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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38580 AT2G38580 AT2G38580 |
| fragaria_vesca | FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 FvH4_6g09531 |
| malus_domestica | MD12G1191100.v1.1 |
| prunus_persica | Prupe.6G296200_v2.0.a1 Prupe.6G296200_v2.0.a1 |
| pyrus_communis | pycom04g15590 pycom12g17830 |
| rosa_chinensis | RchiOBHm_Chr3g0460131 |
| rosa_laevigata | RLG00000025041 |
| rosa_multiflora | Rmu_sc0000449.1_g000051 Rmu_sc0010911.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00419810 |
| rosa_rugosa | Rorug03G0040200 Rorug03G0040300 Rorug03G0040400 |
| rosa_samantha | Rh3AG098200 Rh3BG101300 Rh3CG103400 Rh3DG102600 Rh5BG300100 Rh5DG309000 Rh7DG221400 |
| rosa_wichuraiana | Rw3G008290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1130 |
| AccB1I | GGYRCC | 2 cut(s) | 236, 1130 |
| AccBSI | CCGCTC | 1 cut(s) | 1210 |
| AccI | GTMKAC | 2 cut(s) | 634, 1169 |
| AccII | CGCG | 1 cut(s) | 83 |
| AclI | AACGTT | 1 cut(s) | 247 |
| AclWI | GGATC | 3 cut(s) | 894, 1146, 1392 |
| AcsI | RAATTY | 3 cut(s) | 856, 1312, 1356 |
| AcuI | CTGAAG | 2 cut(s) | 687, 924 |
| AcyI | GRCGYC | 1 cut(s) | 1368 |
| AfaI | GTAC | 5 cut(s) | 373, 436, 570, 831, 1132 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 82, 559, 1451 |
| AhlI | ACTAGT | 1 cut(s) | 637 |
| AjnI | CCWGG | 3 cut(s) | 593, 719, 815 |
| AluBI | AGCT | 5 cut(s) | 260, 678, 847, 1186, 1424 |
| AluI | AGCT | 5 cut(s) | 260, 678, 847, 1186, 1424 |
| Alw21I | GWGCWC | 2 cut(s) | 985, 1459 |
| Alw26I | GTCTC | 1 cut(s) | 1432 |
| Alw44I | GTGCAC | 2 cut(s) | 981, 1455 |
| AlwI | GGATC | 3 cut(s) | 894, 1146, 1392 |
| AoxI | GGCC | 4 cut(s) | 60, 180, 546, 1177 |
| ApaLI | GTGCAC | 2 cut(s) | 981, 1455 |
| ApeKI | GCWGC | 3 cut(s) | 93, 974, 1256 |
| ApoI | RAATTY | 3 cut(s) | 856, 1312, 1356 |
| AseI | ATTAAT | 1 cut(s) | 998 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1305 |
| Asp718I | GGTACC | 1 cut(s) | 1130 |
| AspS9I | GGNCC | 1 cut(s) | 61 |
| AsuHPI | GGTGA | 2 cut(s) | 1042, 1169 |
| BaeGI | GKGCMC | 2 cut(s) | 985, 1459 |
| BanI | GGYRCC | 2 cut(s) | 236, 1130 |
| Bbv12I | GWGCWC | 2 cut(s) | 985, 1459 |
| BbvI | GCAGC | 3 cut(s) | 105, 986, 1243 |
| BccI | CCATC | 4 cut(s) | 557, 844, 1067, 1142 |
| BceAI | ACGGC | 1 cut(s) | 1073 |
| BciT130I | CCWGG | 3 cut(s) | 595, 721, 817 |
| BclI | TGATCA | 1 cut(s) | 312 |
| BcoDI | GTCTC | 1 cut(s) | 1432 |
| BcuI | ACTAGT | 1 cut(s) | 637 |
| BfaI | CTAG | 6 cut(s) | 638, 780, 864, 869, 1388, 1485 |
| BfmI | CTRYAG | 2 cut(s) | 554, 701 |
| BglII | AGATCT | 1 cut(s) | 952 |
| Bme1390I | CCNGG | 3 cut(s) | 595, 721, 817 |
| BmgT120I | GGNCC | 1 cut(s) | 61 |
| BmiI | GGNNCC | 3 cut(s) | 63, 238, 1132 |
| BmrFI | CCNGG | 3 cut(s) | 595, 721, 817 |
| BmsI | GCATC | 4 cut(s) | 199, 454, 1303, 1429 |
| BpuEI | CTTGAG | 1 cut(s) | 911 |
| BsaBI | GATNNNNATC | 1 cut(s) | 213 |
| BsaHI | GRCGYC | 1 cut(s) | 1368 |
| BsaWI | WCCGGW | 2 cut(s) | 1154, 1464 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 599, 629, 1426, 1456 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 82, 559, 1451 |
| Bse1I | ACTGG | 3 cut(s) | 990, 1115, 1335 |
| Bse3DI | GCAATG | 1 cut(s) | 169 |
| Bse8I | GATNNNNATC | 1 cut(s) | 213 |
| BseBI | CCWGG | 3 cut(s) | 595, 721, 817 |
| BseGI | GGATG | 3 cut(s) | 460, 549, 1294 |
| BseJI | GATNNNNATC | 1 cut(s) | 213 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 82, 559, 1451 |
| BseMI | GCAATG | 1 cut(s) | 169 |
| BseMII | CTCAG | 3 cut(s) | 258, 288, 776 |
| BseNI | ACTGG | 3 cut(s) | 990, 1115, 1335 |
| BseRI | GAGGAG | 2 cut(s) | 635, 1232 |
| BseSI | GKGCMC | 2 cut(s) | 985, 1459 |
| BseXI | GCAGC | 3 cut(s) | 105, 986, 1243 |
| BseYI | CCCAGC | 1 cut(s) | 1248 |
| BsgI | GTGCAG | 1 cut(s) | 1521 |
| Bsh1236I | CGCG | 1 cut(s) | 83 |
| BshFI | GGCC | 4 cut(s) | 62, 182, 548, 1179 |
| BshNI | GGYRCC | 2 cut(s) | 236, 1130 |
| BsiHKAI | GWGCWC | 2 cut(s) | 985, 1459 |
| BsiSI | CCGG | 3 cut(s) | 159, 1155, 1465 |
| BslFI | GGGAC | 1 cut(s) | 59 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 82, 559, 1451 |
| BsmAI | GTCTC | 1 cut(s) | 1432 |
| BsmFI | GGGAC | 1 cut(s) | 59 |
| BsmI | GAATGC | 1 cut(s) | 1015 |
| BsnI | GGCC | 4 cut(s) | 62, 182, 548, 1179 |
| Bsp1286I | GDGCHC | 2 cut(s) | 985, 1459 |
| Bsp1407I | TGTACA | 2 cut(s) | 568, 829 |
| Bsp143I | GATC | 5 cut(s) | 312, 886, 952, 1151, 1384 |
| BspANI | GGCC | 4 cut(s) | 62, 182, 548, 1179 |
| BspCNI | CTCAG | 3 cut(s) | 259, 289, 775 |
| BspFNI | CGCG | 1 cut(s) | 83 |
| BspLI | GGNNCC | 3 cut(s) | 63, 238, 1132 |
| BspPI | GGATC | 3 cut(s) | 894, 1146, 1392 |
| BspT107I | GGYRCC | 2 cut(s) | 236, 1130 |
| BsrBI | CCGCTC | 1 cut(s) | 1210 |
| BsrDI | GCAATG | 1 cut(s) | 169 |
| BsrGI | TGTACA | 2 cut(s) | 568, 829 |
| BsrI | ACTGG | 3 cut(s) | 990, 1115, 1335 |
| BssMI | GATC | 5 cut(s) | 312, 886, 952, 1151, 1384 |
| BssNI | GRCGYC | 1 cut(s) | 1368 |
| Bst2UI | CCWGG | 3 cut(s) | 595, 721, 817 |
| Bst4CI | ACNGT | 1 cut(s) | 1108 |
| Bst6I | CTCTTC | 2 cut(s) | 23, 663 |
| BstACI | GRCGYC | 1 cut(s) | 1368 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 980 |
| BstAUI | TGTACA | 2 cut(s) | 568, 829 |
| BstC8I | GCNNGC | 2 cut(s) | 676, 1254 |
| BstDEI | CTNAG | 3 cut(s) | 267, 297, 762 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 557 |
| BstF5I | GGATG | 3 cut(s) | 460, 549, 1294 |
| BstFNI | CGCG | 1 cut(s) | 83 |
| BstKTI | GATC | 5 cut(s) | 315, 889, 955, 1154, 1387 |
| BstMAI | GTCTC | 1 cut(s) | 1432 |
| BstMBI | GATC | 5 cut(s) | 312, 886, 952, 1151, 1384 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 119, 122, 125, 191, 980 |
| BstNI | CCWGG | 3 cut(s) | 595, 721, 817 |
| BstNSI | RCATGY | 1 cut(s) | 981 |
| BstSCI | CCNGG | 3 cut(s) | 593, 719, 815 |
| BstSFI | CTRYAG | 2 cut(s) | 554, 701 |
| BstSLI | GKGCMC | 2 cut(s) | 985, 1459 |
| BstUI | CGCG | 1 cut(s) | 83 |
| BstV1I | GCAGC | 3 cut(s) | 105, 986, 1243 |
| BstX2I | RGATCY | 4 cut(s) | 886, 952, 1151, 1384 |
| BstYI | RGATCY | 4 cut(s) | 886, 952, 1151, 1384 |
| BsuRI | GGCC | 4 cut(s) | 62, 182, 548, 1179 |
| BtsCI | GGATG | 3 cut(s) | 460, 549, 1294 |
| BtsI | GCAGTG | 1 cut(s) | 1262 |
| BtsIMutI | CAGTG | 3 cut(s) | 983, 1262, 1342 |
| Cac8I | GCNNGC | 2 cut(s) | 676, 1254 |
| Cfr13I | GGNCC | 1 cut(s) | 61 |
| CseI | GACGC | 1 cut(s) | 1376 |
| Csp6I | GTAC | 5 cut(s) | 372, 435, 569, 830, 1131 |
| CviAII | CATG | 4 cut(s) | 227, 978, 1144, 1240 |
| CviQI | GTAC | 5 cut(s) | 372, 435, 569, 830, 1131 |
| DdeI | CTNAG | 3 cut(s) | 267, 297, 762 |
| DpnI | GATC | 5 cut(s) | 314, 888, 954, 1153, 1386 |
| DpnII | GATC | 5 cut(s) | 312, 886, 952, 1151, 1384 |
| DraI | TTTAAA | 1 cut(s) | 745 |
| Eam1104I | CTCTTC | 2 cut(s) | 23, 663 |
| EarI | CTCTTC | 2 cut(s) | 23, 663 |
| EciI | GGCGGA | 2 cut(s) | 23, 100 |
| Eco57I | CTGAAG | 2 cut(s) | 687, 924 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 557 |
| EcoO109I | RGGNCCY | 1 cut(s) | 61 |
| EcoRII | CCWGG | 3 cut(s) | 593, 719, 815 |
| FaeI | CATG | 4 cut(s) | 230, 981, 1147, 1243 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1062, 1094 |
| FaqI | GGGAC | 1 cut(s) | 59 |
| FatI | CATG | 4 cut(s) | 226, 977, 1143, 1239 |
| FauNDI | CATATG | 1 cut(s) | 471 |
| FbaI | TGATCA | 1 cut(s) | 312 |
| FblI | GTMKAC | 2 cut(s) | 634, 1169 |
| FokI | GGATG | 3 cut(s) | 467, 536, 1281 |
| FspBI | CTAG | 6 cut(s) | 638, 780, 864, 869, 1388, 1485 |
| GsaI | CCCAGC | 1 cut(s) | 1252 |
| HaeIII | GGCC | 4 cut(s) | 62, 182, 548, 1179 |
| HapII | CCGG | 3 cut(s) | 159, 1155, 1465 |
| HgaI | GACGC | 1 cut(s) | 1376 |
| Hin1I | GRCGYC | 1 cut(s) | 1368 |
| Hin1II | CATG | 4 cut(s) | 230, 981, 1147, 1243 |
| HincII | GTYRAC | 2 cut(s) | 635, 1513 |
| HindII | GTYRAC | 2 cut(s) | 635, 1513 |
| HindIII | AAGCTT | 2 cut(s) | 676, 1184 |
| HpaI | GTTAAC | 1 cut(s) | 1513 |
| HpaII | CCGG | 3 cut(s) | 159, 1155, 1465 |
| HphI | GGTGA | 2 cut(s) | 1042, 1169 |
| Hpy166II | GTNNAC | 7 cut(s) | 410, 635, 654, 983, 1170, 1457, 1513 |
| Hpy188I | TCNGA | 9 cut(s) | 142, 178, 219, 268, 667, 765, 943, 957, 1198 |
| Hpy188III | TCNNGA | 7 cut(s) | 151, 869, 890, 1149, 1298, 1382, 1388 |
| Hpy8I | GTNNAC | 7 cut(s) | 410, 635, 654, 983, 1170, 1457, 1513 |
| Hpy99I | CGWCG | 2 cut(s) | 71, 83 |
| HpyAV | CCTTC | 4 cut(s) | 425, 553, 917, 1092 |
| HpyCH4III | ACNGT | 1 cut(s) | 1108 |
| HpyCH4IV | ACGT | 4 cut(s) | 247, 425, 488, 946 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 119, 122, 125, 191, 980 |
| HpyF3I | CTNAG | 3 cut(s) | 267, 297, 762 |
| HpySE526I | ACGT | 4 cut(s) | 247, 425, 488, 946 |
| Hsp92I | GRCGYC | 1 cut(s) | 1368 |
| Hsp92II | CATG | 4 cut(s) | 230, 981, 1147, 1243 |
| KpnI | GGTACC | 1 cut(s) | 1134 |
| Ksp22I | TGATCA | 1 cut(s) | 312 |
| KspAI | GTTAAC | 1 cut(s) | 1513 |
| Kzo9I | GATC | 5 cut(s) | 312, 886, 952, 1151, 1384 |
| LmnI | GCTCC | 2 cut(s) | 808, 1447 |
| Lsp1109I | GCAGC | 3 cut(s) | 105, 986, 1243 |
| LweI | GCATC | 4 cut(s) | 199, 454, 1303, 1429 |
| MaeI | CTAG | 6 cut(s) | 638, 780, 864, 869, 1388, 1485 |
| MaeII | ACGT | 4 cut(s) | 247, 425, 488, 946 |
| MaeIII | GTNAC | 1 cut(s) | 1235 |
| MalI | GATC | 5 cut(s) | 314, 888, 954, 1153, 1386 |
| MbiI | CCGCTC | 1 cut(s) | 1210 |
| MboI | GATC | 5 cut(s) | 312, 886, 952, 1151, 1384 |
| MflI | RGATCY | 4 cut(s) | 886, 952, 1151, 1384 |
| MhlI | GDGCHC | 2 cut(s) | 985, 1459 |
| MmeI | TCCRAC | 3 cut(s) | 282, 597, 780 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1305 |
| MseI | TTAA | 8 cut(s) | 378, 693, 744, 882, 998, 1098, 1413, 1512 |
| MslI | CAYNNNNRTG | 2 cut(s) | 231, 1230 |
| MspA1I | CMGCKG | 3 cut(s) | 185, 847, 1497 |
| MspI | CCGG | 3 cut(s) | 159, 1155, 1465 |
| MspR9I | CCNGG | 3 cut(s) | 595, 721, 817 |
| Mva1269I | GAATGC | 1 cut(s) | 1015 |
| MvaI | CCWGG | 3 cut(s) | 595, 721, 817 |
| MvnI | CGCG | 1 cut(s) | 83 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 119, 122, 125, 191, 980 |
| NdeI | CATATG | 1 cut(s) | 471 |
| NdeII | GATC | 5 cut(s) | 312, 886, 952, 1151, 1384 |
| NlaIII | CATG | 4 cut(s) | 230, 981, 1147, 1243 |
| NlaIV | GGNNCC | 3 cut(s) | 63, 238, 1132 |
| NspI | RCATGY | 1 cut(s) | 981 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PctI | GAATGC | 1 cut(s) | 1015 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1305 |
| PflFI | GACNNNGTC | 1 cut(s) | 71 |
| PfoI | TCCNGGA | 1 cut(s) | 815 |
| PshBI | ATTAAT | 1 cut(s) | 998 |
| Psp1406I | AACGTT | 1 cut(s) | 247 |
| Psp6I | CCWGG | 3 cut(s) | 593, 719, 815 |
| PspFI | CCCAGC | 1 cut(s) | 1248 |
| PspGI | CCWGG | 3 cut(s) | 593, 719, 815 |
| PspN4I | GGNNCC | 3 cut(s) | 63, 238, 1132 |
| PspPI | GGNCC | 1 cut(s) | 61 |
| PsuI | RGATCY | 4 cut(s) | 886, 952, 1151, 1384 |
| PsyI | GACNNNGTC | 1 cut(s) | 71 |
| PvuII | CAGCTG | 1 cut(s) | 847 |
| RsaI | GTAC | 5 cut(s) | 373, 436, 570, 831, 1132 |
| RsaNI | GTAC | 5 cut(s) | 372, 435, 569, 830, 1131 |
| RseI | CAYNNNNRTG | 2 cut(s) | 231, 1230 |
| SalI | GTCGAC | 1 cut(s) | 633 |
| SaqAI | TTAA | 8 cut(s) | 378, 693, 744, 882, 998, 1098, 1413, 1512 |
| Sau3AI | GATC | 5 cut(s) | 312, 886, 952, 1151, 1384 |
| Sau96I | GGNCC | 1 cut(s) | 61 |
| ScrFI | CCNGG | 3 cut(s) | 595, 721, 817 |
| SduI | GDGCHC | 2 cut(s) | 985, 1459 |
| SfaNI | GCATC | 4 cut(s) | 199, 454, 1303, 1429 |
| SfcI | CTRYAG | 2 cut(s) | 554, 701 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 231, 1230 |
| SmlI | CTYRAG | 1 cut(s) | 890 |
| SmoI | CTYRAG | 1 cut(s) | 890 |
| SpeI | ACTAGT | 1 cut(s) | 637 |
| SspI | AATATT | 1 cut(s) | 775 |
| SspMI | CTAG | 6 cut(s) | 638, 780, 864, 869, 1388, 1485 |
| StyD4I | CCNGG | 3 cut(s) | 593, 719, 815 |
| TaaI | ACNGT | 1 cut(s) | 1108 |
| TaiI | ACGT | 4 cut(s) | 250, 428, 491, 949 |
| TaqI | TCGA | 1 cut(s) | 634 |
| TatI | WGTACW | 2 cut(s) | 568, 829 |
| TauI | GCSGC | 7 cut(s) | 116, 119, 122, 125, 128, 185, 1210 |
| Tru1I | TTAA | 8 cut(s) | 378, 693, 744, 882, 998, 1098, 1413, 1512 |
| Tru9I | TTAA | 8 cut(s) | 378, 693, 744, 882, 998, 1098, 1413, 1512 |
| TscAI | CASTG | 3 cut(s) | 990, 1269, 1342 |
| TseI | GCWGC | 3 cut(s) | 93, 974, 1256 |
| TspDTI | ATGAA | 8 cut(s) | 93, 408, 471, 527, 729, 1182, 1344, 1389 |
| TspGWI | ACGGA | 1 cut(s) | 592 |
| TspRI | CASTG | 3 cut(s) | 990, 1269, 1342 |
| Tth111I | GACNNNGTC | 1 cut(s) | 71 |
| VneI | GTGCAC | 2 cut(s) | 981, 1455 |
| VspI | ATTAAT | 1 cut(s) | 998 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 557 |
| XapI | RAATTY | 3 cut(s) | 856, 1312, 1356 |
| XbaI | TCTAGA | 2 cut(s) | 868, 1387 |
| XceI | RCATGY | 1 cut(s) | 981 |
| XmiI | GTMKAC | 2 cut(s) | 634, 1169 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1305 |
| XspI | CTAG | 6 cut(s) | 638, 780, 864, 869, 1388, 1485 |