No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g15281 FvH4_6g23002 |
| prunus_persica | Prupe.7G011700_v2.0.a1 Prupe.8G060700_v2.0.a1 |
| pyrus_communis | pycom11g23400 pycom11g23410 |
| rosa_chinensis | RchiOBHm_Chr3g0493121 RchiOBHm_Chr4g0416701 RchiOBHm_Chr5g0030191 RchiOBHm_Chr5g0030261 RchiOBHm_Chr5g0030451 RchiOBHm_Chr5g0030531 |
| rosa_laevigata | RLG00000004075 RLG00000009332 RLG00000033223 |
| rosa_roxburghii | Rroxscaffold_1G00012180 Rroxscaffold_3G00221970 Rroxscaffold_5G00352040 Rroxscaffold_5G00352700 Rroxscaffold_5G00366920 Rroxscaffold_6G00401320 Rroxscaffold_7G00214040 |
| rosa_rugosa | Rorug05G0118200 Rorug05G0244100 Rorug05G0431600 |
| rosa_samantha | Rh2AG303900 Rh5BG493400 Rh5CG358400 Rh5CG517400 Rh5DG213900 Rh6BG199100 Rh7DG307600 |
| rosa_wichuraiana | Rw5G019230 Rw6G002650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 164, 231 |
| AcsI | RAATTY | 1 cut(s) | 22 |
| AfaI | GTAC | 1 cut(s) | 35 |
| AgsI | TTSAA | 2 cut(s) | 22, 102 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 234, 266 |
| AluBI | AGCT | 2 cut(s) | 293, 298 |
| AluI | AGCT | 2 cut(s) | 293, 298 |
| AlwI | GGATC | 2 cut(s) | 164, 231 |
| ApoI | RAATTY | 1 cut(s) | 22 |
| AsuHPI | GGTGA | 1 cut(s) | 41 |
| BbsI | GAAGAC | 1 cut(s) | 84 |
| BlpI | GCTNAGC | 1 cut(s) | 294 |
| BmcAI | AGTACT | 1 cut(s) | 35 |
| BpiI | GAAGAC | 1 cut(s) | 84 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 294 |
| BseGI | GGATG | 1 cut(s) | 19 |
| BseMII | CTCAG | 1 cut(s) | 63 |
| Bsp143I | GATC | 2 cut(s) | 169, 223 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 294 |
| BspCNI | CTCAG | 1 cut(s) | 64 |
| BspPI | GGATC | 2 cut(s) | 164, 231 |
| BssMI | GATC | 2 cut(s) | 169, 223 |
| BstDEI | CTNAG | 2 cut(s) | 72, 294 |
| BstF5I | GGATG | 1 cut(s) | 19 |
| BstKTI | GATC | 2 cut(s) | 172, 226 |
| BstMBI | GATC | 2 cut(s) | 169, 223 |
| BstV2I | GAAGAC | 1 cut(s) | 84 |
| BtsCI | GGATG | 1 cut(s) | 19 |
| BtsIMutI | CAGTG | 2 cut(s) | 156, 304 |
| Csp6I | GTAC | 1 cut(s) | 34 |
| CviJI | RGCY | 3 cut(s) | 138, 293, 298 |
| CviKI_1 | RGCY | 3 cut(s) | 138, 293, 298 |
| CviQI | GTAC | 1 cut(s) | 34 |
| DdeI | CTNAG | 2 cut(s) | 72, 294 |
| DpnI | GATC | 2 cut(s) | 171, 225 |
| DpnII | GATC | 2 cut(s) | 169, 223 |
| FaiI | YATR | 6 cut(s) | 39, 47, 53, 80, 85, 87 |
| FauNDI | CATATG | 1 cut(s) | 85 |
| FokI | GGATG | 1 cut(s) | 26 |
| HinfI | GANTC | 2 cut(s) | 5, 89 |
| HphI | GGTGA | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 1 cut(s) | 107 |
| Hpy188I | TCNGA | 1 cut(s) | 214 |
| Hpy8I | GTNNAC | 1 cut(s) | 107 |
| HpyF3I | CTNAG | 2 cut(s) | 72, 294 |
| Kzo9I | GATC | 2 cut(s) | 169, 223 |
| LpnPI | CCDG | 1 cut(s) | 84 |
| MalI | GATC | 2 cut(s) | 171, 225 |
| MboI | GATC | 2 cut(s) | 169, 223 |
| MboII | GAAGA | 2 cut(s) | 84, 194 |
| MluCI | AATT | 2 cut(s) | 22, 243 |
| MlyI | GAGTC | 1 cut(s) | 98 |
| MnlI | CCTC | 3 cut(s) | 142, 232, 251 |
| MseI | TTAA | 1 cut(s) | 285 |
| NdeI | CATATG | 1 cut(s) | 85 |
| NdeII | GATC | 2 cut(s) | 169, 223 |
| PleI | GAGTC | 1 cut(s) | 97 |
| PpsI | GAGTC | 1 cut(s) | 97 |
| RsaI | GTAC | 1 cut(s) | 35 |
| RsaNI | GTAC | 1 cut(s) | 34 |
| SaqAI | TTAA | 1 cut(s) | 285 |
| Sau3AI | GATC | 2 cut(s) | 169, 223 |
| ScaI | AGTACT | 1 cut(s) | 35 |
| SchI | GAGTC | 1 cut(s) | 98 |
| SetI | ASST | 7 cut(s) | 118, 145, 153, 166, 262, 295, 300 |
| SgeI | CNNG | 4 cut(s) | 21, 83, 108, 114 |
| Sse9I | AATT | 2 cut(s) | 22, 243 |
| TasI | AATT | 2 cut(s) | 22, 243 |
| TatI | WGTACW | 1 cut(s) | 33 |
| Tru1I | TTAA | 1 cut(s) | 285 |
| Tru9I | TTAA | 1 cut(s) | 285 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TspDTI | ATGAA | 1 cut(s) | 285 |
| TspGWI | ACGGA | 1 cut(s) | 220 |
| TspRI | CASTG | 1 cut(s) | 163 |
| XapI | RAATTY | 1 cut(s) | 22 |
| ZrmI | AGTACT | 1 cut(s) | 35 |