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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g21880 |
| rosa_chinensis | RchiOBHm_Chr7g0191851 RchiOBHm_Chr7g0202241 |
| rosa_multiflora | Rmu_sc0001659.1_g000041 |
| rosa_roxburghii | Rroxscaffold_7G00195000 |
| rosa_rugosa | Rorug02G0274000 |
| rosa_samantha | Rh1AG274500 Rh1BG200400 Rh1DG069000 Rh2BG228500 Rh2CG233000 Rh3BG311900 Rh4AG236300 Rh4BG146100 Rh5AG221300 Rh5AG392900 Rh5BG251600 Rh5CG382600 Rh5CG532400 Rh6BG243100 Rh7CG368700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 322 |
| AclWI | GGATC | 2 cut(s) | 185, 198 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 2 cut(s) | 156, 204 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 322 |
| AgsI | TTSAA | 4 cut(s) | 34, 302, 338, 449 |
| AjnI | CCWGG | 2 cut(s) | 150, 321 |
| AluBI | AGCT | 1 cut(s) | 229 |
| AluI | AGCT | 1 cut(s) | 229 |
| Alw21I | GWGCWC | 1 cut(s) | 276 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| AlwI | GGATC | 2 cut(s) | 185, 198 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 322 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 226 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 297 |
| AspS9I | GGNCC | 1 cut(s) | 431 |
| AsuHPI | GGTGA | 1 cut(s) | 391 |
| AvaII | GGWCC | 1 cut(s) | 431 |
| BaeGI | GKGCMC | 1 cut(s) | 25 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 190 |
| Bbv12I | GWGCWC | 1 cut(s) | 276 |
| BbvI | GCAGC | 1 cut(s) | 238 |
| BccI | CCATC | 1 cut(s) | 404 |
| BciT130I | CCWGG | 2 cut(s) | 152, 323 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BisI | GCNGC | 1 cut(s) | 227 |
| BlsI | GCNGC | 1 cut(s) | 228 |
| Bme1390I | CCNGG | 2 cut(s) | 152, 323 |
| Bme18I | GGWCC | 1 cut(s) | 431 |
| BmgT120I | GGNCC | 1 cut(s) | 431 |
| BmiI | GGNNCC | 1 cut(s) | 192 |
| BmrFI | CCNGG | 2 cut(s) | 152, 323 |
| BpuEI | CTTGAG | 1 cut(s) | 315 |
| BsaAI | YACGTR | 1 cut(s) | 235 |
| BsaBI | GATNNNNATC | 1 cut(s) | 33 |
| BsaI | GGTCTC | 1 cut(s) | 141 |
| BsaJI | CCNNGG | 2 cut(s) | 306, 322 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 322 |
| Bse1I | ACTGG | 1 cut(s) | 316 |
| Bse8I | GATNNNNATC | 1 cut(s) | 33 |
| BseBI | CCWGG | 2 cut(s) | 152, 323 |
| BseDI | CCNNGG | 2 cut(s) | 306, 322 |
| BseJI | GATNNNNATC | 1 cut(s) | 33 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 322 |
| BseNI | ACTGG | 1 cut(s) | 316 |
| BseSI | GKGCMC | 1 cut(s) | 25 |
| BseXI | GCAGC | 1 cut(s) | 238 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiHKAI | GWGCWC | 1 cut(s) | 276 |
| BslFI | GGGAC | 1 cut(s) | 340 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 322 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsmFI | GGGAC | 1 cut(s) | 340 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bso31I | GGTCTC | 1 cut(s) | 141 |
| Bsp1286I | GDGCHC | 2 cut(s) | 25, 276 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 1 cut(s) | 192 |
| BspPI | GGATC | 2 cut(s) | 185, 198 |
| BspTNI | GGTCTC | 1 cut(s) | 141 |
| BsrI | ACTGG | 1 cut(s) | 316 |
| BssECI | CCNNGG | 2 cut(s) | 306, 322 |
| BssMI | GATC | 1 cut(s) | 190 |
| BssT1I | CCWWGG | 1 cut(s) | 306 |
| Bst2UI | CCWGG | 2 cut(s) | 152, 323 |
| Bst4CI | ACNGT | 1 cut(s) | 126 |
| Bst6I | CTCTTC | 2 cut(s) | 135, 242 |
| BstBAI | YACGTR | 1 cut(s) | 235 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstNI | CCWGG | 2 cut(s) | 152, 323 |
| BstSCI | CCNGG | 2 cut(s) | 150, 321 |
| BstSLI | GKGCMC | 1 cut(s) | 25 |
| BstSNI | TACGTA | 1 cut(s) | 235 |
| BstV1I | GCAGC | 1 cut(s) | 238 |
| BstX2I | RGATCY | 1 cut(s) | 190 |
| BstYI | RGATCY | 1 cut(s) | 190 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| CaiI | CAGNNNCTG | 1 cut(s) | 322 |
| Cfr13I | GGNCC | 1 cut(s) | 431 |
| CviAII | CATG | 3 cut(s) | 26, 54, 164 |
| CviJI | RGCY | 7 cut(s) | 5, 134, 229, 262, 315, 382, 457 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 134, 229, 262, 315, 382, 457 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 135, 242 |
| EarI | CTCTTC | 2 cut(s) | 135, 242 |
| Eco105I | TACGTA | 1 cut(s) | 235 |
| Eco130I | CCWWGG | 1 cut(s) | 306 |
| Eco31I | GGTCTC | 1 cut(s) | 141 |
| Eco47I | GGWCC | 1 cut(s) | 431 |
| Eco57I | CTGAAG | 2 cut(s) | 156, 204 |
| EcoO109I | RGGNCCY | 1 cut(s) | 431 |
| EcoRII | CCWGG | 2 cut(s) | 150, 321 |
| EcoT14I | CCWWGG | 1 cut(s) | 306 |
| ErhI | CCWWGG | 1 cut(s) | 306 |
| FaeI | CATG | 3 cut(s) | 29, 57, 167 |
| FaiI | YATR | 6 cut(s) | 27, 48, 55, 165, 196, 198 |
| FaqI | GGGAC | 1 cut(s) | 340 |
| FatI | CATG | 3 cut(s) | 25, 53, 163 |
| Fnu4HI | GCNGC | 1 cut(s) | 227 |
| Fsp4HI | GCNGC | 1 cut(s) | 227 |
| GluI | GCNGC | 1 cut(s) | 227 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 29, 57, 167 |
| HinfI | GANTC | 1 cut(s) | 328 |
| HphI | GGTGA | 1 cut(s) | 391 |
| Hpy188I | TCNGA | 1 cut(s) | 99 |
| Hpy188III | TCNNGA | 1 cut(s) | 377 |
| HpyCH4III | ACNGT | 1 cut(s) | 126 |
| HpyCH4IV | ACGT | 1 cut(s) | 234 |
| HpySE526I | ACGT | 1 cut(s) | 234 |
| Hsp92II | CATG | 3 cut(s) | 29, 57, 167 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LpnPI | CCDG | 7 cut(s) | 137, 164, 308, 329, 335, 390, 455 |
| Lsp1109I | GCAGC | 1 cut(s) | 238 |
| MaeII | ACGT | 1 cut(s) | 234 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 6 cut(s) | 149, 152, 152, 226, 259, 365 |
| MfeI | CAATTG | 1 cut(s) | 366 |
| MflI | RGATCY | 1 cut(s) | 190 |
| MhlI | GDGCHC | 2 cut(s) | 25, 276 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 366, 390 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 322 |
| MmeI | TCCRAC | 1 cut(s) | 434 |
| MnlI | CCTC | 3 cut(s) | 93, 353, 444 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 1 cut(s) | 297 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MslI | CAYNNNNRTG | 1 cut(s) | 162 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspR9I | CCNGG | 2 cut(s) | 152, 323 |
| MunI | CAATTG | 1 cut(s) | 366 |
| MvaI | CCWGG | 2 cut(s) | 152, 323 |
| NdeII | GATC | 1 cut(s) | 190 |
| NlaIII | CATG | 3 cut(s) | 29, 57, 167 |
| NlaIV | GGNNCC | 1 cut(s) | 192 |
| PdmI | GAANNNNTTC | 1 cut(s) | 297 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 322 |
| PkrI | GCNGC | 1 cut(s) | 228 |
| PleI | GAGTC | 1 cut(s) | 322 |
| PpsI | GAGTC | 1 cut(s) | 322 |
| Ppu21I | YACGTR | 1 cut(s) | 235 |
| PpuMI | RGGWCCY | 1 cut(s) | 431 |
| Psp5II | RGGWCCY | 1 cut(s) | 431 |
| Psp6I | CCWGG | 2 cut(s) | 150, 321 |
| PspGI | CCWGG | 2 cut(s) | 150, 321 |
| PspN4I | GGNNCC | 1 cut(s) | 192 |
| PspPI | GGNCC | 1 cut(s) | 431 |
| PspPPI | RGGWCCY | 1 cut(s) | 431 |
| PstNI | CAGNNNCTG | 1 cut(s) | 322 |
| PsuI | RGATCY | 1 cut(s) | 190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 162 |
| SatI | GCNGC | 1 cut(s) | 227 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| Sau96I | GGNCC | 1 cut(s) | 431 |
| SchI | GAGTC | 1 cut(s) | 322 |
| ScrFI | CCNGG | 2 cut(s) | 152, 323 |
| SduI | GDGCHC | 2 cut(s) | 25, 276 |
| SetI | ASST | 8 cut(s) | 64, 153, 231, 237, 287, 312, 433, 444 |
| SinI | GGWCC | 1 cut(s) | 431 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 162 |
| SmlI | CTYRAG | 1 cut(s) | 330 |
| SmoI | CTYRAG | 1 cut(s) | 330 |
| SnaBI | TACGTA | 1 cut(s) | 235 |
| Sse9I | AATT | 2 cut(s) | 366, 390 |
| StyD4I | CCNGG | 2 cut(s) | 150, 321 |
| StyI | CCWWGG | 1 cut(s) | 306 |
| TaaI | ACNGT | 1 cut(s) | 126 |
| TaiI | ACGT | 1 cut(s) | 237 |
| TaqI | TCGA | 3 cut(s) | 88, 222, 388 |
| TasI | AATT | 2 cut(s) | 366, 390 |
| TseI | GCWGC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 1 cut(s) | 152 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 322 |
| VpaK11BI | GGWCC | 1 cut(s) | 431 |
| XmnI | GAANNNNTTC | 1 cut(s) | 297 |