No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g21880 |
| rosa_chinensis | RchiOBHm_Chr7g0191851 RchiOBHm_Chr7g0202241 |
| rosa_multiflora | Rmu_sc0001659.1_g000041 |
| rosa_roxburghii | Rroxscaffold_7G00195000 |
| rosa_rugosa | Rorug02G0274000 |
| rosa_samantha | Rh1AG274500 Rh1BG200400 Rh1DG069000 Rh2BG228500 Rh2CG233000 Rh3BG311900 Rh4AG236300 Rh4BG146100 Rh5AG221300 Rh5AG392900 Rh5BG251600 Rh5CG382600 Rh5CG532400 Rh6BG243100 Rh7CG368700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 26 |
| AclWI | GGATC | 1 cut(s) | 80 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AgsI | TTSAA | 2 cut(s) | 55, 237 |
| AluBI | AGCT | 2 cut(s) | 58, 156 |
| AluI | AGCT | 2 cut(s) | 58, 156 |
| Alw26I | GTCTC | 1 cut(s) | 235 |
| AlwI | GGATC | 1 cut(s) | 80 |
| AoxI | GGCC | 1 cut(s) | 23 |
| ApeKI | GCWGC | 1 cut(s) | 153 |
| AspS9I | GGNCC | 1 cut(s) | 23 |
| BbvI | GCAGC | 1 cut(s) | 165 |
| BcoDI | GTCTC | 1 cut(s) | 235 |
| BisI | GCNGC | 2 cut(s) | 26, 154 |
| BlsI | GCNGC | 2 cut(s) | 27, 155 |
| BmgT120I | GGNCC | 1 cut(s) | 23 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| Bse1I | ACTGG | 1 cut(s) | 249 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseNI | ACTGG | 1 cut(s) | 249 |
| BseXI | GCAGC | 1 cut(s) | 165 |
| BshFI | GGCC | 1 cut(s) | 25 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BsmAI | GTCTC | 1 cut(s) | 235 |
| BsnI | GGCC | 1 cut(s) | 25 |
| Bsp143I | GATC | 1 cut(s) | 85 |
| BspACI | CCGC | 1 cut(s) | 26 |
| BspANI | GGCC | 1 cut(s) | 25 |
| BspHI | TCATGA | 3 cut(s) | 186, 208, 271 |
| BspPI | GGATC | 1 cut(s) | 80 |
| BsrI | ACTGG | 1 cut(s) | 249 |
| BssMI | GATC | 1 cut(s) | 85 |
| BstC8I | GCNNGC | 2 cut(s) | 60, 176 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 104 |
| BstKTI | GATC | 1 cut(s) | 88 |
| BstMAI | GTCTC | 1 cut(s) | 235 |
| BstMBI | GATC | 1 cut(s) | 85 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 22, 55 |
| BstV1I | GCAGC | 1 cut(s) | 165 |
| BsuRI | GGCC | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 2 cut(s) | 60, 176 |
| CciI | TCATGA | 3 cut(s) | 186, 208, 271 |
| Cfr13I | GGNCC | 1 cut(s) | 23 |
| CviAII | CATG | 3 cut(s) | 187, 209, 272 |
| CviJI | RGCY | 7 cut(s) | 25, 49, 58, 98, 111, 156, 178 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 49, 58, 98, 111, 156, 178 |
| DpnI | GATC | 1 cut(s) | 87 |
| DpnII | GATC | 1 cut(s) | 85 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 104 |
| FaeI | CATG | 3 cut(s) | 190, 212, 275 |
| FaiI | YATR | 9 cut(s) | 66, 84, 133, 188, 204, 210, 252, 261, 273 |
| FatI | CATG | 3 cut(s) | 186, 208, 271 |
| Fnu4HI | GCNGC | 2 cut(s) | 26, 154 |
| Fsp4HI | GCNGC | 2 cut(s) | 26, 154 |
| GluI | GCNGC | 2 cut(s) | 26, 154 |
| HaeIII | GGCC | 1 cut(s) | 25 |
| Hin1II | CATG | 3 cut(s) | 190, 212, 275 |
| HindIII | AAGCTT | 1 cut(s) | 56 |
| HinfI | GANTC | 1 cut(s) | 39 |
| Hpy188III | TCNNGA | 3 cut(s) | 187, 209, 272 |
| HpyAV | CCTTC | 1 cut(s) | 29 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 22, 55 |
| Hsp92II | CATG | 3 cut(s) | 190, 212, 275 |
| Kzo9I | GATC | 1 cut(s) | 85 |
| LpnPI | CCDG | 5 cut(s) | 31, 92, 142, 160, 230 |
| Lsp1109I | GCAGC | 1 cut(s) | 165 |
| MalI | GATC | 1 cut(s) | 87 |
| MboI | GATC | 1 cut(s) | 85 |
| MluCI | AATT | 1 cut(s) | 199 |
| MnlI | CCTC | 2 cut(s) | 99, 194 |
| MseI | TTAA | 1 cut(s) | 102 |
| MslI | CAYNNNNRTG | 1 cut(s) | 276 |
| MspA1I | CMGCKG | 2 cut(s) | 28, 156 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 22, 55 |
| NdeII | GATC | 1 cut(s) | 85 |
| NlaIII | CATG | 3 cut(s) | 190, 212, 275 |
| PagI | TCATGA | 3 cut(s) | 186, 208, 271 |
| PfeI | GAWTC | 1 cut(s) | 39 |
| PkrI | GCNGC | 2 cut(s) | 27, 155 |
| PspPI | GGNCC | 1 cut(s) | 23 |
| PvuII | CAGCTG | 1 cut(s) | 156 |
| RseI | CAYNNNNRTG | 1 cut(s) | 276 |
| SaqAI | TTAA | 1 cut(s) | 102 |
| SatI | GCNGC | 2 cut(s) | 26, 154 |
| Sau3AI | GATC | 1 cut(s) | 85 |
| Sau96I | GGNCC | 1 cut(s) | 23 |
| SetI | ASST | 4 cut(s) | 60, 76, 158, 186 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 276 |
| Sse9I | AATT | 1 cut(s) | 199 |
| SsiI | CCGC | 1 cut(s) | 26 |
| TasI | AATT | 1 cut(s) | 199 |
| TauI | GCSGC | 1 cut(s) | 28 |
| TfiI | GAWTC | 1 cut(s) | 39 |
| Tru1I | TTAA | 1 cut(s) | 102 |
| Tru9I | TTAA | 1 cut(s) | 102 |
| TseI | GCWGC | 1 cut(s) | 153 |
| TspDTI | ATGAA | 4 cut(s) | 48, 203, 248, 260 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 104 |