Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20730 |
| fragaria_vesca | FvH4_3g15060 FvH4_3g15060 |
| malus_domestica | MD05G1227700.v1.1 MD10G1208100.v1.1 MD10G1208200.v1.1 |
| prunus_persica | Prupe.4G134800_v2.0.a1 |
| pyrus_communis | pycom05g20980 pycom05g20990 pycom10g17710 |
| rosa_chinensis | RchiOBHm_Chr5g0024821 RchiOBHm_Chr5g0024861 |
| rosa_laevigata | RLG00000032817 |
| rosa_multiflora | Rmu_co8198802.1_g000001 Rmu_co8370541.1_g000001 Rmu_sc0009744.1_g000006 Rmu_sc0009744.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00054560 |
| rosa_rugosa | Rorug05G0084700.1 |
| rosa_samantha | Rh5AG176500 Rh5AG176600 Rh5BG174200 Rh5CG191200 Rh5CG191300 Rh5CG191500 Rh5DG175800 Rh5DG176000 |
| rosa_wichuraiana | Rw5G016000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 267 |
| AfaI | GTAC | 1 cut(s) | 76 |
| AgsI | TTSAA | 1 cut(s) | 95 |
| ApeKI | GCWGC | 1 cut(s) | 26 |
| AsuHPI | GGTGA | 1 cut(s) | 244 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 101, 134 |
| BbvI | GCAGC | 1 cut(s) | 13 |
| BisI | GCNGC | 2 cut(s) | 27, 268 |
| BlsI | GCNGC | 2 cut(s) | 28, 269 |
| BmrI | ACTGGG | 1 cut(s) | 87 |
| BmsI | GCATC | 1 cut(s) | 193 |
| BmuI | ACTGGG | 1 cut(s) | 87 |
| Bse1I | ACTGG | 1 cut(s) | 82 |
| BseGI | GGATG | 1 cut(s) | 208 |
| BseMII | CTCAG | 1 cut(s) | 132 |
| BseNI | ACTGG | 1 cut(s) | 82 |
| BseXI | GCAGC | 1 cut(s) | 13 |
| BsgI | GTGCAG | 1 cut(s) | 176 |
| BslFI | GGGAC | 1 cut(s) | 251 |
| BsmFI | GGGAC | 1 cut(s) | 251 |
| BsmI | GAATGC | 1 cut(s) | 259 |
| BspACI | CCGC | 1 cut(s) | 267 |
| BspCNI | CTCAG | 1 cut(s) | 133 |
| BsrI | ACTGG | 1 cut(s) | 82 |
| BstDEI | CTNAG | 1 cut(s) | 141 |
| BstF5I | GGATG | 1 cut(s) | 208 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 35, 68 |
| BstV1I | GCAGC | 1 cut(s) | 13 |
| BtsCI | GGATG | 1 cut(s) | 208 |
| CseI | GACGC | 1 cut(s) | 8 |
| Csp6I | GTAC | 1 cut(s) | 75 |
| CviJI | RGCY | 3 cut(s) | 26, 38, 270 |
| CviKI_1 | RGCY | 3 cut(s) | 26, 38, 270 |
| CviQI | GTAC | 1 cut(s) | 75 |
| DdeI | CTNAG | 1 cut(s) | 141 |
| FaiI | YATR | 6 cut(s) | 17, 54, 211, 260, 273, 308 |
| FaqI | GGGAC | 1 cut(s) | 251 |
| Fnu4HI | GCNGC | 2 cut(s) | 27, 268 |
| FokI | GGATG | 1 cut(s) | 215 |
| Fsp4HI | GCNGC | 2 cut(s) | 27, 268 |
| GluI | GCNGC | 2 cut(s) | 27, 268 |
| HgaI | GACGC | 1 cut(s) | 8 |
| HinfI | GANTC | 1 cut(s) | 296 |
| HphI | GGTGA | 1 cut(s) | 244 |
| Hpy166II | GTNNAC | 1 cut(s) | 75 |
| Hpy8I | GTNNAC | 1 cut(s) | 75 |
| HpyCH4V | TGCA | 3 cut(s) | 62, 157, 206 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 35, 68 |
| HpyF3I | CTNAG | 1 cut(s) | 141 |
| LpnPI | CCDG | 2 cut(s) | 8, 63 |
| Lsp1109I | GCAGC | 1 cut(s) | 13 |
| LweI | GCATC | 1 cut(s) | 193 |
| MboII | GAAGA | 1 cut(s) | 205 |
| MluCI | AATT | 1 cut(s) | 184 |
| MlyI | GAGTC | 1 cut(s) | 290 |
| MnlI | CCTC | 4 cut(s) | 60, 193, 214, 228 |
| Mva1269I | GAATGC | 1 cut(s) | 259 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 35, 68 |
| PctI | GAATGC | 1 cut(s) | 259 |
| PkrI | GCNGC | 2 cut(s) | 28, 269 |
| PleI | GAGTC | 1 cut(s) | 290 |
| PpsI | GAGTC | 1 cut(s) | 290 |
| RsaI | GTAC | 1 cut(s) | 76 |
| RsaNI | GTAC | 1 cut(s) | 75 |
| SatI | GCNGC | 2 cut(s) | 27, 268 |
| SchI | GAGTC | 1 cut(s) | 290 |
| SetI | ASST | 2 cut(s) | 133, 137 |
| SfaNI | GCATC | 1 cut(s) | 193 |
| SgeI | CNNG | 9 cut(s) | 23, 35, 84, 90, 125, 160, 253, 261, 293 |
| Sse9I | AATT | 1 cut(s) | 184 |
| SsiI | CCGC | 1 cut(s) | 267 |
| TasI | AATT | 1 cut(s) | 184 |
| TatI | WGTACW | 1 cut(s) | 74 |
| TauI | GCSGC | 1 cut(s) | 270 |
| TseI | GCWGC | 1 cut(s) | 26 |
| TspDTI | ATGAA | 2 cut(s) | 167, 302 |