pycom10g18750

Protein of unknown function (DUF1639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0006362
Physical Location & Seq
Reverse (-)
22029906 .. 22032793
2888 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1122 bp
ATGATGATGAGGTACCTGAGAGTGAGCCCAGATTGCGTTCCTCTGAGCAATGGCAAGAAACCAACCGTGAGAACCATATCCAAAGACGACGGGATTACAGACACCGTGACAACAAACAGTGTAGTCACATCTCTAGAACCCACCAAACCCTTCAGATTCCGATCCCAACCCACGCCTCAAGACCCTACACAATCCCAATTCGGAGCCCGACCCACTTCCCCAGACGGCGAAATCCACCACCAGACCCAGCAGCGGCTGGACAAGAGTCCCAGCCGGACTCCCAGCCCAATCCGCGGCGCCGGCGACGTGCTGCTGCAGTGGGGCCAGAGAAAGAGGTCGAGAGTCTCCAGGACTGAGATCCGAGCTGTCACCGATGAGTCCTCTTCGTCAGCCCAAGCGAGGCAGGCTTCAAAGCTGCAGAGGAGAGACAAGTCCATGCAGCCGCCGCCGCCGCCCCTTCCATCTTCTTCCTCCACGACGTCGTCGTTTTCTAATGGCGGCAGACCGAGAAAGGAAGCCTCCGGGTCGCTTCCTAGCAGGAATTTGGAAGATCGATCTGCCCGCGTTAATAGGTCGCCATCGAGAAACCCTACTGGTGGCAGCAACGGCCGAGCCGCTTCTAGATCTACGGCGGGGAAAAGATCTCCTCCGCCGGAGAAAAATGAGAGAAAGGTGCCAGCTTGCTTGGGCAGGTCATCAGCAGCAGCCAAAGATGACAGCAAGCCAAATGGAGCTCAAGCTGAACGTGTGAATCATGCTGATTCTACTTTGTTGCAATCGGATCAATTAGCCACTGGTTCGCGAGCGGCGGCTAATTCCGCTGCCGCTGCGGCAGCGGAGAAGGTGAACTACGAAGTGGTGGAGTGGCCGAGAATTTATATTGCTCTGTCGAGGAAGGAGAAGGAAGATGATTTCCTTGCAATGAAAGGCACGAAGCTCCCTCAGAGACCCAAAAAAAGAGCCAAAAATGTTGATAGAACTCTGCAGTATTGTTTTCCAGGGATGTGGCTGTCTGACTTGACAAGGAATCGATATGAGGTCAGGGAGAAGAAATGTGTGAAGAAGGTAATATGCTGCTCTTTCCTGCTGTTTTCCTCTTTTGTCTTTTTCCTCAGTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1639

Protein Analysis

374

Amino Acids

41.13

Weight (kDa)

10.41

Isoelectric Point (pI)

56.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1639 PF07797 296 - 345 8.1e-23 Protein of unknown function (DUF1639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 482
Acc36I ACCTGC 1 cut(s) 681
Acc65I GGTACC 1 cut(s) 12
AccB1I GGYRCC 3 cut(s) 12, 296, 673
AccBSI CCGCTC 1 cut(s) 806
AccII CGCG 3 cut(s) 294, 564, 802
AclWI GGATC 3 cut(s) 156, 352, 789
AcoI YGGCCR 2 cut(s) 607, 866
AcsI RAATTY 2 cut(s) 541, 873
AcuI CTGAAG 1 cut(s) 136
AcyI GRCGYC 2 cut(s) 297, 479
AfaI GTAC 1 cut(s) 14
AfiI CCNNNNNNNGG 4 cut(s) 252, 293, 399, 596
AflIII ACRYGT 1 cut(s) 745
AgsI TTSAA 1 cut(s) 411
AjiI CACGTC 1 cut(s) 307
AjnI CCWGG 2 cut(s) 347, 997
AluBI AGCT 6 cut(s) 365, 415, 680, 734, 740, 937
AluI AGCT 6 cut(s) 365, 415, 680, 734, 740, 937
Alw21I GWGCWC 1 cut(s) 736
Alw26I GTCTC 3 cut(s) 349, 420, 940
AlwI GGATC 3 cut(s) 156, 352, 789
AlwNI CAGNNNCTG 1 cut(s) 256
AoxI GGCC 3 cut(s) 322, 607, 866
ApoI RAATTY 2 cut(s) 541, 873
Asp718I GGTACC 1 cut(s) 12
AspLEI GCGC 1 cut(s) 299
AspS9I GGNCC 1 cut(s) 322
AsuC2I CCSGG 1 cut(s) 523
AsuHPI GGTGA 2 cut(s) 361, 856
BanI GGYRCC 3 cut(s) 12, 296, 673
BanII GRGCYC 3 cut(s) 29, 208, 736
BarI GAAGNNNNNNTAC 2 cut(s) 833, 865
Bbv12I GWGCWC 1 cut(s) 736
BccI CCATC 2 cut(s) 469, 586
BceAI ACGGC 3 cut(s) 241, 622, 645
BciT130I CCWGG 2 cut(s) 349, 999
BcnI CCSGG 1 cut(s) 523
BcoDI GTCTC 3 cut(s) 349, 420, 940
BfaI CTAG 3 cut(s) 134, 534, 621
BfmI CTRYAG 3 cut(s) 314, 416, 983
BfoI RGCGCY 1 cut(s) 300
BfuAI ACCTGC 1 cut(s) 681
BglI GCCNNNNNGGC 1 cut(s) 830
BglII AGATCT 2 cut(s) 623, 641
Bme1390I CCNGG 3 cut(s) 349, 523, 999
BmgBI CACGTC 1 cut(s) 307
BmgT120I GGNCC 1 cut(s) 322
BmiI GGNNCC 5 cut(s) 14, 205, 298, 323, 675
BmrFI CCNGG 3 cut(s) 349, 523, 999
BoxI GACNNNNGTC 1 cut(s) 264
BpmI CTGGAG 1 cut(s) 331
BpuEI CTTGAG 2 cut(s) 162, 720
BpuMI CCSGG 1 cut(s) 523
Bsa29I ATCGAT 2 cut(s) 553, 1030
BsaBI GATNNNNATC 1 cut(s) 160
BsaHI GRCGYC 2 cut(s) 297, 479
BsaI GGTCTC 1 cut(s) 940
BsaJI CCNNGG 2 cut(s) 292, 998
Bsc4I CCNNNNNNNGG 4 cut(s) 252, 293, 399, 596
Bse118I RCCGGY 1 cut(s) 299
Bse1I ACTGG 2 cut(s) 598, 799
Bse3DI GCAATG 2 cut(s) 55, 927
Bse8I GATNNNNATC 1 cut(s) 160
BseBI CCWGG 2 cut(s) 349, 999
BseCI ATCGAT 2 cut(s) 553, 1030
BseDI CCNNGG 2 cut(s) 292, 998
BseGI GGATG 1 cut(s) 1008
BseJI GATNNNNATC 1 cut(s) 160
BseLI CCNNNNNNNGG 4 cut(s) 252, 293, 399, 596
BseMI GCAATG 2 cut(s) 55, 927
BseMII CTCAG 4 cut(s) 8, 35, 345, 956
BseNI ACTGG 2 cut(s) 598, 799
BseRI GAGGAG 2 cut(s) 436, 636
BseX3I CGGCCG 1 cut(s) 607
BseYI CCCAGC 3 cut(s) 246, 269, 281
Bsh1236I CGCG 3 cut(s) 294, 564, 802
Bsh1285I CGRYCG 1 cut(s) 610
BshFI GGCC 3 cut(s) 324, 609, 868
BshNI GGYRCC 3 cut(s) 12, 296, 673
BshVI ATCGAT 2 cut(s) 553, 1030
BsiEI CGRYCG 1 cut(s) 610
BsiHKAI GWGCWC 1 cut(s) 736
BsiSI CCGG 4 cut(s) 274, 300, 522, 653
BslFI GGGAC 1 cut(s) 252
BslI CCNNNNNNNGG 4 cut(s) 252, 293, 399, 596
BsmAI GTCTC 3 cut(s) 349, 420, 940
BsmFI GGGAC 1 cut(s) 252
BsnI GGCC 3 cut(s) 324, 609, 868
Bso31I GGTCTC 1 cut(s) 940
Bsp1286I GDGCHC 3 cut(s) 29, 208, 736
Bsp143I GATC 7 cut(s) 161, 357, 550, 554, 623, 641, 781
Bsp68I TCGCGA 1 cut(s) 802
BspANI GGCC 3 cut(s) 324, 609, 868
BspCNI CTCAG 4 cut(s) 9, 36, 346, 955
BspDI ATCGAT 2 cut(s) 553, 1030
BspFNI CGCG 3 cut(s) 294, 564, 802
BspLI GGNNCC 5 cut(s) 14, 205, 298, 323, 675
BspMAI CTGCAG 3 cut(s) 318, 420, 987
BspMI ACCTGC 1 cut(s) 681
BspPI GGATC 3 cut(s) 156, 352, 789
BspT107I GGYRCC 3 cut(s) 12, 296, 673
BspTNI GGTCTC 1 cut(s) 940
BsrBI CCGCTC 1 cut(s) 806
BsrDI GCAATG 2 cut(s) 55, 927
BsrFI RCCGGY 1 cut(s) 299
BsrI ACTGG 2 cut(s) 598, 799
BssAI RCCGGY 1 cut(s) 299
BssECI CCNNGG 2 cut(s) 292, 998
BssMI GATC 7 cut(s) 161, 357, 550, 554, 623, 641, 781
BssNI GRCGYC 2 cut(s) 297, 479
Bst2UI CCWGG 2 cut(s) 349, 999
Bst4CI ACNGT 3 cut(s) 67, 106, 119
Bst6I CTCTTC 1 cut(s) 388
BstACI GRCGYC 2 cut(s) 297, 479
BstC8I GCNNGC 7 cut(s) 301, 405, 562, 678, 682, 722, 804
BstDEI CTNAG 5 cut(s) 17, 44, 354, 942, 1112
BstDSI CCRYGG 1 cut(s) 292
BstF5I GGATG 1 cut(s) 1008
BstFNI CGCG 3 cut(s) 294, 564, 802
BstH2I RGCGCY 1 cut(s) 300
BstHHI GCGC 1 cut(s) 299
BstKTI GATC 7 cut(s) 164, 360, 553, 557, 626, 644, 784
BstMAI GTCTC 3 cut(s) 349, 420, 940
BstMBI GATC 7 cut(s) 161, 357, 550, 554, 623, 641, 781
BstMCI CGRYCG 1 cut(s) 610
BstNI CCWGG 2 cut(s) 349, 999
BstPAI GACNNNNGTC 1 cut(s) 264
BstSCI CCNGG 3 cut(s) 347, 521, 997
BstSFI CTRYAG 3 cut(s) 314, 416, 983
BstUI CGCG 3 cut(s) 294, 564, 802
BstX2I RGATCY 3 cut(s) 357, 623, 641
BstXI CCANNNNNNTGG 1 cut(s) 1005
BstYI RGATCY 3 cut(s) 357, 623, 641
BstZI CGGCCG 1 cut(s) 607
Bsu15I ATCGAT 2 cut(s) 553, 1030
BsuRI GGCC 3 cut(s) 324, 609, 868
BsuTUI ATCGAT 2 cut(s) 553, 1030
BtgI CCRYGG 1 cut(s) 292
BtrI CACGTC 1 cut(s) 307
BtsCI GGATG 1 cut(s) 1008
BtsI GCAGTG 1 cut(s) 323
BtsIMutI CAGTG 3 cut(s) 124, 323, 792
BtuMI TCGCGA 1 cut(s) 802
BveI ACCTGC 1 cut(s) 681
Cac8I GCNNGC 7 cut(s) 301, 405, 562, 678, 682, 722, 804
CaiI CAGNNNCTG 1 cut(s) 256
CfoI GCGC 1 cut(s) 299
Cfr10I RCCGGY 1 cut(s) 299
Cfr13I GGNCC 1 cut(s) 322
Cfr42I CCGCGG 1 cut(s) 295
ClaI ATCGAT 2 cut(s) 553, 1030
Csp6I GTAC 1 cut(s) 13
CviAII CATG 2 cut(s) 436, 755
CviQI GTAC 1 cut(s) 13
DdeI CTNAG 5 cut(s) 17, 44, 354, 942, 1112
DinI GGCGCC 1 cut(s) 298
DpnI GATC 7 cut(s) 163, 359, 552, 556, 625, 643, 783
DpnII GATC 7 cut(s) 161, 357, 550, 554, 623, 641, 781
EaeI YGGCCR 2 cut(s) 607, 866
EagI CGGCCG 1 cut(s) 607
Eam1104I CTCTTC 1 cut(s) 388
EarI CTCTTC 1 cut(s) 388
EciI GGCGGA 1 cut(s) 639
Ecl136II GAGCTC 1 cut(s) 734
EclXI CGGCCG 1 cut(s) 607
Eco24I GRGCYC 3 cut(s) 29, 208, 736
Eco31I GGTCTC 1 cut(s) 940
Eco52I CGGCCG 1 cut(s) 607
Eco53kI GAGCTC 1 cut(s) 734
Eco57I CTGAAG 1 cut(s) 136
EcoICRI GAGCTC 1 cut(s) 734
EcoRII CCWGG 2 cut(s) 347, 997
EcoT38I GRGCYC 3 cut(s) 29, 208, 736
EgeI GGCGCC 1 cut(s) 298
EheI GGCGCC 1 cut(s) 298
FaeI CATG 2 cut(s) 439, 758
FaiI YATR 6 cut(s) 77, 437, 756, 879, 1035, 1072
FaqI GGGAC 1 cut(s) 252
FatI CATG 2 cut(s) 435, 754
FauI CCCGC 2 cut(s) 569, 625
FokI GGATG 1 cut(s) 1015
FriOI GRGCYC 3 cut(s) 29, 208, 736
FspBI CTAG 3 cut(s) 134, 534, 621
GlaI GCGC 1 cut(s) 298
GsaI CCCAGC 3 cut(s) 250, 273, 285
GsuI CTGGAG 1 cut(s) 331
HaeII RGCGCY 1 cut(s) 300
HaeIII GGCC 3 cut(s) 324, 609, 868
HapII CCGG 4 cut(s) 274, 300, 522, 653
HhaI GCGC 1 cut(s) 299
Hin1I GRCGYC 2 cut(s) 297, 479
Hin1II CATG 2 cut(s) 439, 758
Hin6I GCGC 1 cut(s) 297
HinP1I GCGC 1 cut(s) 297
HinfI GANTC 8 cut(s) 156, 265, 277, 342, 377, 751, 761, 1027
HpaII CCGG 4 cut(s) 274, 300, 522, 653
HphI GGTGA 2 cut(s) 361, 856
Hpy166II GTNNAC 1 cut(s) 847
Hpy188I TCNGA 8 cut(s) 45, 155, 161, 203, 362, 781, 945, 1015
Hpy188III TCNNGA 6 cut(s) 134, 179, 339, 582, 621, 801
Hpy8I GTNNAC 1 cut(s) 847
Hpy99I CGWCG 5 cut(s) 92, 308, 481, 484, 487
HpyAV CCTTC 6 cut(s) 160, 467, 835, 889, 895, 1057
HpyCH4III ACNGT 3 cut(s) 67, 106, 119
HpyCH4IV ACGT 3 cut(s) 306, 479, 745
HpyCH4V TGCA 6 cut(s) 316, 418, 439, 775, 920, 985
HpyF3I CTNAG 5 cut(s) 17, 44, 354, 942, 1112
HpySE526I ACGT 3 cut(s) 306, 479, 745
Hsp92I GRCGYC 2 cut(s) 297, 479
Hsp92II CATG 2 cut(s) 439, 758
HspAI GCGC 1 cut(s) 297
KasI GGCGCC 1 cut(s) 296
KpnI GGTACC 1 cut(s) 16
KroI GCCGGC 1 cut(s) 299
KroNI GCCGGC 1 cut(s) 301
KspI CCGCGG 1 cut(s) 295
Kzo9I GATC 7 cut(s) 161, 357, 550, 554, 623, 641, 781
LmnI GCTCC 3 cut(s) 203, 731, 942
MaeI CTAG 3 cut(s) 134, 534, 621
MaeII ACGT 3 cut(s) 306, 479, 745
MaeIII GTNAC 3 cut(s) 106, 124, 367
MalI GATC 7 cut(s) 163, 359, 552, 556, 625, 643, 783
MbiI CCGCTC 1 cut(s) 806
MboI GATC 7 cut(s) 161, 357, 550, 554, 623, 641, 781
MboII GAAGA 7 cut(s) 375, 456, 459, 560, 917, 1060, 1072
MflI RGATCY 3 cut(s) 357, 623, 641
MhlI GDGCHC 3 cut(s) 29, 208, 736
MluCI AATT 5 cut(s) 197, 541, 785, 814, 873
Mly113I GGCGCC 1 cut(s) 297
MlyI GAGTC 4 cut(s) 271, 274, 351, 386
MreI CGCCGGCG 1 cut(s) 299
MroNI GCCGGC 1 cut(s) 299
MseI TTAA 2 cut(s) 567, 1120
MspA1I CMGCKG 5 cut(s) 253, 294, 821, 827, 836
MspI CCGG 4 cut(s) 274, 300, 522, 653
MspR9I CCNGG 3 cut(s) 349, 523, 999
MvaI CCWGG 2 cut(s) 349, 999
MvnI CGCG 3 cut(s) 294, 564, 802
NaeI GCCGGC 1 cut(s) 301
NarI GGCGCC 1 cut(s) 297
NciI CCSGG 1 cut(s) 523
NdeII GATC 7 cut(s) 161, 357, 550, 554, 623, 641, 781
NgoMIV GCCGGC 1 cut(s) 299
NlaIII CATG 2 cut(s) 439, 758
NlaIV GGNNCC 5 cut(s) 14, 205, 298, 323, 675
NmeAIII GCCGAG 2 cut(s) 635, 894
NmuCI GTSAC 3 cut(s) 106, 124, 367
NruI TCGCGA 1 cut(s) 802
PcsI WCGNNNNNNNCGW 1 cut(s) 482
PdiI GCCGGC 1 cut(s) 301
PfeI GAWTC 4 cut(s) 156, 751, 761, 1027
PflFI GACNNNGTC 1 cut(s) 481
PfoI TCCNGGA 1 cut(s) 347
PleI GAGTC 4 cut(s) 271, 273, 350, 385
PluTI GGCGCC 1 cut(s) 300
PpsI GAGTC 4 cut(s) 271, 273, 350, 385
PshAI GACNNNNGTC 1 cut(s) 264
Psp124BI GAGCTC 1 cut(s) 736
Psp6I CCWGG 2 cut(s) 347, 997
PspFI CCCAGC 3 cut(s) 246, 269, 281
PspGI CCWGG 2 cut(s) 347, 997
PspN4I GGNNCC 5 cut(s) 14, 205, 298, 323, 675
PspPI GGNCC 1 cut(s) 322
PstI CTGCAG 3 cut(s) 318, 420, 987
PstNI CAGNNNCTG 1 cut(s) 256
PsuI RGATCY 3 cut(s) 357, 623, 641
PsyI GACNNNGTC 1 cut(s) 481
RruI TCGCGA 1 cut(s) 802
RsaI GTAC 1 cut(s) 14
RsaNI GTAC 1 cut(s) 13
SacI GAGCTC 1 cut(s) 736
SacII CCGCGG 1 cut(s) 295
SaqAI TTAA 2 cut(s) 567, 1120
Sau3AI GATC 7 cut(s) 161, 357, 550, 554, 623, 641, 781
Sau96I GGNCC 1 cut(s) 322
SchI GAGTC 4 cut(s) 271, 274, 351, 386
ScrFI CCNGG 3 cut(s) 349, 523, 999
SduI GDGCHC 3 cut(s) 29, 208, 736
SfcI CTRYAG 3 cut(s) 314, 416, 983
SfoI GGCGCC 1 cut(s) 298
Sfr303I CCGCGG 1 cut(s) 295
SgrAI CRCCGGYG 1 cut(s) 299
SgrBI CCGCGG 1 cut(s) 295
SmlI CTYRAG 2 cut(s) 177, 735
SmoI CTYRAG 2 cut(s) 177, 735
Sse9I AATT 5 cut(s) 197, 541, 785, 814, 873
SspDI GGCGCC 1 cut(s) 296
SspMI CTAG 3 cut(s) 134, 534, 621
SstI GAGCTC 1 cut(s) 736
StyD4I CCNGG 3 cut(s) 347, 521, 997
TaaI ACNGT 3 cut(s) 67, 106, 119
TaiI ACGT 3 cut(s) 309, 482, 748
TaqI TCGA 5 cut(s) 338, 553, 581, 890, 1030
TaqII GACCGA 1 cut(s) 520
TasI AATT 5 cut(s) 197, 541, 785, 814, 873
TfiI GAWTC 4 cut(s) 156, 751, 761, 1027
Tru1I TTAA 2 cut(s) 567, 1120
Tru9I TTAA 2 cut(s) 567, 1120
TscAI CASTG 3 cut(s) 124, 323, 799
TseFI GTSAC 3 cut(s) 106, 124, 367
Tsp45I GTSAC 3 cut(s) 106, 124, 367
TspDTI ATGAA 1 cut(s) 938
TspRI CASTG 3 cut(s) 124, 323, 799
Tth111I GACNNNGTC 1 cut(s) 481
XapI RAATTY 2 cut(s) 541, 873
XbaI TCTAGA 2 cut(s) 133, 620
XspI CTAG 3 cut(s) 134, 534, 621
ZraI GACGTC 1 cut(s) 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.