84, 716, 1031
AvaII GGWCC 3 cut(s) 305, 659, 1376
AxyI CCTNAGG 1 cut(s) 1089
BaeGI GKGCMC 2 cut(s) 517, 1555
BalI TGGCCA 1 cut(s) 683
BanI GGYRCC 1 cut(s) 154
Bbv12I GWGCWC 1 cut(s) 1555
BbvI GCAGC 6 cut(s) 379, 544, 572, 732, 761, 868
BccI CCATC 3 cut(s) 818, 853, 1664
BceAI ACGGC 3 cut(s) 179, 662, 1638
BcgI CGANNNNNNTGC 4 cut(s) 374, 408, 812, 846
BciVI GTATCC 1 cut(s) 1668
BclI TGATCA 1 cut(s) 1201
BcoDI GTCTC 2 cut(s) 47, 1411
BfaI CTAG 1 cut(s) 1454
BfmI CTRYAG 1 cut(s) 558
BfoI RGCGCY 1 cut(s) 158
BfuI GTATCC 1 cut(s) 1668
BglI GCCNNNNNGGC 1 cut(s) 163
BglII AGATCT 1 cut(s) 1504
BisI GCNGC 9 cut(s) 110, 331, 393, 558, 561, 721, 750, 882, 972
BlsI GCNGC 9 cut(s) 111, 332, 394, 559, 562, 722, 751, 883, 973
BmcAI AGTACT 1 cut(s) 870
Bme18I GGWCC 3 cut(s) 305, 659, 1376
BmgT120I GGNCC 5 cut(s) 305, 332, 659, 1093, 1376
BmiI GGNNCC 3 cut(s) 156, 307, 660
BmrI ACTGGG 2 cut(s) 324, 1179
BmsI GCATC 4 cut(s) 476, 697, 1212, 1526
BmuI ACTGGG 2 cut(s) 324, 1179
BplI GAGNNNNNCTC 4 cut(s) 1013, 1045, 1391, 1423
BpmI CTGGAG 1 cut(s) 870
BpuEI CTTGAG 2 cut(s) 1091, 1303
BsaBI GATNNNNATC 2 cut(s) 443, 466
BsaHI GRCGYC 5 cut(s) 155, 166, 947, 1265, 1599
BsaJI CCNNGG 8 cut(s) 150, 637, 672, 678, 852, 966, 1172, 1665
Bsc4I CCNNNNNNNGG 3 cut(s) 314, 315, 1671
Bse118I RCCGGY 2 cut(s) 598, 1698
Bse1I ACTGG 8 cut(s) 307, 319, 535, 684, 887, 1185, 1301, 1713
Bse21I CCTNAGG 1 cut(s) 1089
Bse3DI GCAATG 3 cut(s) 300, 1100, 1355
Bse8I GATNNNNATC 2 cut(s) 443, 466
BseDI CCNNGG 8 cut(s) 150, 637, 672, 678, 852, 966, 1172, 1665
BseGI GGATG 2 cut(s) 1541, 1675
BseJI GATNNNNATC 2 cut(s) 443, 466
BseLI CCNNNNNNNGG 3 cut(s) 314, 315, 1671
BseMI GCAATG 3 cut(s) 300, 1100, 1355
BseMII CTCAG 2 cut(s) 638, 1499
BseNI ACTGG 8 cut(s) 307, 319, 535, 684, 887, 1185, 1301, 1713
BseRI GAGGAG 3 cut(s) 21, 35, 139
BseSI GKGCMC 2 cut(s) 517, 1555
BseXI GCAGC 6 cut(s) 379, 544, 572, 732, 761, 868
BsgI GTGCAG 3 cut(s) 739, 768, 1023
Bsh1236I CGCG 2 cut(s) 112, 127
BshFI GGCC 7 cut(s) 333, 598, 671, 677, 683, 971, 1094
BshNI GGYRCC 1 cut(s) 154
BsiHKAI GWGCWC 1 cut(s) 1555
BsiSI CCGG 3 cut(s) 599, 1055, 1699
BslI CCNNNNNNNGG 3 cut(s) 314, 315, 1671
BsmAI GTCTC 2 cut(s) 47, 1411
BsmBI CGTCTC 1 cut(s) 47
BsmI GAATGC 1 cut(s) 547
BsnI GGCC 7 cut(s) 333, 598, 671, 677, 683, 971, 1094
Bsp1286I GDGCHC 2 cut(s) 517, 1555
Bsp1407I TGTACA 1 cut(s) 1007
Bsp143I GATC 4 cut(s) 533, 1201, 1209, 1504
Bsp19I CCATGG 2 cut(s) 966, 1172
BspACI CCGC 7 cut(s) 61, 110, 236, 309, 330, 972, 1096
BspANI GGCC 7 cut(s) 333, 598, 671, 677, 683, 971, 1094
BspCNI CTCAG 2 cut(s) 637, 1500
BspFNI CGCG 2 cut(s) 112, 127
BspHI TCATGA 1 cut(s) 984
BspLI GGNNCC 3 cut(s) 156, 307, 660
BspMAI CTGCAG 1 cut(s) 562
BspPI GGATC 1 cut(s) 541
BspT107I GGYRCC 1 cut(s) 154
BsrBI CCGCTC 1 cut(s) 974
BsrDI GCAATG 3 cut(s) 300, 1100, 1355
BsrFI RCCGGY 2 cut(s) 598, 1698
BsrGI TGTACA 1 cut(s) 1007
BsrI ACTGG 8 cut(s) 307, 319, 535, 684, 887, 1185, 1301, 1713
BssAI RCCGGY 2 cut(s) 598, 1698
BssECI CCNNGG 8 cut(s) 150, 637, 672, 678, 852, 966, 1172, 1665
BssMI GATC 4 cut(s) 533, 1201, 1209, 1504
BssNI GRCGYC 5 cut(s) 155, 166, 947, 1265, 1599
BssT1I CCWWGG 5 cut(s) 637, 672, 852, 966, 1172
Bst4CI ACNGT 3 cut(s) 358, 868, 1012
BstACI GRCGYC 5 cut(s) 155, 166, 947, 1265, 1599
BstAPI GCANNNNNTGC 2 cut(s) 521, 1231
BstAUI TGTACA 1 cut(s) 1007
BstC8I GCNNGC 5 cut(s) 390, 600, 634, 879, 1096
BstDEI CTNAG 4 cut(s) 624, 909, 1089, 1508
BstDSI CCRYGG 3 cut(s) 678, 966, 1172
BstF5I GGATG 2 cut(s) 1541, 1675
BstFNI CGCG 2 cut(s) 112, 127
BstH2I RGCGCY 1 cut(s) 158
BstHHI GCGC 4 cut(s) 114, 129, 147, 157
BstKTI GATC 4 cut(s) 536, 1204, 1212, 1507
BstMAI GTCTC 2 cut(s) 47, 1411
BstMBI GATC 4 cut(s) 533, 1201, 1209, 1504
BstMWI GCNNNNNNNGC 8 cut(s) 163, 233, 521, 599, 629, 749, 755, 1231
BstNSI RCATGY 2 cut(s) 1006, 1167
BstSFI CTRYAG 1 cut(s) 558
BstSLI GKGCMC 2 cut(s) 517, 1555
BstUI CGCG 2 cut(s) 112, 127
BstV1I GCAGC 6 cut(s) 379, 544, 572, 732, 761, 868
BstX2I RGATCY 1 cut(s) 1504
BstYI RGATCY 1 cut(s) 1504
Bsu36I CCTNAGG 1 cut(s) 1089
BsuI GTATCC 1 cut(s) 1668
BsuRI GGCC 7 cut(s) 333, 598, 671, 677, 683, 971, 1094
BtgI CCRYGG 3 cut(s) 678, 966, 1172
BtsCI GGATG 2 cut(s) 1541, 1675
BtsI GCAGTG 1 cut(s) 1275
BtsIMutI CAGTG 6 cut(s) 300, 354, 691, 1017, 1275, 1317
Cac8I GCNNGC 5 cut(s) 390, 600, 634, 879, 1096
CciI TCATGA 1 cut(s) 984
CfoI GCGC 4 cut(s) 114, 129, 147, 157
Cfr10I RCCGGY 2 cut(s) 598, 1698
Cfr13I GGNCC 5 cut(s) 305, 332, 659, 1093, 1376
CseI GACGC 4 cut(s) 155, 233, 1273, 1588
Csp6I GTAC 2 cut(s) 869, 1008
CviQI GTAC 2 cut(s) 869, 1008
DdeI CTNAG 4 cut(s) 624, 909, 1089, 1508
DinI GGCGCC 1 cut(s) 156
DpnI GATC 4 cut(s) 535, 1203, 1211, 1506
DpnII GATC 4 cut(s) 533, 1201, 1209, 1504
DrdI GACNNNNNNGTC 1 cut(s) 359
DseDI GACNNNNNNGTC 1 cut(s) 359
EaeI YGGCCR 4 cut(s) 596, 675, 681, 969
Eco130I CCWWGG 5 cut(s) 637, 672, 852, 966, 1172
Eco147I AGGCCT 1 cut(s) 671
Eco32I GATATC 1 cut(s) 441
Eco47I GGWCC 3 cut(s) 305, 659, 1376
Eco57I CTGAAG 1 cut(s) 1707
Eco81I CCTNAGG 1 cut(s) 1089
EcoO109I RGGNCCY 1 cut(s) 659
EcoRV GATATC 1 cut(s) 441
EcoT14I CCWWGG 5 cut(s) 637, 672, 852, 966, 1172
EcoT22I ATGCAT 1 cut(s) 1227
EgeI GGCGCC 1 cut(s) 156
EheI GGCGCC 1 cut(s) 156
ErhI CCWWGG 5 cut(s) 637, 672, 852, 966, 1172
Esp3I CGTCTC 1 cut(s) 47
FauI CCCGC 2 cut(s) 316, 1103
FauNDI CATATG 1 cut(s) 269
FbaI TGATCA 1 cut(s) 1201
Fnu4HI GCNGC 9 cut(s) 110, 331, 393, 558, 561, 721, 750, 882, 972
FokI GGATG 2 cut(s) 1548, 1682
Fsp4HI GCNGC 9 cut(s) 110, 331, 393, 558, 561, 721, 750, 882, 972
FspBI CTAG 1 cut(s) 1454
GlaI GCGC 4 cut(s) 113, 128, 146, 156
GluI GCNGC 9 cut(s) 110, 331, 393, 558, 561, 721, 750, 882, 972
GsuI CTGGAG 1 cut(s) 870
HaeII RGCGCY 1 cut(s) 158
HaeIII GGCC 7 cut(s) 333, 598, 671, 677, 683, 971, 1094
HapII CCGG 3 cut(s) 599, 1055, 1699
HgaI GACGC 4 cut(s) 155, 233, 1273, 1588
HhaI GCGC 4 cut(s) 114, 129, 147, 157
Hin1I GRCGYC 5 cut(s) 155, 166, 947, 1265, 1599
Hin6I GCGC 4 cut(s) 112, 127, 145, 155
HinP1I GCGC 4 cut(s) 112, 127, 145, 155
HpaII CCGG 3 cut(s) 599, 1055, 1699
HphI GGTGA 5 cut(s) 17, 26, 84, 716, 1031
Hpy166II GTNNAC 3 cut(s) 300, 1008, 1553
Hpy188III TCNNGA 1 cut(s) 985
Hpy8I GTNNAC 3 cut(s) 300, 1008, 1553
Hpy99I CGWCG 4 cut(s) 171, 224, 227, 949
HpyAV CCTTC 8 cut(s) 83, 93, 106, 206, 277, 661, 1347, 1431
HpyCH4III ACNGT 3 cut(s) 358, 868, 1012
HpyCH4IV ACGT 2 cut(s) 573, 947
HpyF10VI GCNNNNNNNGC 8 cut(s) 163, 233, 521, 599, 629, 749, 755, 1231
HpyF3I CTNAG 4 cut(s) 624, 909, 1089, 1508
HpySE526I ACGT 2 cut(s) 573, 947
Hsp92I GRCGYC 5 cut(s) 155, 166, 947, 1265, 1599
HspAI GCGC 4 cut(s) 112, 127, 145, 155
KasI GGCGCC 1 cut(s) 154
KroI GCCGGC 1 cut(s) 598
KroNI GCCGGC 1 cut(s) 600
Ksp22I TGATCA 1 cut(s) 1201
Kzo9I GATC 4 cut(s) 533, 1201, 1209, 1504
LmnI GCTCC 4 cut(s) 152, 264, 889, 1127
Lsp1109I GCAGC 6 cut(s) 379, 544, 572, 732, 761, 868
LweI GCATC 4 cut(s) 476, 697, 1212, 1526
MaeI CTAG 1 cut(s) 1454
MaeII ACGT 2 cut(s) 573, 947
MaeIII GTNAC 4 cut(s) 170, 818, 1110, 1261
MalI GATC 4 cut(s) 535, 1203, 1211, 1506
MbiI CCGCTC 1 cut(s) 974
MboI GATC 4 cut(s) 533, 1201, 1209, 1504
MboII GAAGA 2 cut(s) 493, 1700
MflI RGATCY 1 cut(s) 1504
MhlI GDGCHC 2 cut(s) 517, 1555
MlsI TGGCCA 1 cut(s) 683
MluCI AATT 2 cut(s) 251, 1058
MluNI TGGCCA 1 cut(s) 683
Mly113I GGCGCC 1 cut(s) 155
MlyI GAGTC 5 cut(s) 268, 352, 1266, 1409, 1639
MmeI TCCRAC 2 cut(s) 242, 1138
Mox20I TGGCCA 1 cut(s) 683
Mph1103I ATGCAT 1 cut(s) 1227
MroNI GCCGGC 1 cut(s) 598
MscI TGGCCA 1 cut(s) 683
MseI TTAA 7 cut(s) 116, 182, 240, 479, 1343, 1416, 1445
MslI CAYNNNNRTG 1 cut(s) 715
Msp20I TGGCCA 1 cut(s) 683
MspI CCGG 3 cut(s) 599, 1055, 1699
Mva1269I GAATGC 1 cut(s) 547
MvnI CGCG 2 cut(s) 112, 127
MwoI GCNNNNNNNGC 8 cut(s) 163, 233, 521, 599, 629, 749, 755, 1231
NaeI GCCGGC 1 cut(s) 600
NarI GGCGCC 1 cut(s) 155
NcoI CCATGG 2 cut(s) 966, 1172
NdeI CATATG 1 cut(s) 269
NdeII GATC 4 cut(s) 533, 1201, 1209, 1504
NgoMIV GCCGGC 1 cut(s) 598
NlaIV GGNNCC 3 cut(s) 156, 307, 660
NmeAIII GCCGAG 1 cut(s) 131
NmuCI GTSAC 2 cut(s) 1110, 1261
NsiI ATGCAT 1 cut(s) 1227
NspI RCATGY 2 cut(s) 1006, 1167
OliI CACNNNNGTG 1 cut(s) 715
PagI TCATGA 1 cut(s) 984
PceI AGGCCT 1 cut(s) 671
PciI ACATGT 1 cut(s) 1163
PctI GAATGC 1 cut(s) 547
PdiI GCCGGC 1 cut(s) 600
PfeI GAWTC 6 cut(s) 274, 498, 588, 650, 1075, 1450
PflFI GACNNNGTC 1 cut(s) 356
PkrI GCNGC 9 cut(s) 111, 332, 394, 559, 562, 722, 751, 883, 973
PleI GAGTC 5 cut(s) 267, 351, 1266, 1408, 1638
PluTI GGCGCC 1 cut(s) 158
PpsI GAGTC 5 cut(s) 267, 351, 1266, 1408, 1638
PpuMI RGGWCCY 1 cut(s) 659
PscI ACATGT 1 cut(s) 1163
PsiI TTATAA 2 cut(s) 692, 896
Psp5II RGGWCCY 1 cut(s) 659
PspN4I GGNNCC 3 cut(s) 156, 307, 660
PspPI GGNCC 5 cut(s) 305, 332, 659, 1093, 1376
PspPPI RGGWCCY 1 cut(s) 659
PstI CTGCAG 1 cut(s) 562
PsuI RGATCY 1 cut(s) 1504
PsyI GACNNNGTC 1 cut(s) 356
RsaI GTAC 2 cut(s) 870, 1009
RsaNI GTAC 2 cut(s) 869, 1008
RseI CAYNNNNRTG 1 cut(s) 715
SaqAI TTAA 7 cut(s) 116, 182, 240, 479, 1343, 1416, 1445
SatI GCNGC 9 cut(s) 110, 331, 393, 558, 561, 721, 750, 882, 972
Sau3AI GATC 4 cut(s) 533, 1201, 1209, 1504
Sau96I GGNCC 5 cut(s) 305, 332, 659, 1093, 1376
ScaI AGTACT 1 cut(s) 870
SchI GAGTC 5 cut(s) 268, 352, 1266, 1409, 1639
SduI GDGCHC 2 cut(s) 517, 1555
SfaNI GCATC 4 cut(s) 476, 697, 1212, 1526
SfcI CTRYAG 1 cut(s) 558
SfoI GGCGCC 1 cut(s) 156
SinI GGWCC 3 cut(s) 305, 659, 1376
SmiMI CAYNNNNRTG 1 cut(s) 715
SmlI CTYRAG 2 cut(s) 1106, 1282
SmoI CTYRAG 2 cut(s) 1106, 1282
Sse9I AATT 2 cut(s) 251, 1058
SseBI AGGCCT 1 cut(s) 671
SsiI CCGC 7 cut(s) 61, 110, 236, 309, 330, 972, 1096
SspDI GGCGCC 1 cut(s) 154
SspMI CTAG 1 cut(s) 1454
StuI AGGCCT 1 cut(s) 671
StyI CCWWGG 5 cut(s) 637, 672, 852, 966, 1172
TaaI ACNGT 3 cut(s) 358, 868, 1012
TaiI ACGT 2 cut(s) 576, 950
TaqI TCGA 2 cut(s) 207, 384
TaqII GACCGA 1 cut(s) 356
TasI AATT 2 cut(s) 251, 1058
TatI WGTACW 2 cut(s) 868, 1007
TauI GCSGC 3 cut(s) 112, 333, 974
TfiI GAWTC 6 cut(s) 274, 498, 588, 650, 1075, 1450
Tru1I TTAA 7 cut(s) 116, 182, 240, 479, 1343, 1416, 1445
Tru9I TTAA 7 cut(s) 116, 182, 240, 479, 1343, 1416, 1445
TscAI CASTG 6 cut(s) 307, 361, 691, 1017, 1282, 1324
TseFI GTSAC 2 cut(s) 1110, 1261
TseI GCWGC 6 cut(s) 392, 557, 560, 720, 749, 881
Tsp45I GTSAC 2 cut(s) 1110, 1261
TspDTI ATGAA 8 cut(s) 225, 296, 438, 498, 659, 1329, 1404, 1463
TspRI CASTG 6 cut(s) 307, 361, 691, 1017, 1282, 1324
Tth111I GACNNNGTC 1 cut(s) 356
VneI GTGCAC 1 cut(s) 1551
VpaK11BI GGWCC 3 cut(s) 305, 659, 1376
XapI RAATTY 1 cut(s) 1058
XceI RCATGY 2 cut(s) 1006, 1167
XspI CTAG 1 cut(s) 1454
ZraI GACGTC 1 cut(s) 948
ZrmI AGTACT 1 cut(s) 870
Zsp2I ATGCAT 1 cut(s) 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.