pycom15g06360

Peptidyl-prolyl

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
3885663 .. 3888933
3271 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1662 bp
ATGGAGGTTGAGAAAGGCACAAACCTGTCGGATATCGAGAACGACCTCGACGAGGAACCCGGCGAGGTGATCGAATCGGCGCCGCCTCTCGAAGTCGGCGAAGAGAGAGAGCTCGGTAGCTCCGGCATCAAGAAGAAGCTCCTCCAGCGCGGCTATGGCTACGATGCCCCTGAGTTCGGCGACGAAGCCACTGTGCACTATGTTGGGACTTTGCTTGATGGGACGAAGATCGAGTCCACTAGAGATGGAGACGATCCTCTCACTATTAAGCTCGGTGAGGGCCGAGTGGTGAAGGGTTTGGATTATGCAGTCGTGACTACGAAAAAGGGAGAGATTGCATTATTCACATTACCTGCTGAGTTGGGCTATGACAATGCTGCTGTTCGATTTGAAGTTGAGCTCATTTCGTGGATTAGGGTGGTGGATTTGAGCAGAGATGGTGGGATTGTTAAGAAGATTGTGGAGAAAGGAGAGAGGAACGAGCTGCCTAGTGATCTGGATGAAGTTCTTGTCAAGTATAGTGCGGCGTTGGCTGATGGCACTGTTGTTGCAGAAACGCCAGAAGAAGGAATTGAATTCTATGTGAAAGATGGTCATTTTTGTCCAGCATTTCCGAAAGCAATCAAGACAATGAAAGGGGGAGAGAAGGCCAAATTAATTGTTCAACCTCGGTATGCCTTTGGGGAGGAGGGGAGGGATGCGAACGAGGGGTTTACTTCTATCCCTCCAAGTTCCGTGCTCAATATTGACACGGAGTTGGTGTCTTTCAAGCCTGTTATTGACATTACAGGTGATGCCAAGGTACTAAAGAAGATCTTGAAAGAAGGGGAAGGCGCATGGACTGCTAATGAAGGTGCAAGTGTTACTGTTAGCTATATAGCTAGGCTTGAAGACAGCACTGTCTTTGACAAAAAGGGAGTAGATGGAGAGCAGCCTTTGGAGTTTATCACAGATGAAGAACAAGTGATTGCTGGTTTAGACCGAGCAGTTGCAACAATGAAAAAGGGAGAGCTGGCAATACTGACTATACATCCTGATTTTGGATTTGGAAGCGTTGAAGTAAGGCGGGACCTGGCTGTTGTACCACCATGTTCGAATGTCTTCTTTGAAGTTGAAATGTTAGATTTTATCAGGGAAAAAGCACCATGGGAAATGAGCAATCAAGAGAGACTTGAGGCAGCAGGAAAGAAGAAAGAGGAAGGCAACCTTCTCTTTAAAAAGGGGAAGCATCAACAAGCAGGGAAAAAATATGATAAGGCTGCTGATTATGTTAGTGAAGATGGAAACTTTGGGGATGATGAGTCGAAGCTGGCAAGACCACTGCGAATGTTATGTTGGTTGAACGGTGCAGCATGTAGCCTAAAACTAAATGACTTTCAGGAAGCGATCAAGCTATGTTCAAAGGTACTAGATATCGAGTTCCACAATGTAAAAGCCTTGTACAGACGGGCACAAGCGTATATGGAAATTGCAGATTTGGTCTTGGCTGAATTAGACATCAAGAAAGCTCTTGAGGTTGATCCTCATAACAGGGAGGTCAAGCTGATTGAGAAGAACTTGAAACGACTTCAAGTTGAAAGCGACAAGAGGGATGCTAAGCTCTACACGAACATCTTTGGACGAGCTACAAAGAAATTGAAAGTCGAGGACGAGAAAAGATGA

Protein Analysis

554

Amino Acids

61.35

Weight (kDa)

4.95

Isoelectric Point (pI)

31.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKBP_C PF00254 56 - 128 4.6e-17 FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C PF00254 163 - 254 1.1e-15 FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C PF00254 281 - 374 3.4e-19 FKBP-type peptidyl-prolyl cis-trans isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 899
Acc36I ACCTGC 1 cut(s) 361
AccB1I GGYRCC 1 cut(s) 79
AccII CGCG 1 cut(s) 150
AciI CCGC 4 cut(s) 83, 150, 524, 1066
AclWI GGATC 2 cut(s) 248, 1514
AcsI RAATTY 1 cut(s) 575
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 4 cut(s) 804, 1083, 1407, 1442
AfiI CCNNNNNNNGG 4 cut(s) 52, 176, 566, 1040
AjnI CCWGG 1 cut(s) 1071
AjuI GAANNNNNNNTTGG 2 cut(s) 1318, 1350
Alw21I GWGCWC 4 cut(s) 114, 198, 402, 741
Alw26I GTCTC 2 cut(s) 243, 1162
Alw44I GTGCAC 1 cut(s) 194
AlwI GGATC 2 cut(s) 248, 1514
AoxI GGCC 2 cut(s) 280, 648
ApaLI GTGCAC 1 cut(s) 194
ApeKI GCWGC 6 cut(s) 377, 484, 931, 1178, 1259, 1349
ApoI RAATTY 1 cut(s) 575
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
AseI ATTAAT 1 cut(s) 656
Asp700I GAANNNNTTC 1 cut(s) 1100
AspLEI GCGC 3 cut(s) 82, 150, 836
AspS9I GGNCC 2 cut(s) 280, 1069
AsuC2I CCSGG 1 cut(s) 60
AsuHPI GGTGA 4 cut(s) 79, 287, 301, 803
AsuII TTCGAA 1 cut(s) 1094
AvaII GGWCC 1 cut(s) 1069
BaeGI GKGCMC 2 cut(s) 198, 1453
BanI GGYRCC 1 cut(s) 79
BanII GRGCYC 2 cut(s) 114, 402
BbsI GAAGAC 2 cut(s) 897, 1093
Bbv12I GWGCWC 4 cut(s) 114, 198, 402, 741
BbvI GCAGC 6 cut(s) 364, 471, 943, 1190, 1246, 1361
BccI CCATC 7 cut(s) 212, 239, 431, 530, 584, 917, 1274
BciT130I CCWGG 1 cut(s) 1073
BcnI CCSGG 1 cut(s) 60
BcoDI GTCTC 2 cut(s) 243, 1162
BfaI CTAG 4 cut(s) 240, 489, 882, 1409
BfoI RGCGCY 1 cut(s) 83
BfuAI ACCTGC 1 cut(s) 361
BglII AGATCT 1 cut(s) 813
BisI GCNGC 9 cut(s) 83, 151, 378, 485, 525, 932, 1179, 1260, 1350
BlpI GCTNAGC 1 cut(s) 1596
BlsI GCNGC 9 cut(s) 84, 152, 379, 486, 526, 933, 1180, 1261, 1351
Bme1390I CCNGG 2 cut(s) 60, 1073
Bme18I GGWCC 1 cut(s) 1069
BmgT120I GGNCC 2 cut(s) 280, 1069
BmiI GGNNCC 3 cut(s) 57, 81, 1070
BmrFI CCNGG 2 cut(s) 60, 1073
BmsI GCATC 6 cut(s) 135, 154, 688, 784, 1237, 1582
BpiI GAAGAC 2 cut(s) 897, 1093
BpmI CTGGAG 1 cut(s) 128
Bpu1102I GCTNAGC 1 cut(s) 1596
Bpu14I TTCGAA 1 cut(s) 1094
BpuEI CTTGAG 2 cut(s) 1193, 1532
BpuMI CCSGG 1 cut(s) 60
BsaHI GRCGYC 1 cut(s) 80
BsaJI CCNNGG 3 cut(s) 668, 798, 1145
BsaXI ACNNNNNCTCC 2 cut(s) 746, 776
Bsc4I CCNNNNNNNGG 4 cut(s) 52, 176, 566, 1040
BseBI CCWGG 1 cut(s) 1073
BseDI CCNNGG 3 cut(s) 668, 798, 1145
BseGI GGATG 5 cut(s) 505, 703, 1030, 1300, 1597
BseLI CCNNNNNNNGG 4 cut(s) 52, 176, 566, 1040
BseMII CTCAG 2 cut(s) 162, 348
BseRI GAGGAG 2 cut(s) 131, 701
BseSI GKGCMC 2 cut(s) 198, 1453
BseXI GCAGC 6 cut(s) 364, 471, 943, 1190, 1246, 1361
BsgI GTGCAG 1 cut(s) 1368
Bsh1236I CGCG 1 cut(s) 150
BshFI GGCC 2 cut(s) 282, 650
BshNI GGYRCC 1 cut(s) 79
BsiHKAI GWGCWC 4 cut(s) 114, 198, 402, 741
BsiSI CCGG 2 cut(s) 60, 123
BslFI GGGAC 3 cut(s) 220, 235, 1082
BslI CCNNNNNNNGG 4 cut(s) 52, 176, 566, 1040
BsmAI GTCTC 2 cut(s) 243, 1162
BsmBI CGTCTC 1 cut(s) 243
BsmFI GGGAC 3 cut(s) 220, 235, 1082
BsnI GGCC 2 cut(s) 282, 650
Bsp119I TTCGAA 1 cut(s) 1094
Bsp1286I GDGCHC 5 cut(s) 114, 198, 402, 741, 1453
Bsp1407I TGTACA 1 cut(s) 1440
Bsp143I GATC 7 cut(s) 69, 228, 253, 493, 813, 1386, 1519
Bsp1720I GCTNAGC 1 cut(s) 1596
Bsp19I CCATGG 1 cut(s) 1145
BspACI CCGC 4 cut(s) 83, 150, 524, 1066
BspANI GGCC 2 cut(s) 282, 650
BspCNI CTCAG 2 cut(s) 163, 349
BspFNI CGCG 1 cut(s) 150
BspLI GGNNCC 3 cut(s) 57, 81, 1070
BspMI ACCTGC 1 cut(s) 361
BspPI GGATC 2 cut(s) 248, 1514
BspT104I TTCGAA 1 cut(s) 1094
BspT107I GGYRCC 1 cut(s) 79
BsrGI TGTACA 1 cut(s) 1440
BssECI CCNNGG 3 cut(s) 668, 798, 1145
BssMI GATC 7 cut(s) 69, 228, 253, 493, 813, 1386, 1519
BssNI GRCGYC 1 cut(s) 80
BssT1I CCWWGG 2 cut(s) 798, 1145
Bst2UI CCWGG 1 cut(s) 1073
Bst4CI ACNGT 5 cut(s) 193, 544, 868, 901, 1346
Bst6I CTCTTC 1 cut(s) 96
BstACI GRCGYC 1 cut(s) 80
BstAPI GCANNNNNTGC 1 cut(s) 842
BstAUI TGTACA 1 cut(s) 1440
BstBI TTCGAA 1 cut(s) 1094
BstC8I GCNNGC 2 cut(s) 1014, 1311
BstDEI CTNAG 3 cut(s) 171, 357, 1596
BstDSI CCRYGG 1 cut(s) 1145
BstENI CCTNNNNNAGG 1 cut(s) 50
BstF5I GGATG 5 cut(s) 505, 703, 1030, 1300, 1597
BstFNI CGCG 1 cut(s) 150
BstH2I RGCGCY 1 cut(s) 83
BstHHI GCGC 3 cut(s) 82, 150, 836
BstKTI GATC 7 cut(s) 72, 231, 256, 496, 816, 1389, 1522
BstMAI GTCTC 2 cut(s) 243, 1162
BstMBI GATC 7 cut(s) 69, 228, 253, 493, 813, 1386, 1519
BstMWI GCNNNNNNNGC 4 cut(s) 145, 156, 530, 842
BstNI CCWGG 1 cut(s) 1073
BstNSI RCATGY 1 cut(s) 1356
BstSCI CCNGG 2 cut(s) 58, 1071
BstSLI GKGCMC 2 cut(s) 198, 1453
BstUI CGCG 1 cut(s) 150
BstV1I GCAGC 6 cut(s) 364, 471, 943, 1190, 1246, 1361
BstV2I GAAGAC 2 cut(s) 897, 1093
BstX2I RGATCY 1 cut(s) 813
BstYI RGATCY 1 cut(s) 813
BsuRI GGCC 2 cut(s) 282, 650
BtgI CCRYGG 1 cut(s) 1145
BtsCI GGATG 5 cut(s) 505, 703, 1030, 1300, 1597
BtsI GCAGTG 1 cut(s) 1319
BtsIMutI CAGTG 4 cut(s) 189, 540, 897, 1319
BveI ACCTGC 1 cut(s) 361
Cac8I GCNNGC 2 cut(s) 1014, 1311
CfoI GCGC 3 cut(s) 82, 150, 836
Cfr13I GGNCC 2 cut(s) 280, 1069
Csp6I GTAC 4 cut(s) 803, 1082, 1406, 1441
CviAII CATG 4 cut(s) 837, 1089, 1146, 1353
CviQI GTAC 4 cut(s) 803, 1082, 1406, 1441
DdeI CTNAG 3 cut(s) 171, 357, 1596
DinI GGCGCC 1 cut(s) 81
DpnI GATC 7 cut(s) 71, 230, 255, 495, 815, 1388, 1521
DpnII GATC 7 cut(s) 69, 228, 253, 493, 813, 1386, 1519
DraI TTTAAA 1 cut(s) 1216
DrdI GACNNNNNNGTC 1 cut(s) 899
DseDI GACNNNNNNGTC 1 cut(s) 899
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
Ecl136II GAGCTC 2 cut(s) 112, 400
Eco130I CCWWGG 2 cut(s) 798, 1145
Eco24I GRGCYC 2 cut(s) 114, 402
Eco32I GATATC 2 cut(s) 34, 1414
Eco47I GGWCC 1 cut(s) 1069
Eco53kI GAGCTC 2 cut(s) 112, 400
EcoICRI GAGCTC 2 cut(s) 112, 400
EcoNI CCTNNNNNAGG 1 cut(s) 50
EcoO109I RGGNCCY 1 cut(s) 1069
EcoRI GAATTC 1 cut(s) 575
EcoRII CCWGG 1 cut(s) 1071
EcoRV GATATC 2 cut(s) 34, 1414
EcoT14I CCWWGG 2 cut(s) 798, 1145
EcoT38I GRGCYC 2 cut(s) 114, 402
EgeI GGCGCC 1 cut(s) 81
EheI GGCGCC 1 cut(s) 81
ErhI CCWWGG 2 cut(s) 798, 1145
Esp3I CGTCTC 1 cut(s) 243
FaeI CATG 4 cut(s) 840, 1092, 1149, 1356
FalI AAGNNNNNCTT 6 cut(s) 800, 832, 1155, 1187, 1191, 1223
FaqI GGGAC 3 cut(s) 220, 235, 1082
FatI CATG 4 cut(s) 836, 1088, 1145, 1352
FauI CCCGC 1 cut(s) 1059
Fnu4HI GCNGC 9 cut(s) 83, 151, 378, 485, 525, 932, 1179, 1260, 1350
FokI GGATG 5 cut(s) 512, 710, 1017, 1307, 1604
FriOI GRGCYC 2 cut(s) 114, 402
Fsp4HI GCNGC 9 cut(s) 83, 151, 378, 485, 525, 932, 1179, 1260, 1350
FspBI CTAG 4 cut(s) 240, 489, 882, 1409
GlaI GCGC 3 cut(s) 81, 149, 835
GluI GCNGC 9 cut(s) 83, 151, 378, 485, 525, 932, 1179, 1260, 1350
GsuI CTGGAG 1 cut(s) 128
HaeII RGCGCY 1 cut(s) 83
HaeIII GGCC 2 cut(s) 282, 650
HapII CCGG 2 cut(s) 60, 123
HhaI GCGC 3 cut(s) 82, 150, 836
Hin1I GRCGYC 1 cut(s) 80
Hin1II CATG 4 cut(s) 840, 1092, 1149, 1356
Hin6I GCGC 3 cut(s) 80, 148, 834
HinP1I GCGC 3 cut(s) 80, 148, 834
HinfI GANTC 3 cut(s) 74, 233, 1301
HpaII CCGG 2 cut(s) 60, 123
HphI GGTGA 4 cut(s) 79, 287, 301, 803
Hpy166II GTNNAC 3 cut(s) 196, 237, 714
Hpy188I TCNGA 2 cut(s) 31, 615
Hpy8I GTNNAC 3 cut(s) 196, 237, 714
Hpy99I CGWCG 2 cut(s) 53, 185
HpyAV CCTTC 8 cut(s) 286, 560, 640, 818, 824, 845, 1193, 1217
HpyCH4III ACNGT 5 cut(s) 193, 544, 868, 901, 1346
HpyCH4V TGCA 8 cut(s) 196, 308, 338, 551, 857, 992, 1349, 1472
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 156, 530, 842
HpyF3I CTNAG 3 cut(s) 171, 357, 1596
Hsp92I GRCGYC 1 cut(s) 80
Hsp92II CATG 4 cut(s) 840, 1092, 1149, 1356
HspAI GCGC 3 cut(s) 80, 148, 834
KasI GGCGCC 1 cut(s) 79
Kzo9I GATC 7 cut(s) 69, 228, 253, 493, 813, 1386, 1519
LmnI GCTCC 2 cut(s) 125, 144
Lsp1109I GCAGC 6 cut(s) 364, 471, 943, 1190, 1246, 1361
LweI GCATC 6 cut(s) 135, 154, 688, 784, 1237, 1582
MaeI CTAG 4 cut(s) 240, 489, 882, 1409
MaeIII GTNAC 2 cut(s) 313, 862
MalI GATC 7 cut(s) 71, 230, 255, 495, 815, 1388, 1521
MboI GATC 7 cut(s) 69, 228, 253, 493, 813, 1386, 1519
MflI RGATCY 1 cut(s) 813
MhlI GDGCHC 5 cut(s) 114, 198, 402, 741, 1453
MluCI AATT 7 cut(s) 570, 575, 653, 657, 1467, 1490, 1634
Mly113I GGCGCC 1 cut(s) 80
MlyI GAGTC 2 cut(s) 242, 1310
MmeI TCCRAC 1 cut(s) 9
MroXI GAANNNNTTC 1 cut(s) 1100
MseI TTAA 4 cut(s) 267, 450, 656, 1215
MspI CCGG 2 cut(s) 60, 123
MspR9I CCNGG 2 cut(s) 60, 1073
MvaI CCWGG 1 cut(s) 1073
MvnI CGCG 1 cut(s) 150
MwoI GCNNNNNNNGC 4 cut(s) 145, 156, 530, 842
NarI GGCGCC 1 cut(s) 80
NciI CCSGG 1 cut(s) 60
NcoI CCATGG 1 cut(s) 1145
NdeII GATC 7 cut(s) 69, 228, 253, 493, 813, 1386, 1519
NlaIII CATG 4 cut(s) 840, 1092, 1149, 1356
NlaIV GGNNCC 3 cut(s) 57, 81, 1070
NmeAIII GCCGAG 1 cut(s) 308
NmuCI GTSAC 1 cut(s) 313
NspI RCATGY 1 cut(s) 1356
NspV TTCGAA 1 cut(s) 1094
PcsI WCGNNNNNNNCGW 2 cut(s) 48, 96
PdmI GAANNNNTTC 1 cut(s) 1100
PfeI GAWTC 1 cut(s) 74
PkrI GCNGC 9 cut(s) 84, 152, 379, 486, 526, 933, 1180, 1261, 1351
PleI GAGTC 2 cut(s) 241, 1309
PluTI GGCGCC 1 cut(s) 83
PpsI GAGTC 2 cut(s) 241, 1309
PpuMI RGGWCCY 1 cut(s) 1069
PshBI ATTAAT 1 cut(s) 656
Psp124BI GAGCTC 2 cut(s) 114, 402
Psp5II RGGWCCY 1 cut(s) 1069
Psp6I CCWGG 1 cut(s) 1071
PspGI CCWGG 1 cut(s) 1071
PspN4I GGNNCC 3 cut(s) 57, 81, 1070
PspPI GGNCC 2 cut(s) 280, 1069
PspPPI RGGWCCY 1 cut(s) 1069
PsuI RGATCY 1 cut(s) 813
RsaI GTAC 4 cut(s) 804, 1083, 1407, 1442
RsaNI GTAC 4 cut(s) 803, 1082, 1406, 1441
SacI GAGCTC 2 cut(s) 114, 402
SaqAI TTAA 4 cut(s) 267, 450, 656, 1215
SatI GCNGC 9 cut(s) 83, 151, 378, 485, 525, 932, 1179, 1260, 1350
Sau3AI GATC 7 cut(s) 69, 228, 253, 493, 813, 1386, 1519
Sau96I GGNCC 2 cut(s) 280, 1069
SchI GAGTC 2 cut(s) 242, 1310
ScrFI CCNGG 2 cut(s) 60, 1073
SduI GDGCHC 5 cut(s) 114, 198, 402, 741, 1453
SfaNI GCATC 6 cut(s) 135, 154, 688, 784, 1237, 1582
SfoI GGCGCC 1 cut(s) 81
SfuI TTCGAA 1 cut(s) 1094
SinI GGWCC 1 cut(s) 1069
SmlI CTYRAG 2 cut(s) 1172, 1511
SmoI CTYRAG 2 cut(s) 1172, 1511
Sse9I AATT 7 cut(s) 570, 575, 653, 657, 1467, 1490, 1634
SsiI CCGC 4 cut(s) 83, 150, 524, 1066
SspDI GGCGCC 1 cut(s) 79
SspI AATATT 1 cut(s) 745
SspMI CTAG 4 cut(s) 240, 489, 882, 1409
SstI GAGCTC 2 cut(s) 114, 402
StyD4I CCNGG 2 cut(s) 58, 1071
StyI CCWWGG 2 cut(s) 798, 1145
TaaI ACNGT 5 cut(s) 193, 544, 868, 901, 1346
TaqII GACCGA 1 cut(s) 996
TasI AATT 7 cut(s) 570, 575, 653, 657, 1467, 1490, 1634
TatI WGTACW 1 cut(s) 1440
TauI GCSGC 3 cut(s) 85, 153, 527
TfiI GAWTC 1 cut(s) 74
Tru1I TTAA 4 cut(s) 267, 450, 656, 1215
Tru9I TTAA 4 cut(s) 267, 450, 656, 1215
TscAI CASTG 4 cut(s) 196, 547, 904, 1326
TseFI GTSAC 1 cut(s) 313
TseI GCWGC 6 cut(s) 377, 484, 931, 1178, 1259, 1349
Tsp45I GTSAC 1 cut(s) 313
TspDTI ATGAA 5 cut(s) 516, 647, 864, 969, 1013
TspGWI ACGGA 2 cut(s) 724, 767
TspRI CASTG 4 cut(s) 196, 547, 904, 1326
VneI GTGCAC 1 cut(s) 194
VpaK11BI GGWCC 1 cut(s) 1069
VspI ATTAAT 1 cut(s) 656
XagI CCTNNNNNAGG 1 cut(s) 50
XapI RAATTY 1 cut(s) 575
XceI RCATGY 1 cut(s) 1356
XcmI CCANNNNNNNNNTGG 1 cut(s) 152
XmnI GAANNNNTTC 1 cut(s) 1100
XspI CTAG 4 cut(s) 240, 489, 882, 1409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.