Rorug03G0040400

Belongs to the ubiquitin-conjugating enzyme family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0001474
Physical Location & Seq
Forward (+)
3163910 .. 3173043
9134 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0040400.1

Sequence Viewer

Length: 2115 bp
ATGGCATCAGTTATAGGTTTTGGGGGACCTCACTTTTTTGCATTAAGTTCTGAGAATAAGCCTCGGTTTCGAGTGCAAGTTAGGAGTTTAGGTAATCAGGATGCATCAGTTTTGCCTTCAGACTCGGTTGTAGTGAATGGAGCTTCTGTAGTTGGGGAGAGGGAGGGAAGTAGGCCTTTGGTTGATCAAGGGAATGGGAGTTTGAGGCATAAGGTTAAGGAGAAACAGAGGATAGAAGATGGTGTTCTCGAAAGTTTGGAACCTTTGTGGGATGATGGGTATGGGACTGTGACTGTAAAGGATTATTTCGATGCAACTGAGGAGATGATTAAGCCTGATGGTGGTCCTCCTCGATGGTTTAGCCCCCTTGCGCGCAACCCTCCATTGAAGGATTCTCCAGTTCTTTTGTTTTTGCCTGGGTTAGATGGTACTGGTTGCGGACTCATTTTGCATCATAAAGCTCTTCAGAAGGTCTTTGAAGTTCGATGCTTGCATATTCCAGTTAATGATCGAACACCATTTGAAGGGCTGGTGAAATTGGTGGAAGAAACTATTAGGGTTGAGCATGCTTCATCTCCCAACAAGCCAATTTATTTGGTAGGAGATTCTTTTGGAGGATGCCTATCACTTGCCGTTGCTGCACGTAATCCTACCATTGACCTAGTACTGATACTAGTCAACCCAGCAACATCCATCGAGAGGTCTCAGTTGCTACCTCTGTTCCCAATCTTGGAGGCTATGCCTGAAGAATTACATATCACAGTTCCCTATCTTCTCAGCTTTGTTATGGGTGATCCAATAAAAATGGCGACGGTTAACATAAAAAATAGGCTTCCTCCCGGTTTAAAATTTACGCAAATATCGCAGAACCTCACTGCTTTGCTACCATGTCTCTCTTCTTTGGCCGATATTATACCAAGGGAAACTCTTCTTTGGAAGTTGAAGCTGCTCAGATCAGCTGCTGGTTATGCAAATTCCCGTCTTCATGCTGTTAAAGCTGAAGTACTTGTGTTGGCTAGTGACAAGGATAACATGGTTCCTAGTCGGGATGAAGTGGAACGACTAAGGAACTCATTACAGAACTGTTCAATTCGTCACTTCCCAGACAATGGGCATACCCTGTTACTGGAAGATGGGGTTAATTTGTTGACGGTTATAAAACGTACTCTCAAATATCGCCGTTCGAGGAAGCATGATAGTGTCTCAGATTTCCTTCCTCCTAGTATGACAGAATTCAACTATGCATTTGATGAAACAGTCGGATTGTTACGCTTTGCTGCTGGTTCTGCTTTTTTCTCAACATTGGAAGATGGAACGGTAGTGAGAGGTCTTGCAGGAGTTCCAATTGAAGGACCTGTCTTAATTGTTGGCTATCATAATATAATGGGGCTAGAAATGTATTCTTTAGTTGAAGAATTTTTAAGAGAAAAGAAAATAATGGTTCGTGGTTTAGCACATCCAGAACTGTTGTTGGGGAAGAGCTCAGCTGATTTTGACTTGTTCAACGTATTTGGTGCATTACCTGTTACGGCAAGAAATCTATTCAAAGCGCTTTCATCAAACTCACATGTTCTCTTGTATCCTGGTGGTGCACGTGAAGCTCTCCATTACAAGGGTGAAGAATACAAGTTATTCTGGCCTGATCAACCTGAATTTGTCAGAATGGCTGCACGTTTTGGGGCCACAATTGTACCATTTGCAGCTGTAGGAGAAGATGACTTACTCGAATTGGTTCTCGACTACAATGACATAAAGAAGATCCCTGTGGTGGGCGACTATTTCATCAATGCTAATAATGATGCTATGAAATTGAGGGAGGATACACCTGGAGAAGTTGCCAACCAAGACCTCTTCTTTCCGGGAATTCTGCCCAAGTTACCAGGCCGCTATTACCATTTGTTTGGGAAACCGATAGAAACAAAAGGAAGGGAAGAGATCCTGAAAGACAAAGACAGTGCAAACAAATTGTATTTGGAGATACAATCTGAAATTGAACGAAGTTTAGCATACTTAATCAAGAAGCGAGAGGAGGATCCTTACAGGAATCTTATTGACAGAACAGTATATCGGGCACTATATTCCCGTTTAGATGAAATTCCAACATTTGAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04013 ko04120 ko04141 ko04624 map04013 map04120 map04141 map04624
Pfam Domains
Protein Families
UQ_con

Protein Analysis

704

Amino Acids

78.55

Weight (kDa)

5.97

Isoelectric Point (pI)

48.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 184 - 377 1.1e-09 Serine aminopeptidase, S33
DAGAT PF03982 504 - 578 1.3e-06 Diacylglycerol acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1157
AccB7I CCANNNNNTGG 1 cut(s) 1109
AccII CGCG 1 cut(s) 373
AciI CCGC 2 cut(s) 438, 1885
AclWI GGATC 5 cut(s) 788, 1753, 1930, 2027, 2040
AcoI YGGCCR 1 cut(s) 903
AcsI RAATTY 7 cut(s) 848, 973, 1232, 1415, 1652, 1863, 2094
AcuI CTGAAG 4 cut(s) 102, 449, 765, 1020
AcvI CACGTG 1 cut(s) 1595
AfaI GTAC 5 cut(s) 430, 666, 1005, 1165, 1692
AfeI AGCGCT 1 cut(s) 1551
AflIII ACRYGT 1 cut(s) 1567
AhlI ACTAGT 1 cut(s) 673
AjnI CCWGG 4 cut(s) 415, 1582, 1825, 1879
Alw21I GWGCWC 2 cut(s) 1484, 1594
Alw26I GTCTC 3 cut(s) 708, 896, 1207
Alw44I GTGCAC 1 cut(s) 1590
AlwI GGATC 5 cut(s) 788, 1753, 1930, 2027, 2040
AlwNI CAGNNNCTG 1 cut(s) 962
Aor51HI AGCGCT 1 cut(s) 1551
AoxI GGCC 5 cut(s) 173, 903, 1637, 1680, 1882
ApaLI GTGCAC 1 cut(s) 1590
ApeKI GCWGC 6 cut(s) 638, 946, 959, 1277, 1667, 1700
ApoI RAATTY 7 cut(s) 848, 973, 1232, 1415, 1652, 1863, 2094
Asp700I GAANNNNTTC 2 cut(s) 927, 1731
AspLEI GCGC 3 cut(s) 373, 375, 1552
AspS9I GGNCC 4 cut(s) 26, 344, 1352, 1680
AsuC2I CCSGG 2 cut(s) 840, 1860
AsuHPI GGTGA 3 cut(s) 544, 803, 1628
AvaII GGWCC 3 cut(s) 26, 344, 1352
BaeGI GKGCMC 2 cut(s) 1594, 2074
BaeI ACNNNNGTAYC 2 cut(s) 1674, 1707
BamHI GGATCC 1 cut(s) 2032
BanII GRGCYC 1 cut(s) 1484
BarI GAAGNNNNNNTAC 2 cut(s) 1704, 1736
BbrPI CACGTG 1 cut(s) 1595
BbsI GAAGAC 1 cut(s) 974
Bbv12I GWGCWC 2 cut(s) 1484, 1594
BbvI GCAGC 6 cut(s) 625, 933, 946, 1264, 1654, 1712
BccI CCATC 8 cut(s) 233, 269, 332, 348, 419, 701, 1127, 1304
BceAI ACGGC 3 cut(s) 617, 1164, 1545
BciT130I CCWGG 4 cut(s) 417, 1584, 1827, 1881
BciVI GTATCC 2 cut(s) 1590, 1813
BclI TGATCA 2 cut(s) 184, 1642
BcnI CCSGG 2 cut(s) 840, 1860
BcoDI GTCTC 3 cut(s) 708, 896, 1207
BcuI ACTAGT 1 cut(s) 673
BfaI CTAG 6 cut(s) 662, 674, 1017, 1041, 1221, 1391
BfmI CTRYAG 2 cut(s) 147, 1704
BfoI RGCGCY 1 cut(s) 1553
BfuI GTATCC 2 cut(s) 1590, 1813
BisI GCNGC 7 cut(s) 639, 947, 960, 1278, 1668, 1701, 1885
BlpI GCTNAGC 1 cut(s) 1483
BlsI GCNGC 7 cut(s) 640, 948, 961, 1279, 1669, 1702, 1886
BmcAI AGTACT 2 cut(s) 666, 1005
Bme1390I CCNGG 6 cut(s) 417, 840, 1584, 1827, 1860, 1881
Bme18I GGWCC 3 cut(s) 26, 344, 1352
BmgT120I GGNCC 4 cut(s) 26, 344, 1352, 1680
BmiI GGNNCC 5 cut(s) 27, 261, 1038, 1681, 2034
BmrFI CCNGG 6 cut(s) 417, 840, 1584, 1827, 1860, 1881
BmsI GCATC 8 cut(s) 14, 91, 113, 301, 460, 476, 608, 1789
BpiI GAAGAC 1 cut(s) 974
BpmI CTGGAG 2 cut(s) 381, 1848
Bpu1102I GCTNAGC 1 cut(s) 1483
BpuMI CCSGG 2 cut(s) 840, 1860
BsaAI YACGTR 2 cut(s) 644, 1595
BsaBI GATNNNNATC 1 cut(s) 622
BsaI GGTCTC 1 cut(s) 708
BsaJI CCNNGG 3 cut(s) 62, 416, 917
BsaXI ACNNNNNCTCC 4 cut(s) 76, 106, 132, 162
Bse1I ACTGG 4 cut(s) 398, 436, 500, 1131
Bse8I GATNNNNATC 1 cut(s) 622
BseBI CCWGG 4 cut(s) 417, 1584, 1827, 1881
BseDI CCNNGG 3 cut(s) 62, 416, 917
BseGI GGATG 6 cut(s) 106, 277, 623, 689, 1054, 1456
BseJI GATNNNNATC 1 cut(s) 622
BseMII CTCAG 7 cut(s) 42, 309, 719, 790, 964, 1218, 1497
BseNI ACTGG 4 cut(s) 398, 436, 500, 1131
BsePI GCGCGC 1 cut(s) 371
BseRI GAGGAG 3 cut(s) 335, 339, 2042
BseSI GKGCMC 2 cut(s) 1594, 2074
BseXI GCAGC 6 cut(s) 625, 933, 946, 1264, 1654, 1712
BseYI CCCAGC 1 cut(s) 682
BsgI GTGCAG 2 cut(s) 624, 1653
Bsh1236I CGCG 1 cut(s) 373
BshFI GGCC 5 cut(s) 175, 905, 1639, 1682, 1884
BsiHKAI GWGCWC 2 cut(s) 1484, 1594
BsiSI CCGG 2 cut(s) 840, 1859
BslFI GGGAC 2 cut(s) 39, 298
BsmAI GTCTC 3 cut(s) 708, 896, 1207
BsmFI GGGAC 2 cut(s) 39, 298
BsnI GGCC 5 cut(s) 175, 905, 1639, 1682, 1884
Bso31I GGTCTC 1 cut(s) 708
Bsp1286I GDGCHC 3 cut(s) 1484, 1594, 2074
Bsp143I GATC 8 cut(s) 184, 508, 793, 953, 1642, 1758, 1935, 2032
Bsp1720I GCTNAGC 1 cut(s) 1483
BspACI CCGC 2 cut(s) 438, 1885
BspANI GGCC 5 cut(s) 175, 905, 1639, 1682, 1884
BspCNI CTCAG 7 cut(s) 43, 310, 718, 789, 963, 1217, 1496
BspFNI CGCG 1 cut(s) 373
BspLI GGNNCC 5 cut(s) 27, 261, 1038, 1681, 2034
BspPI GGATC 5 cut(s) 788, 1753, 1930, 2027, 2040
BspQI GCTCTTC 2 cut(s) 468, 1472
BspTNI GGTCTC 1 cut(s) 708
BsrI ACTGG 4 cut(s) 398, 436, 500, 1131
BssECI CCNNGG 3 cut(s) 62, 416, 917
BssHII GCGCGC 1 cut(s) 371
BssMI GATC 8 cut(s) 184, 508, 793, 953, 1642, 1758, 1935, 2032
BssT1I CCWWGG 1 cut(s) 917
Bst2UI CCWGG 4 cut(s) 417, 1584, 1827, 1881
Bst6I CTCTTC 6 cut(s) 468, 901, 933, 1472, 1856, 1926
BstBAI YACGTR 2 cut(s) 644, 1595
BstC8I GCNNGC 3 cut(s) 373, 491, 567
BstDEI CTNAG 8 cut(s) 51, 318, 705, 776, 950, 1064, 1204, 1483
BstF5I GGATG 6 cut(s) 106, 277, 623, 689, 1054, 1456
BstFNI CGCG 1 cut(s) 373
BstH2I RGCGCY 1 cut(s) 1553
BstHHI GCGC 3 cut(s) 373, 375, 1552
BstKTI GATC 8 cut(s) 187, 511, 796, 956, 1645, 1761, 1938, 2035
BstMAI GTCTC 3 cut(s) 708, 896, 1207
BstMBI GATC 8 cut(s) 184, 508, 793, 953, 1642, 1758, 1935, 2032
BstMWI GCNNNNNNNGC 6 cut(s) 638, 862, 968, 995, 1286, 1598
BstNI CCWGG 4 cut(s) 417, 1584, 1827, 1881
BstNSI RCATGY 2 cut(s) 569, 1571
BstSCI CCNGG 6 cut(s) 415, 838, 1582, 1825, 1858, 1879
BstSFI CTRYAG 2 cut(s) 147, 1704
BstSLI GKGCMC 2 cut(s) 1594, 2074
BstUI CGCG 1 cut(s) 373
BstV1I GCAGC 6 cut(s) 625, 933, 946, 1264, 1654, 1712
BstV2I GAAGAC 1 cut(s) 974
BstX2I RGATCY 3 cut(s) 1758, 1935, 2032
BstXI CCANNNNNNTGG 1 cut(s) 1901
BstYI RGATCY 3 cut(s) 1758, 1935, 2032
BsuI GTATCC 2 cut(s) 1590, 1813
BsuRI GGCC 5 cut(s) 175, 905, 1639, 1682, 1884
BtsCI GGATG 6 cut(s) 106, 277, 623, 689, 1054, 1456
BtsI GCAGTG 1 cut(s) 873
BtsIMutI CAGTG 2 cut(s) 873, 1960
Cac8I GCNNGC 3 cut(s) 373, 491, 567
CaiI CAGNNNCTG 1 cut(s) 962
CfoI GCGC 3 cut(s) 373, 375, 1552
Cfr13I GGNCC 4 cut(s) 26, 344, 1352, 1680
Csp6I GTAC 5 cut(s) 429, 665, 1004, 1164, 1691
CviAII CATG 6 cut(s) 566, 888, 986, 1033, 1193, 1568
CviQI GTAC 5 cut(s) 429, 665, 1004, 1164, 1691
DdeI CTNAG 8 cut(s) 51, 318, 705, 776, 950, 1064, 1204, 1483
DpnI GATC 8 cut(s) 186, 510, 795, 955, 1644, 1760, 1937, 2034
DpnII GATC 8 cut(s) 184, 508, 793, 953, 1642, 1758, 1935, 2032
DraI TTTAAA 1 cut(s) 846
EaeI YGGCCR 1 cut(s) 903
Eam1104I CTCTTC 6 cut(s) 468, 901, 933, 1472, 1856, 1926
EarI CTCTTC 6 cut(s) 468, 901, 933, 1472, 1856, 1926
Ecl136II GAGCTC 1 cut(s) 1482
Eco130I CCWWGG 1 cut(s) 917
Eco147I AGGCCT 1 cut(s) 175
Eco24I GRGCYC 1 cut(s) 1484
Eco31I GGTCTC 1 cut(s) 708
Eco47I GGWCC 3 cut(s) 26, 344, 1352
Eco47III AGCGCT 1 cut(s) 1551
Eco53kI GAGCTC 1 cut(s) 1482
Eco57I CTGAAG 4 cut(s) 102, 449, 765, 1020
Eco72I CACGTG 1 cut(s) 1595
EcoICRI GAGCTC 1 cut(s) 1482
EcoO109I RGGNCCY 2 cut(s) 26, 1352
EcoRI GAATTC 2 cut(s) 1232, 1863
EcoRII CCWGG 4 cut(s) 415, 1582, 1825, 1879
EcoT14I CCWWGG 1 cut(s) 917
EcoT22I ATGCAT 2 cut(s) 106, 1246
EcoT38I GRGCYC 1 cut(s) 1484
ErhI CCWWGG 1 cut(s) 917
FaeI CATG 6 cut(s) 569, 891, 989, 1036, 1196, 1571
FalI AAGNNNNNCTT 2 cut(s) 160, 192
FaqI GGGAC 2 cut(s) 39, 298
FatI CATG 6 cut(s) 565, 887, 985, 1032, 1192, 1567
FbaI TGATCA 2 cut(s) 184, 1642
Fnu4HI GCNGC 7 cut(s) 639, 947, 960, 1278, 1668, 1701, 1885
FokI GGATG 6 cut(s) 113, 284, 630, 676, 1061, 1443
FriOI GRGCYC 1 cut(s) 1484
Fsp4HI GCNGC 7 cut(s) 639, 947, 960, 1278, 1668, 1701, 1885
FspBI CTAG 6 cut(s) 662, 674, 1017, 1041, 1221, 1391
GlaI GCGC 3 cut(s) 372, 374, 1551
GluI GCNGC 7 cut(s) 639, 947, 960, 1278, 1668, 1701, 1885
GsaI CCCAGC 1 cut(s) 686
GsuI CTGGAG 2 cut(s) 381, 1848
HaeII RGCGCY 1 cut(s) 1553
HaeIII GGCC 5 cut(s) 175, 905, 1639, 1682, 1884
HapII CCGG 2 cut(s) 840, 1859
HhaI GCGC 3 cut(s) 373, 375, 1552
Hin1II CATG 6 cut(s) 569, 891, 989, 1036, 1196, 1571
Hin6I GCGC 3 cut(s) 371, 373, 1550
HinP1I GCGC 3 cut(s) 371, 373, 1550
HincII GTYRAC 3 cut(s) 679, 817, 1149
HindII GTYRAC 3 cut(s) 679, 817, 1149
HinfI GANTC 5 cut(s) 122, 392, 441, 605, 2044
HpaI GTTAAC 1 cut(s) 817
HpaII CCGG 2 cut(s) 840, 1859
HphI GGTGA 3 cut(s) 544, 803, 1628
Hpy166II GTNNAC 4 cut(s) 679, 817, 1149, 1592
Hpy188I TCNGA 8 cut(s) 52, 121, 468, 953, 1207, 1262, 1661, 1987
Hpy188III TCNNGA 8 cut(s) 98, 248, 697, 1046, 1460, 1736, 1939, 2017
Hpy8I GTNNAC 4 cut(s) 679, 817, 1149, 1592
Hpy99I CGWCG 1 cut(s) 814
HpyAV CCTTC 7 cut(s) 126, 382, 463, 518, 1223, 1343, 1920
HpyCH4IV ACGT 5 cut(s) 643, 1162, 1506, 1594, 1672
HpyF10VI GCNNNNNNNGC 6 cut(s) 638, 862, 968, 995, 1286, 1598
HpyF3I CTNAG 8 cut(s) 51, 318, 705, 776, 950, 1064, 1204, 1483
HpySE526I ACGT 5 cut(s) 643, 1162, 1506, 1594, 1672
Hsp92II CATG 6 cut(s) 569, 891, 989, 1036, 1196, 1571
HspAI GCGC 3 cut(s) 371, 373, 1550
Ksp22I TGATCA 2 cut(s) 184, 1642
KspAI GTTAAC 1 cut(s) 817
Kzo9I GATC 8 cut(s) 184, 508, 793, 953, 1642, 1758, 1935, 2032
LguI GCTCTTC 2 cut(s) 468, 1472
LmnI GCTCC 1 cut(s) 140
Lsp1109I GCAGC 6 cut(s) 625, 933, 946, 1264, 1654, 1712
LweI GCATC 8 cut(s) 14, 91, 113, 301, 460, 476, 608, 1789
MaeI CTAG 6 cut(s) 662, 674, 1017, 1041, 1221, 1391
MaeII ACGT 5 cut(s) 643, 1162, 1506, 1594, 1672
MaeIII GTNAC 7 cut(s) 289, 1019, 1094, 1122, 1266, 1525, 1875
MalI GATC 8 cut(s) 186, 510, 795, 955, 1644, 1760, 1937, 2034
MboI GATC 8 cut(s) 184, 508, 793, 953, 1642, 1758, 1935, 2032
MfeI CAATTG 2 cut(s) 1344, 1686
MflI RGATCY 3 cut(s) 1758, 1935, 2032
MhlI GDGCHC 3 cut(s) 1484, 1594, 2074
MlyI GAGTC 2 cut(s) 116, 435
MmeI TCCRAC 1 cut(s) 1240
Mph1103I ATGCAT 2 cut(s) 106, 1246
MroXI GAANNNNTTC 2 cut(s) 927, 1731
MslI CAYNNNNRTG 1 cut(s) 1197
MspA1I CMGCKG 3 cut(s) 959, 1487, 1703
MspI CCGG 2 cut(s) 840, 1859
MspR9I CCNGG 6 cut(s) 417, 840, 1584, 1827, 1860, 1881
MunI CAATTG 2 cut(s) 1344, 1686
MvaI CCWGG 4 cut(s) 417, 1584, 1827, 1881
MvnI CGCG 1 cut(s) 373
MwoI GCNNNNNNNGC 6 cut(s) 638, 862, 968, 995, 1286, 1598
NciI CCSGG 2 cut(s) 840, 1860
NdeII GATC 8 cut(s) 184, 508, 793, 953, 1642, 1758, 1935, 2032
NlaIII CATG 6 cut(s) 569, 891, 989, 1036, 1196, 1571
NlaIV GGNNCC 5 cut(s) 27, 261, 1038, 1681, 2034
NmuCI GTSAC 3 cut(s) 289, 1019, 1094
NsiI ATGCAT 2 cut(s) 106, 1246
NspI RCATGY 2 cut(s) 569, 1571
PaeI GCATGC 1 cut(s) 569
PauI GCGCGC 1 cut(s) 371
PceI AGGCCT 1 cut(s) 175
PciI ACATGT 1 cut(s) 1567
PciSI GCTCTTC 2 cut(s) 468, 1472
PdmI GAANNNNTTC 2 cut(s) 927, 1731
PfeI GAWTC 3 cut(s) 392, 605, 2044
PflMI CCANNNNNTGG 1 cut(s) 1109
PfoI TCCNGGA 1 cut(s) 1858
PkrI GCNGC 7 cut(s) 640, 948, 961, 1279, 1669, 1702, 1886
PleI GAGTC 2 cut(s) 116, 435
PmaCI CACGTG 1 cut(s) 1595
PmlI CACGTG 1 cut(s) 1595
PpsI GAGTC 2 cut(s) 116, 435
Ppu21I YACGTR 2 cut(s) 644, 1595
PpuMI RGGWCCY 2 cut(s) 26, 1352
PscI ACATGT 1 cut(s) 1567
PsiI TTATAA 1 cut(s) 1157
Psp124BI GAGCTC 1 cut(s) 1484
Psp5II RGGWCCY 2 cut(s) 26, 1352
Psp6I CCWGG 4 cut(s) 415, 1582, 1825, 1879
PspCI CACGTG 1 cut(s) 1595
PspFI CCCAGC 1 cut(s) 682
PspGI CCWGG 4 cut(s) 415, 1582, 1825, 1879
PspN4I GGNNCC 5 cut(s) 27, 261, 1038, 1681, 2034
PspPI GGNCC 4 cut(s) 26, 344, 1352, 1680
PspPPI RGGWCCY 2 cut(s) 26, 1352
PstNI CAGNNNCTG 1 cut(s) 962
PsuI RGATCY 3 cut(s) 1758, 1935, 2032
PteI GCGCGC 1 cut(s) 371
PvuII CAGCTG 3 cut(s) 959, 1487, 1703
RsaI GTAC 5 cut(s) 430, 666, 1005, 1165, 1692
RsaNI GTAC 5 cut(s) 429, 665, 1004, 1164, 1691
RseI CAYNNNNRTG 1 cut(s) 1197
SacI GAGCTC 1 cut(s) 1484
SapI GCTCTTC 2 cut(s) 468, 1472
SatI GCNGC 7 cut(s) 639, 947, 960, 1278, 1668, 1701, 1885
Sau3AI GATC 8 cut(s) 184, 508, 793, 953, 1642, 1758, 1935, 2032
Sau96I GGNCC 4 cut(s) 26, 344, 1352, 1680
ScaI AGTACT 2 cut(s) 666, 1005
SchI GAGTC 2 cut(s) 116, 435
ScrFI CCNGG 6 cut(s) 417, 840, 1584, 1827, 1860, 1881
SduI GDGCHC 3 cut(s) 1484, 1594, 2074
SfaNI GCATC 8 cut(s) 14, 91, 113, 301, 460, 476, 608, 1789
SfcI CTRYAG 2 cut(s) 147, 1704
SinI GGWCC 3 cut(s) 26, 344, 1352
SmiMI CAYNNNNRTG 1 cut(s) 1197
SpeI ACTAGT 1 cut(s) 673
SphI GCATGC 1 cut(s) 569
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 2 cut(s) 438, 1885
SspMI CTAG 6 cut(s) 662, 674, 1017, 1041, 1221, 1391
SstI GAGCTC 1 cut(s) 1484
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 6 cut(s) 415, 838, 1582, 1825, 1858, 1879
StyI CCWWGG 1 cut(s) 917
TaiI ACGT 5 cut(s) 646, 1165, 1509, 1597, 1675
TatI WGTACW 2 cut(s) 664, 1003
TauI GCSGC 1 cut(s) 1887
TfiI GAWTC 3 cut(s) 392, 605, 2044
TscAI CASTG 2 cut(s) 880, 1960
TseFI GTSAC 3 cut(s) 289, 1019, 1094
TseI GCWGC 6 cut(s) 638, 946, 959, 1277, 1667, 1700
Tsp45I GTSAC 3 cut(s) 289, 1019, 1094
TspDTI ATGAA 8 cut(s) 561, 974, 1065, 1266, 1545, 1771, 1820, 2106
TspRI CASTG 2 cut(s) 880, 1960
Van91I CCANNNNNTGG 1 cut(s) 1109
VneI GTGCAC 1 cut(s) 1590
VpaK11BI GGWCC 3 cut(s) 26, 344, 1352
XapI RAATTY 7 cut(s) 848, 973, 1232, 1415, 1652, 1863, 2094
XceI RCATGY 2 cut(s) 569, 1571
XmnI GAANNNNTTC 2 cut(s) 927, 1731
XspI CTAG 6 cut(s) 662, 674, 1017, 1041, 1221, 1391
ZrmI AGTACT 2 cut(s) 666, 1005
Zsp2I ATGCAT 2 cut(s) 106, 1246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.