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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G25240 |
| fragaria_vesca | FvH4_1g01721 FvH4_4g18840 FvH4_4g19061 |
| malus_domestica | MD13G1160500.v1.1 MD13G1160800.v1.1 |
| prunus_persica | Prupe.7G254800_v2.0.a1 |
| pyrus_communis | pycom08g13030 pycom08g13040 pycom08g13070 pycom08g13080 pycom08g13100 pycom13g13670 pycom13g13690 |
| rosa_chinensis | RchiOBHm_Chr2g0086671 |
| rosa_laevigata | RLG00000007519 RLG00000015772 |
| rosa_multiflora | Rmu_sc0002376.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00154330 Rroxscaffold_5G00354660 Rroxscaffold_5G00365870 Rroxscaffold_5G00366060 |
| rosa_rugosa | Rorug01G0468300 Rorug04G0193100 |
| rosa_samantha | Rh2AG020300 Rh2BG020200 Rh2CG019800 Rh2DG020700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 180 |
| AciI | CCGC | 1 cut(s) | 93 |
| AfeI | AGCGCT | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 61, 377 |
| AgsI | TTSAA | 2 cut(s) | 163, 365 |
| Alw21I | GWGCWC | 1 cut(s) | 79 |
| Alw26I | GTCTC | 1 cut(s) | 122 |
| Aor51HI | AGCGCT | 1 cut(s) | 301 |
| AoxI | GGCC | 1 cut(s) | 4 |
| ApaI | GGGCCC | 1 cut(s) | 8 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| AspLEI | GCGC | 1 cut(s) | 302 |
| AspS9I | GGNCC | 2 cut(s) | 4, 5 |
| AsuHPI | GGTGA | 1 cut(s) | 235 |
| BaeGI | GKGCMC | 1 cut(s) | 8 |
| BanII | GRGCYC | 1 cut(s) | 8 |
| BbsI | GAAGAC | 1 cut(s) | 420 |
| Bbv12I | GWGCWC | 1 cut(s) | 79 |
| BbvI | GCAGC | 1 cut(s) | 82 |
| BccI | CCATC | 2 cut(s) | 257, 287 |
| BcoDI | GTCTC | 1 cut(s) | 122 |
| BfaI | CTAG | 1 cut(s) | 372 |
| BfoI | RGCGCY | 1 cut(s) | 303 |
| BglII | AGATCT | 1 cut(s) | 127 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 5 |
| BmiI | GGNNCC | 2 cut(s) | 6, 268 |
| BmsI | GCATC | 2 cut(s) | 354, 423 |
| BpiI | GAAGAC | 1 cut(s) | 420 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 117, 149, 381, 413 |
| BpuEI | CTTGAG | 1 cut(s) | 272 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 61, 377 |
| BseGI | GGATG | 2 cut(s) | 337, 388 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 61, 377 |
| BseMII | CTCAG | 3 cut(s) | 310, 412, 420 |
| BseSI | GKGCMC | 1 cut(s) | 8 |
| BseXI | GCAGC | 1 cut(s) | 82 |
| BshFI | GGCC | 1 cut(s) | 6 |
| BsiHKAI | GWGCWC | 1 cut(s) | 79 |
| BsiSI | CCGG | 1 cut(s) | 99 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 61, 377 |
| BsmAI | GTCTC | 1 cut(s) | 122 |
| BsnI | GGCC | 1 cut(s) | 6 |
| Bsp120I | GGGCCC | 1 cut(s) | 4 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 79 |
| Bsp143I | GATC | 2 cut(s) | 40, 127 |
| BspACI | CCGC | 1 cut(s) | 93 |
| BspANI | GGCC | 1 cut(s) | 6 |
| BspCNI | CTCAG | 3 cut(s) | 309, 411, 421 |
| BspLI | GGNNCC | 2 cut(s) | 6, 268 |
| BspQI | GCTCTTC | 1 cut(s) | 38 |
| BssMI | GATC | 2 cut(s) | 40, 127 |
| Bst4CI | ACNGT | 1 cut(s) | 172 |
| Bst6I | CTCTTC | 1 cut(s) | 38 |
| BstC8I | GCNNGC | 1 cut(s) | 19 |
| BstDEI | CTNAG | 5 cut(s) | 56, 113, 296, 398, 429 |
| BstF5I | GGATG | 2 cut(s) | 337, 388 |
| BstH2I | RGCGCY | 1 cut(s) | 303 |
| BstHHI | GCGC | 1 cut(s) | 302 |
| BstKTI | GATC | 2 cut(s) | 43, 130 |
| BstMAI | GTCTC | 1 cut(s) | 122 |
| BstMBI | GATC | 2 cut(s) | 40, 127 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 318 |
| BstNSI | RCATGY | 1 cut(s) | 31 |
| BstSLI | GKGCMC | 1 cut(s) | 8 |
| BstV1I | GCAGC | 1 cut(s) | 82 |
| BstV2I | GAAGAC | 1 cut(s) | 420 |
| BstX2I | RGATCY | 1 cut(s) | 127 |
| BstYI | RGATCY | 1 cut(s) | 127 |
| BsuRI | GGCC | 1 cut(s) | 6 |
| BtsCI | GGATG | 2 cut(s) | 337, 388 |
| BtsI | GCAGTG | 1 cut(s) | 307 |
| BtsIMutI | CAGTG | 1 cut(s) | 307 |
| Cac8I | GCNNGC | 1 cut(s) | 19 |
| CfoI | GCGC | 1 cut(s) | 302 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 5 |
| CviAII | CATG | 2 cut(s) | 28, 422 |
| CviJI | RGCY | 5 cut(s) | 6, 21, 71, 105, 251 |
| CviKI_1 | RGCY | 5 cut(s) | 6, 21, 71, 105, 251 |
| DdeI | CTNAG | 5 cut(s) | 56, 113, 296, 398, 429 |
| DpnI | GATC | 2 cut(s) | 42, 129 |
| DpnII | GATC | 2 cut(s) | 40, 127 |
| Eam1104I | CTCTTC | 1 cut(s) | 38 |
| EarI | CTCTTC | 1 cut(s) | 38 |
| Eco24I | GRGCYC | 1 cut(s) | 8 |
| Eco47III | AGCGCT | 1 cut(s) | 301 |
| EcoO109I | RGGNCCY | 1 cut(s) | 5 |
| EcoT38I | GRGCYC | 1 cut(s) | 8 |
| FaeI | CATG | 2 cut(s) | 31, 425 |
| FaiI | YATR | 5 cut(s) | 29, 122, 224, 409, 423 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 240, 272 |
| FatI | CATG | 2 cut(s) | 27, 421 |
| FblI | GTMKAC | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| FokI | GGATG | 2 cut(s) | 344, 395 |
| FriOI | GRGCYC | 1 cut(s) | 8 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| FspBI | CTAG | 1 cut(s) | 372 |
| GlaI | GCGC | 1 cut(s) | 301 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HaeII | RGCGCY | 1 cut(s) | 303 |
| HaeIII | GGCC | 1 cut(s) | 6 |
| HapII | CCGG | 1 cut(s) | 99 |
| HhaI | GCGC | 1 cut(s) | 302 |
| Hin1II | CATG | 2 cut(s) | 31, 425 |
| Hin6I | GCGC | 1 cut(s) | 300 |
| HinP1I | GCGC | 1 cut(s) | 300 |
| HincII | GTYRAC | 1 cut(s) | 208 |
| HindII | GTYRAC | 1 cut(s) | 208 |
| HinfI | GANTC | 3 cut(s) | 292, 402, 425 |
| HpaII | CCGG | 1 cut(s) | 99 |
| HphI | GGTGA | 1 cut(s) | 235 |
| Hpy166II | GTNNAC | 2 cut(s) | 181, 208 |
| Hpy188I | TCNGA | 3 cut(s) | 146, 401, 430 |
| Hpy188III | TCNNGA | 4 cut(s) | 80, 260, 289, 349 |
| Hpy8I | GTNNAC | 2 cut(s) | 181, 208 |
| HpyAV | CCTTC | 2 cut(s) | 169, 250 |
| HpyCH4III | ACNGT | 1 cut(s) | 172 |
| HpyCH4V | TGCA | 1 cut(s) | 321 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 318 |
| HpyF3I | CTNAG | 5 cut(s) | 56, 113, 296, 398, 429 |
| Hsp92II | CATG | 2 cut(s) | 31, 425 |
| HspAI | GCGC | 1 cut(s) | 300 |
| Kzo9I | GATC | 2 cut(s) | 40, 127 |
| LguI | GCTCTTC | 1 cut(s) | 38 |
| LpnPI | CCDG | 4 cut(s) | 31, 57, 112, 361 |
| Lsp1109I | GCAGC | 1 cut(s) | 82 |
| LweI | GCATC | 2 cut(s) | 354, 423 |
| MaeI | CTAG | 1 cut(s) | 372 |
| MalI | GATC | 2 cut(s) | 42, 129 |
| MboI | GATC | 2 cut(s) | 40, 127 |
| MboII | GAAGA | 4 cut(s) | 25, 122, 248, 425 |
| MflI | RGATCY | 1 cut(s) | 127 |
| MhlI | GDGCHC | 2 cut(s) | 8, 79 |
| MluCI | AATT | 3 cut(s) | 174, 199, 459 |
| MmeI | TCCRAC | 1 cut(s) | 294 |
| MnlI | CCTC | 4 cut(s) | 286, 296, 383, 463 |
| MseI | TTAA | 1 cut(s) | 24 |
| MspA1I | CMGCKG | 1 cut(s) | 95 |
| MspI | CCGG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 318 |
| NdeII | GATC | 2 cut(s) | 40, 127 |
| NlaIII | CATG | 2 cut(s) | 31, 425 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 268 |
| NspI | RCATGY | 1 cut(s) | 31 |
| PciSI | GCTCTTC | 1 cut(s) | 38 |
| PfeI | GAWTC | 3 cut(s) | 292, 402, 425 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 268 |
| PspOMI | GGGCCC | 1 cut(s) | 4 |
| PspPI | GGNCC | 2 cut(s) | 4, 5 |
| PsuI | RGATCY | 1 cut(s) | 127 |
| SapI | GCTCTTC | 1 cut(s) | 38 |
| SaqAI | TTAA | 1 cut(s) | 24 |
| SatI | GCNGC | 1 cut(s) | 96 |
| Sau3AI | GATC | 2 cut(s) | 40, 127 |
| Sau96I | GGNCC | 2 cut(s) | 4, 5 |
| SduI | GDGCHC | 2 cut(s) | 8, 79 |
| SetI | ASST | 3 cut(s) | 213, 278, 373 |
| SfaNI | GCATC | 2 cut(s) | 354, 423 |
| SmlI | CTYRAG | 1 cut(s) | 287 |
| SmoI | CTYRAG | 1 cut(s) | 287 |
| Sse9I | AATT | 3 cut(s) | 174, 199, 459 |
| SsiI | CCGC | 1 cut(s) | 93 |
| SspMI | CTAG | 1 cut(s) | 372 |
| TaaI | ACNGT | 1 cut(s) | 172 |
| TasI | AATT | 3 cut(s) | 174, 199, 459 |
| TfiI | GAWTC | 3 cut(s) | 292, 402, 425 |
| Tru1I | TTAA | 1 cut(s) | 24 |
| Tru9I | TTAA | 1 cut(s) | 24 |
| TscAI | CASTG | 1 cut(s) | 314 |
| TseI | GCWGC | 1 cut(s) | 95 |
| TspGWI | ACGGA | 2 cut(s) | 193, 402 |
| TspRI | CASTG | 1 cut(s) | 314 |
| XceI | RCATGY | 1 cut(s) | 31 |
| XmiI | GTMKAC | 1 cut(s) | 180 |
| XspI | CTAG | 1 cut(s) | 372 |