60S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51830 |
| fragaria_vesca | FvH4_6g11241 |
| malus_domestica | MD12G1169400.v1.1 MD12G1169500.v1.1 MD12G1171200.v1.1 MD12G1171300.v1.1 |
| pyrus_communis | pycom04g14100 pycom12g10980 pycom12g16070 pycom12g16170 pycom16g21050 |
| rosa_chinensis | RchiOBHm_Chr1g0321071 RchiOBHm_Chr1g0352571 RchiOBHm_Chr3g0454191 RchiOBHm_Chr3g0462761 RchiOBHm_Chr4g0407511 RchiOBHm_Chr7g0208621 |
| rosa_laevigata | RLG00000017724 RLG00000035314 |
| rosa_multiflora | Rmu_co8257277.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00415040 Rroxscaffold_7G00196780 |
| rosa_samantha | Rh1AG112600 Rh1CG178800 Rh7AG239800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 117 |
| AccII | CGCG | 1 cut(s) | 213 |
| AciI | CCGC | 2 cut(s) | 108, 174 |
| AclWI | GGATC | 2 cut(s) | 193, 216 |
| AcuI | CTGAAG | 1 cut(s) | 219 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 117 |
| AgsI | TTSAA | 1 cut(s) | 245 |
| AluBI | AGCT | 1 cut(s) | 127 |
| AluI | AGCT | 1 cut(s) | 127 |
| Alw26I | GTCTC | 2 cut(s) | 98, 160 |
| AlwI | GGATC | 2 cut(s) | 193, 216 |
| AoxI | GGCC | 1 cut(s) | 57 |
| AspS9I | GGNCC | 1 cut(s) | 163 |
| AvaII | GGWCC | 1 cut(s) | 163 |
| BbsI | GAAGAC | 1 cut(s) | 255 |
| BcoDI | GTCTC | 2 cut(s) | 98, 160 |
| Bme18I | GGWCC | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 1 cut(s) | 163 |
| BmiI | GGNNCC | 2 cut(s) | 165, 204 |
| BmrI | ACTGGG | 1 cut(s) | 127 |
| BmuI | ACTGGG | 1 cut(s) | 127 |
| BpiI | GAAGAC | 1 cut(s) | 255 |
| BsaI | GGTCTC | 2 cut(s) | 98, 160 |
| BsaJI | CCNNGG | 3 cut(s) | 99, 111, 150 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 117 |
| Bse1I | ACTGG | 2 cut(s) | 60, 122 |
| BseDI | CCNNGG | 3 cut(s) | 99, 111, 150 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BseNI | ACTGG | 2 cut(s) | 60, 122 |
| BseRI | GAGGAG | 1 cut(s) | 258 |
| Bsh1236I | CGCG | 1 cut(s) | 213 |
| Bsh1285I | CGRYCG | 1 cut(s) | 217 |
| BshFI | GGCC | 1 cut(s) | 59 |
| BsiEI | CGRYCG | 1 cut(s) | 217 |
| BsiSI | CCGG | 1 cut(s) | 206 |
| BslFI | GGGAC | 1 cut(s) | 149 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BsmAI | GTCTC | 2 cut(s) | 98, 160 |
| BsmFI | GGGAC | 1 cut(s) | 149 |
| BsnI | GGCC | 1 cut(s) | 59 |
| Bso31I | GGTCTC | 2 cut(s) | 98, 160 |
| Bsp143I | GATC | 2 cut(s) | 185, 208 |
| Bsp68I | TCGCGA | 1 cut(s) | 213 |
| BspACI | CCGC | 2 cut(s) | 108, 174 |
| BspANI | GGCC | 1 cut(s) | 59 |
| BspFNI | CGCG | 1 cut(s) | 213 |
| BspLI | GGNNCC | 2 cut(s) | 165, 204 |
| BspPI | GGATC | 2 cut(s) | 193, 216 |
| BspTNI | GGTCTC | 2 cut(s) | 98, 160 |
| BsrI | ACTGG | 2 cut(s) | 60, 122 |
| BssECI | CCNNGG | 3 cut(s) | 99, 111, 150 |
| BssMI | GATC | 2 cut(s) | 185, 208 |
| BssT1I | CCWWGG | 3 cut(s) | 99, 111, 150 |
| Bst4CI | ACNGT | 3 cut(s) | 133, 143, 218 |
| Bst6I | CTCTTC | 2 cut(s) | 35, 78 |
| BstFNI | CGCG | 1 cut(s) | 213 |
| BstKTI | GATC | 2 cut(s) | 188, 211 |
| BstMAI | GTCTC | 2 cut(s) | 98, 160 |
| BstMBI | GATC | 2 cut(s) | 185, 208 |
| BstMCI | CGRYCG | 1 cut(s) | 217 |
| BstUI | CGCG | 1 cut(s) | 213 |
| BstV2I | GAAGAC | 1 cut(s) | 255 |
| BstX2I | RGATCY | 1 cut(s) | 185 |
| BstYI | RGATCY | 1 cut(s) | 185 |
| BsuRI | GGCC | 1 cut(s) | 59 |
| BtsIMutI | CAGTG | 1 cut(s) | 53 |
| BtuMI | TCGCGA | 1 cut(s) | 213 |
| Cfr13I | GGNCC | 1 cut(s) | 163 |
| CviJI | RGCY | 4 cut(s) | 59, 127, 149, 205 |
| CviKI_1 | RGCY | 4 cut(s) | 59, 127, 149, 205 |
| DpnI | GATC | 2 cut(s) | 187, 210 |
| DpnII | GATC | 2 cut(s) | 185, 208 |
| Eam1104I | CTCTTC | 2 cut(s) | 35, 78 |
| EarI | CTCTTC | 2 cut(s) | 35, 78 |
| Eco130I | CCWWGG | 3 cut(s) | 99, 111, 150 |
| Eco31I | GGTCTC | 2 cut(s) | 98, 160 |
| Eco47I | GGWCC | 1 cut(s) | 163 |
| Eco57I | CTGAAG | 1 cut(s) | 219 |
| EcoT14I | CCWWGG | 3 cut(s) | 99, 111, 150 |
| ErhI | CCWWGG | 3 cut(s) | 99, 111, 150 |
| FaiI | YATR | 1 cut(s) | 274 |
| FaqI | GGGAC | 1 cut(s) | 149 |
| HaeIII | GGCC | 1 cut(s) | 59 |
| HapII | CCGG | 1 cut(s) | 206 |
| HincII | GTYRAC | 1 cut(s) | 228 |
| HindII | GTYRAC | 1 cut(s) | 228 |
| HinfI | GANTC | 1 cut(s) | 251 |
| HpaII | CCGG | 1 cut(s) | 206 |
| Hpy166II | GTNNAC | 1 cut(s) | 228 |
| Hpy188I | TCNGA | 1 cut(s) | 238 |
| Hpy188III | TCNNGA | 2 cut(s) | 91, 212 |
| Hpy8I | GTNNAC | 1 cut(s) | 228 |
| HpyCH4III | ACNGT | 3 cut(s) | 133, 143, 218 |
| Kzo9I | GATC | 2 cut(s) | 185, 208 |
| LmnI | GCTCC | 1 cut(s) | 202 |
| LpnPI | CCDG | 3 cut(s) | 41, 103, 219 |
| MalI | GATC | 2 cut(s) | 187, 210 |
| MboI | GATC | 2 cut(s) | 185, 208 |
| MboII | GAAGA | 6 cut(s) | 22, 42, 65, 180, 257, 260 |
| MflI | RGATCY | 1 cut(s) | 185 |
| MluCI | AATT | 2 cut(s) | 65, 86 |
| MlyI | GAGTC | 1 cut(s) | 245 |
| MnlI | CCTC | 5 cut(s) | 44, 52, 70, 178, 187 |
| MseI | TTAA | 1 cut(s) | 123 |
| MspI | CCGG | 1 cut(s) | 206 |
| MvnI | CGCG | 1 cut(s) | 213 |
| NdeII | GATC | 2 cut(s) | 185, 208 |
| NlaIV | GGNNCC | 2 cut(s) | 165, 204 |
| NruI | TCGCGA | 1 cut(s) | 213 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 117 |
| PleI | GAGTC | 1 cut(s) | 245 |
| PpsI | GAGTC | 1 cut(s) | 245 |
| PspN4I | GGNNCC | 2 cut(s) | 165, 204 |
| PspPI | GGNCC | 1 cut(s) | 163 |
| PsuI | RGATCY | 1 cut(s) | 185 |
| RruI | TCGCGA | 1 cut(s) | 213 |
| SaqAI | TTAA | 1 cut(s) | 123 |
| Sau3AI | GATC | 2 cut(s) | 185, 208 |
| Sau96I | GGNCC | 1 cut(s) | 163 |
| SchI | GAGTC | 1 cut(s) | 245 |
| SetI | ASST | 3 cut(s) | 8, 129, 156 |
| SinI | GGWCC | 1 cut(s) | 163 |
| Sse9I | AATT | 2 cut(s) | 65, 86 |
| SsiI | CCGC | 2 cut(s) | 108, 174 |
| StyI | CCWWGG | 3 cut(s) | 99, 111, 150 |
| TaaI | ACNGT | 3 cut(s) | 133, 143, 218 |
| TaqI | TCGA | 2 cut(s) | 82, 90 |
| TasI | AATT | 2 cut(s) | 65, 86 |
| Tru1I | TTAA | 1 cut(s) | 123 |
| Tru9I | TTAA | 1 cut(s) | 123 |
| TscAI | CASTG | 1 cut(s) | 60 |
| TspRI | CASTG | 1 cut(s) | 60 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 117 |
| VpaK11BI | GGWCC | 1 cut(s) | 163 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 157 |