pycom11g06200

pfkB family carbohydrate kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
4777012 .. 4779029
2018 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1155 bp
ATGGGCCGAGACGGAAATCGACCCAATTCAGCTCCCCGGGTCCTAATCGCCGGCAACTACTGCCACGACGTTTTAATCAAAGACGGCGTCGTTTTGGCTGAGACTCTCGGCGGGGCCGCTTCCTTCATCTCCAATGTATTCGATGGAGTATCCGTTCCCTACGATTTGGTCTCCAAAGTCGGGTCGGACTTTGCTTACTCTGTCCCGCGTGACCCGATTGTCGTACCCGATTGCAAAACCACTCTCTTCCACGCGCATTTTGATTCCGGCGTCGGCGGTGACGAACGCCAGGACCGGGTTCTGCAACGGGTAAGAGCTTGCGGCCCGATTAGGCCCTCGGATCTCCCCGAATCGAGGTTTGATTTCGGAATGGCGGTCGGGGTCGGCGGCGAGATCACCGTTGAGACGGTGGAGAAGTTGGTTGAGACTTGCAACACTGTGTTCGTGGACATTCAGGCTCTGATTCGAGCTTTCGACGGAGTCGACGGGACTGTGAAGCTTGTGGGTTTGAAGGAGAGTGGATTCTTCCATCTCTTGCCTCGAATTGGGTTTTTGAAGGCGTCGGCGGAGGAGGCATTGCTTATGGAGGTGGAGGAGGTGAGGAAGCTCTGCTGTGTTGTGGTGACGAATGGGAGGCGTGGGTGTAAAGTTTATTGGAGAGACGGTGAGGTGGAAGTTGCGCCTTTTCCGACGAGCCAGGTTGATCCGACGGGCGCAGGAGACAGTTTCCTTGGTGGGTTTGTTGCCGGGCTTGTTAATGGCTTGACTATGCCTGATGCTGCATTGCTCGGCAACCTTTTCGGGTCACTGACTGTTGGGCAAATAGGATTGCCCAAGTTTGATTCCAAGTTGTTGCAGAGAGTTCGTGAAGAGGTGCAGAGGAGAAAAATGCAGTGCGCTAATTGCCACGAAAGAAAAGATGACAGGTTTAAGTTTGTGAAGATAGCGGGACATGCGCAATTTCATGCAGCCCTAGGAGCAGCTAAGCAGACAACAAAGGGCCTTGCTCAGGAACCTCAACGGGATCTGCCAAGTTCTCCTCCCAAGTCAATGGAACAGGGTGTCCTCCCTCAATACGCGACACAGCCTAAATTGTTGCCCGTCTCTGTCAATGAAGAACCAGTTCAAATCATTGACACTGCCGGTAAGCCATGA

Protein Analysis

385

Amino Acids

41.46

Weight (kDa)

6.03

Isoelectric Point (pI)

33.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PfkB PF00294 205 - 276 4.8e-19 pfkB family carbohydrate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 218
Acc16I TGCGCA 1 cut(s) 957
AccI GTMKAC 1 cut(s) 483
AccII CGCG 3 cut(s) 208, 254, 1079
AciI CCGC 9 cut(s) 111, 117, 206, 276, 321, 374, 387, 566, 947
AclWI GGATC 3 cut(s) 348, 698, 1032
AcyI GRCGYC 3 cut(s) 87, 270, 560
AfaI GTAC 1 cut(s) 225
AfiI CCNNNNNNNGG 5 cut(s) 180, 295, 354, 545, 1009
AgsI TTSAA 3 cut(s) 511, 556, 1127
AjnI CCWGG 2 cut(s) 288, 696
AloI GAACNNNNNNTCC 4 cut(s) 138, 170, 1047, 1079
AluBI AGCT 6 cut(s) 32, 317, 470, 499, 607, 983
AluI AGCT 6 cut(s) 32, 317, 470, 499, 607, 983
Alw26I GTCTC 8 cut(s) 3, 95, 175, 398, 419, 654, 714, 1108
AlwI GGATC 3 cut(s) 348, 698, 1032
AlwNI CAGNNNCTG 1 cut(s) 460
Ama87I CYCGRG 1 cut(s) 36
AoxI GGCC 5 cut(s) 4, 114, 322, 332, 1000
ApeKI GCWGC 3 cut(s) 779, 968, 980
ArsI GACNNNNNNTTYG 2 cut(s) 72, 104
Asp700I GAANNNNTTC 1 cut(s) 1122
AspA2I CCTAGG 1 cut(s) 973
AspLEI GCGC 5 cut(s) 256, 682, 716, 899, 958
AspS9I GGNCC 7 cut(s) 4, 40, 114, 292, 323, 333, 1000
AsuC2I CCSGG 4 cut(s) 37, 38, 296, 748
AsuHPI GGTGA 5 cut(s) 290, 388, 610, 634, 677
AvaI CYCGRG 1 cut(s) 36
AvaII GGWCC 2 cut(s) 40, 292
AvrII CCTAGG 1 cut(s) 973
BbvI GCAGC 3 cut(s) 766, 980, 992
BccI CCATC 2 cut(s) 137, 537
BceAI ACGGC 1 cut(s) 100
BcgI CGANNNNNNTGC 4 cut(s) 781, 815, 845, 879
BciT130I CCWGG 2 cut(s) 290, 698
BciVI GTATCC 1 cut(s) 160
BcnI CCSGG 4 cut(s) 37, 38, 296, 748
BcoDI GTCTC 8 cut(s) 3, 95, 175, 398, 419, 654, 714, 1108
BfaI CTAG 1 cut(s) 974
BfuI GTATCC 1 cut(s) 160
BisI GCNGC 6 cut(s) 117, 322, 388, 780, 969, 981
BlnI CCTAGG 1 cut(s) 973
BlpI GCTNAGC 1 cut(s) 984
BlsI GCNGC 6 cut(s) 118, 323, 389, 781, 970, 982
Bme1390I CCNGG 6 cut(s) 37, 38, 290, 296, 698, 748
Bme18I GGWCC 2 cut(s) 40, 292
BmeT110I CYCGRG 1 cut(s) 36
BmgT120I GGNCC 7 cut(s) 4, 40, 114, 292, 323, 333, 1000
BmiI GGNNCC 3 cut(s) 41, 115, 1014
BmrFI CCNGG 6 cut(s) 37, 38, 290, 296, 698, 748
BmsI GCATC 1 cut(s) 766
Bpu10I CCTNAGC 1 cut(s) 1008
Bpu1102I GCTNAGC 1 cut(s) 984
BpuMI CCSGG 4 cut(s) 37, 38, 296, 748
BsaHI GRCGYC 3 cut(s) 87, 270, 560
BsaI GGTCTC 1 cut(s) 175
BsaJI CCNNGG 5 cut(s) 35, 36, 336, 730, 973
BsaXI ACNNNNNCTCC 4 cut(s) 138, 168, 649, 679
Bsc4I CCNNNNNNNGG 5 cut(s) 180, 295, 354, 545, 1009
Bse118I RCCGGY 2 cut(s) 50, 1142
Bse1I ACTGG 1 cut(s) 1121
Bse3DI GCAATG 2 cut(s) 575, 782
BseBI CCWGG 2 cut(s) 290, 698
BseDI CCNNGG 5 cut(s) 35, 36, 336, 730, 973
BseLI CCNNNNNNNGG 5 cut(s) 180, 295, 354, 545, 1009
BseMI GCAATG 2 cut(s) 575, 782
BseMII CTCAG 2 cut(s) 90, 1022
BseNI ACTGG 1 cut(s) 1121
BseRI GAGGAG 4 cut(s) 584, 608, 895, 1029
BseXI GCAGC 3 cut(s) 766, 980, 992
BsgI GTGCAG 1 cut(s) 896
Bsh1236I CGCG 3 cut(s) 208, 254, 1079
Bsh1285I CGRYCG 1 cut(s) 378
BshFI GGCC 5 cut(s) 6, 116, 324, 334, 1002
BsiEI CGRYCG 1 cut(s) 378
BsiHKCI CYCGRG 1 cut(s) 36
BsiSI CCGG 6 cut(s) 37, 51, 267, 295, 747, 1143
BslFI GGGAC 3 cut(s) 188, 502, 963
BslI CCNNNNNNNGG 5 cut(s) 180, 295, 354, 545, 1009
BsmAI GTCTC 8 cut(s) 3, 95, 175, 398, 419, 654, 714, 1108
BsmBI CGTCTC 4 cut(s) 3, 398, 654, 1108
BsmFI GGGAC 3 cut(s) 188, 502, 963
BsnI GGCC 5 cut(s) 6, 116, 324, 334, 1002
Bso31I GGTCTC 1 cut(s) 175
BsoBI CYCGRG 1 cut(s) 36
Bsp143I GATC 4 cut(s) 340, 393, 703, 1024
Bsp1720I GCTNAGC 1 cut(s) 984
BspACI CCGC 9 cut(s) 111, 117, 206, 276, 321, 374, 387, 566, 947
BspANI GGCC 5 cut(s) 6, 116, 324, 334, 1002
BspCNI CTCAG 2 cut(s) 91, 1021
BspFNI CGCG 3 cut(s) 208, 254, 1079
BspLI GGNNCC 3 cut(s) 41, 115, 1014
BspPI GGATC 3 cut(s) 348, 698, 1032
BspTNI GGTCTC 1 cut(s) 175
BsrDI GCAATG 2 cut(s) 575, 782
BsrFI RCCGGY 2 cut(s) 50, 1142
BsrI ACTGG 1 cut(s) 1121
BssAI RCCGGY 2 cut(s) 50, 1142
BssECI CCNNGG 5 cut(s) 35, 36, 336, 730, 973
BssMI GATC 4 cut(s) 340, 393, 703, 1024
BssNI GRCGYC 3 cut(s) 87, 270, 560
BssT1I CCWWGG 2 cut(s) 730, 973
Bst2UI CCWGG 2 cut(s) 290, 698
Bst4CI ACNGT 7 cut(s) 400, 409, 439, 493, 665, 725, 814
Bst6I CTCTTC 2 cut(s) 251, 864
BstACI GRCGYC 3 cut(s) 87, 270, 560
BstAPI GCANNNNNTGC 1 cut(s) 60
BstC8I GCNNGC 2 cut(s) 52, 319
BstDEI CTNAG 3 cut(s) 99, 984, 1008
BstENI CCTNNNNNAGG 1 cut(s) 1007
BstFNI CGCG 3 cut(s) 208, 254, 1079
BstHHI GCGC 5 cut(s) 256, 682, 716, 899, 958
BstKTI GATC 4 cut(s) 343, 396, 706, 1027
BstMAI GTCTC 8 cut(s) 3, 95, 175, 398, 419, 654, 714, 1108
BstMBI GATC 4 cut(s) 340, 393, 703, 1024
BstMCI CGRYCG 1 cut(s) 378
BstMWI GCNNNNNNNGC 5 cut(s) 60, 572, 903, 953, 977
BstNI CCWGG 2 cut(s) 290, 698
BstNSI RCATGY 1 cut(s) 956
BstSCI CCNGG 6 cut(s) 35, 36, 288, 294, 696, 746
BstUI CGCG 3 cut(s) 208, 254, 1079
BstV1I GCAGC 3 cut(s) 766, 980, 992
BstX2I RGATCY 2 cut(s) 340, 1024
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 2 cut(s) 340, 1024
BsuI GTATCC 1 cut(s) 160
BsuRI GGCC 5 cut(s) 6, 116, 324, 334, 1002
BtsI GCAGTG 2 cut(s) 899, 1137
BtsIMutI CAGTG 4 cut(s) 435, 806, 899, 1137
Cac8I GCNNGC 2 cut(s) 52, 319
CaiI CAGNNNCTG 1 cut(s) 460
CfoI GCGC 5 cut(s) 256, 682, 716, 899, 958
Cfr10I RCCGGY 2 cut(s) 50, 1142
Cfr13I GGNCC 7 cut(s) 4, 40, 114, 292, 323, 333, 1000
Cfr9I CCCGGG 1 cut(s) 36
CseI GACGC 3 cut(s) 76, 259, 549
Csp6I GTAC 1 cut(s) 224
CviAII CATG 3 cut(s) 953, 965, 1152
CviQI GTAC 1 cut(s) 224
DdeI CTNAG 3 cut(s) 99, 984, 1008
DpnI GATC 4 cut(s) 342, 395, 705, 1026
DpnII GATC 4 cut(s) 340, 393, 703, 1024
DrdI GACNNNNNNGTC 1 cut(s) 218
DseDI GACNNNNNNGTC 1 cut(s) 218
Eam1104I CTCTTC 2 cut(s) 251, 864
EarI CTCTTC 2 cut(s) 251, 864
EciI GGCGGA 1 cut(s) 581
Eco130I CCWWGG 2 cut(s) 730, 973
Eco31I GGTCTC 1 cut(s) 175
Eco47I GGWCC 2 cut(s) 40, 292
Eco88I CYCGRG 1 cut(s) 36
EcoNI CCTNNNNNAGG 1 cut(s) 1007
EcoO109I RGGNCCY 3 cut(s) 40, 333, 1000
EcoRII CCWGG 2 cut(s) 288, 696
EcoT14I CCWWGG 2 cut(s) 730, 973
ErhI CCWWGG 2 cut(s) 730, 973
Esp3I CGTCTC 4 cut(s) 3, 398, 654, 1108
FaeI CATG 3 cut(s) 956, 968, 1155
FaiI YATR 5 cut(s) 584, 770, 954, 966, 1153
FaqI GGGAC 3 cut(s) 188, 502, 963
FatI CATG 3 cut(s) 952, 964, 1151
FauI CCCGC 3 cut(s) 104, 213, 940
FblI GTMKAC 1 cut(s) 483
Fnu4HI GCNGC 6 cut(s) 117, 322, 388, 780, 969, 981
Fsp4HI GCNGC 6 cut(s) 117, 322, 388, 780, 969, 981
FspBI CTAG 1 cut(s) 974
FspI TGCGCA 1 cut(s) 957
GlaI GCGC 5 cut(s) 255, 681, 715, 898, 957
GluI GCNGC 6 cut(s) 117, 322, 388, 780, 969, 981
HaeIII GGCC 5 cut(s) 6, 116, 324, 334, 1002
HapII CCGG 6 cut(s) 37, 51, 267, 295, 747, 1143
HgaI GACGC 3 cut(s) 76, 259, 549
HhaI GCGC 5 cut(s) 256, 682, 716, 899, 958
Hin1I GRCGYC 3 cut(s) 87, 270, 560
Hin1II CATG 3 cut(s) 956, 968, 1155
Hin6I GCGC 5 cut(s) 254, 680, 714, 897, 956
HinP1I GCGC 5 cut(s) 254, 680, 714, 897, 956
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HindIII AAGCTT 1 cut(s) 497
HinfI GANTC 7 cut(s) 103, 263, 350, 463, 480, 522, 842
HpaII CCGG 6 cut(s) 37, 51, 267, 295, 747, 1143
HphI GGTGA 5 cut(s) 290, 388, 610, 634, 677
Hpy166II GTNNAC 2 cut(s) 448, 484
Hpy188I TCNGA 6 cut(s) 187, 340, 368, 462, 690, 708
Hpy188III TCNNGA 2 cut(s) 866, 1010
Hpy8I GTNNAC 2 cut(s) 448, 484
Hpy99I CGWCG 8 cut(s) 71, 92, 275, 479, 488, 565, 694, 712
HpyAV CCTTC 3 cut(s) 133, 505, 550
HpyCH4III ACNGT 7 cut(s) 400, 409, 439, 493, 665, 725, 814
HpyCH4IV ACGT 1 cut(s) 69
HpyCH4V TGCA 8 cut(s) 234, 304, 432, 782, 856, 877, 892, 968
HpyF10VI GCNNNNNNNGC 5 cut(s) 60, 572, 903, 953, 977
HpyF3I CTNAG 3 cut(s) 99, 984, 1008
HpySE526I ACGT 1 cut(s) 69
Hsp92I GRCGYC 3 cut(s) 87, 270, 560
Hsp92II CATG 3 cut(s) 956, 968, 1155
HspAI GCGC 5 cut(s) 254, 680, 714, 897, 956
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
Kzo9I GATC 4 cut(s) 340, 393, 703, 1024
LmnI GCTCC 2 cut(s) 37, 977
Lsp1109I GCAGC 3 cut(s) 766, 980, 992
LweI GCATC 1 cut(s) 766
MaeI CTAG 1 cut(s) 974
MaeII ACGT 1 cut(s) 69
MaeIII GTNAC 4 cut(s) 209, 278, 622, 804
MalI GATC 4 cut(s) 342, 395, 705, 1026
MboI GATC 4 cut(s) 340, 393, 703, 1024
MboII GAAGA 5 cut(s) 238, 517, 881, 952, 1127
MflI RGATCY 2 cut(s) 340, 1024
MluCI AATT 5 cut(s) 25, 543, 901, 959, 1091
MlyI GAGTC 2 cut(s) 97, 489
MmeI TCCRAC 3 cut(s) 165, 713, 731
MroNI GCCGGC 1 cut(s) 50
MroXI GAANNNNTTC 1 cut(s) 1122
MseI TTAA 3 cut(s) 74, 756, 930
MspI CCGG 6 cut(s) 37, 51, 267, 295, 747, 1143
MspR9I CCNGG 6 cut(s) 37, 38, 290, 296, 698, 748
MvaI CCWGG 2 cut(s) 290, 698
MvnI CGCG 3 cut(s) 208, 254, 1079
MwoI GCNNNNNNNGC 5 cut(s) 60, 572, 903, 953, 977
NaeI GCCGGC 1 cut(s) 52
NciI CCSGG 4 cut(s) 37, 38, 296, 748
NdeII GATC 4 cut(s) 340, 393, 703, 1024
NgoMIV GCCGGC 1 cut(s) 50
NlaIII CATG 3 cut(s) 956, 968, 1155
NlaIV GGNNCC 3 cut(s) 41, 115, 1014
NmeAIII GCCGAG 3 cut(s) 32, 87, 768
NmuCI GTSAC 4 cut(s) 209, 278, 622, 804
NsbI TGCGCA 1 cut(s) 957
NspI RCATGY 1 cut(s) 956
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 480
PdiI GCCGGC 1 cut(s) 52
PdmI GAANNNNTTC 1 cut(s) 1122
PfeI GAWTC 5 cut(s) 263, 350, 463, 522, 842
PflFI GACNNNGTC 2 cut(s) 86, 479
PkrI GCNGC 6 cut(s) 118, 323, 389, 781, 970, 982
PleI GAGTC 2 cut(s) 97, 488
PpsI GAGTC 2 cut(s) 97, 488
PpuMI RGGWCCY 1 cut(s) 40
Psp5II RGGWCCY 1 cut(s) 40
Psp6I CCWGG 2 cut(s) 288, 696
PspGI CCWGG 2 cut(s) 288, 696
PspN4I GGNNCC 3 cut(s) 41, 115, 1014
PspPI GGNCC 7 cut(s) 4, 40, 114, 292, 323, 333, 1000
PspPPI RGGWCCY 1 cut(s) 40
PstNI CAGNNNCTG 1 cut(s) 460
PsuI RGATCY 2 cut(s) 340, 1024
PsyI GACNNNGTC 2 cut(s) 86, 479
RsaI GTAC 1 cut(s) 225
RsaNI GTAC 1 cut(s) 224
SalI GTCGAC 1 cut(s) 482
SaqAI TTAA 3 cut(s) 74, 756, 930
SatI GCNGC 6 cut(s) 117, 322, 388, 780, 969, 981
Sau3AI GATC 4 cut(s) 340, 393, 703, 1024
Sau96I GGNCC 7 cut(s) 4, 40, 114, 292, 323, 333, 1000
SchI GAGTC 2 cut(s) 97, 489
ScrFI CCNGG 6 cut(s) 37, 38, 290, 296, 698, 748
SfaNI GCATC 1 cut(s) 766
SinI GGWCC 2 cut(s) 40, 292
SmaI CCCGGG 1 cut(s) 38
Sse9I AATT 5 cut(s) 25, 543, 901, 959, 1091
SsiI CCGC 9 cut(s) 111, 117, 206, 276, 321, 374, 387, 566, 947
SspMI CTAG 1 cut(s) 974
StyD4I CCNGG 6 cut(s) 35, 36, 288, 294, 696, 746
StyI CCWWGG 2 cut(s) 730, 973
TaaI ACNGT 7 cut(s) 400, 409, 439, 493, 665, 725, 814
TaiI ACGT 1 cut(s) 72
TaqI TCGA 7 cut(s) 19, 141, 353, 466, 474, 483, 541
TasI AATT 5 cut(s) 25, 543, 901, 959, 1091
TauI GCSGC 3 cut(s) 119, 324, 390
TfiI GAWTC 5 cut(s) 263, 350, 463, 522, 842
Tru1I TTAA 3 cut(s) 74, 756, 930
Tru9I TTAA 3 cut(s) 74, 756, 930
TscAI CASTG 4 cut(s) 442, 813, 899, 1144
TseFI GTSAC 4 cut(s) 209, 278, 622, 804
TseI GCWGC 3 cut(s) 779, 968, 980
Tsp45I GTSAC 4 cut(s) 209, 278, 622, 804
TspDTI ATGAA 3 cut(s) 115, 953, 1128
TspGWI ACGGA 3 cut(s) 27, 142, 492
TspMI CCCGGG 1 cut(s) 36
TspRI CASTG 4 cut(s) 442, 813, 899, 1144
Tth111I GACNNNGTC 2 cut(s) 86, 479
VpaK11BI GGWCC 2 cut(s) 40, 292
XagI CCTNNNNNAGG 1 cut(s) 1007
XceI RCATGY 1 cut(s) 956
XmaI CCCGGG 1 cut(s) 36
XmaJI CCTAGG 1 cut(s) 973
XmiI GTMKAC 1 cut(s) 483
XmnI GAANNNNTTC 1 cut(s) 1122
XspI CTAG 1 cut(s) 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.