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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38580 AT2G38580 AT2G38580 |
| fragaria_vesca | FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 |
| malus_domestica | MD12G1191100.v1.1 |
| prunus_persica | Prupe.6G296200_v2.0.a1 Prupe.6G296200_v2.0.a1 |
| pyrus_communis | pycom04g15590 pycom12g17830 |
| rosa_chinensis | RchiOBHm_Chr3g0460131 |
| rosa_laevigata | RLG00000025041 |
| rosa_multiflora | Rmu_sc0000449.1_g000051 Rmu_sc0010911.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00419810 |
| rosa_rugosa | Rorug03G0040200 Rorug03G0040300 Rorug03G0040400 |
| rosa_samantha | Rh3AG098200 Rh3BG101300 Rh3CG103400 Rh3DG102600 Rh5BG300100 Rh5DG309000 Rh7DG221400 |
| rosa_wichuraiana | Rw3G008290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1293 |
| AccI | GTMKAC | 5 cut(s) | 630, 697, 778, 1134, 1400 |
| AccIII | TCCGGA | 1 cut(s) | 206 |
| AciI | CCGC | 5 cut(s) | 251, 266, 461, 739, 1677 |
| AclI | AACGTT | 1 cut(s) | 977 |
| AclWI | GGATC | 3 cut(s) | 198, 211, 1364 |
| AcoI | YGGCCR | 1 cut(s) | 439 |
| AcsI | RAATTY | 1 cut(s) | 1539 |
| AcuI | CTGAAG | 2 cut(s) | 809, 1371 |
| AfaI | GTAC | 4 cut(s) | 77, 226, 1056, 1344 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 213, 289, 580, 1631 |
| AgsI | TTSAA | 5 cut(s) | 1189, 1202, 1307, 1317, 1538 |
| AhlI | ACTAGT | 1 cut(s) | 1216 |
| AjnI | CCWGG | 3 cut(s) | 441, 944, 1040 |
| AluBI | AGCT | 7 cut(s) | 551, 903, 1072, 1249, 1355, 1417, 1622 |
| AluI | AGCT | 7 cut(s) | 551, 903, 1072, 1249, 1355, 1417, 1622 |
| Alw21I | GWGCWC | 3 cut(s) | 469, 1018, 1639 |
| Alw26I | GTCTC | 3 cut(s) | 480, 486, 935 |
| AlwI | GGATC | 3 cut(s) | 198, 211, 1364 |
| Aor13HI | TCCGGA | 1 cut(s) | 206 |
| AoxI | GGCC | 4 cut(s) | 115, 348, 439, 453 |
| ApeKI | GCWGC | 4 cut(s) | 395, 1205, 1355, 1487 |
| ApoI | RAATTY | 1 cut(s) | 1539 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1533 |
| AspS9I | GGNCC | 1 cut(s) | 116 |
| AsuC2I | CCSGG | 1 cut(s) | 124 |
| AsuHPI | GGTGA | 2 cut(s) | 1273, 1289 |
| BalI | TGGCCA | 1 cut(s) | 441 |
| BamHI | GGATCC | 1 cut(s) | 203 |
| BanI | GGYRCC | 1 cut(s) | 1293 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 168, 200 |
| Bbv12I | GWGCWC | 3 cut(s) | 469, 1018, 1639 |
| BbvI | GCAGC | 4 cut(s) | 407, 1217, 1342, 1474 |
| BccI | CCATC | 2 cut(s) | 778, 1069 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1005, 1039, 1152, 1186 |
| BciT130I | CCWGG | 3 cut(s) | 443, 946, 1042 |
| BciVI | GTATCC | 3 cut(s) | 577, 1393, 1522 |
| BcnI | CCSGG | 1 cut(s) | 124 |
| BcoDI | GTCTC | 3 cut(s) | 480, 486, 935 |
| BcuI | ACTAGT | 1 cut(s) | 1216 |
| BfaI | CTAG | 7 cut(s) | 540, 926, 1005, 1098, 1217, 1571, 1665 |
| BfmI | CTRYAG | 1 cut(s) | 779 |
| BfuI | GTATCC | 3 cut(s) | 577, 1393, 1522 |
| BisI | GCNGC | 5 cut(s) | 252, 396, 1206, 1356, 1488 |
| BlsI | GCNGC | 5 cut(s) | 253, 397, 1207, 1357, 1489 |
| Bme1390I | CCNGG | 4 cut(s) | 124, 443, 946, 1042 |
| BmgT120I | GGNCC | 1 cut(s) | 116 |
| BmiI | GGNNCC | 3 cut(s) | 205, 572, 1295 |
| BmrFI | CCNGG | 4 cut(s) | 124, 443, 946, 1042 |
| BmsI | GCATC | 5 cut(s) | 136, 409, 466, 1157, 1443 |
| BpmI | CTGGAG | 1 cut(s) | 1128 |
| BpuEI | CTTGAG | 1 cut(s) | 1145 |
| BpuMI | CCSGG | 1 cut(s) | 124 |
| BsaAI | YACGTR | 2 cut(s) | 75, 695 |
| BsaI | GGTCTC | 1 cut(s) | 935 |
| BsaWI | WCCGGW | 3 cut(s) | 206, 244, 1644 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 950, 980 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 213, 289, 580, 1631 |
| Bse118I | RCCGGY | 1 cut(s) | 1601 |
| Bse1I | ACTGG | 3 cut(s) | 1337, 1359, 1508 |
| Bse3DI | GCAATG | 3 cut(s) | 442, 532, 999 |
| BseAI | TCCGGA | 1 cut(s) | 206 |
| BseBI | CCWGG | 3 cut(s) | 443, 946, 1042 |
| BseGI | GGATG | 3 cut(s) | 127, 152, 1555 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 213, 289, 580, 1631 |
| BseMI | GCAATG | 3 cut(s) | 442, 532, 999 |
| BseMII | CTCAG | 5 cut(s) | 184, 404, 549, 1208, 1380 |
| BseNI | ACTGG | 3 cut(s) | 1337, 1359, 1508 |
| BseXI | GCAGC | 4 cut(s) | 407, 1217, 1342, 1474 |
| BshFI | GGCC | 4 cut(s) | 117, 350, 441, 455 |
| BshNI | GGYRCC | 1 cut(s) | 1293 |
| BsiHKAI | GWGCWC | 3 cut(s) | 469, 1018, 1639 |
| BsiSI | CCGG | 7 cut(s) | 124, 207, 245, 372, 399, 1602, 1645 |
| BsiWI | CGTACG | 1 cut(s) | 224 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 213, 289, 580, 1631 |
| BsmAI | GTCTC | 3 cut(s) | 480, 486, 935 |
| BsmBI | CGTCTC | 2 cut(s) | 480, 486 |
| BsmI | GAATGC | 2 cut(s) | 886, 1246 |
| BsnI | GGCC | 4 cut(s) | 117, 350, 441, 455 |
| Bso31I | GGTCTC | 1 cut(s) | 935 |
| Bsp1286I | GDGCHC | 3 cut(s) | 469, 1018, 1639 |
| Bsp13I | TCCGGA | 1 cut(s) | 206 |
| Bsp1407I | TGTACA | 1 cut(s) | 1054 |
| Bsp143I | GATC | 2 cut(s) | 203, 1369 |
| BspACI | CCGC | 5 cut(s) | 251, 266, 461, 739, 1677 |
| BspANI | GGCC | 4 cut(s) | 117, 350, 441, 455 |
| BspCNI | CTCAG | 5 cut(s) | 183, 403, 550, 1207, 1381 |
| BspEI | TCCGGA | 1 cut(s) | 206 |
| BspLI | GGNNCC | 3 cut(s) | 205, 572, 1295 |
| BspPI | GGATC | 3 cut(s) | 198, 211, 1364 |
| BspT107I | GGYRCC | 1 cut(s) | 1293 |
| BspTNI | GGTCTC | 1 cut(s) | 935 |
| BsrDI | GCAATG | 3 cut(s) | 442, 532, 999 |
| BsrFI | RCCGGY | 1 cut(s) | 1601 |
| BsrGI | TGTACA | 1 cut(s) | 1054 |
| BsrI | ACTGG | 3 cut(s) | 1337, 1359, 1508 |
| BssAI | RCCGGY | 1 cut(s) | 1601 |
| BssMI | GATC | 2 cut(s) | 203, 1369 |
| BssNAI | GTATAC | 2 cut(s) | 631, 698 |
| Bst1107I | GTATAC | 2 cut(s) | 631, 698 |
| Bst2UI | CCWGG | 3 cut(s) | 443, 946, 1042 |
| Bst4CI | ACNGT | 4 cut(s) | 13, 1107, 1293, 1303 |
| Bst6I | CTCTTC | 2 cut(s) | 308, 506 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1241 |
| BstAUI | TGTACA | 1 cut(s) | 1054 |
| BstBAI | YACGTR | 2 cut(s) | 75, 695 |
| BstC8I | GCNNGC | 1 cut(s) | 1210 |
| BstDEI | CTNAG | 5 cut(s) | 170, 390, 558, 1194, 1389 |
| BstF5I | GGATG | 3 cut(s) | 127, 152, 1555 |
| BstKTI | GATC | 2 cut(s) | 206, 1372 |
| BstMAI | GTCTC | 3 cut(s) | 480, 486, 935 |
| BstMBI | GATC | 2 cut(s) | 203, 1369 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 114, 1241 |
| BstNI | CCWGG | 3 cut(s) | 443, 946, 1042 |
| BstNSI | RCATGY | 3 cut(s) | 96, 1212, 1487 |
| BstSCI | CCNGG | 4 cut(s) | 122, 441, 944, 1040 |
| BstSFI | CTRYAG | 1 cut(s) | 779 |
| BstV1I | GCAGC | 4 cut(s) | 407, 1217, 1342, 1474 |
| BstX2I | RGATCY | 1 cut(s) | 203 |
| BstYI | RGATCY | 1 cut(s) | 203 |
| BstZ17I | GTATAC | 2 cut(s) | 631, 698 |
| BsuI | GTATCC | 3 cut(s) | 577, 1393, 1522 |
| BsuRI | GGCC | 4 cut(s) | 117, 350, 441, 455 |
| BtsCI | GGATG | 3 cut(s) | 127, 152, 1555 |
| BtsI | GCAGTG | 1 cut(s) | 52 |
| BtsIMutI | CAGTG | 5 cut(s) | 9, 52, 178, 1366, 1386 |
| Cac8I | GCNNGC | 1 cut(s) | 1210 |
| Cfr10I | RCCGGY | 1 cut(s) | 1601 |
| Cfr13I | GGNCC | 1 cut(s) | 116 |
| Csp6I | GTAC | 4 cut(s) | 76, 225, 1055, 1343 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 33 |
| CviAII | CATG | 6 cut(s) | 93, 518, 1084, 1178, 1209, 1484 |
| CviQI | GTAC | 4 cut(s) | 76, 225, 1055, 1343 |
| DdeI | CTNAG | 5 cut(s) | 170, 390, 558, 1194, 1389 |
| DpnI | GATC | 2 cut(s) | 205, 1371 |
| DpnII | GATC | 2 cut(s) | 203, 1369 |
| EaeI | YGGCCR | 1 cut(s) | 439 |
| Eam1104I | CTCTTC | 2 cut(s) | 308, 506 |
| EarI | CTCTTC | 2 cut(s) | 308, 506 |
| EciI | GGCGGA | 1 cut(s) | 281 |
| Eco147I | AGGCCT | 1 cut(s) | 455 |
| Eco31I | GGTCTC | 1 cut(s) | 935 |
| Eco57I | CTGAAG | 2 cut(s) | 809, 1371 |
| EcoO109I | RGGNCCY | 1 cut(s) | 116 |
| EcoRII | CCWGG | 3 cut(s) | 441, 944, 1040 |
| EcoT22I | ATGCAT | 1 cut(s) | 1458 |
| Esp3I | CGTCTC | 2 cut(s) | 480, 486 |
| FaeI | CATG | 6 cut(s) | 96, 521, 1087, 1181, 1212, 1487 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 887, 919 |
| FatI | CATG | 6 cut(s) | 92, 517, 1083, 1177, 1208, 1483 |
| FauI | CCCGC | 3 cut(s) | 454, 732, 1670 |
| FauNDI | CATATG | 1 cut(s) | 1657 |
| FblI | GTMKAC | 5 cut(s) | 630, 697, 778, 1134, 1400 |
| Fnu4HI | GCNGC | 5 cut(s) | 252, 396, 1206, 1356, 1488 |
| FokI | GGATG | 3 cut(s) | 114, 139, 1562 |
| Fsp4HI | GCNGC | 5 cut(s) | 252, 396, 1206, 1356, 1488 |
| FspBI | CTAG | 7 cut(s) | 540, 926, 1005, 1098, 1217, 1571, 1665 |
| GluI | GCNGC | 5 cut(s) | 252, 396, 1206, 1356, 1488 |
| GsuI | CTGGAG | 1 cut(s) | 1128 |
| HaeIII | GGCC | 4 cut(s) | 117, 350, 441, 455 |
| HapII | CCGG | 7 cut(s) | 124, 207, 245, 372, 399, 1602, 1645 |
| Hin1II | CATG | 6 cut(s) | 96, 521, 1087, 1181, 1212, 1487 |
| HincII | GTYRAC | 1 cut(s) | 1401 |
| HindII | GTYRAC | 1 cut(s) | 1401 |
| HindIII | AAGCTT | 2 cut(s) | 901, 1415 |
| HpaII | CCGG | 7 cut(s) | 124, 207, 245, 372, 399, 1602, 1645 |
| HphI | GGTGA | 2 cut(s) | 1273, 1289 |
| Hpy166II | GTNNAC | 7 cut(s) | 631, 698, 779, 1103, 1135, 1280, 1401 |
| Hpy188III | TCNNGA | 8 cut(s) | 207, 540, 926, 1124, 1349, 1499, 1571, 1585 |
| Hpy8I | GTNNAC | 7 cut(s) | 631, 698, 779, 1103, 1135, 1280, 1401 |
| Hpy99I | CGWCG | 3 cut(s) | 359, 419, 434 |
| HpyAV | CCTTC | 7 cut(s) | 59, 107, 129, 170, 634, 1252, 1651 |
| HpyCH4III | ACNGT | 4 cut(s) | 13, 1107, 1293, 1303 |
| HpyCH4IV | ACGT | 5 cut(s) | 74, 627, 694, 977, 1470 |
| HpyCH4V | TGCA | 7 cut(s) | 43, 886, 1111, 1163, 1235, 1244, 1456 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 114, 1241 |
| HpyF3I | CTNAG | 5 cut(s) | 170, 390, 558, 1194, 1389 |
| HpySE526I | ACGT | 5 cut(s) | 74, 627, 694, 977, 1470 |
| Hsp92II | CATG | 6 cut(s) | 96, 521, 1087, 1181, 1212, 1487 |
| Kpn2I | TCCGGA | 1 cut(s) | 206 |
| Kzo9I | GATC | 2 cut(s) | 203, 1369 |
| LmnI | GCTCC | 4 cut(s) | 268, 576, 1627, 1642 |
| Lsp1109I | GCAGC | 4 cut(s) | 407, 1217, 1342, 1474 |
| LweI | GCATC | 5 cut(s) | 136, 409, 466, 1157, 1443 |
| MaeI | CTAG | 7 cut(s) | 540, 926, 1005, 1098, 1217, 1571, 1665 |
| MaeII | ACGT | 5 cut(s) | 74, 627, 694, 977, 1470 |
| MaeIII | GTNAC | 2 cut(s) | 658, 1466 |
| MalI | GATC | 2 cut(s) | 205, 1371 |
| MboI | GATC | 2 cut(s) | 203, 1369 |
| MflI | RGATCY | 1 cut(s) | 203 |
| MhlI | GDGCHC | 3 cut(s) | 469, 1018, 1639 |
| MlsI | TGGCCA | 1 cut(s) | 441 |
| MluNI | TGGCCA | 1 cut(s) | 441 |
| MlyI | GAGTC | 1 cut(s) | 943 |
| MmeI | TCCRAC | 5 cut(s) | 181, 438, 817, 1005, 1527 |
| Mox20I | TGGCCA | 1 cut(s) | 441 |
| Mph1103I | ATGCAT | 1 cut(s) | 1458 |
| MroI | TCCGGA | 1 cut(s) | 206 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1533 |
| MscI | TGGCCA | 1 cut(s) | 441 |
| MseI | TTAA | 6 cut(s) | 137, 666, 729, 918, 969, 1116 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1461 |
| Msp20I | TGGCCA | 1 cut(s) | 441 |
| MspA1I | CMGCKG | 1 cut(s) | 1072 |
| MspI | CCGG | 7 cut(s) | 124, 207, 245, 372, 399, 1602, 1645 |
| MspR9I | CCNGG | 4 cut(s) | 124, 443, 946, 1042 |
| Mva1269I | GAATGC | 2 cut(s) | 886, 1246 |
| MvaI | CCWGG | 3 cut(s) | 443, 946, 1042 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 114, 1241 |
| NciI | CCSGG | 1 cut(s) | 124 |
| NdeI | CATATG | 1 cut(s) | 1657 |
| NdeII | GATC | 2 cut(s) | 203, 1369 |
| NlaIII | CATG | 6 cut(s) | 96, 521, 1087, 1181, 1212, 1487 |
| NlaIV | GGNNCC | 3 cut(s) | 205, 572, 1295 |
| NsiI | ATGCAT | 1 cut(s) | 1458 |
| NspI | RCATGY | 3 cut(s) | 96, 1212, 1487 |
| PaeI | GCATGC | 1 cut(s) | 1212 |
| PceI | AGGCCT | 1 cut(s) | 455 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 624 |
| PctI | GAATGC | 2 cut(s) | 886, 1246 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1533 |
| Pfl23II | CGTACG | 1 cut(s) | 224 |
| PfoI | TCCNGGA | 1 cut(s) | 1040 |
| PkrI | GCNGC | 5 cut(s) | 253, 397, 1207, 1357, 1489 |
| PleI | GAGTC | 1 cut(s) | 943 |
| PpsI | GAGTC | 1 cut(s) | 943 |
| Ppu21I | YACGTR | 2 cut(s) | 75, 695 |
| Psp1406I | AACGTT | 1 cut(s) | 977 |
| Psp6I | CCWGG | 3 cut(s) | 441, 944, 1040 |
| PspGI | CCWGG | 3 cut(s) | 441, 944, 1040 |
| PspLI | CGTACG | 1 cut(s) | 224 |
| PspN4I | GGNNCC | 3 cut(s) | 205, 572, 1295 |
| PspPI | GGNCC | 1 cut(s) | 116 |
| PsuI | RGATCY | 1 cut(s) | 203 |
| PvuII | CAGCTG | 1 cut(s) | 1072 |
| RsaI | GTAC | 4 cut(s) | 77, 226, 1056, 1344 |
| RsaNI | GTAC | 4 cut(s) | 76, 225, 1055, 1343 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1461 |
| SalI | GTCGAC | 1 cut(s) | 1399 |
| SaqAI | TTAA | 6 cut(s) | 137, 666, 729, 918, 969, 1116 |
| SatI | GCNGC | 5 cut(s) | 252, 396, 1206, 1356, 1488 |
| Sau3AI | GATC | 2 cut(s) | 203, 1369 |
| Sau96I | GGNCC | 1 cut(s) | 116 |
| SchI | GAGTC | 1 cut(s) | 943 |
| ScrFI | CCNGG | 4 cut(s) | 124, 443, 946, 1042 |
| SduI | GDGCHC | 3 cut(s) | 469, 1018, 1639 |
| SfaNI | GCATC | 5 cut(s) | 136, 409, 466, 1157, 1443 |
| SfcI | CTRYAG | 1 cut(s) | 779 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1461 |
| SmlI | CTYRAG | 1 cut(s) | 1124 |
| SmoI | CTYRAG | 1 cut(s) | 1124 |
| SpeI | ACTAGT | 1 cut(s) | 1216 |
| SphI | GCATGC | 1 cut(s) | 1212 |
| SseBI | AGGCCT | 1 cut(s) | 455 |
| SsiI | CCGC | 5 cut(s) | 251, 266, 461, 739, 1677 |
| SspMI | CTAG | 7 cut(s) | 540, 926, 1005, 1098, 1217, 1571, 1665 |
| StuI | AGGCCT | 1 cut(s) | 455 |
| StyD4I | CCNGG | 4 cut(s) | 122, 441, 944, 1040 |
| TaaI | ACNGT | 4 cut(s) | 13, 1107, 1293, 1303 |
| TaiI | ACGT | 5 cut(s) | 77, 630, 697, 980, 1473 |
| TaqI | TCGA | 4 cut(s) | 232, 618, 1400, 1584 |
| TatI | WGTACW | 1 cut(s) | 1054 |
| TauI | GCSGC | 1 cut(s) | 254 |
| Tru1I | TTAA | 6 cut(s) | 137, 666, 729, 918, 969, 1116 |
| Tru9I | TTAA | 6 cut(s) | 137, 666, 729, 918, 969, 1116 |
| TscAI | CASTG | 5 cut(s) | 16, 59, 178, 1366, 1393 |
| TseI | GCWGC | 4 cut(s) | 395, 1205, 1355, 1487 |
| TspDTI | ATGAA | 6 cut(s) | 227, 398, 807, 885, 1533, 1572 |
| TspGWI | ACGGA | 9 cut(s) | 51, 212, 393, 418, 504, 510, 548, 764, 1533 |
| TspRI | CASTG | 5 cut(s) | 16, 59, 178, 1366, 1393 |
| XapI | RAATTY | 1 cut(s) | 1539 |
| XbaI | TCTAGA | 3 cut(s) | 539, 925, 1570 |
| XceI | RCATGY | 3 cut(s) | 96, 1212, 1487 |
| XmiI | GTMKAC | 5 cut(s) | 630, 697, 778, 1134, 1400 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1533 |
| XspI | CTAG | 7 cut(s) | 540, 926, 1005, 1098, 1217, 1571, 1665 |
| Zsp2I | ATGCAT | 1 cut(s) | 1458 |