pycom15g28430
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
24333892 .. 24336284
2393 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g28430.1

Sequence Viewer

Length: 1305 bp
ATGGGTCAAATACCTGAGCAGCTGTTTAGTGTCAAAACATACAATTTTACAAGAAACCACCTAAACTGTGGCGTGATTCTCCCTCACCTTTGTAAAACTGATATTTATGGTTCAGGCGCTAAAAGTAAGCCGAAGCTTGGAATCATAGTTGGACTTCTTGTGGGGCTTACCATTTTATTATTACTTGGAGGTTTACTGTACTTTACCGGCAAGCGTAGACACAAAGGCTTCAAGCGTGAAGTTTTTGAGGATGTTGCAGGTGACCAAAGGATTGCATTTGGCCAGTTAATAAGATTTTCATGGAGGGAACTGCAGCTAGCAACAGACAACTTCAGTGAGAAACATGTTCTAGGACAGGGAGGTTTTGGAAAAGTCTATAAAGGAGTGCTATCTGATAACACAGAAGTTGCTGTTAAGCGTCTCACTGATTATGAGAGACCTAGGGGTGATGCAGCTTTCCAGCACGAAGTTGAAATGATAAGTGTAGCTGTTCACAGGAATCTATTAAGACTGATCGGATTTTGCACGACTCCAACAGAACGCCTTCTTGTGTATCCCTTTATGCAGAATTTAAGTGTTGCCGATCGGTTGCGAGAGATTAAACCTGGTGAGCCCGTCTTAGATTGGCCTACAAGAAGGCAGGTGGCATTAGGCACAGCCCGTGGGTTAGAGTACCTGCACGAACATTGTAATCCTAAGATTATTCATCGAGATGTTAAGGCTGCTAATGTATTACTTGATGAAGATTTTGAAGCAGTTGTTGGCAACTTTGGCTTGGCAAAGTTGGTGGATGTTAGAAAGACTAATGTGACAACTCAAGTTCGTGGCACAATGGGTCACATAGCACCTGAATATTTCTCCACTGGGAAGTCATCAGAAAAGACGGATGTTTTTGGCTATGGGATTATGCTTTTAGAACTTGTAACAGGACAACGGACAGTTGATTTTTCATGCTTGGAAGAAGATGATGATCTTTTTTTGCTTGACCATGTCAAAAAGCTGGAAAGGGAAAAGAGACTGGATGCTATTGTAGATAGAAATTTGAATGATAGTTTCAACGTCCAAGAGGTAGAAATGATGATCAAAGTTGCGCTTCTTTGTACGCAAGGATCCCCTGAAGACCACCCATTAATGTCGGGCGTGGTACGGATGCTAGAAGGGGATGGTCTGGCCGAGCGCTGGGAAGAATGGCAGAATGTTGAGGTTACTCGTAGGCAACAGAATGAAAGACTACAAAGGAGATTTAACCAAGGAGAAGATTCTGTATGTAATCAGGATGCTATTAAGTTATTTGGTGAACGTTGA

Protein Analysis

435

Amino Acids

49.27

Weight (kDa)

6.48

Isoelectric Point (pI)

30.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 112 - 314 2.8e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 114 - 343 9.5e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 248, 631
Acc36I ACCTGC 3 cut(s) 248, 631, 684
AccI GTMKAC 1 cut(s) 217
AclI AACGTT 1 cut(s) 1300
AclWI GGATC 2 cut(s) 1104, 1117
AcoI YGGCCR 2 cut(s) 280, 1170
AcsI RAATTY 2 cut(s) 568, 1039
AcuI CTGAAG 2 cut(s) 316, 1137
AfaI GTAC 4 cut(s) 200, 674, 1102, 1146
AfeI AGCGCT 1 cut(s) 1178
AfiI CCNNNNNNNGG 2 cut(s) 137, 1179
AflIII ACRYGT 1 cut(s) 343
AgsI TTSAA 5 cut(s) 232, 473, 752, 1045, 1057
AjnI CCWGG 1 cut(s) 604
AjuI GAANNNNNNNTTGG 2 cut(s) 744, 776
AluBI AGCT 6 cut(s) 22, 136, 316, 455, 488, 1000
AluI AGCT 6 cut(s) 22, 136, 316, 455, 488, 1000
Alw26I GTCTC 3 cut(s) 425, 430, 1009
AlwI GGATC 2 cut(s) 1104, 1117
Aor51HI AGCGCT 1 cut(s) 1178
AoxI GGCC 3 cut(s) 280, 626, 1170
ApeKI GCWGC 4 cut(s) 19, 313, 452, 722
ApoI RAATTY 2 cut(s) 568, 1039
AseI ATTAAT 1 cut(s) 1130
Asp700I GAANNNNTTC 1 cut(s) 543
AspA2I CCTAGG 1 cut(s) 440
AspLEI GCGC 3 cut(s) 119, 1093, 1179
AsuHPI GGTGA 4 cut(s) 77, 272, 458, 620
AsuNHI GCTAGC 1 cut(s) 316
AvrII CCTAGG 1 cut(s) 440
BalI TGGCCA 1 cut(s) 282
BamHI GGATCC 1 cut(s) 1109
BanII GRGCYC 1 cut(s) 615
BbsI GAAGAC 1 cut(s) 1125
BbvI GCAGC 4 cut(s) 31, 325, 464, 709
BccI CCATC 1 cut(s) 1157
BciT130I CCWGG 1 cut(s) 606
BciVI GTATCC 1 cut(s) 564
BclI TGATCA 1 cut(s) 1080
BcoDI GTCTC 3 cut(s) 425, 430, 1009
BfaI CTAG 4 cut(s) 317, 350, 441, 1154
BfmI CTRYAG 1 cut(s) 311
BfoI RGCGCY 2 cut(s) 120, 1180
BfuAI ACCTGC 3 cut(s) 248, 631, 684
BfuI GTATCC 1 cut(s) 564
BisI GCNGC 4 cut(s) 20, 314, 453, 723
BlnI CCTAGG 1 cut(s) 440
BlsI GCNGC 4 cut(s) 21, 315, 454, 724
Bme1390I CCNGG 1 cut(s) 606
BmiI GGNNCC 1 cut(s) 1111
BmrFI CCNGG 1 cut(s) 606
BmrI ACTGGG 1 cut(s) 873
BmsI GCATC 4 cut(s) 439, 1012, 1140, 1267
BmtI GCTAGC 1 cut(s) 320
BmuI ACTGGG 1 cut(s) 873
BpiI GAAGAC 1 cut(s) 1125
Bpu10I CCTNAGC 1 cut(s) 15
BpuEI CTTGAG 1 cut(s) 801
BsaBI GATNNNNATC 1 cut(s) 969
BsaI GGTCTC 1 cut(s) 430
BsaJI CCNNGG 3 cut(s) 440, 661, 1249
Bsc4I CCNNNNNNNGG 2 cut(s) 137, 1179
Bse118I RCCGGY 1 cut(s) 206
Bse1I ACTGG 3 cut(s) 283, 868, 1023
Bse8I GATNNNNATC 1 cut(s) 969
BseBI CCWGG 1 cut(s) 606
BseDI CCNNGG 3 cut(s) 440, 661, 1249
BseGI GGATG 7 cut(s) 256, 796, 892, 1027, 1155, 1168, 1282
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 2 cut(s) 137, 1179
BseMII CTCAG 1 cut(s) 6
BseNI ACTGG 3 cut(s) 283, 868, 1023
BseXI GCAGC 4 cut(s) 31, 325, 464, 709
BseYI CCCAGC 1 cut(s) 1179
BsgI GTGCAG 1 cut(s) 662
Bsh1285I CGRYCG 1 cut(s) 586
BshFI GGCC 3 cut(s) 282, 628, 1172
BsiEI CGRYCG 1 cut(s) 586
BsiSI CCGG 1 cut(s) 207
BslI CCNNNNNNNGG 2 cut(s) 137, 1179
BsmAI GTCTC 3 cut(s) 425, 430, 1009
BsmBI CGTCTC 1 cut(s) 425
BsnI GGCC 3 cut(s) 282, 628, 1172
Bso31I GGTCTC 1 cut(s) 430
Bsp1286I GDGCHC 1 cut(s) 615
Bsp143I GATC 5 cut(s) 513, 583, 970, 1080, 1109
BspANI GGCC 3 cut(s) 282, 628, 1172
BspCNI CTCAG 1 cut(s) 7
BspLI GGNNCC 1 cut(s) 1111
BspMAI CTGCAG 1 cut(s) 315
BspMI ACCTGC 3 cut(s) 248, 631, 684
BspOI GCTAGC 1 cut(s) 320
BspPI GGATC 2 cut(s) 1104, 1117
BspTNI GGTCTC 1 cut(s) 430
BsrFI RCCGGY 1 cut(s) 206
BsrI ACTGG 3 cut(s) 283, 868, 1023
BssAI RCCGGY 1 cut(s) 206
BssECI CCNNGG 3 cut(s) 440, 661, 1249
BssMI GATC 5 cut(s) 513, 583, 970, 1080, 1109
BssT1I CCWWGG 2 cut(s) 440, 1249
Bst2UI CCWGG 1 cut(s) 606
Bst4CI ACNGT 3 cut(s) 68, 198, 940
BstC8I GCNNGC 2 cut(s) 212, 318
BstDEI CTNAG 3 cut(s) 15, 619, 696
BstDSI CCRYGG 1 cut(s) 661
BstEII GGTNACC 1 cut(s) 260
BstF5I GGATG 7 cut(s) 256, 796, 892, 1027, 1155, 1168, 1282
BstH2I RGCGCY 2 cut(s) 120, 1180
BstHHI GCGC 3 cut(s) 119, 1093, 1179
BstKTI GATC 5 cut(s) 516, 586, 973, 1083, 1112
BstMAI GTCTC 3 cut(s) 425, 430, 1009
BstMBI GATC 5 cut(s) 513, 583, 970, 1080, 1109
BstMCI CGRYCG 1 cut(s) 586
BstMWI GCNNNNNNNGC 1 cut(s) 771
BstNI CCWGG 1 cut(s) 606
BstNSI RCATGY 1 cut(s) 347
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 1 cut(s) 604
BstSFI CTRYAG 1 cut(s) 311
BstV1I GCAGC 4 cut(s) 31, 325, 464, 709
BstV2I GAAGAC 1 cut(s) 1125
BstX2I RGATCY 1 cut(s) 1109
BstYI RGATCY 1 cut(s) 1109
BsuI GTATCC 1 cut(s) 564
BsuRI GGCC 3 cut(s) 282, 628, 1172
BtgI CCRYGG 1 cut(s) 661
BtsCI GGATG 7 cut(s) 256, 796, 892, 1027, 1155, 1168, 1282
BtsIMutI CAGTG 3 cut(s) 340, 423, 861
BveI ACCTGC 3 cut(s) 248, 631, 684
Cac8I GCNNGC 2 cut(s) 212, 318
CfoI GCGC 3 cut(s) 119, 1093, 1179
Cfr10I RCCGGY 1 cut(s) 206
CseI GACGC 1 cut(s) 407
CsiI ACCWGGT 1 cut(s) 604
Csp6I GTAC 4 cut(s) 199, 673, 1101, 1145
CspCI CAANNNNNGTGG 2 cut(s) 768, 803
CviAII CATG 4 cut(s) 300, 344, 951, 989
CviQI GTAC 4 cut(s) 199, 673, 1101, 1145
DdeI CTNAG 3 cut(s) 15, 619, 696
DpnI GATC 5 cut(s) 515, 585, 972, 1082, 1111
DpnII GATC 5 cut(s) 513, 583, 970, 1080, 1109
EaeI YGGCCR 2 cut(s) 280, 1170
Eco130I CCWWGG 2 cut(s) 440, 1249
Eco24I GRGCYC 1 cut(s) 615
Eco31I GGTCTC 1 cut(s) 430
Eco47III AGCGCT 1 cut(s) 1178
Eco57I CTGAAG 2 cut(s) 316, 1137
Eco91I GGTNACC 1 cut(s) 260
EcoO65I GGTNACC 1 cut(s) 260
EcoRII CCWGG 1 cut(s) 604
EcoT14I CCWWGG 2 cut(s) 440, 1249
EcoT38I GRGCYC 1 cut(s) 615
ErhI CCWWGG 2 cut(s) 440, 1249
Esp3I CGTCTC 1 cut(s) 425
FaeI CATG 4 cut(s) 303, 347, 954, 992
FalI AAGNNNNNCTT 2 cut(s) 1077, 1109
FatI CATG 4 cut(s) 299, 343, 950, 988
FbaI TGATCA 1 cut(s) 1080
FblI GTMKAC 1 cut(s) 217
Fnu4HI GCNGC 4 cut(s) 20, 314, 453, 723
FokI GGATG 7 cut(s) 263, 803, 899, 1034, 1162, 1175, 1289
FriOI GRGCYC 1 cut(s) 615
Fsp4HI GCNGC 4 cut(s) 20, 314, 453, 723
FspBI CTAG 4 cut(s) 317, 350, 441, 1154
GlaI GCGC 3 cut(s) 118, 1092, 1178
GluI GCNGC 4 cut(s) 20, 314, 453, 723
GsaI CCCAGC 1 cut(s) 1183
HaeII RGCGCY 2 cut(s) 120, 1180
HaeIII GGCC 3 cut(s) 282, 628, 1172
HapII CCGG 1 cut(s) 207
HgaI GACGC 1 cut(s) 407
HhaI GCGC 3 cut(s) 119, 1093, 1179
Hin1II CATG 4 cut(s) 303, 347, 954, 992
Hin6I GCGC 3 cut(s) 117, 1091, 1177
HinP1I GCGC 3 cut(s) 117, 1091, 1177
HindIII AAGCTT 1 cut(s) 134
HinfI GANTC 5 cut(s) 76, 141, 499, 529, 1259
HpaII CCGG 1 cut(s) 207
HphI GGTGA 4 cut(s) 77, 272, 458, 620
Hpy166II GTNNAC 4 cut(s) 194, 218, 493, 1298
Hpy188I TCNGA 3 cut(s) 394, 518, 877
Hpy188III TCNNGA 2 cut(s) 710, 1274
Hpy8I GTNNAC 4 cut(s) 194, 218, 493, 1298
HpyAV CCTTC 3 cut(s) 554, 630, 1151
HpyCH4III ACNGT 3 cut(s) 68, 198, 940
HpyCH4IV ACGT 2 cut(s) 1059, 1300
HpyCH4V TGCA 7 cut(s) 257, 275, 313, 452, 525, 565, 679
HpyF10VI GCNNNNNNNGC 1 cut(s) 771
HpyF3I CTNAG 3 cut(s) 15, 619, 696
HpySE526I ACGT 2 cut(s) 1059, 1300
Hsp92II CATG 4 cut(s) 303, 347, 954, 992
HspAI GCGC 3 cut(s) 117, 1091, 1177
Ksp22I TGATCA 1 cut(s) 1080
Kzo9I GATC 5 cut(s) 513, 583, 970, 1080, 1109
Lsp1109I GCAGC 4 cut(s) 31, 325, 464, 709
LweI GCATC 4 cut(s) 439, 1012, 1140, 1267
MabI ACCWGGT 1 cut(s) 604
MaeI CTAG 4 cut(s) 317, 350, 441, 1154
MaeII ACGT 2 cut(s) 1059, 1300
MaeIII GTNAC 5 cut(s) 260, 808, 836, 922, 1204
MalI GATC 5 cut(s) 515, 585, 972, 1082, 1111
MboI GATC 5 cut(s) 513, 583, 970, 1080, 1109
MboII GAAGA 6 cut(s) 755, 971, 974, 1130, 1196, 1268
MflI RGATCY 1 cut(s) 1109
MhlI GDGCHC 1 cut(s) 615
MlsI TGGCCA 1 cut(s) 282
MluCI AATT 3 cut(s) 43, 568, 1039
MluNI TGGCCA 1 cut(s) 282
MlyI GAGTC 1 cut(s) 523
MmeI TCCRAC 2 cut(s) 130, 557
MnlI CCTC 7 cut(s) 93, 182, 241, 297, 353, 1060, 1195
Mox20I TGGCCA 1 cut(s) 282
MroXI GAANNNNTTC 1 cut(s) 543
MscI TGGCCA 1 cut(s) 282
MseI TTAA 9 cut(s) 287, 414, 506, 572, 600, 717, 1130, 1245, 1284
MslI CAYNNNNRTG 1 cut(s) 711
Msp20I TGGCCA 1 cut(s) 282
MspA1I CMGCKG 1 cut(s) 22
MspI CCGG 1 cut(s) 207
MspR9I CCNGG 1 cut(s) 606
MvaI CCWGG 1 cut(s) 606
MwoI GCNNNNNNNGC 1 cut(s) 771
NdeII GATC 5 cut(s) 513, 583, 970, 1080, 1109
NheI GCTAGC 1 cut(s) 316
NlaIII CATG 4 cut(s) 303, 347, 954, 992
NlaIV GGNNCC 1 cut(s) 1111
NmeAIII GCCGAG 1 cut(s) 1198
NmuCI GTSAC 3 cut(s) 260, 808, 836
NspI RCATGY 1 cut(s) 347
PaqCI CACCTGC 2 cut(s) 248, 631
PciI ACATGT 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 543
PfeI GAWTC 4 cut(s) 76, 141, 499, 1259
PflFI GACNNNGTC 1 cut(s) 989
PkrI GCNGC 4 cut(s) 21, 315, 454, 724
Ple19I CGATCG 1 cut(s) 586
PleI GAGTC 1 cut(s) 523
PpsI GAGTC 1 cut(s) 523
PscI ACATGT 1 cut(s) 343
PshBI ATTAAT 1 cut(s) 1130
Psp1406I AACGTT 1 cut(s) 1300
Psp6I CCWGG 1 cut(s) 604
PspEI GGTNACC 1 cut(s) 260
PspFI CCCAGC 1 cut(s) 1179
PspGI CCWGG 1 cut(s) 604
PspN4I GGNNCC 1 cut(s) 1111
PstI CTGCAG 1 cut(s) 315
PsuI RGATCY 1 cut(s) 1109
PsyI GACNNNGTC 1 cut(s) 989
PvuI CGATCG 1 cut(s) 586
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 4 cut(s) 200, 674, 1102, 1146
RsaNI GTAC 4 cut(s) 199, 673, 1101, 1145
RseI CAYNNNNRTG 1 cut(s) 711
SaqAI TTAA 9 cut(s) 287, 414, 506, 572, 600, 717, 1130, 1245, 1284
SatI GCNGC 4 cut(s) 20, 314, 453, 723
Sau3AI GATC 5 cut(s) 513, 583, 970, 1080, 1109
SchI GAGTC 1 cut(s) 523
ScrFI CCNGG 1 cut(s) 606
SduI GDGCHC 1 cut(s) 615
SexAI ACCWGGT 1 cut(s) 604
SfaNI GCATC 4 cut(s) 439, 1012, 1140, 1267
SfcI CTRYAG 1 cut(s) 311
SmiMI CAYNNNNRTG 1 cut(s) 711
SmlI CTYRAG 1 cut(s) 816
SmoI CTYRAG 1 cut(s) 816
Sse9I AATT 3 cut(s) 43, 568, 1039
SspI AATATT 1 cut(s) 854
SspMI CTAG 4 cut(s) 317, 350, 441, 1154
StyD4I CCNGG 1 cut(s) 604
StyI CCWWGG 2 cut(s) 440, 1249
TaaI ACNGT 3 cut(s) 68, 198, 940
TaiI ACGT 2 cut(s) 1062, 1303
TaqI TCGA 1 cut(s) 709
TasI AATT 3 cut(s) 43, 568, 1039
TatI WGTACW 1 cut(s) 198
TfiI GAWTC 4 cut(s) 76, 141, 499, 1259
Tru1I TTAA 9 cut(s) 287, 414, 506, 572, 600, 717, 1130, 1245, 1284
Tru9I TTAA 9 cut(s) 287, 414, 506, 572, 600, 717, 1130, 1245, 1284
TscAI CASTG 3 cut(s) 340, 430, 868
TseFI GTSAC 3 cut(s) 260, 808, 836
TseI GCWGC 4 cut(s) 19, 313, 452, 722
Tsp45I GTSAC 3 cut(s) 260, 808, 836
TspDTI ATGAA 5 cut(s) 288, 695, 756, 939, 1239
TspGWI ACGGA 3 cut(s) 899, 949, 1162
TspRI CASTG 3 cut(s) 340, 430, 868
Tth111I GACNNNGTC 1 cut(s) 989
VspI ATTAAT 1 cut(s) 1130
XapI RAATTY 2 cut(s) 568, 1039
XceI RCATGY 1 cut(s) 347
XcmI CCANNNNNNNNNTGG 1 cut(s) 65
XmaJI CCTAGG 1 cut(s) 440
XmiI GTMKAC 1 cut(s) 217
XmnI GAANNNNTTC 1 cut(s) 543
XspI CTAG 4 cut(s) 317, 350, 441, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.