pycom15g04640

3beta-hydroxysteroid-dehydrogenase decarboxylase isoform

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
2757910 .. 2760427
2518 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1662 bp
ATGGCGTTCCTGCATTATTGTTCGCCACACCACGTTTCTGACCAGAACCTGACACCCGTTTTTCTACCCTTCGCTGTTCTCTGTTTCCTGGCAATTCCAAATCCCGGGAACATTAACTGGTGCTTCCAAAGCATCATTGGGCATATCGACTCCATTGGCTCTCCTTTTTCTTGGCTGTGCTTCACAAGGGCATGCACAATCTTCTTCCGCGGACCAAAGGCAGTAATGCCTATGCTAAACAAATCCTTCACATCAAATAAAAACCAACAAGAAAGAGAAATTCAATCAAAATCCAAAGCAAGTAACCAAAAGGGTGAGTTAATTGGCAAACATACCCATGTTCTATACCTCTTCTCCCAGGCTGACATTCTGAAAGTCTGTCCAATATTATATAGAAAATCATTAAAATTCATGCACAAAATAGAAGGAACTTTGGGAGTCCGAAAAATTGTTATAGTATTTAAATTTCTTCCAATTTCCTGTTTTTGGGAGAAACTGTTGGTACTAGTCTCAGGCTCTGATCTTACACCCTATATTTCAGCCGTGTACGGACTTGATTGGATTGGTCACGGGGTACTCTCATATTCCATTGGACCGGCATTACTCATTCTTTTTATAGTTGCATCAATAAGTTCGATTTTGCCCCACCTTGACCCTTATGATGACATGGTCCTAGAAGCTCTCTCTCGTGGATGCAAATTGAAATCTGATGTTGTCAAAAAGTTCTGTACATCCAAGAAGATTGAAATCGATATAGAATTGCAGTGTTTGATACGATTGTTGTGTCATAAGAAACGAAGAAAGGTCCTATTTGATTTATTTTTTGTAATTACATTGTATGATTTTGTTTATTGCTCTAGTTTCTCGCTATTTTTGACATGTCTTGTAATTTTTAAACTTTTAACTTTACCCGACGTTATATTTAGTTTCTCGCTAGGGTTAATAAAGCACGAGCCCACGGAGGTTGATTTTGGCCATTATGTTTGTGGAACTCATAAGTCAGGATCAGCTTTCAAGCGTAAACGACTAATTCTAACACTCATTTTATTTTTGTTTTATAAGAACACGAGGTTGCCATCACGGAGTCAAGTCAACCGTGAGATTATTTATTCGGTTGCATGTTACATCTCTAAACATAATTTCATATTAGAGTTTATGTCATCAGAAACGACAGCTATTGAGTTTTCAATAAAATGTCCACATTGTTTTATTTTATTTTTTTTTTTTAATTTTTTTTTTTTTTTTTTCAATTGTGGTACCATTTGGCAATTGCGATGCCTTGTGCTTAAGTTCTTATATACAATTTTGTGGTATCCCCCACCAATGCGAAAAGACGGATATATTATCCAAATGCCTAGTGTCAAAAGTAAGTCATTCAGTAAGAGATTCGAACTCACGTATTTGCACATCAAGAAAGTTAATACTAACACGATCGTCTTAGTTGGCTTGATCTCGTTGTCAACACGTGTCACTGGTATCGTCACAATTAAGAGGGTCATTGTACCGTTGGACTACTTGCTTTGTAAAATGAGTATCGATCCATCCGGTGTCCCCATGAATAATGAACAACATTTGCATTTAAGAAAAAAAAATTGTCATGTCATAAATGAAAACTTTGACGTAAATTTACTACGTATAGATGATAAAATAAGAACACTTTAA

Protein Analysis

554

Amino Acids

63.74

Weight (kDa)

9.39

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1059
Acc65I GGTACC 1 cut(s) 1256
AccB1I GGYRCC 1 cut(s) 1256
AccII CGCG 1 cut(s) 210
AciI CCGC 2 cut(s) 208, 210
AclWI GGATC 2 cut(s) 1012, 1532
AcoI YGGCCR 1 cut(s) 973
AcsI RAATTY 4 cut(s) 279, 407, 464, 1624
AcvI CACGTG 1 cut(s) 1466
AfaI GTAC 6 cut(s) 504, 548, 576, 730, 1258, 1503
AfiI CCNNNNNNNGG 2 cut(s) 104, 486
AflII CTTAAG 1 cut(s) 1286
AflIII ACRYGT 3 cut(s) 878, 1463, 1465
AgsI TTSAA 6 cut(s) 284, 703, 746, 1015, 1188, 1249
AhlI ACTAGT 1 cut(s) 505
AjnI CCWGG 2 cut(s) 87, 357
AluBI AGCT 3 cut(s) 680, 1010, 1175
AluI AGCT 3 cut(s) 680, 1010, 1175
Alw26I GTCTC 1 cut(s) 514
AlwI GGATC 2 cut(s) 1012, 1532
AlwNI CAGNNNCTG 2 cut(s) 49, 518
Ama87I CYCGRG 1 cut(s) 104
AoxI GGCC 1 cut(s) 973
ApoI RAATTY 4 cut(s) 279, 407, 464, 1624
Asp718I GGTACC 1 cut(s) 1256
AspS9I GGNCC 4 cut(s) 212, 593, 670, 805
AsuC2I CCSGG 2 cut(s) 105, 106
AsuHPI GGTGA 1 cut(s) 326
AsuII TTCGAA 1 cut(s) 1389
AvaI CYCGRG 1 cut(s) 104
AvaII GGWCC 4 cut(s) 212, 593, 670, 805
BaeI ACNNNNGTAYC 2 cut(s) 764, 797
BalI TGGCCA 1 cut(s) 975
BanI GGYRCC 1 cut(s) 1256
BanII GRGCYC 1 cut(s) 957
BauI CACGAG 3 cut(s) 687, 950, 1066
BbrPI CACGTG 1 cut(s) 1466
BccI CCATC 2 cut(s) 1084, 1549
BceAI ACGGC 1 cut(s) 527
BciT130I CCWGG 2 cut(s) 89, 359
BciVI GTATCC 1 cut(s) 1323
BcnI CCSGG 2 cut(s) 105, 106
BcoDI GTCTC 1 cut(s) 514
BcuI ACTAGT 1 cut(s) 505
BfaI CTAG 5 cut(s) 506, 674, 858, 935, 1356
BfrI CTTAAG 1 cut(s) 1286
BfuI GTATCC 1 cut(s) 1323
Bme1390I CCNGG 4 cut(s) 89, 105, 106, 359
Bme18I GGWCC 4 cut(s) 212, 593, 670, 805
BmeT110I CYCGRG 1 cut(s) 104
BmgT120I GGNCC 4 cut(s) 212, 593, 670, 805
BmiI GGNNCC 1 cut(s) 1258
BmrFI CCNGG 4 cut(s) 89, 105, 106, 359
BmsI GCATC 4 cut(s) 141, 632, 683, 1265
Bpu14I TTCGAA 1 cut(s) 1389
BpuMI CCSGG 2 cut(s) 105, 106
Bsa29I ATCGAT 2 cut(s) 750, 1536
BsaAI YACGTR 3 cut(s) 1398, 1466, 1634
BsaBI GATNNNNATC 1 cut(s) 746
BsaJI CCNNGG 4 cut(s) 104, 208, 357, 957
BsaWI WCCGGW 1 cut(s) 1544
BsaXI ACNNNNNCTCC 4 cut(s) 338, 368, 482, 512
Bsc4I CCNNNNNNNGG 2 cut(s) 104, 486
Bse118I RCCGGY 1 cut(s) 595
Bse1I ACTGG 2 cut(s) 122, 1477
Bse8I GATNNNNATC 1 cut(s) 746
BseBI CCWGG 2 cut(s) 89, 359
BseCI ATCGAT 2 cut(s) 750, 1536
BseDI CCNNGG 4 cut(s) 104, 208, 357, 957
BseGI GGATG 3 cut(s) 698, 731, 1541
BseJI GATNNNNATC 1 cut(s) 746
BseLI CCNNNNNNNGG 2 cut(s) 104, 486
BseMII CTCAG 1 cut(s) 525
BseNI ACTGG 2 cut(s) 122, 1477
Bsh1236I CGCG 1 cut(s) 210
Bsh1285I CGRYCG 1 cut(s) 1434
BshFI GGCC 1 cut(s) 975
BshNI GGYRCC 1 cut(s) 1256
BshVI ATCGAT 2 cut(s) 750, 1536
BsiEI CGRYCG 1 cut(s) 1434
BsiHKCI CYCGRG 1 cut(s) 104
BsiSI CCGG 3 cut(s) 105, 596, 1545
BslFI GGGAC 1 cut(s) 1535
BslI CCNNNNNNNGG 2 cut(s) 104, 486
BsmAI GTCTC 1 cut(s) 514
BsmFI GGGAC 1 cut(s) 1535
BsnI GGCC 1 cut(s) 975
BsoBI CYCGRG 1 cut(s) 104
Bsp119I TTCGAA 1 cut(s) 1389
Bsp1286I GDGCHC 1 cut(s) 957
Bsp1407I TGTACA 1 cut(s) 728
Bsp143I GATC 5 cut(s) 520, 1004, 1431, 1449, 1537
BspACI CCGC 2 cut(s) 208, 210
BspANI GGCC 1 cut(s) 975
BspCNI CTCAG 1 cut(s) 524
BspDI ATCGAT 2 cut(s) 750, 1536
BspFNI CGCG 1 cut(s) 210
BspLI GGNNCC 1 cut(s) 1258
BspPI GGATC 2 cut(s) 1012, 1532
BspT104I TTCGAA 1 cut(s) 1389
BspT107I GGYRCC 1 cut(s) 1256
BspTI CTTAAG 1 cut(s) 1286
BsrFI RCCGGY 1 cut(s) 595
BsrGI TGTACA 1 cut(s) 728
BsrI ACTGG 2 cut(s) 122, 1477
BssAI RCCGGY 1 cut(s) 595
BssECI CCNNGG 4 cut(s) 104, 208, 357, 957
BssMI GATC 5 cut(s) 520, 1004, 1431, 1449, 1537
BssSI CACGAG 3 cut(s) 687, 950, 1066
Bst2BI CACGAG 3 cut(s) 687, 950, 1066
Bst2UI CCWGG 2 cut(s) 89, 359
Bst4CI ACNGT 3 cut(s) 498, 1097, 1506
Bst6I CTCTTC 1 cut(s) 356
BstAFI CTTAAG 1 cut(s) 1286
BstAUI TGTACA 1 cut(s) 728
BstBAI YACGTR 3 cut(s) 1398, 1466, 1634
BstBI TTCGAA 1 cut(s) 1389
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 2 cut(s) 511, 1438
BstDSI CCRYGG 2 cut(s) 208, 957
BstF5I GGATG 3 cut(s) 698, 731, 1541
BstFNI CGCG 1 cut(s) 210
BstKTI GATC 5 cut(s) 523, 1007, 1434, 1452, 1540
BstMAI GTCTC 1 cut(s) 514
BstMBI GATC 5 cut(s) 520, 1004, 1431, 1449, 1537
BstMCI CGRYCG 1 cut(s) 1434
BstMWI GCNNNNNNNGC 1 cut(s) 129
BstNI CCWGG 2 cut(s) 89, 359
BstNSI RCATGY 3 cut(s) 195, 882, 1122
BstSCI CCNGG 4 cut(s) 87, 103, 104, 357
BstSNI TACGTA 1 cut(s) 1634
BstUI CGCG 1 cut(s) 210
Bsu15I ATCGAT 2 cut(s) 750, 1536
BsuI GTATCC 1 cut(s) 1323
BsuRI GGCC 1 cut(s) 975
BsuTUI ATCGAT 2 cut(s) 750, 1536
BtgI CCRYGG 2 cut(s) 208, 957
BtgZI GCGATG 1 cut(s) 1288
BtsCI GGATG 3 cut(s) 698, 731, 1541
BtsI GCAGTG 1 cut(s) 770
BtsIMutI CAGTG 2 cut(s) 770, 1470
Cac8I GCNNGC 1 cut(s) 193
CaiI CAGNNNCTG 2 cut(s) 49, 518
Cfr10I RCCGGY 1 cut(s) 595
Cfr13I GGNCC 4 cut(s) 212, 593, 670, 805
Cfr42I CCGCGG 1 cut(s) 211
Cfr9I CCCGGG 1 cut(s) 104
ClaI ATCGAT 2 cut(s) 750, 1536
Csp6I GTAC 6 cut(s) 503, 547, 575, 729, 1257, 1502
CspCI CAANNNNNGTGG 2 cut(s) 946, 981
CviAII CATG 8 cut(s) 192, 338, 412, 667, 879, 1119, 1555, 1598
CviQI GTAC 6 cut(s) 503, 547, 575, 729, 1257, 1502
DdeI CTNAG 2 cut(s) 511, 1438
DpnI GATC 5 cut(s) 522, 1006, 1433, 1451, 1539
DpnII GATC 5 cut(s) 520, 1004, 1431, 1449, 1537
DraI TTTAAA 2 cut(s) 463, 895
EaeI YGGCCR 1 cut(s) 973
Eam1104I CTCTTC 1 cut(s) 356
EarI CTCTTC 1 cut(s) 356
Eco105I TACGTA 1 cut(s) 1634
Eco24I GRGCYC 1 cut(s) 957
Eco47I GGWCC 4 cut(s) 212, 593, 670, 805
Eco72I CACGTG 1 cut(s) 1466
Eco88I CYCGRG 1 cut(s) 104
EcoO109I RGGNCCY 1 cut(s) 805
EcoRII CCWGG 2 cut(s) 87, 357
EcoT38I GRGCYC 1 cut(s) 957
FaeI CATG 8 cut(s) 195, 341, 415, 670, 882, 1122, 1558, 1601
FaqI GGGAC 1 cut(s) 1535
FatI CATG 8 cut(s) 191, 337, 411, 666, 878, 1118, 1554, 1597
FokI GGATG 3 cut(s) 705, 718, 1528
FriOI GRGCYC 1 cut(s) 957
FspBI CTAG 5 cut(s) 506, 674, 858, 935, 1356
HaeIII GGCC 1 cut(s) 975
HapII CCGG 3 cut(s) 105, 596, 1545
Hin1II CATG 8 cut(s) 195, 341, 415, 670, 882, 1122, 1558, 1601
HincII GTYRAC 2 cut(s) 1093, 1461
HindII GTYRAC 2 cut(s) 1093, 1461
HinfI GANTC 4 cut(s) 149, 438, 1084, 1386
HpaII CCGG 3 cut(s) 105, 596, 1545
HphI GGTGA 1 cut(s) 326
Hpy166II GTNNAC 5 cut(s) 547, 1022, 1093, 1199, 1461
Hpy188I TCNGA 6 cut(s) 40, 372, 443, 520, 709, 1165
Hpy188III TCNNGA 2 cut(s) 1002, 1411
Hpy8I GTNNAC 5 cut(s) 547, 1022, 1093, 1199, 1461
Hpy99I CGWCG 1 cut(s) 917
HpyAV CCTTC 3 cut(s) 79, 256, 419
HpyCH4III ACNGT 3 cut(s) 498, 1097, 1506
HpyCH4IV ACGT 6 cut(s) 33, 915, 1397, 1465, 1620, 1633
HpyCH4V TGCA 9 cut(s) 13, 195, 415, 623, 696, 763, 1118, 1405, 1576
HpyF10VI GCNNNNNNNGC 1 cut(s) 129
HpyF3I CTNAG 2 cut(s) 511, 1438
HpySE526I ACGT 6 cut(s) 33, 915, 1397, 1465, 1620, 1633
Hsp92II CATG 8 cut(s) 195, 341, 415, 670, 882, 1122, 1558, 1601
KpnI GGTACC 1 cut(s) 1260
KspI CCGCGG 1 cut(s) 211
Kzo9I GATC 5 cut(s) 520, 1004, 1431, 1449, 1537
LweI GCATC 4 cut(s) 141, 632, 683, 1265
MaeI CTAG 5 cut(s) 506, 674, 858, 935, 1356
MaeII ACGT 6 cut(s) 33, 915, 1397, 1465, 1620, 1633
MaeIII GTNAC 5 cut(s) 302, 566, 1121, 1468, 1480
MalI GATC 5 cut(s) 522, 1006, 1433, 1451, 1539
MboI GATC 5 cut(s) 520, 1004, 1431, 1449, 1537
MboII GAAGA 6 cut(s) 193, 196, 343, 461, 751, 810
MfeI CAATTG 2 cut(s) 1249, 1268
MhlI GDGCHC 1 cut(s) 957
MlsI TGGCCA 1 cut(s) 975
MluNI TGGCCA 1 cut(s) 975
MlyI GAGTC 3 cut(s) 143, 447, 1093
MmeI TCCRAC 1 cut(s) 1488
MnlI CCTC 4 cut(s) 359, 955, 1062, 1485
Mox20I TGGCCA 1 cut(s) 975
MscI TGGCCA 1 cut(s) 975
MslI CAYNNNNRTG 1 cut(s) 336
Msp20I TGGCCA 1 cut(s) 975
MspA1I CMGCKG 1 cut(s) 210
MspCI CTTAAG 1 cut(s) 1286
MspI CCGG 3 cut(s) 105, 596, 1545
MspR9I CCNGG 4 cut(s) 89, 105, 106, 359
MunI CAATTG 2 cut(s) 1249, 1268
MvaI CCWGG 2 cut(s) 89, 359
MvnI CGCG 1 cut(s) 210
MwoI GCNNNNNNNGC 1 cut(s) 129
NciI CCSGG 2 cut(s) 105, 106
NdeII GATC 5 cut(s) 520, 1004, 1431, 1449, 1537
NlaIII CATG 8 cut(s) 195, 341, 415, 670, 882, 1122, 1558, 1601
NlaIV GGNNCC 1 cut(s) 1258
NmuCI GTSAC 3 cut(s) 566, 1468, 1480
NspI RCATGY 3 cut(s) 195, 882, 1122
NspV TTCGAA 1 cut(s) 1389
PaeI GCATGC 1 cut(s) 195
PciI ACATGT 1 cut(s) 878
PfeI GAWTC 1 cut(s) 1386
PflFI GACNNNGTC 1 cut(s) 668
Ple19I CGATCG 1 cut(s) 1434
PleI GAGTC 3 cut(s) 143, 446, 1092
PmaCI CACGTG 1 cut(s) 1466
PmlI CACGTG 1 cut(s) 1466
PpsI GAGTC 3 cut(s) 143, 446, 1092
Ppu21I YACGTR 3 cut(s) 1398, 1466, 1634
PpuMI RGGWCCY 1 cut(s) 805
PscI ACATGT 1 cut(s) 878
PsiI TTATAA 1 cut(s) 1059
Psp5II RGGWCCY 1 cut(s) 805
Psp6I CCWGG 2 cut(s) 87, 357
PspCI CACGTG 1 cut(s) 1466
PspGI CCWGG 2 cut(s) 87, 357
PspN4I GGNNCC 1 cut(s) 1258
PspPI GGNCC 4 cut(s) 212, 593, 670, 805
PspPPI RGGWCCY 1 cut(s) 805
PstNI CAGNNNCTG 2 cut(s) 49, 518
PsyI GACNNNGTC 1 cut(s) 668
PvuI CGATCG 1 cut(s) 1434
RsaI GTAC 6 cut(s) 504, 548, 576, 730, 1258, 1503
RsaNI GTAC 6 cut(s) 503, 547, 575, 729, 1257, 1502
RseI CAYNNNNRTG 1 cut(s) 336
SacII CCGCGG 1 cut(s) 211
Sau3AI GATC 5 cut(s) 520, 1004, 1431, 1449, 1537
Sau96I GGNCC 4 cut(s) 212, 593, 670, 805
SchI GAGTC 3 cut(s) 143, 447, 1093
ScrFI CCNGG 4 cut(s) 89, 105, 106, 359
SduI GDGCHC 1 cut(s) 957
SfaNI GCATC 4 cut(s) 141, 632, 683, 1265
Sfr303I CCGCGG 1 cut(s) 211
SfuI TTCGAA 1 cut(s) 1389
SgrBI CCGCGG 1 cut(s) 211
SinI GGWCC 4 cut(s) 212, 593, 670, 805
SmaI CCCGGG 1 cut(s) 106
SmiI ATTTAAAT 1 cut(s) 463
SmiMI CAYNNNNRTG 1 cut(s) 336
SmlI CTYRAG 1 cut(s) 1286
SmoI CTYRAG 1 cut(s) 1286
SnaBI TACGTA 1 cut(s) 1634
SpeI ACTAGT 1 cut(s) 505
SphI GCATGC 1 cut(s) 195
SsiI CCGC 2 cut(s) 208, 210
SspI AATATT 1 cut(s) 387
SspMI CTAG 5 cut(s) 506, 674, 858, 935, 1356
StyD4I CCNGG 4 cut(s) 87, 103, 104, 357
SwaI ATTTAAAT 1 cut(s) 463
TaaI ACNGT 3 cut(s) 498, 1097, 1506
TaiI ACGT 6 cut(s) 36, 918, 1400, 1468, 1623, 1636
TaqI TCGA 5 cut(s) 147, 635, 750, 1389, 1536
TatI WGTACW 1 cut(s) 728
TfiI GAWTC 1 cut(s) 1386
TscAI CASTG 2 cut(s) 770, 1477
TseFI GTSAC 3 cut(s) 566, 1468, 1480
Tsp45I GTSAC 3 cut(s) 566, 1468, 1480
TspDTI ATGAA 5 cut(s) 400, 1132, 1571, 1578, 1623
TspGWI ACGGA 4 cut(s) 564, 974, 1096, 1350
TspMI CCCGGG 1 cut(s) 104
TspRI CASTG 2 cut(s) 770, 1477
Tth111I GACNNNGTC 1 cut(s) 668
Vha464I CTTAAG 1 cut(s) 1286
VpaK11BI GGWCC 4 cut(s) 212, 593, 670, 805
XapI RAATTY 4 cut(s) 279, 407, 464, 1624
XceI RCATGY 3 cut(s) 195, 882, 1122
XcmI CCANNNNNNNNNTGG 2 cut(s) 134, 983
XmaI CCCGGG 1 cut(s) 104
XspI CTAG 5 cut(s) 506, 674, 858, 935, 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.