hAT family C-terminal dimerisation region
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g15281 FvH4_6g23002 |
| prunus_persica | Prupe.7G011700_v2.0.a1 Prupe.8G060700_v2.0.a1 |
| pyrus_communis | pycom11g23400 pycom11g23410 |
| rosa_chinensis | RchiOBHm_Chr3g0493121 RchiOBHm_Chr4g0416701 RchiOBHm_Chr5g0030191 RchiOBHm_Chr5g0030261 RchiOBHm_Chr5g0030451 RchiOBHm_Chr5g0030531 |
| rosa_laevigata | RLG00000004075 RLG00000009332 RLG00000033223 |
| rosa_roxburghii | Rroxscaffold_1G00012180 Rroxscaffold_3G00221970 Rroxscaffold_5G00352040 Rroxscaffold_5G00352700 Rroxscaffold_5G00366920 Rroxscaffold_6G00401320 Rroxscaffold_7G00214040 |
| rosa_rugosa | Rorug05G0118200 Rorug05G0244100 Rorug05G0431600 |
| rosa_samantha | Rh2AG303900 Rh5BG493400 Rh5CG358400 Rh5CG517400 Rh5DG213900 Rh6BG199100 Rh7DG307600 |
| rosa_wichuraiana | Rw5G019230 Rw6G002650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 143 |
| AfaI | GTAC | 1 cut(s) | 51 |
| AgsI | TTSAA | 1 cut(s) | 26 |
| AluBI | AGCT | 3 cut(s) | 101, 153, 189 |
| AluI | AGCT | 3 cut(s) | 101, 153, 189 |
| ApoI | RAATTY | 1 cut(s) | 143 |
| BanII | GRGCYC | 1 cut(s) | 59 |
| BfaI | CTAG | 1 cut(s) | 174 |
| Bse1I | ACTGG | 1 cut(s) | 144 |
| BseNI | ACTGG | 1 cut(s) | 144 |
| Bsp1286I | GDGCHC | 1 cut(s) | 59 |
| BsrI | ACTGG | 1 cut(s) | 144 |
| Csp6I | GTAC | 1 cut(s) | 50 |
| CviAII | CATG | 1 cut(s) | 166 |
| CviJI | RGCY | 4 cut(s) | 57, 101, 153, 189 |
| CviKI_1 | RGCY | 4 cut(s) | 57, 101, 153, 189 |
| CviQI | GTAC | 1 cut(s) | 50 |
| Eco24I | GRGCYC | 1 cut(s) | 59 |
| EcoRI | GAATTC | 1 cut(s) | 143 |
| EcoT38I | GRGCYC | 1 cut(s) | 59 |
| FaeI | CATG | 1 cut(s) | 169 |
| FaiI | YATR | 5 cut(s) | 18, 20, 126, 131, 167 |
| FatI | CATG | 1 cut(s) | 165 |
| FriOI | GRGCYC | 1 cut(s) | 59 |
| FspBI | CTAG | 1 cut(s) | 174 |
| FspEI | CC | 9 cut(s) | 13, 37, 38, 39, 92, 93, 103, 125, 186 |
| Hin1II | CATG | 1 cut(s) | 169 |
| HinfI | GANTC | 1 cut(s) | 111 |
| Hpy188I | TCNGA | 3 cut(s) | 91, 116, 149 |
| Hpy188III | TCNNGA | 1 cut(s) | 38 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| LpnPI | CCDG | 1 cut(s) | 125 |
| MaeI | CTAG | 1 cut(s) | 174 |
| MhlI | GDGCHC | 1 cut(s) | 59 |
| MluCI | AATT | 1 cut(s) | 143 |
| NlaIII | CATG | 1 cut(s) | 169 |
| PfeI | GAWTC | 1 cut(s) | 111 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 33, 65 |
| RsaI | GTAC | 1 cut(s) | 51 |
| RsaNI | GTAC | 1 cut(s) | 50 |
| SduI | GDGCHC | 1 cut(s) | 59 |
| SetI | ASST | 4 cut(s) | 32, 103, 155, 191 |
| SgeI | CNNG | 7 cut(s) | 50, 59, 65, 152, 172, 178, 186 |
| Sse9I | AATT | 1 cut(s) | 143 |
| SspMI | CTAG | 1 cut(s) | 174 |
| TaqI | TCGA | 1 cut(s) | 39 |
| TasI | AATT | 1 cut(s) | 143 |
| TfiI | GAWTC | 1 cut(s) | 111 |
| TspDTI | ATGAA | 2 cut(s) | 17, 154 |
| XapI | RAATTY | 1 cut(s) | 143 |
| XspI | CTAG | 1 cut(s) | 174 |