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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38580 AT2G38580 AT2G38580 |
| fragaria_vesca | FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 |
| malus_domestica | MD12G1191100.v1.1 |
| prunus_persica | Prupe.6G296200_v2.0.a1 Prupe.6G296200_v2.0.a1 |
| pyrus_communis | pycom04g15590 pycom12g17830 |
| rosa_chinensis | RchiOBHm_Chr3g0460131 |
| rosa_laevigata | RLG00000025041 |
| rosa_multiflora | Rmu_sc0000449.1_g000051 Rmu_sc0010911.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00419810 |
| rosa_rugosa | Rorug03G0040200 Rorug03G0040300 Rorug03G0040400 |
| rosa_samantha | Rh3AG098200 Rh3BG101300 Rh3CG103400 Rh3DG102600 Rh5BG300100 Rh5DG309000 Rh7DG221400 |
| rosa_wichuraiana | Rw3G008290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1124 |
| AccB1I | GGYRCC | 2 cut(s) | 230, 1124 |
| AccBSI | CCGCTC | 1 cut(s) | 1204 |
| AccI | GTMKAC | 2 cut(s) | 628, 1163 |
| AccII | CGCG | 1 cut(s) | 83 |
| AclI | AACGTT | 1 cut(s) | 241 |
| AclWI | GGATC | 3 cut(s) | 888, 1140, 1386 |
| AcsI | RAATTY | 3 cut(s) | 850, 1306, 1350 |
| AcuI | CTGAAG | 3 cut(s) | 681, 918, 1062 |
| AcyI | GRCGYC | 1 cut(s) | 1362 |
| AfaI | GTAC | 6 cut(s) | 367, 430, 564, 825, 1107, 1126 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 82, 553, 1445 |
| AgsI | TTSAA | 9 cut(s) | 281, 596, 917, 965, 1019, 1043, 1049, 1115, 1305 |
| AhlI | ACTAGT | 1 cut(s) | 631 |
| AjnI | CCWGG | 3 cut(s) | 587, 713, 809 |
| AluBI | AGCT | 6 cut(s) | 254, 672, 841, 1082, 1180, 1418 |
| AluI | AGCT | 6 cut(s) | 254, 672, 841, 1082, 1180, 1418 |
| Alw21I | GWGCWC | 2 cut(s) | 979, 1453 |
| Alw26I | GTCTC | 1 cut(s) | 1426 |
| Alw44I | GTGCAC | 2 cut(s) | 975, 1449 |
| AlwI | GGATC | 3 cut(s) | 888, 1140, 1386 |
| AoxI | GGCC | 4 cut(s) | 60, 174, 540, 1171 |
| ApaLI | GTGCAC | 2 cut(s) | 975, 1449 |
| ApeKI | GCWGC | 3 cut(s) | 93, 968, 1250 |
| ApoI | RAATTY | 3 cut(s) | 850, 1306, 1350 |
| AseI | ATTAAT | 1 cut(s) | 992 |
| Asp718I | GGTACC | 1 cut(s) | 1124 |
| AsuHPI | GGTGA | 3 cut(s) | 1036, 1163, 1302 |
| BaeGI | GKGCMC | 2 cut(s) | 979, 1453 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1089, 1122 |
| BanI | GGYRCC | 2 cut(s) | 230, 1124 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 480, 512 |
| Bbv12I | GWGCWC | 2 cut(s) | 979, 1453 |
| BbvI | GCAGC | 3 cut(s) | 105, 980, 1237 |
| BccI | CCATC | 4 cut(s) | 551, 838, 1061, 1136 |
| BceAI | ACGGC | 1 cut(s) | 1067 |
| BciT130I | CCWGG | 3 cut(s) | 589, 715, 811 |
| BcoDI | GTCTC | 1 cut(s) | 1426 |
| BcuI | ACTAGT | 1 cut(s) | 631 |
| BfaI | CTAG | 6 cut(s) | 632, 774, 858, 863, 1382, 1479 |
| BfmI | CTRYAG | 2 cut(s) | 548, 695 |
| BglII | AGATCT | 1 cut(s) | 946 |
| BisI | GCNGC | 8 cut(s) | 94, 114, 117, 120, 177, 969, 1202, 1251 |
| BlsI | GCNGC | 8 cut(s) | 95, 115, 118, 121, 178, 970, 1203, 1252 |
| Bme1390I | CCNGG | 3 cut(s) | 589, 715, 811 |
| BmiI | GGNNCC | 2 cut(s) | 232, 1126 |
| BmrFI | CCNGG | 3 cut(s) | 589, 715, 811 |
| BmsI | GCATC | 4 cut(s) | 193, 448, 1297, 1423 |
| BpuEI | CTTGAG | 1 cut(s) | 905 |
| BsaBI | GATNNNNATC | 1 cut(s) | 207 |
| BsaHI | GRCGYC | 1 cut(s) | 1362 |
| BsaWI | WCCGGW | 2 cut(s) | 1148, 1458 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 593, 623, 1420, 1450 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 82, 553, 1445 |
| Bse1I | ACTGG | 3 cut(s) | 984, 1109, 1329 |
| Bse3DI | GCAATG | 1 cut(s) | 163 |
| Bse8I | GATNNNNATC | 1 cut(s) | 207 |
| BseBI | CCWGG | 3 cut(s) | 589, 715, 811 |
| BseGI | GGATG | 3 cut(s) | 454, 543, 1288 |
| BseJI | GATNNNNATC | 1 cut(s) | 207 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 82, 553, 1445 |
| BseMI | GCAATG | 1 cut(s) | 163 |
| BseMII | CTCAG | 2 cut(s) | 252, 770 |
| BseNI | ACTGG | 3 cut(s) | 984, 1109, 1329 |
| BseRI | GAGGAG | 2 cut(s) | 629, 1226 |
| BseSI | GKGCMC | 2 cut(s) | 979, 1453 |
| BseXI | GCAGC | 3 cut(s) | 105, 980, 1237 |
| BseYI | CCCAGC | 1 cut(s) | 1242 |
| BsgI | GTGCAG | 1 cut(s) | 1515 |
| Bsh1236I | CGCG | 1 cut(s) | 83 |
| BshFI | GGCC | 4 cut(s) | 62, 176, 542, 1173 |
| BshNI | GGYRCC | 2 cut(s) | 230, 1124 |
| BsiHKAI | GWGCWC | 2 cut(s) | 979, 1453 |
| BsiSI | CCGG | 3 cut(s) | 153, 1149, 1459 |
| BslFI | GGGAC | 1 cut(s) | 59 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 82, 553, 1445 |
| BsmAI | GTCTC | 1 cut(s) | 1426 |
| BsmFI | GGGAC | 1 cut(s) | 59 |
| BsmI | GAATGC | 1 cut(s) | 1009 |
| BsnI | GGCC | 4 cut(s) | 62, 176, 542, 1173 |
| Bsp1286I | GDGCHC | 2 cut(s) | 979, 1453 |
| Bsp1407I | TGTACA | 2 cut(s) | 562, 823 |
| Bsp143I | GATC | 4 cut(s) | 880, 946, 1145, 1378 |
| BspANI | GGCC | 4 cut(s) | 62, 176, 542, 1173 |
| BspCNI | CTCAG | 2 cut(s) | 253, 769 |
| BspFNI | CGCG | 1 cut(s) | 83 |
| BspLI | GGNNCC | 2 cut(s) | 232, 1126 |
| BspPI | GGATC | 3 cut(s) | 888, 1140, 1386 |
| BspT107I | GGYRCC | 2 cut(s) | 230, 1124 |
| BsrBI | CCGCTC | 1 cut(s) | 1204 |
| BsrDI | GCAATG | 1 cut(s) | 163 |
| BsrGI | TGTACA | 2 cut(s) | 562, 823 |
| BsrI | ACTGG | 3 cut(s) | 984, 1109, 1329 |
| BssMI | GATC | 4 cut(s) | 880, 946, 1145, 1378 |
| BssNI | GRCGYC | 1 cut(s) | 1362 |
| Bst2UI | CCWGG | 3 cut(s) | 589, 715, 811 |
| Bst4CI | ACNGT | 1 cut(s) | 1102 |
| Bst6I | CTCTTC | 2 cut(s) | 23, 657 |
| BstACI | GRCGYC | 1 cut(s) | 1362 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 974 |
| BstAUI | TGTACA | 2 cut(s) | 562, 823 |
| BstC8I | GCNNGC | 2 cut(s) | 670, 1248 |
| BstDEI | CTNAG | 3 cut(s) | 261, 291, 756 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 551 |
| BstF5I | GGATG | 3 cut(s) | 454, 543, 1288 |
| BstFNI | CGCG | 1 cut(s) | 83 |
| BstKTI | GATC | 4 cut(s) | 883, 949, 1148, 1381 |
| BstMAI | GTCTC | 1 cut(s) | 1426 |
| BstMBI | GATC | 4 cut(s) | 880, 946, 1145, 1378 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 119, 185, 758, 974 |
| BstNI | CCWGG | 3 cut(s) | 589, 715, 811 |
| BstNSI | RCATGY | 1 cut(s) | 975 |
| BstSCI | CCNGG | 3 cut(s) | 587, 713, 809 |
| BstSFI | CTRYAG | 2 cut(s) | 548, 695 |
| BstSLI | GKGCMC | 2 cut(s) | 979, 1453 |
| BstUI | CGCG | 1 cut(s) | 83 |
| BstV1I | GCAGC | 3 cut(s) | 105, 980, 1237 |
| BstX2I | RGATCY | 4 cut(s) | 880, 946, 1145, 1378 |
| BstYI | RGATCY | 4 cut(s) | 880, 946, 1145, 1378 |
| BsuRI | GGCC | 4 cut(s) | 62, 176, 542, 1173 |
| BtsCI | GGATG | 3 cut(s) | 454, 543, 1288 |
| BtsI | GCAGTG | 1 cut(s) | 1256 |
| BtsIMutI | CAGTG | 3 cut(s) | 977, 1256, 1336 |
| Cac8I | GCNNGC | 2 cut(s) | 670, 1248 |
| CseI | GACGC | 1 cut(s) | 1370 |
| Csp6I | GTAC | 6 cut(s) | 366, 429, 563, 824, 1106, 1125 |
| CviAII | CATG | 3 cut(s) | 221, 972, 1234 |
| CviQI | GTAC | 6 cut(s) | 366, 429, 563, 824, 1106, 1125 |
| DdeI | CTNAG | 3 cut(s) | 261, 291, 756 |
| DpnI | GATC | 4 cut(s) | 882, 948, 1147, 1380 |
| DpnII | GATC | 4 cut(s) | 880, 946, 1145, 1378 |
| DraI | TTTAAA | 1 cut(s) | 739 |
| Eam1104I | CTCTTC | 2 cut(s) | 23, 657 |
| EarI | CTCTTC | 2 cut(s) | 23, 657 |
| EciI | GGCGGA | 2 cut(s) | 23, 100 |
| Eco32I | GATATC | 1 cut(s) | 142 |
| Eco57I | CTGAAG | 3 cut(s) | 681, 918, 1062 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 551 |
| EcoRII | CCWGG | 3 cut(s) | 587, 713, 809 |
| EcoRV | GATATC | 1 cut(s) | 142 |
| FaeI | CATG | 3 cut(s) | 224, 975, 1237 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1056, 1088 |
| FaqI | GGGAC | 1 cut(s) | 59 |
| FatI | CATG | 3 cut(s) | 220, 971, 1233 |
| FauI | CCCGC | 1 cut(s) | 501 |
| FblI | GTMKAC | 2 cut(s) | 628, 1163 |
| Fnu4HI | GCNGC | 8 cut(s) | 94, 114, 117, 120, 177, 969, 1202, 1251 |
| FokI | GGATG | 3 cut(s) | 461, 530, 1275 |
| Fsp4HI | GCNGC | 8 cut(s) | 94, 114, 117, 120, 177, 969, 1202, 1251 |
| FspBI | CTAG | 6 cut(s) | 632, 774, 858, 863, 1382, 1479 |
| GluI | GCNGC | 8 cut(s) | 94, 114, 117, 120, 177, 969, 1202, 1251 |
| GsaI | CCCAGC | 1 cut(s) | 1246 |
| HaeIII | GGCC | 4 cut(s) | 62, 176, 542, 1173 |
| HapII | CCGG | 3 cut(s) | 153, 1149, 1459 |
| HgaI | GACGC | 1 cut(s) | 1370 |
| Hin1I | GRCGYC | 1 cut(s) | 1362 |
| Hin1II | CATG | 3 cut(s) | 224, 975, 1237 |
| HincII | GTYRAC | 2 cut(s) | 629, 1507 |
| HindII | GTYRAC | 2 cut(s) | 629, 1507 |
| HindIII | AAGCTT | 2 cut(s) | 670, 1178 |
| HpaI | GTTAAC | 1 cut(s) | 1507 |
| HpaII | CCGG | 3 cut(s) | 153, 1149, 1459 |
| HphI | GGTGA | 3 cut(s) | 1036, 1163, 1302 |
| Hpy166II | GTNNAC | 7 cut(s) | 629, 648, 977, 1027, 1164, 1451, 1507 |
| Hpy188I | TCNGA | 8 cut(s) | 136, 172, 213, 262, 661, 937, 951, 1192 |
| Hpy188III | TCNNGA | 7 cut(s) | 145, 863, 884, 1143, 1292, 1376, 1382 |
| Hpy8I | GTNNAC | 7 cut(s) | 629, 648, 977, 1027, 1164, 1451, 1507 |
| Hpy99I | CGWCG | 2 cut(s) | 71, 83 |
| HpyAV | CCTTC | 4 cut(s) | 419, 547, 911, 1086 |
| HpyCH4III | ACNGT | 1 cut(s) | 1102 |
| HpyCH4IV | ACGT | 3 cut(s) | 241, 482, 940 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 119, 185, 758, 974 |
| HpyF3I | CTNAG | 3 cut(s) | 261, 291, 756 |
| HpySE526I | ACGT | 3 cut(s) | 241, 482, 940 |
| Hsp92I | GRCGYC | 1 cut(s) | 1362 |
| Hsp92II | CATG | 3 cut(s) | 224, 975, 1237 |
| KpnI | GGTACC | 1 cut(s) | 1128 |
| KspAI | GTTAAC | 1 cut(s) | 1507 |
| Kzo9I | GATC | 4 cut(s) | 880, 946, 1145, 1378 |
| LmnI | GCTCC | 2 cut(s) | 802, 1441 |
| Lsp1109I | GCAGC | 3 cut(s) | 105, 980, 1237 |
| LweI | GCATC | 4 cut(s) | 193, 448, 1297, 1423 |
| MaeI | CTAG | 6 cut(s) | 632, 774, 858, 863, 1382, 1479 |
| MaeII | ACGT | 3 cut(s) | 241, 482, 940 |
| MaeIII | GTNAC | 2 cut(s) | 352, 1229 |
| MalI | GATC | 4 cut(s) | 882, 948, 1147, 1380 |
| MbiI | CCGCTC | 1 cut(s) | 1204 |
| MboI | GATC | 4 cut(s) | 880, 946, 1145, 1378 |
| MflI | RGATCY | 4 cut(s) | 880, 946, 1145, 1378 |
| MhlI | GDGCHC | 2 cut(s) | 979, 1453 |
| MmeI | TCCRAC | 3 cut(s) | 276, 591, 774 |
| MseI | TTAA | 8 cut(s) | 309, 372, 687, 738, 876, 992, 1092, 1506 |
| MslI | CAYNNNNRTG | 2 cut(s) | 225, 1224 |
| MspA1I | CMGCKG | 3 cut(s) | 179, 841, 1491 |
| MspI | CCGG | 3 cut(s) | 153, 1149, 1459 |
| MspR9I | CCNGG | 3 cut(s) | 589, 715, 811 |
| Mva1269I | GAATGC | 1 cut(s) | 1009 |
| MvaI | CCWGG | 3 cut(s) | 589, 715, 811 |
| MvnI | CGCG | 1 cut(s) | 83 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 119, 185, 758, 974 |
| NdeII | GATC | 4 cut(s) | 880, 946, 1145, 1378 |
| NlaIII | CATG | 3 cut(s) | 224, 975, 1237 |
| NlaIV | GGNNCC | 2 cut(s) | 232, 1126 |
| NspI | RCATGY | 1 cut(s) | 975 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PctI | GAATGC | 1 cut(s) | 1009 |
| PflFI | GACNNNGTC | 1 cut(s) | 71 |
| PfoI | TCCNGGA | 1 cut(s) | 809 |
| PkrI | GCNGC | 8 cut(s) | 95, 115, 118, 121, 178, 970, 1203, 1252 |
| PshBI | ATTAAT | 1 cut(s) | 992 |
| Psp1406I | AACGTT | 1 cut(s) | 241 |
| Psp6I | CCWGG | 3 cut(s) | 587, 713, 809 |
| PspFI | CCCAGC | 1 cut(s) | 1242 |
| PspGI | CCWGG | 3 cut(s) | 587, 713, 809 |
| PspN4I | GGNNCC | 2 cut(s) | 232, 1126 |
| PsuI | RGATCY | 4 cut(s) | 880, 946, 1145, 1378 |
| PsyI | GACNNNGTC | 1 cut(s) | 71 |
| PvuII | CAGCTG | 1 cut(s) | 841 |
| RsaI | GTAC | 6 cut(s) | 367, 430, 564, 825, 1107, 1126 |
| RsaNI | GTAC | 6 cut(s) | 366, 429, 563, 824, 1106, 1125 |
| RseI | CAYNNNNRTG | 2 cut(s) | 225, 1224 |
| SalI | GTCGAC | 1 cut(s) | 627 |
| SaqAI | TTAA | 8 cut(s) | 309, 372, 687, 738, 876, 992, 1092, 1506 |
| SatI | GCNGC | 8 cut(s) | 94, 114, 117, 120, 177, 969, 1202, 1251 |
| Sau3AI | GATC | 4 cut(s) | 880, 946, 1145, 1378 |
| ScrFI | CCNGG | 3 cut(s) | 589, 715, 811 |
| SduI | GDGCHC | 2 cut(s) | 979, 1453 |
| SfaNI | GCATC | 4 cut(s) | 193, 448, 1297, 1423 |
| SfcI | CTRYAG | 2 cut(s) | 548, 695 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 225, 1224 |
| SmlI | CTYRAG | 1 cut(s) | 884 |
| SmoI | CTYRAG | 1 cut(s) | 884 |
| SpeI | ACTAGT | 1 cut(s) | 631 |
| SspI | AATATT | 1 cut(s) | 769 |
| SspMI | CTAG | 6 cut(s) | 632, 774, 858, 863, 1382, 1479 |
| StyD4I | CCNGG | 3 cut(s) | 587, 713, 809 |
| TaaI | ACNGT | 1 cut(s) | 1102 |
| TaiI | ACGT | 3 cut(s) | 244, 485, 943 |
| TaqI | TCGA | 1 cut(s) | 628 |
| TatI | WGTACW | 2 cut(s) | 562, 823 |
| TauI | GCSGC | 5 cut(s) | 116, 119, 122, 179, 1204 |
| Tru1I | TTAA | 8 cut(s) | 309, 372, 687, 738, 876, 992, 1092, 1506 |
| Tru9I | TTAA | 8 cut(s) | 309, 372, 687, 738, 876, 992, 1092, 1506 |
| TscAI | CASTG | 3 cut(s) | 984, 1263, 1336 |
| TseI | GCWGC | 3 cut(s) | 93, 968, 1250 |
| TspDTI | ATGAA | 8 cut(s) | 93, 402, 465, 521, 723, 1176, 1338, 1383 |
| TspGWI | ACGGA | 1 cut(s) | 586 |
| TspRI | CASTG | 3 cut(s) | 984, 1263, 1336 |
| Tth111I | GACNNNGTC | 1 cut(s) | 71 |
| VneI | GTGCAC | 2 cut(s) | 975, 1449 |
| VspI | ATTAAT | 1 cut(s) | 992 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 551 |
| XapI | RAATTY | 3 cut(s) | 850, 1306, 1350 |
| XbaI | TCTAGA | 2 cut(s) | 862, 1381 |
| XceI | RCATGY | 1 cut(s) | 975 |
| XmiI | GTMKAC | 2 cut(s) | 628, 1163 |
| XspI | CTAG | 6 cut(s) | 632, 774, 858, 863, 1382, 1479 |