pycom15g28360
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
24168136 .. 24168996
861 bp
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UTR
Exon/CDS
Intron
pycom15g28360.3

Sequence Viewer

Length: 255 bp
ATGGTGTTGTTGAAAATGGAGTTGGTCTTTGCAGTTTTAGTGTGGGCTTGCTTACAGTCTTTTGTACTGCCTGATTCACAAGGAGATGCACTGTTTTCATTAAGGACTTCTTTGAATAGTTCACCCAATCAGCTCAAGGACTGGAACCAGAACCAAGTCAATCCATGCACTTGGTCCAATGTGAATTGCGACTCTAACTATAATGTCGTTTCTAATCTTGTCAAATATTGGATTTTCTGGCATCTTGTCTCCTAA

Protein Analysis

85

Amino Acids

9.68

Weight (kDa)

5.45

Isoelectric Point (pI)

46.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 66
AgsI TTSAA 2 cut(s) 13, 115
AjuI GAANNNNNNNTTGG 1 cut(s) 37
AluBI AGCT 1 cut(s) 133
AluI AGCT 1 cut(s) 133
AspS9I GGNCC 1 cut(s) 174
AsuHPI GGTGA 1 cut(s) 114
AvaII GGWCC 1 cut(s) 174
Bme18I GGWCC 1 cut(s) 174
BmgT120I GGNCC 1 cut(s) 174
BmiI GGNNCC 1 cut(s) 146
BmsI GCATC 2 cut(s) 76, 250
BpuEI CTTGAG 1 cut(s) 119
Bse1I ACTGG 1 cut(s) 146
BseNI ACTGG 1 cut(s) 146
BspLI GGNNCC 1 cut(s) 146
BsrI ACTGG 1 cut(s) 146
Bst4CI ACNGT 2 cut(s) 57, 93
BstC8I GCNNGC 1 cut(s) 49
BstXI CCANNNNNNTGG 1 cut(s) 171
BtsIMutI CAGTG 1 cut(s) 89
Cac8I GCNNGC 1 cut(s) 49
Cfr13I GGNCC 1 cut(s) 174
Csp6I GTAC 1 cut(s) 65
CviAII CATG 1 cut(s) 165
CviJI RGCY 2 cut(s) 47, 133
CviKI_1 RGCY 2 cut(s) 47, 133
CviQI GTAC 1 cut(s) 65
Eco47I GGWCC 1 cut(s) 174
FaeI CATG 1 cut(s) 168
FaiI YATR 2 cut(s) 166, 201
FalI AAGNNNNNCTT 2 cut(s) 94, 126
FatI CATG 1 cut(s) 164
Hin1II CATG 1 cut(s) 168
HinfI GANTC 2 cut(s) 74, 191
HphI GGTGA 1 cut(s) 114
Hpy166II GTNNAC 1 cut(s) 122
Hpy8I GTNNAC 1 cut(s) 122
HpyCH4III ACNGT 2 cut(s) 57, 93
HpyCH4V TGCA 3 cut(s) 32, 89, 168
Hsp92II CATG 1 cut(s) 168
LpnPI CCDG 4 cut(s) 84, 127, 161, 223
LweI GCATC 2 cut(s) 76, 250
MluCI AATT 1 cut(s) 184
MlyI GAGTC 1 cut(s) 185
MseI TTAA 1 cut(s) 101
NlaIII CATG 1 cut(s) 168
NlaIV GGNNCC 1 cut(s) 146
PfeI GAWTC 1 cut(s) 74
PleI GAGTC 1 cut(s) 185
PpsI GAGTC 1 cut(s) 185
PspN4I GGNNCC 1 cut(s) 146
PspPI GGNCC 1 cut(s) 174
RsaI GTAC 1 cut(s) 66
RsaNI GTAC 1 cut(s) 65
SaqAI TTAA 1 cut(s) 101
Sau96I GGNCC 1 cut(s) 174
SchI GAGTC 1 cut(s) 185
SetI ASST 1 cut(s) 135
SfaNI GCATC 2 cut(s) 76, 250
SinI GGWCC 1 cut(s) 174
SmlI CTYRAG 1 cut(s) 134
SmoI CTYRAG 1 cut(s) 134
Sse9I AATT 1 cut(s) 184
SspI AATATT 1 cut(s) 227
TaaI ACNGT 2 cut(s) 57, 93
TasI AATT 1 cut(s) 184
TatI WGTACW 1 cut(s) 64
TfiI GAWTC 1 cut(s) 74
Tru1I TTAA 1 cut(s) 101
Tru9I TTAA 1 cut(s) 101
TscAI CASTG 1 cut(s) 96
TspDTI ATGAA 1 cut(s) 87
TspRI CASTG 1 cut(s) 96
VpaK11BI GGWCC 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.