pycom12g16170

Phosphoinositide phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
18570311 .. 18571689
1379 bp
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UTR
Exon/CDS
Intron
pycom12g16170.5

Sequence Viewer

Length: 372 bp
ATGGTACACCACTACATGTTTTTATCACCAAACAAAACCTCGACGATATACGGAGTGGCGGGAACGATCAGATTGCTTACAGGAAATTATGCTCTTGTAATAACTTCGCGGACGGAAGTTGGGACTTATCTCGGCTTCCCTGTTTATCGAGTGACCTCGATGAGGTTTCTGTCCTACAACGAGGGTATGAAGAATTCAACTGCTCCGGAGAAAAAGGATGAGGCGTACTTCATGGCTCTGTTGAAAACAGTCCAATCAACTTCGGGGCTGTACTTCTCGTACAAGACTGATATAACACTAGACTTTCAAAGAAGATGTAAGTTAGTGGAAGGATGGATGGCCAAACCAATATGGAAGCAGGCTGATCCTTGA

Protein Analysis

124

Amino Acids

14.09

Weight (kDa)

9.49

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 109
AccIII TCCGGA 1 cut(s) 205
AciI CCGC 2 cut(s) 59, 109
AclWI GGATC 1 cut(s) 359
AcoI YGGCCR 1 cut(s) 339
AcsI RAATTY 1 cut(s) 193
AfaI GTAC 4 cut(s) 6, 227, 272, 281
AfiI CCNNNNNNNGG 1 cut(s) 162
AflIII ACRYGT 1 cut(s) 15
AgsI TTSAA 3 cut(s) 198, 244, 308
AlwI GGATC 1 cut(s) 359
Aor13HI TCCGGA 1 cut(s) 205
AoxI GGCC 1 cut(s) 339
ApoI RAATTY 1 cut(s) 193
AsuHPI GGTGA 1 cut(s) 18
BalI TGGCCA 1 cut(s) 341
BccI CCATC 2 cut(s) 327, 331
BcgI CGANNNNNNTGC 2 cut(s) 55, 89
BfaI CTAG 1 cut(s) 299
BsaWI WCCGGW 1 cut(s) 205
Bsc4I CCNNNNNNNGG 1 cut(s) 162
BseAI TCCGGA 1 cut(s) 205
BseGI GGATG 3 cut(s) 223, 338, 342
BseLI CCNNNNNNNGG 1 cut(s) 162
Bsh1236I CGCG 1 cut(s) 109
BshFI GGCC 1 cut(s) 341
BsiSI CCGG 1 cut(s) 206
BslFI GGGAC 1 cut(s) 136
BslI CCNNNNNNNGG 1 cut(s) 162
BsmFI GGGAC 1 cut(s) 136
BsnI GGCC 1 cut(s) 341
Bsp13I TCCGGA 1 cut(s) 205
Bsp143I GATC 2 cut(s) 66, 364
BspACI CCGC 2 cut(s) 59, 109
BspANI GGCC 1 cut(s) 341
BspEI TCCGGA 1 cut(s) 205
BspFNI CGCG 1 cut(s) 109
BspPI GGATC 1 cut(s) 359
BssMI GATC 2 cut(s) 66, 364
Bst4CI ACNGT 1 cut(s) 250
BstC8I GCNNGC 1 cut(s) 360
BstENI CCTNNNNNAGG 1 cut(s) 160
BstF5I GGATG 3 cut(s) 223, 338, 342
BstFNI CGCG 1 cut(s) 109
BstKTI GATC 2 cut(s) 69, 367
BstMBI GATC 2 cut(s) 66, 364
BstNSI RCATGY 1 cut(s) 19
BstUI CGCG 1 cut(s) 109
BsuRI GGCC 1 cut(s) 341
BtsCI GGATG 3 cut(s) 223, 338, 342
Cac8I GCNNGC 1 cut(s) 360
Csp6I GTAC 4 cut(s) 5, 226, 271, 280
CviAII CATG 2 cut(s) 16, 232
CviJI RGCY 5 cut(s) 135, 236, 268, 341, 362
CviKI_1 RGCY 5 cut(s) 135, 236, 268, 341, 362
CviQI GTAC 4 cut(s) 5, 226, 271, 280
DpnI GATC 2 cut(s) 68, 366
DpnII GATC 2 cut(s) 66, 364
EaeI YGGCCR 1 cut(s) 339
EcoNI CCTNNNNNAGG 1 cut(s) 160
EcoRI GAATTC 1 cut(s) 193
FaeI CATG 2 cut(s) 19, 235
FaiI YATR 7 cut(s) 17, 49, 90, 188, 233, 293, 352
FaqI GGGAC 1 cut(s) 136
FatI CATG 2 cut(s) 15, 231
FauI CCCGC 1 cut(s) 52
FokI GGATG 3 cut(s) 230, 345, 349
FspBI CTAG 1 cut(s) 299
HaeIII GGCC 1 cut(s) 341
HapII CCGG 1 cut(s) 206
Hin1II CATG 2 cut(s) 19, 235
HpaII CCGG 1 cut(s) 206
HphI GGTGA 1 cut(s) 18
Hpy166II GTNNAC 1 cut(s) 7
Hpy188I TCNGA 1 cut(s) 71
Hpy188III TCNNGA 1 cut(s) 206
Hpy8I GTNNAC 1 cut(s) 7
Hpy99I CGWCG 1 cut(s) 46
HpyAV CCTTC 1 cut(s) 323
HpyCH4III ACNGT 1 cut(s) 250
Hsp92II CATG 2 cut(s) 19, 235
Kpn2I TCCGGA 1 cut(s) 205
Kzo9I GATC 2 cut(s) 66, 364
LmnI GCTCC 1 cut(s) 208
LpnPI CCDG 4 cut(s) 66, 153, 219, 344
MaeI CTAG 1 cut(s) 299
MaeIII GTNAC 1 cut(s) 151
MalI GATC 2 cut(s) 68, 366
MboI GATC 2 cut(s) 66, 364
MboII GAAGA 2 cut(s) 202, 324
MlsI TGGCCA 1 cut(s) 341
MluCI AATT 2 cut(s) 85, 193
MluNI TGGCCA 1 cut(s) 341
MnlI CCTC 5 cut(s) 49, 156, 166, 175, 214
Mox20I TGGCCA 1 cut(s) 341
MroI TCCGGA 1 cut(s) 205
MscI TGGCCA 1 cut(s) 341
Msp20I TGGCCA 1 cut(s) 341
MspI CCGG 1 cut(s) 206
MvnI CGCG 1 cut(s) 109
NdeII GATC 2 cut(s) 66, 364
NlaIII CATG 2 cut(s) 19, 235
NmeAIII GCCGAG 1 cut(s) 111
NmuCI GTSAC 1 cut(s) 151
NspI RCATGY 1 cut(s) 19
PciI ACATGT 1 cut(s) 15
PscI ACATGT 1 cut(s) 15
RsaI GTAC 4 cut(s) 6, 227, 272, 281
RsaNI GTAC 4 cut(s) 5, 226, 271, 280
Sau3AI GATC 2 cut(s) 66, 364
SetI ASST 3 cut(s) 41, 158, 167
Sse9I AATT 2 cut(s) 85, 193
SsiI CCGC 2 cut(s) 59, 109
SspMI CTAG 1 cut(s) 299
TaaI ACNGT 1 cut(s) 250
TaqI TCGA 3 cut(s) 41, 148, 158
TasI AATT 2 cut(s) 85, 193
TatI WGTACW 1 cut(s) 270
TseFI GTSAC 1 cut(s) 151
Tsp45I GTSAC 1 cut(s) 151
TspDTI ATGAA 2 cut(s) 203, 220
TspGWI ACGGA 2 cut(s) 66, 128
XagI CCTNNNNNAGG 1 cut(s) 160
XapI RAATTY 1 cut(s) 193
XceI RCATGY 1 cut(s) 19
XspI CTAG 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.