Rh3CG270200

Nucleolar complex protein 4 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
26658673 .. 26662621
3949 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG270200.1

Sequence Viewer

Length: 321 bp
ATGACTGTGACTGAAGGAGGCGGAGCCGCTGGCACTGGGTTCAGATCGGGAACGATTGTGACTGGGTTCAGATCGGGAATGACTGTGACTGGATTCAGATTGGGTTTACAGCTTCTTTTTTCGCTGGAATCTGATGAAACTCCCAAGGAGGTGGTGTTGGATACACTGATGGAGTTTGTGAAGTTGGGAAATGGAGGAAGGTTTCACTTTGCTATATTCCATGGGTTTCTTCGTAACACTGTGTACTCTACAACGTCGCCGTATGTCTTGGTAGACTTACTTGCATCAAAGTATTTCAAGTATATTGATGTCCGACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

11.65

Weight (kDa)

8.09

Isoelectric Point (pI)

17.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 273
AciI CCGC 2 cut(s) 21, 27
AcuI CTGAAG 1 cut(s) 33
AfaI GTAC 1 cut(s) 245
AgsI TTSAA 1 cut(s) 298
AluBI AGCT 1 cut(s) 112
AluI AGCT 1 cut(s) 112
BccI CCATC 1 cut(s) 163
BceAI ACGGC 1 cut(s) 244
BciVI GTATCC 1 cut(s) 154
BfuI GTATCC 1 cut(s) 154
BisI GCNGC 1 cut(s) 27
BlsI GCNGC 1 cut(s) 28
BmiI GGNNCC 1 cut(s) 25
BmrI ACTGGG 2 cut(s) 45, 72
BmsI GCATC 1 cut(s) 293
BmuI ACTGGG 2 cut(s) 45, 72
BsaJI CCNNGG 2 cut(s) 144, 220
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bse1I ACTGG 3 cut(s) 40, 67, 94
BseDI CCNNGG 2 cut(s) 144, 220
BseNI ACTGG 3 cut(s) 40, 67, 94
Bsp143I GATC 2 cut(s) 44, 71
Bsp19I CCATGG 1 cut(s) 220
BspACI CCGC 2 cut(s) 21, 27
BspLI GGNNCC 1 cut(s) 25
BsrI ACTGG 3 cut(s) 40, 67, 94
BssECI CCNNGG 2 cut(s) 144, 220
BssMI GATC 2 cut(s) 44, 71
BssT1I CCWWGG 2 cut(s) 144, 220
Bst4CI ACNGT 3 cut(s) 7, 85, 241
BstC8I GCNNGC 1 cut(s) 31
BstDSI CCRYGG 1 cut(s) 220
BstKTI GATC 2 cut(s) 47, 74
BstMBI GATC 2 cut(s) 44, 71
BstXI CCANNNNNNTGG 1 cut(s) 151
BsuI GTATCC 1 cut(s) 154
BtgI CCRYGG 1 cut(s) 220
BtsIMutI CAGTG 3 cut(s) 33, 164, 237
Cac8I GCNNGC 1 cut(s) 31
Csp6I GTAC 1 cut(s) 244
CviAII CATG 1 cut(s) 221
CviJI RGCY 2 cut(s) 26, 112
CviKI_1 RGCY 2 cut(s) 26, 112
CviQI GTAC 1 cut(s) 244
DpnI GATC 2 cut(s) 46, 73
DpnII GATC 2 cut(s) 44, 71
EciI GGCGGA 1 cut(s) 36
Eco130I CCWWGG 2 cut(s) 144, 220
Eco57I CTGAAG 1 cut(s) 33
EcoT14I CCWWGG 2 cut(s) 144, 220
ErhI CCWWGG 2 cut(s) 144, 220
FaeI CATG 1 cut(s) 224
FaiI YATR 4 cut(s) 215, 222, 264, 303
FatI CATG 1 cut(s) 220
FblI GTMKAC 1 cut(s) 273
Fnu4HI GCNGC 1 cut(s) 27
Fsp4HI GCNGC 1 cut(s) 27
GluI GCNGC 1 cut(s) 27
Hin1II CATG 1 cut(s) 224
HinfI GANTC 2 cut(s) 93, 128
Hpy166II GTNNAC 3 cut(s) 107, 244, 274
Hpy188I TCNGA 5 cut(s) 44, 71, 98, 133, 314
Hpy188III TCNNGA 2 cut(s) 48, 75
Hpy8I GTNNAC 3 cut(s) 107, 244, 274
Hpy99I CGWCG 1 cut(s) 259
HpyAV CCTTC 2 cut(s) 8, 192
HpyCH4III ACNGT 3 cut(s) 7, 85, 241
HpyCH4IV ACGT 1 cut(s) 254
HpyCH4V TGCA 1 cut(s) 284
HpySE526I ACGT 1 cut(s) 254
Hsp92II CATG 1 cut(s) 224
Kzo9I GATC 2 cut(s) 44, 71
LmnI GCTCC 1 cut(s) 23
LpnPI CCDG 5 cut(s) 15, 21, 48, 75, 110
LweI GCATC 1 cut(s) 293
MaeII ACGT 1 cut(s) 254
MaeIII GTNAC 4 cut(s) 7, 58, 85, 233
MalI GATC 2 cut(s) 46, 73
MboI GATC 2 cut(s) 44, 71
MboII GAAGA 1 cut(s) 221
MmeI TCCRAC 1 cut(s) 138
MnlI CCTC 3 cut(s) 11, 142, 188
MspA1I CMGCKG 1 cut(s) 29
NcoI CCATGG 1 cut(s) 220
NdeII GATC 2 cut(s) 44, 71
NlaIII CATG 1 cut(s) 224
NlaIV GGNNCC 1 cut(s) 25
NmuCI GTSAC 3 cut(s) 7, 58, 85
PfeI GAWTC 2 cut(s) 93, 128
PkrI GCNGC 1 cut(s) 28
PspN4I GGNNCC 1 cut(s) 25
RsaI GTAC 1 cut(s) 245
RsaNI GTAC 1 cut(s) 244
SatI GCNGC 1 cut(s) 27
Sau3AI GATC 2 cut(s) 44, 71
SetI ASST 4 cut(s) 114, 153, 203, 257
SfaNI GCATC 1 cut(s) 293
SsiI CCGC 2 cut(s) 21, 27
StyI CCWWGG 2 cut(s) 144, 220
TaaI ACNGT 3 cut(s) 7, 85, 241
TaiI ACGT 1 cut(s) 257
TatI WGTACW 1 cut(s) 243
TauI GCSGC 1 cut(s) 29
TfiI GAWTC 2 cut(s) 93, 128
TscAI CASTG 3 cut(s) 40, 171, 244
TseFI GTSAC 3 cut(s) 7, 58, 85
Tsp45I GTSAC 3 cut(s) 7, 58, 85
TspDTI ATGAA 1 cut(s) 150
TspRI CASTG 3 cut(s) 40, 171, 244
XmiI GTMKAC 1 cut(s) 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.