serine protease
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g21880 |
| rosa_chinensis | RchiOBHm_Chr7g0191851 RchiOBHm_Chr7g0202241 |
| rosa_multiflora | Rmu_sc0001659.1_g000041 |
| rosa_roxburghii | Rroxscaffold_7G00195000 |
| rosa_rugosa | Rorug02G0274000 |
| rosa_samantha | Rh1AG274500 Rh1BG200400 Rh1DG069000 Rh2BG228500 Rh2CG233000 Rh3BG311900 Rh4AG236300 Rh4BG146100 Rh5AG221300 Rh5AG392900 Rh5BG251600 Rh5CG382600 Rh5CG532400 Rh6BG243100 Rh7CG368700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 80 |
| AatII | GACGTC | 1 cut(s) | 170 |
| Acc36I | ACCTGC | 3 cut(s) | 80, 799, 815 |
| AccIII | TCCGGA | 1 cut(s) | 266 |
| AciI | CCGC | 9 cut(s) | 32, 135, 349, 352, 362, 437, 447, 698, 973 |
| AcuI | CTGAAG | 2 cut(s) | 233, 376 |
| AcyI | GRCGYC | 1 cut(s) | 167 |
| AfaI | GTAC | 2 cut(s) | 572, 987 |
| AfeI | AGCGCT | 1 cut(s) | 368 |
| AflIII | ACRYGT | 1 cut(s) | 743 |
| AgsI | TTSAA | 7 cut(s) | 15, 544, 776, 872, 997, 1036, 1123 |
| AhlI | ACTAGT | 1 cut(s) | 26 |
| AjiI | CACGTC | 1 cut(s) | 49 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 296, 328 |
| AluBI | AGCT | 9 cut(s) | 253, 261, 497, 590, 646, 704, 779, 842, 939 |
| AluI | AGCT | 9 cut(s) | 253, 261, 497, 590, 646, 704, 779, 842, 939 |
| Alw21I | GWGCWC | 2 cut(s) | 263, 706 |
| Aor13HI | TCCGGA | 1 cut(s) | 266 |
| Aor51HI | AGCGCT | 1 cut(s) | 368 |
| ApeKI | GCWGC | 7 cut(s) | 99, 364, 444, 494, 842, 936, 979 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 157, 189 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 532 |
| AspLEI | GCGC | 2 cut(s) | 129, 369 |
| AspS9I | GGNCC | 2 cut(s) | 407, 827 |
| AsuHPI | GGTGA | 2 cut(s) | 674, 827 |
| AvaII | GGWCC | 2 cut(s) | 407, 827 |
| BanII | GRGCYC | 2 cut(s) | 263, 706 |
| BbsI | GAAGAC | 1 cut(s) | 165 |
| Bbv12I | GWGCWC | 2 cut(s) | 263, 706 |
| BbvI | GCAGC | 7 cut(s) | 86, 376, 456, 506, 829, 948, 966 |
| BccI | CCATC | 2 cut(s) | 154, 943 |
| BcuI | ACTAGT | 1 cut(s) | 26 |
| BfaI | CTAG | 2 cut(s) | 27, 93 |
| BfmI | CTRYAG | 1 cut(s) | 822 |
| BfoI | RGCGCY | 1 cut(s) | 370 |
| BfuAI | ACCTGC | 3 cut(s) | 80, 799, 815 |
| Bme18I | GGWCC | 2 cut(s) | 407, 827 |
| BmgBI | CACGTC | 1 cut(s) | 49 |
| BmgT120I | GGNCC | 2 cut(s) | 407, 827 |
| BmiI | GGNNCC | 2 cut(s) | 271, 409 |
| BmsI | GCATC | 3 cut(s) | 192, 523, 966 |
| BpiI | GAAGAC | 1 cut(s) | 165 |
| Bpu10I | CCTNAGC | 1 cut(s) | 510 |
| Bsa29I | ATCGAT | 1 cut(s) | 517 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1094 |
| BsaHI | GRCGYC | 1 cut(s) | 167 |
| BsaJI | CCNNGG | 2 cut(s) | 657, 671 |
| BsaWI | WCCGGW | 2 cut(s) | 266, 891 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 296, 326 |
| Bse1I | ACTGG | 1 cut(s) | 286 |
| Bse3DI | GCAATG | 2 cut(s) | 450, 845 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1094 |
| BseAI | TCCGGA | 1 cut(s) | 266 |
| BseCI | ATCGAT | 1 cut(s) | 517 |
| BseDI | CCNNGG | 2 cut(s) | 657, 671 |
| BseGI | GGATG | 3 cut(s) | 146, 578, 981 |
| BseJI | GATNNNNATC | 1 cut(s) | 1094 |
| BseMI | GCAATG | 2 cut(s) | 450, 845 |
| BseMII | CTCAG | 2 cut(s) | 433, 501 |
| BseNI | ACTGG | 1 cut(s) | 286 |
| BseRI | GAGGAG | 1 cut(s) | 317 |
| BseXI | GCAGC | 7 cut(s) | 86, 376, 456, 506, 829, 948, 966 |
| BseYI | CCCAGC | 1 cut(s) | 253 |
| BsgI | GTGCAG | 3 cut(s) | 58, 463, 955 |
| Bsh1285I | CGRYCG | 1 cut(s) | 349 |
| BshVI | ATCGAT | 1 cut(s) | 517 |
| BsiEI | CGRYCG | 1 cut(s) | 349 |
| BsiHKAI | GWGCWC | 2 cut(s) | 263, 706 |
| BsiSI | CCGG | 2 cut(s) | 267, 892 |
| Bsp1286I | GDGCHC | 2 cut(s) | 263, 706 |
| Bsp13I | TCCGGA | 1 cut(s) | 266 |
| Bsp143I | GATC | 2 cut(s) | 316, 1089 |
| Bsp19I | CCATGG | 1 cut(s) | 671 |
| BspACI | CCGC | 9 cut(s) | 32, 135, 349, 352, 362, 437, 447, 698, 973 |
| BspCNI | CTCAG | 2 cut(s) | 432, 502 |
| BspDI | ATCGAT | 1 cut(s) | 517 |
| BspEI | TCCGGA | 1 cut(s) | 266 |
| BspLI | GGNNCC | 2 cut(s) | 271, 409 |
| BspMAI | CTGCAG | 1 cut(s) | 826 |
| BspMI | ACCTGC | 3 cut(s) | 80, 799, 815 |
| BsrDI | GCAATG | 2 cut(s) | 450, 845 |
| BsrI | ACTGG | 1 cut(s) | 286 |
| BssECI | CCNNGG | 2 cut(s) | 657, 671 |
| BssMI | GATC | 2 cut(s) | 316, 1089 |
| BssNI | GRCGYC | 1 cut(s) | 167 |
| BssT1I | CCWWGG | 2 cut(s) | 657, 671 |
| Bst4CI | ACNGT | 1 cut(s) | 990 |
| Bst6I | CTCTTC | 1 cut(s) | 1046 |
| BstACI | GRCGYC | 1 cut(s) | 167 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 81 |
| BstC8I | GCNNGC | 4 cut(s) | 82, 216, 442, 588 |
| BstDEI | CTNAG | 5 cut(s) | 419, 467, 480, 510, 707 |
| BstDSI | CCRYGG | 1 cut(s) | 671 |
| BstF5I | GGATG | 3 cut(s) | 146, 578, 981 |
| BstH2I | RGCGCY | 1 cut(s) | 370 |
| BstHHI | GCGC | 2 cut(s) | 129, 369 |
| BstKTI | GATC | 2 cut(s) | 319, 1092 |
| BstMBI | GATC | 2 cut(s) | 316, 1089 |
| BstMCI | CGRYCG | 1 cut(s) | 349 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 81, 126, 211, 710, 764, 905, 979 |
| BstNSI | RCATGY | 2 cut(s) | 84, 747 |
| BstSFI | CTRYAG | 1 cut(s) | 822 |
| BstV1I | GCAGC | 7 cut(s) | 86, 376, 456, 506, 829, 948, 966 |
| BstV2I | GAAGAC | 1 cut(s) | 165 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 812 |
| Bsu15I | ATCGAT | 1 cut(s) | 517 |
| BsuTUI | ATCGAT | 1 cut(s) | 517 |
| BtgI | CCRYGG | 1 cut(s) | 671 |
| BtrI | CACGTC | 1 cut(s) | 49 |
| BtsCI | GGATG | 3 cut(s) | 146, 578, 981 |
| BtsI | GCAGTG | 1 cut(s) | 906 |
| BtsIMutI | CAGTG | 4 cut(s) | 279, 792, 906, 995 |
| BveI | ACCTGC | 3 cut(s) | 80, 799, 815 |
| Cac8I | GCNNGC | 4 cut(s) | 82, 216, 442, 588 |
| CfoI | GCGC | 2 cut(s) | 129, 369 |
| Cfr13I | GGNCC | 2 cut(s) | 407, 827 |
| ClaI | ATCGAT | 1 cut(s) | 517 |
| CseI | GACGC | 1 cut(s) | 220 |
| Csp6I | GTAC | 2 cut(s) | 571, 986 |
| CviAII | CATG | 4 cut(s) | 81, 85, 672, 744 |
| CviQI | GTAC | 2 cut(s) | 571, 986 |
| DdeI | CTNAG | 5 cut(s) | 419, 467, 480, 510, 707 |
| DpnI | GATC | 2 cut(s) | 318, 1091 |
| DpnII | GATC | 2 cut(s) | 316, 1089 |
| Eam1104I | CTCTTC | 1 cut(s) | 1046 |
| EarI | CTCTTC | 1 cut(s) | 1046 |
| EciI | GGCGGA | 2 cut(s) | 124, 988 |
| Ecl136II | GAGCTC | 2 cut(s) | 261, 704 |
| Eco130I | CCWWGG | 2 cut(s) | 657, 671 |
| Eco24I | GRGCYC | 2 cut(s) | 263, 706 |
| Eco47I | GGWCC | 2 cut(s) | 407, 827 |
| Eco47III | AGCGCT | 1 cut(s) | 368 |
| Eco53kI | GAGCTC | 2 cut(s) | 261, 704 |
| Eco57I | CTGAAG | 2 cut(s) | 233, 376 |
| EcoICRI | GAGCTC | 2 cut(s) | 261, 704 |
| EcoRI | GAATTC | 4 cut(s) | 153, 628, 788, 1004 |
| EcoT14I | CCWWGG | 2 cut(s) | 657, 671 |
| EcoT22I | ATGCAT | 1 cut(s) | 86 |
| EcoT38I | GRGCYC | 2 cut(s) | 263, 706 |
| ErhI | CCWWGG | 2 cut(s) | 657, 671 |
| FaeI | CATG | 4 cut(s) | 84, 88, 675, 747 |
| FatI | CATG | 4 cut(s) | 80, 84, 671, 743 |
| FauI | CCCGC | 2 cut(s) | 369, 691 |
| FauNDI | CATATG | 1 cut(s) | 1071 |
| FokI | GGATG | 3 cut(s) | 133, 565, 988 |
| FriOI | GRGCYC | 2 cut(s) | 263, 706 |
| FspBI | CTAG | 2 cut(s) | 27, 93 |
| GlaI | GCGC | 2 cut(s) | 128, 368 |
| GsaI | CCCAGC | 1 cut(s) | 257 |
| HaeII | RGCGCY | 1 cut(s) | 370 |
| HapII | CCGG | 2 cut(s) | 267, 892 |
| HgaI | GACGC | 1 cut(s) | 220 |
| HhaI | GCGC | 2 cut(s) | 129, 369 |
| Hin1I | GRCGYC | 1 cut(s) | 167 |
| Hin1II | CATG | 4 cut(s) | 84, 88, 675, 747 |
| Hin6I | GCGC | 2 cut(s) | 127, 367 |
| HinP1I | GCGC | 2 cut(s) | 127, 367 |
| HinfI | GANTC | 3 cut(s) | 232, 322, 818 |
| HpaII | CCGG | 2 cut(s) | 267, 892 |
| HphI | GGTGA | 2 cut(s) | 674, 827 |
| Hpy166II | GTNNAC | 2 cut(s) | 67, 830 |
| Hpy188I | TCNGA | 4 cut(s) | 321, 395, 422, 1136 |
| Hpy188III | TCNNGA | 7 cut(s) | 150, 267, 326, 383, 614, 1001, 1009 |
| Hpy8I | GTNNAC | 2 cut(s) | 67, 830 |
| Hpy99I | CGWCG | 5 cut(s) | 50, 169, 172, 202, 301 |
| HpyAV | CCTTC | 2 cut(s) | 550, 898 |
| HpyCH4III | ACNGT | 1 cut(s) | 990 |
| HpyCH4IV | ACGT | 4 cut(s) | 48, 167, 862, 1082 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 81, 126, 211, 710, 764, 905, 979 |
| HpyF3I | CTNAG | 5 cut(s) | 419, 467, 480, 510, 707 |
| HpySE526I | ACGT | 4 cut(s) | 48, 167, 862, 1082 |
| Hsp92I | GRCGYC | 1 cut(s) | 167 |
| Hsp92II | CATG | 4 cut(s) | 84, 88, 675, 747 |
| HspAI | GCGC | 2 cut(s) | 127, 367 |
| Kpn2I | TCCGGA | 1 cut(s) | 266 |
| Kzo9I | GATC | 2 cut(s) | 316, 1089 |
| LmnI | GCTCC | 4 cut(s) | 258, 269, 701, 1027 |
| Lsp1109I | GCAGC | 7 cut(s) | 86, 376, 456, 506, 829, 948, 966 |
| LweI | GCATC | 3 cut(s) | 192, 523, 966 |
| MaeI | CTAG | 2 cut(s) | 27, 93 |
| MaeII | ACGT | 4 cut(s) | 48, 167, 862, 1082 |
| MalI | GATC | 2 cut(s) | 318, 1091 |
| MboI | GATC | 2 cut(s) | 316, 1089 |
| MboII | GAAGA | 3 cut(s) | 165, 239, 1063 |
| MhlI | GDGCHC | 2 cut(s) | 263, 706 |
| MlyI | GAGTC | 2 cut(s) | 316, 827 |
| MnlI | CCTC | 6 cut(s) | 142, 269, 295, 561, 1037, 1047 |
| Mph1103I | ATGCAT | 1 cut(s) | 86 |
| MroI | TCCGGA | 1 cut(s) | 266 |
| MroXI | GAANNNNTTC | 1 cut(s) | 532 |
| MseI | TTAA | 3 cut(s) | 635, 726, 1085 |
| MspA1I | CMGCKG | 3 cut(s) | 253, 447, 497 |
| MspI | CCGG | 2 cut(s) | 267, 892 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 81, 126, 211, 710, 764, 905, 979 |
| NcoI | CCATGG | 1 cut(s) | 671 |
| NdeI | CATATG | 1 cut(s) | 1071 |
| NdeII | GATC | 2 cut(s) | 316, 1089 |
| NlaIII | CATG | 4 cut(s) | 84, 88, 675, 747 |
| NlaIV | GGNNCC | 2 cut(s) | 271, 409 |
| NsiI | ATGCAT | 1 cut(s) | 86 |
| NspI | RCATGY | 2 cut(s) | 84, 747 |
| PaeI | GCATGC | 1 cut(s) | 84 |
| PaqCI | CACCTGC | 1 cut(s) | 80 |
| PciI | ACATGT | 1 cut(s) | 743 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 173 |
| PdmI | GAANNNNTTC | 1 cut(s) | 532 |
| PfeI | GAWTC | 1 cut(s) | 232 |
| PflFI | GACNNNGTC | 1 cut(s) | 169 |
| PleI | GAGTC | 2 cut(s) | 316, 826 |
| PpsI | GAGTC | 2 cut(s) | 316, 826 |
| PscI | ACATGT | 1 cut(s) | 743 |
| Psp124BI | GAGCTC | 2 cut(s) | 263, 706 |
| PspFI | CCCAGC | 1 cut(s) | 253 |
| PspN4I | GGNNCC | 2 cut(s) | 271, 409 |
| PspPI | GGNCC | 2 cut(s) | 407, 827 |
| PstI | CTGCAG | 1 cut(s) | 826 |
| PsyI | GACNNNGTC | 1 cut(s) | 169 |
| PvuII | CAGCTG | 2 cut(s) | 253, 497 |
| RsaI | GTAC | 2 cut(s) | 572, 987 |
| RsaNI | GTAC | 2 cut(s) | 571, 986 |
| SacI | GAGCTC | 2 cut(s) | 263, 706 |
| SaqAI | TTAA | 3 cut(s) | 635, 726, 1085 |
| Sau3AI | GATC | 2 cut(s) | 316, 1089 |
| Sau96I | GGNCC | 2 cut(s) | 407, 827 |
| SchI | GAGTC | 2 cut(s) | 316, 827 |
| SduI | GDGCHC | 2 cut(s) | 263, 706 |
| SfaNI | GCATC | 3 cut(s) | 192, 523, 966 |
| SfcI | CTRYAG | 1 cut(s) | 822 |
| SinI | GGWCC | 2 cut(s) | 407, 827 |
| SpeI | ACTAGT | 1 cut(s) | 26 |
| SphI | GCATGC | 1 cut(s) | 84 |
| SsiI | CCGC | 9 cut(s) | 32, 135, 349, 352, 362, 437, 447, 698, 973 |
| SspMI | CTAG | 2 cut(s) | 27, 93 |
| SstI | GAGCTC | 2 cut(s) | 263, 706 |
| StyI | CCWWGG | 2 cut(s) | 657, 671 |
| TaaI | ACNGT | 1 cut(s) | 990 |
| TaiI | ACGT | 4 cut(s) | 51, 170, 865, 1085 |
| TaqI | TCGA | 5 cut(s) | 315, 327, 384, 517, 597 |
| TauI | GCSGC | 3 cut(s) | 354, 440, 450 |
| TfiI | GAWTC | 1 cut(s) | 232 |
| Tru1I | TTAA | 3 cut(s) | 635, 726, 1085 |
| Tru9I | TTAA | 3 cut(s) | 635, 726, 1085 |
| TscAI | CASTG | 4 cut(s) | 286, 799, 906, 995 |
| TseI | GCWGC | 7 cut(s) | 99, 364, 444, 494, 842, 936, 979 |
| TspDTI | ATGAA | 4 cut(s) | 245, 390, 801, 1064 |
| TspGWI | ACGGA | 3 cut(s) | 314, 420, 572 |
| TspRI | CASTG | 4 cut(s) | 286, 799, 906, 995 |
| Tth111I | GACNNNGTC | 1 cut(s) | 169 |
| VpaK11BI | GGWCC | 2 cut(s) | 407, 827 |
| XceI | RCATGY | 2 cut(s) | 84, 747 |
| XmnI | GAANNNNTTC | 1 cut(s) | 532 |
| XspI | CTAG | 2 cut(s) | 27, 93 |
| ZraI | GACGTC | 1 cut(s) | 168 |
| Zsp2I | ATGCAT | 1 cut(s) | 86 |