Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0003349

Physical Location & Seq

Genomic Coordinates Forward (+)

15729119 .. 15734149

Gene Structure 5031 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g12150.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGCCTCCATCCTCTCCAAGAAGCAGAAGCAGAAGCAAAAAAGCACCAAGCTTTCCGACCTAAAAACACTAGGGAACCAGCTCCTCTCGTCCCGGGCCCACATCAACAACCTCCCTAAGCTTCTCTCATTCGTCTCCCCGGCCTCGCCGCCTCAGTTCGTCGTCGAGTCCCTCCTCTCTCTCCAGTCCTTCTTTACCCCTCTCCTTCCCGACCTACCTCCCTCCTCCTCCAAGCCTTCCGCCGCCGATGGCTCCCATGACGACCCCGACTTCATATACCGCACCTGGCTCCGCTCCAAGTTCGACGAGCTCGTTGAGGCCCTCGTCGAAGTCCTGCTTTCGCCGCAATCTGACGAAACTCTCAAGGAGGTGGTGTTGGACACGATAATGGAGTTTGTGAAGTTCGGAAATGGCGGAAAGTTTCACTCTGCAATGTACCATAGGCTGCTTCGTAGTATTGTTTACACTACAGAACCGGTTAATTTGTTGTTAGACTTGCTCTCATCCAAGTATTTCAAGTATATCGATGTCCGTTATTTTACCTACATTAGCTTTGAAAAGCTTGCTAAAATTCTGGATGCAAACGGCATTTCTGAGGACAAAAACGTGAAGAAAGACGGCAATGATGGGGAGCATCCCAGCAAAAGCATGGATCAAGTAATTCACAAGATTCATTATTTGATATCACACATCCCATCTCTGGAAAGCTCAGTTGAAAAAACTGATCATGAGATGTGGAGTGGATCAGGTGAATATGAAGGGCTTGCTGGGAAGATGAAGGCAGATGGTAAACAGCACAAGACTGAGAAGCAGAAGGATAAGGTCTTGTCTGCGGACAATATTGCCAAAAAGATGAAATTGAAATTTACTAAAGCATGGTTATCATTTCTAAGGTTACCACTTCCAATTGATGTGTACAAGGAGGTTCTTGCCACTCTCCATCAGGCAGTCATTCCTTTCTTAGCCAACCCCGTCTTGTTATGTGACTTCTTAACTCGATCATATGACATTGGTGGTGTTATTAGTGTCATGGCTCTTAGCAGTCTCTTTATCCTCATGACACAACATGGTTTAGAGTACCCCAACTTTTATGAGAAACTTTATGCATTACTGGTTCCCTCTATTTTTATGGCAAAGCATCGATCAAAGTTTTTTCAGCTTGTAGATGCTTGCTTAAAATCACCACTTCTTCCTGCATATTTGGCTGCTGCTTTTGCCAAGAAATTGAGTAGGCTGTCAATCTCAGTTCCTCCGTCTGGAGCATTAGTTATTATTGTGCTGGTTCATAATCTTCTACGGAGACATCCTTCAATCAATTGCTTGGTGAATCGGGGAGGTGGTGGTGAAACTGTGAAAGATGATCCAGAAGCAGAACAGAGGGCTGCTGATGGCGCCGATGGCACTGGAACTGGTTCAGCAGATAAGTCAATCAAAAAATCAGGCATGGATCCTTTTGATAATGAACAAAGTGATCCTATGAAATCAAATGCCATGAGAAGCTCACTTTGGGAGATTGATACCCTCCGTCACCACTACTGCCCTGCTGTTTCAAGGTTTGTTTTGTCACTCGAGAATGATTTGACAGTCAGAGCCAAAACCACTGAAATATCTGTTGAAGATTTTAGCTCAGGTTCATATGCGACAATATTTGGAGAGCAGGTGAGACGAAGGATAAAGTCAGCTCCACTAGCATACTACAAAGCAGCTCCGACCTCTTTGTTCTCAGACTCCGAGTCTCAGTTTCCCGGTTGGACTTTCACGTGTGAAGACAGTAAGCGAAAGAACGACAGCGCTGATGAGAACGGGAAAATAGATAAAGAACGTGACCATAGTCCGGTCAAACGACAACGCGTCAAGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBF

Protein Analysis

621

Amino Acids

69.32

Weight (kDa)

8.74

Isoelectric Point (pI)

49.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17250
fragaria_vesca	FvH4_2g16780 FvH4_2g16780 FvH4_2g16780 FvH4_2g16780 FvH4_2g16780
malus_domestica	MD05G1138800.v1.1 MD10G1141700.v1.1 MD11G1014400.v1.1
prunus_persica	Prupe.8G180000_v2.0.a1
pyrus_communis	pycom10g12150
rosa_chinensis	RchiOBHm_Chr1g0336401 RchiOBHm_Chr6g0280901 RchiOBHm_Chr7g0239681
rosa_laevigata	RLG00000000928 RLG00000000950 RLG00000009676 RLG00000013018 RLG00000021242 RLG00000023914
rosa_multiflora	Rmu_sc0004772.1_g000005
rosa_roxburghii	Rroxscaffold_1G00031900 Rroxscaffold_5G00366860 Rroxscaffold_7G00187510
rosa_rugosa	Rorug06G0049800 Rorug06G0136100
rosa_samantha	Rh1CG252200 Rh3BG154100 Rh3CG270200 Rh4AG229500 Rh6AG249000 Rh6BG250900 Rh6CG251700 Rh6DG243400 Rh7AG482800
rosa_wichuraiana	Rw6G021530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1648
Acc36I	ACCTGC	1 cut(s)	1648
AccB1I	GGYRCC	1 cut(s)	1391
AccBSI	CCGCTC	1 cut(s)	294
AccII	CGCG	1 cut(s)	1851
AciI	CCGC	8 cut(s)	149, 240, 243, 280, 292, 344, 414, 833
AclWI	GGATC	6 cut(s)	660, 751, 1355, 1442, 1455, 1466
AcsI	RAATTY	2 cut(s)	570, 863
AcvI	CACGTG	1 cut(s)	1761
AcyI	GRCGYC	1 cut(s)	1392
AfaI	GTAC	3 cut(s)	437, 917, 1079
AfeI	AGCGCT	1 cut(s)	1792
AfiI	CCNNNNNNNGG	3 cut(s)	700, 1256, 1834
AflIII	ACRYGT	2 cut(s)	1760, 1849
AgeI	ACCGGT	1 cut(s)	475
AgsI	TTSAA	7 cut(s)	517, 557, 716, 862, 1311, 1551, 1616
AhdI	GACNNNNNGTC	2 cut(s)	1732, 1850
AjnI	CCWGG	1 cut(s)	284
AjuI	GAANNNNNNNTTGG	2 cut(s)	1489, 1521
Alw21I	GWGCWC	1 cut(s)	312
Alw26I	GTCTC	5 cut(s)	139, 1049, 1294, 1657, 1740
AlwI	GGATC	6 cut(s)	660, 751, 1355, 1442, 1455, 1466
Ama87I	CYCGRG	2 cut(s)	93, 1568
Aor51HI	AGCGCT	1 cut(s)	1792
AoxI	GGCC	4 cut(s)	3, 96, 141, 318
ApaI	GGGCCC	1 cut(s)	100
ApeKI	GCWGC	5 cut(s)	445, 1205, 1208, 1382, 1703
ApoI	RAATTY	2 cut(s)	570, 863
AsiGI	ACCGGT	1 cut(s)	475
Asp700I	GAANNNNTTC	1 cut(s)	1411
AspLEI	GCGC	2 cut(s)	1394, 1793
AspS9I	GGNCC	3 cut(s)	96, 97, 319
AsuC2I	CCSGG	4 cut(s)	94, 95, 140, 1746
AsuHPI	GGTGA	6 cut(s)	761, 1173, 1336, 1355, 1520, 1672
AvaI	CYCGRG	2 cut(s)	93, 1568
BaeGI	GKGCMC	1 cut(s)	100
BamHI	GGATCC	1 cut(s)	1447
BanI	GGYRCC	1 cut(s)	1391
BanII	GRGCYC	2 cut(s)	100, 312
BbrPI	CACGTG	1 cut(s)	1761
BbsI	GAAGAC	1 cut(s)	1773
Bbv12I	GWGCWC	1 cut(s)	312
BbvI	GCAGC	5 cut(s)	432, 1192, 1195, 1369, 1715
BccI	CCATC	8 cut(s)	17, 242, 620, 703, 779, 948, 1382, 1391
BceAI	ACGGC	2 cut(s)	601, 634
BciT130I	CCWGG	1 cut(s)	286
BclI	TGATCA	1 cut(s)	724
BcnI	CCSGG	4 cut(s)	94, 95, 140, 1746
BcoDI	GTCTC	5 cut(s)	139, 1049, 1294, 1657, 1740
BfaI	CTAG	2 cut(s)	71, 1688
BfmI	CTRYAG	1 cut(s)	468
BfoI	RGCGCY	2 cut(s)	1395, 1794
BfuAI	ACCTGC	1 cut(s)	1648
BisI	GCNGC	8 cut(s)	149, 243, 344, 446, 1206, 1209, 1383, 1704
BlsI	GCNGC	8 cut(s)	150, 244, 345, 447, 1207, 1210, 1384, 1705
Bme1390I	CCNGG	5 cut(s)	94, 95, 140, 286, 1746
BmeRI	GACNNNNNGTC	2 cut(s)	1732, 1850
BmeT110I	CYCGRG	2 cut(s)	93, 1568
BmgT120I	GGNCC	3 cut(s)	96, 97, 319
BmiI	GGNNCC	7 cut(s)	77, 98, 253, 290, 1116, 1393, 1449
BmrFI	CCNGG	5 cut(s)	94, 95, 140, 286, 1746
BmsI	GCATC	4 cut(s)	568, 643, 1147, 1156
BoxI	GACNNNNGTC	1 cut(s)	1830
BpiI	GAAGAC	1 cut(s)	1773
BpmI	CTGGAG	2 cut(s)	167, 1278
Bpu10I	CCTNAGC	2 cut(s)	117, 1627
BpuEI	CTTGAG	1 cut(s)	347
BpuMI	CCSGG	4 cut(s)	94, 95, 140, 1746
Bsa29I	ATCGAT	2 cut(s)	525, 1141
BsaAI	YACGTR	1 cut(s)	1761
BsaHI	GRCGYC	1 cut(s)	1392
BsaJI	CCNNGG	2 cut(s)	93, 138
BsaWI	WCCGGW	2 cut(s)	475, 1834
BsaXI	ACNNNNNCTCC	6 cut(s)	359, 389, 1251, 1281, 1644, 1674
Bsc4I	CCNNNNNNNGG	3 cut(s)	700, 1256, 1834
Bse118I	RCCGGY	1 cut(s)	475
Bse1I	ACTGG	4 cut(s)	184, 1116, 1408, 1414
Bse3DI	GCAATG	2 cut(s)	438, 628
BseBI	CCWGG	1 cut(s)	286
BseCI	ATCGAT	2 cut(s)	525, 1141
BseDI	CCNNGG	2 cut(s)	93, 138
BseGI	GGATG	6 cut(s)	9, 503, 583, 634, 690, 1303
BseLI	CCNNNNNNNGG	3 cut(s)	700, 1256, 1834
BseMI	GCAATG	2 cut(s)	438, 628
BseMII	CTCAG	8 cut(s)	167, 585, 723, 795, 1257, 1641, 1737, 1751
BseNI	ACTGG	4 cut(s)	184, 1116, 1408, 1414
BseRI	GAGGAG	4 cut(s)	74, 164, 214, 217
BseSI	GKGCMC	1 cut(s)	100
BseXI	GCAGC	5 cut(s)	432, 1192, 1195, 1369, 1715
BseYI	CCCAGC	2 cut(s)	638, 767
Bsh1236I	CGCG	1 cut(s)	1851
BshFI	GGCC	4 cut(s)	5, 98, 143, 320
BshNI	GGYRCC	1 cut(s)	1391
BshTI	ACCGGT	1 cut(s)	475
BshVI	ATCGAT	2 cut(s)	525, 1141
BsiHKAI	GWGCWC	1 cut(s)	312
BsiHKCI	CYCGRG	2 cut(s)	93, 1568
BsiSI	CCGG	5 cut(s)	94, 140, 476, 1746, 1835
BslFI	GGGAC	2 cut(s)	76, 154
BslI	CCNNNNNNNGG	3 cut(s)	700, 1256, 1834
BsmAI	GTCTC	5 cut(s)	139, 1049, 1294, 1657, 1740
BsmBI	CGTCTC	2 cut(s)	139, 1657
BsmFI	GGGAC	2 cut(s)	76, 154
BsnI	GGCC	4 cut(s)	5, 98, 143, 320
BsoBI	CYCGRG	2 cut(s)	93, 1568
Bsp120I	GGGCCC	1 cut(s)	96
Bsp1286I	GDGCHC	2 cut(s)	100, 312
Bsp1407I	TGTACA	1 cut(s)	915
Bsp143I	GATC	8 cut(s)	652, 724, 743, 998, 1142, 1360, 1447, 1471
BspACI	CCGC	8 cut(s)	149, 240, 243, 280, 292, 344, 414, 833
BspANI	GGCC	4 cut(s)	5, 98, 143, 320
BspCNI	CTCAG	8 cut(s)	166, 586, 722, 796, 1256, 1640, 1736, 1750
BspDI	ATCGAT	2 cut(s)	525, 1141
BspFNI	CGCG	1 cut(s)	1851
BspHI	TCATGA	2 cut(s)	727, 1056
BspLI	GGNNCC	7 cut(s)	77, 98, 253, 290, 1116, 1393, 1449
BspMI	ACCTGC	1 cut(s)	1648
BspPI	GGATC	6 cut(s)	660, 751, 1355, 1442, 1455, 1466
BspT107I	GGYRCC	1 cut(s)	1391
BsrBI	CCGCTC	1 cut(s)	294
BsrDI	GCAATG	2 cut(s)	438, 628
BsrFI	RCCGGY	1 cut(s)	475
BsrGI	TGTACA	1 cut(s)	915
BsrI	ACTGG	4 cut(s)	184, 1116, 1408, 1414
BssAI	RCCGGY	1 cut(s)	475
BssECI	CCNNGG	2 cut(s)	93, 138
BssMI	GATC	8 cut(s)	652, 724, 743, 998, 1142, 1360, 1447, 1471
BssNI	GRCGYC	1 cut(s)	1392
Bst2UI	CCWGG	1 cut(s)	286
Bst4CI	ACNGT	3 cut(s)	1351, 1585, 1772
BstACI	GRCGYC	1 cut(s)	1392
BstAUI	TGTACA	1 cut(s)	915
BstBAI	YACGTR	1 cut(s)	1761
BstC8I	GCNNGC	3 cut(s)	564, 765, 1171
BstEII	GGTNACC	1 cut(s)	894
BstF5I	GGATG	6 cut(s)	9, 503, 583, 634, 690, 1303
BstFNI	CGCG	1 cut(s)	1851
BstH2I	RGCGCY	2 cut(s)	1395, 1794
BstHHI	GCGC	2 cut(s)	1394, 1793
BstKTI	GATC	8 cut(s)	655, 727, 746, 1001, 1145, 1363, 1450, 1474
BstMAI	GTCTC	5 cut(s)	139, 1049, 1294, 1657, 1740
BstMBI	GATC	8 cut(s)	652, 724, 743, 998, 1142, 1360, 1447, 1471
BstMWI	GCNNNNNNNGC	7 cut(s)	343, 1202, 1214, 1391, 1398, 1688, 1857
BstNI	CCWGG	1 cut(s)	286
BstPAI	GACNNNNGTC	1 cut(s)	1830
BstPI	GGTNACC	1 cut(s)	894
BstSCI	CCNGG	5 cut(s)	92, 93, 138, 284, 1744
BstSFI	CTRYAG	1 cut(s)	468
BstSLI	GKGCMC	1 cut(s)	100
BstUI	CGCG	1 cut(s)	1851
BstV1I	GCAGC	5 cut(s)	432, 1192, 1195, 1369, 1715
BstV2I	GAAGAC	1 cut(s)	1773
BstX2I	RGATCY	1 cut(s)	1447
BstYI	RGATCY	1 cut(s)	1447
Bsu15I	ATCGAT	2 cut(s)	525, 1141
BsuRI	GGCC	4 cut(s)	5, 98, 143, 320
BsuTUI	ATCGAT	2 cut(s)	525, 1141
BtsCI	GGATG	6 cut(s)	9, 503, 583, 634, 690, 1303
BtsIMutI	CAGTG	2 cut(s)	1401, 1599
BveI	ACCTGC	1 cut(s)	1648
Cac8I	GCNNGC	3 cut(s)	564, 765, 1171
CciI	TCATGA	2 cut(s)	727, 1056
CfoI	GCGC	2 cut(s)	1394, 1793
Cfr10I	RCCGGY	1 cut(s)	475
Cfr13I	GGNCC	3 cut(s)	96, 97, 319
Cfr9I	CCCGGG	1 cut(s)	93
ClaI	ATCGAT	2 cut(s)	525, 1141
CseI	GACGC	1 cut(s)	1840
Csp6I	GTAC	3 cut(s)	436, 916, 1078
CspAI	ACCGGT	1 cut(s)	475
CviAII	CATG	9 cut(s)	257, 649, 728, 876, 1030, 1057, 1067, 1444, 1492
CviQI	GTAC	3 cut(s)	436, 916, 1078
DinI	GGCGCC	1 cut(s)	1393
DpnI	GATC	8 cut(s)	654, 726, 745, 1000, 1144, 1362, 1449, 1473
DpnII	GATC	8 cut(s)	652, 724, 743, 998, 1142, 1360, 1447, 1471
DriI	GACNNNNNGTC	2 cut(s)	1732, 1850
Eam1105I	GACNNNNNGTC	2 cut(s)	1732, 1850
EciI	GGCGGA	2 cut(s)	229, 429
Ecl136II	GAGCTC	1 cut(s)	310
Eco24I	GRGCYC	2 cut(s)	100, 312
Eco32I	GATATC	1 cut(s)	684
Eco47III	AGCGCT	1 cut(s)	1792
Eco53kI	GAGCTC	1 cut(s)	310
Eco72I	CACGTG	1 cut(s)	1761
Eco88I	CYCGRG	2 cut(s)	93, 1568
Eco91I	GGTNACC	1 cut(s)	894
EcoICRI	GAGCTC	1 cut(s)	310
EcoO109I	RGGNCCY	1 cut(s)	319
EcoO65I	GGTNACC	1 cut(s)	894
EcoRII	CCWGG	1 cut(s)	284
EcoRV	GATATC	1 cut(s)	684
EcoT22I	ATGCAT	1 cut(s)	1108
EcoT38I	GRGCYC	2 cut(s)	100, 312
EgeI	GGCGCC	1 cut(s)	1393
EheI	GGCGCC	1 cut(s)	1393
Esp3I	CGTCTC	2 cut(s)	139, 1657
FaeI	CATG	9 cut(s)	260, 652, 731, 879, 1033, 1060, 1070, 1447, 1495
FalI	AAGNNNNNCTT	2 cut(s)	321, 353
FaqI	GGGAC	2 cut(s)	76, 154
FatI	CATG	9 cut(s)	256, 648, 727, 875, 1029, 1056, 1066, 1443, 1491
FauNDI	CATATG	2 cut(s)	1003, 1636
FbaI	TGATCA	1 cut(s)	724
Fnu4HI	GCNGC	8 cut(s)	149, 243, 344, 446, 1206, 1209, 1383, 1704
FokI	GGATG	5 cut(s)	490, 590, 621, 677, 1290
FriOI	GRGCYC	2 cut(s)	100, 312
Fsp4HI	GCNGC	8 cut(s)	149, 243, 344, 446, 1206, 1209, 1383, 1704
FspBI	CTAG	2 cut(s)	71, 1688
GlaI	GCGC	2 cut(s)	1393, 1792
GluI	GCNGC	8 cut(s)	149, 243, 344, 446, 1206, 1209, 1383, 1704
GsaI	CCCAGC	2 cut(s)	642, 771
GsuI	CTGGAG	2 cut(s)	167, 1278
HaeII	RGCGCY	2 cut(s)	1395, 1794
HaeIII	GGCC	4 cut(s)	5, 98, 143, 320
HapII	CCGG	5 cut(s)	94, 140, 476, 1746, 1835
HgaI	GACGC	1 cut(s)	1840
HhaI	GCGC	2 cut(s)	1394, 1793
Hin1I	GRCGYC	1 cut(s)	1392
Hin1II	CATG	9 cut(s)	260, 652, 731, 879, 1033, 1060, 1070, 1447, 1495
Hin6I	GCGC	2 cut(s)	1392, 1791
HinP1I	GCGC	2 cut(s)	1392, 1791
HindIII	AAGCTT	3 cut(s)	50, 119, 560
HinfI	GANTC	5 cut(s)	167, 670, 1327, 1727, 1733
HpaII	CCGG	5 cut(s)	94, 140, 476, 1746, 1835
HphI	GGTGA	6 cut(s)	761, 1173, 1336, 1355, 1520, 1672
Hpy166II	GTNNAC	3 cut(s)	463, 791, 916
Hpy188I	TCNGA	8 cut(s)	58, 352, 407, 595, 1589, 1710, 1726, 1732
Hpy188III	TCNNGA	8 cut(s)	209, 575, 701, 728, 1057, 1257, 1364, 1570
Hpy8I	GTNNAC	3 cut(s)	463, 791, 916
Hpy99I	CGWCG	4 cut(s)	164, 167, 308, 329
HpyAV	CCTTC	8 cut(s)	199, 215, 246, 752, 772, 808, 1317, 1662
HpyCH4III	ACNGT	3 cut(s)	1351, 1585, 1772
HpyCH4IV	ACGT	3 cut(s)	606, 1760, 1822
HpyCH4V	TGCA	4 cut(s)	431, 581, 1106, 1196
HpyF10VI	GCNNNNNNNGC	7 cut(s)	343, 1202, 1214, 1391, 1398, 1688, 1857
HpySE526I	ACGT	3 cut(s)	606, 1760, 1822
Hsp92I	GRCGYC	1 cut(s)	1392
Hsp92II	CATG	9 cut(s)	260, 652, 731, 879, 1033, 1060, 1070, 1447, 1495
HspAI	GCGC	2 cut(s)	1392, 1791
KasI	GGCGCC	1 cut(s)	1391
Ksp22I	TGATCA	1 cut(s)	724
Kzo9I	GATC	8 cut(s)	652, 724, 743, 998, 1142, 1360, 1447, 1471
LmnI	GCTCC	8 cut(s)	87, 257, 294, 299, 631, 1259, 1687, 1711
Lsp1109I	GCAGC	5 cut(s)	432, 1192, 1195, 1369, 1715
LweI	GCATC	4 cut(s)	568, 643, 1147, 1156
MaeI	CTAG	2 cut(s)	71, 1688
MaeII	ACGT	3 cut(s)	606, 1760, 1822
MaeIII	GTNAC	5 cut(s)	894, 983, 1526, 1563, 1823
MalI	GATC	8 cut(s)	654, 726, 745, 1000, 1144, 1362, 1449, 1473
MbiI	CCGCTC	1 cut(s)	294
MboI	GATC	8 cut(s)	652, 724, 743, 998, 1142, 1360, 1447, 1471
MboII	GAAGA	6 cut(s)	622, 784, 1181, 1283, 1628, 1778
MfeI	CAATTG	2 cut(s)	906, 1315
MflI	RGATCY	1 cut(s)	1447
MhlI	GDGCHC	2 cut(s)	100, 312
MluCI	AATT	8 cut(s)	481, 570, 660, 857, 863, 906, 1223, 1315
MluI	ACGCGT	1 cut(s)	1849
Mly113I	GGCGCC	1 cut(s)	1392
MlyI	GAGTC	3 cut(s)	176, 1721, 1742
MmeI	TCCRAC	4 cut(s)	81, 357, 1730, 1733
Mph1103I	ATGCAT	1 cut(s)	1108
MroXI	GAANNNNTTC	1 cut(s)	1411
MseI	TTAA	3 cut(s)	480, 992, 1175
MslI	CAYNNNNRTG	1 cut(s)	386
MspI	CCGG	5 cut(s)	94, 140, 476, 1746, 1835
MspR9I	CCNGG	5 cut(s)	94, 95, 140, 286, 1746
MunI	CAATTG	2 cut(s)	906, 1315
MvaI	CCWGG	1 cut(s)	286
MvnI	CGCG	1 cut(s)	1851
MwoI	GCNNNNNNNGC	7 cut(s)	343, 1202, 1214, 1391, 1398, 1688, 1857
NarI	GGCGCC	1 cut(s)	1392
NciI	CCSGG	4 cut(s)	94, 95, 140, 1746
NdeI	CATATG	2 cut(s)	1003, 1636
NdeII	GATC	8 cut(s)	652, 724, 743, 998, 1142, 1360, 1447, 1471
NlaIII	CATG	9 cut(s)	260, 652, 731, 879, 1033, 1060, 1070, 1447, 1495
NlaIV	GGNNCC	7 cut(s)	77, 98, 253, 290, 1116, 1393, 1449
NmuCI	GTSAC	4 cut(s)	983, 1526, 1563, 1823
NsiI	ATGCAT	1 cut(s)	1108
PaeR7I	CTCGAG	1 cut(s)	1568
PagI	TCATGA	2 cut(s)	727, 1056
PaqCI	CACCTGC	1 cut(s)	1648
PcsI	WCGNNNNNNNCGW	1 cut(s)	309
PdmI	GAANNNNTTC	1 cut(s)	1411
PfeI	GAWTC	2 cut(s)	670, 1327
PinAI	ACCGGT	1 cut(s)	475
PkrI	GCNGC	8 cut(s)	150, 244, 345, 447, 1207, 1210, 1384, 1705
PleI	GAGTC	3 cut(s)	175, 1721, 1741
PluTI	GGCGCC	1 cut(s)	1395
PmaCI	CACGTG	1 cut(s)	1761
PmlI	CACGTG	1 cut(s)	1761
PpsI	GAGTC	3 cut(s)	175, 1721, 1741
Ppu21I	YACGTR	1 cut(s)	1761
PshAI	GACNNNNGTC	1 cut(s)	1830
Psp124BI	GAGCTC	1 cut(s)	312
Psp6I	CCWGG	1 cut(s)	284
PspCI	CACGTG	1 cut(s)	1761
PspEI	GGTNACC	1 cut(s)	894
PspFI	CCCAGC	2 cut(s)	638, 767
PspGI	CCWGG	1 cut(s)	284
PspN4I	GGNNCC	7 cut(s)	77, 98, 253, 290, 1116, 1393, 1449
PspOMI	GGGCCC	1 cut(s)	96
PspPI	GGNCC	3 cut(s)	96, 97, 319
PsuI	RGATCY	1 cut(s)	1447
RsaI	GTAC	3 cut(s)	437, 917, 1079
RsaNI	GTAC	3 cut(s)	436, 916, 1078
RseI	CAYNNNNRTG	1 cut(s)	386
SacI	GAGCTC	1 cut(s)	312
SaqAI	TTAA	3 cut(s)	480, 992, 1175
SatI	GCNGC	8 cut(s)	149, 243, 344, 446, 1206, 1209, 1383, 1704
Sau3AI	GATC	8 cut(s)	652, 724, 743, 998, 1142, 1360, 1447, 1471
Sau96I	GGNCC	3 cut(s)	96, 97, 319
SchI	GAGTC	3 cut(s)	176, 1721, 1742
ScrFI	CCNGG	5 cut(s)	94, 95, 140, 286, 1746
SduI	GDGCHC	2 cut(s)	100, 312
SfaNI	GCATC	4 cut(s)	568, 643, 1147, 1156
SfcI	CTRYAG	1 cut(s)	468
SfoI	GGCGCC	1 cut(s)	1393
Sfr274I	CTCGAG	1 cut(s)	1568
SlaI	CTCGAG	1 cut(s)	1568
SmaI	CCCGGG	1 cut(s)	95
SmiMI	CAYNNNNRTG	1 cut(s)	386
SmlI	CTYRAG	2 cut(s)	362, 1568
SmoI	CTYRAG	2 cut(s)	362, 1568
Sse9I	AATT	8 cut(s)	481, 570, 660, 857, 863, 906, 1223, 1315
SsiI	CCGC	8 cut(s)	149, 240, 243, 280, 292, 344, 414, 833
SspDI	GGCGCC	1 cut(s)	1391
SspI	AATATT	2 cut(s)	841, 1647
SspMI	CTAG	2 cut(s)	71, 1688
SstI	GAGCTC	1 cut(s)	312
StyD4I	CCNGG	5 cut(s)	92, 93, 138, 284, 1744
TaaI	ACNGT	3 cut(s)	1351, 1585, 1772
TaiI	ACGT	3 cut(s)	609, 1763, 1825
TaqI	TCGA	7 cut(s)	165, 303, 327, 525, 997, 1141, 1569
TasI	AATT	8 cut(s)	481, 570, 660, 857, 863, 906, 1223, 1315
TatI	WGTACW	1 cut(s)	915
TauI	GCSGC	3 cut(s)	151, 245, 346
TfiI	GAWTC	2 cut(s)	670, 1327
Tru1I	TTAA	3 cut(s)	480, 992, 1175
Tru9I	TTAA	3 cut(s)	480, 992, 1175
TscAI	CASTG	2 cut(s)	1408, 1606
TseFI	GTSAC	4 cut(s)	983, 1526, 1563, 1823
TseI	GCWGC	5 cut(s)	445, 1205, 1208, 1382, 1703
Tsp45I	GTSAC	4 cut(s)	983, 1526, 1563, 1823
TspDTI	ATGAA	9 cut(s)	262, 662, 771, 791, 869, 1274, 1476, 1493, 1623
TspGWI	ACGGA	4 cut(s)	521, 1242, 1312, 1514
TspMI	CCCGGG	1 cut(s)	93
TspRI	CASTG	2 cut(s)	1408, 1606
XapI	RAATTY	2 cut(s)	570, 863
XcmI	CCANNNNNNNNNTGG	1 cut(s)	646
XhoI	CTCGAG	1 cut(s)	1568
XmaI	CCCGGG	1 cut(s)	93
XmnI	GAANNNNTTC	1 cut(s)	1411
XspI	CTAG	2 cut(s)	71, 1688
Zsp2I	ATGCAT	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.