Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002426

Physical Location & Seq

Genomic Coordinates Reverse (-)

17128464 .. 17130741

Gene Structure 2278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0183900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGTTCAACATCGCTCAAAATGGTACTTATCTGGTACGCCTACATTTCTTAGCCTTTTCTTCCACCTCAAGTGATCTCTCCACAGCTGTTTTTGATGTTTTGGATTCTACGAATTTCACACTGTTGAACAATTTCACTGCCAAGAATAGTACTAGTTCTCCTTTGATAAAGGAGTTCTTTCTCAGAATCAATACTACTGACTCATTTAGACTGTATTTTACACCCCGGACATCATCTTTGGCATTTGTAAATGCCATTGAATTCTTAGCCATCCCTTCAGATTTCACCAACTTCATTCCTGAGAATTACACCAGTAATTTCCATTTACAGAAAATTTACAGAGTGAATGTTGGGGGCCCTTCACAAAATGATACATTGTGGAGAAGCTGGGAAACAGATGACACTTACCTGCCTGATCCAAACTCTGCTAAGGAAAGCAACAAAGGTACCCTTGGTAGTAGAATTTACAACGGAGAAATTGATGGTTTGGTTGCATCTAATGAGTCTGTTGCCCCGGATTGGGTTTACCAGACTGCTAAAGTACTGATGAATATCACTGCTAGCGGGCCAGCCAATTCCTCCAACATAACTTGGTCTTTTAGAGTGAGTGGGAATGCTAGACACATTGTCCGGGCTCACTTCTGTGACATTATTGGTTCGCCGCCTGGTAACATTAGATTTAACTTGTATTCAAACGGCAACTTCCGCAAGGAGATCGGCGGCATTTCTCAATCTGTTCCTTTCTACTATGACTTCGTGGTGAATTCTAGTGAGTTTGAACTCATTAACATCAGCATAGGACCTAGGAATGATTCTTGGGAACAAAATGCATATCTAAATGGTCTGGAAATATTGGAGATAGTGGAGGGATTAGCTCCAATTCCTAATGTGAGAGAGTCCAAGAAGAATATTGTGGCTCCTGTGGTTGGTTCAGTTCTTGGAGGCCTGTCACTCATCTGCGTTTTAATAGTTGGATTTGTGTTCGGTTTCAGACACACAAAGGCGAAAAAACGTGTGGAAACTTCAGTTTGGTCACCAATGCCTGCAAATGGAGGAGGGAGTTCTCACGGCTCCCCTCTCAATCTTAATTATCTTGGGTTGAAGATATCTTTTAATGAAATTCAGTCTGCAACAAACAACTTTAACACAAAGTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGGATTCTCTTGAATGGTACAAAAGTGGCTGTGAAGCGAGCTTATAAGCGAGATGAGCATGGATCAGGTTCAGGCCAAGGTCTCCCAGAATTCGAAACAGAAATCATAGTGTTGTCGAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTATTGTAATGAAAGGTCTGAGATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGATCATTTGTATGATTCGGATGTGCCTCGCTTGTCATGGAAGCAAAGACTTGAAATTTGTACTGGTGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGGGAATCATTCACCGTGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTAGCCAAAGTTGCAGATTTTGGCCTTTCGAGATCTGGAGCTCTCGATGAAACGCATGTCAGCACCAATGTTAAAGGCACTTTTGGTTATCTTGATCCTGAGTACATGATGTCTGAACAGTTGACAGAAAAATCTGATGTTTACTCATTTGGTGTAGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCTATTGATCCAACGCTTCCAAGAGAGCAAATGAACTTGGCTGAATGGGGAATGCTTTGCCAGAAAAGAGGGCTGCTTGAAGAGATTGTTGATTCTCCACTAAAGGGTCAGATTGATCCTAACTCACTGCGTAAGTTTGGTGAGACGGTTGAGAAGTGTTTGCAAGAAGATGCATGTGATAGGCCAACAATGGCTGATGTGCTGTGGGATTTGGAGTATGCATTACAGCTTCAGCAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACAACCATTGATGCTTCATCAGCAGCATTCGCTTTGCCAAATGTTCAGCGTTTTCCTTCACTTGGTTTGACGAGGAATGGAGATGATATCAGGGAAGCTGACTTGGAGACGACAGAAAGTGAAATTTTCTCTCAATTGAAAATTGGTGATGCCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

727

Amino Acids

80.65

Weight (kDa)

5.68

Isoelectric Point (pI)

40.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	2 - 286	4e-16	Malectin-like domain
Pkinase	PF00069	383 - 653	9.2e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	385 - 654	5.3e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10290 AT5G10290 AT5G65240 AT5G65240
fragaria_vesca	FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640
malus_domestica	MD01G1032200.v1.1 MD15G1322900.v1.1 MD15G1323000.v1.1
prunus_persica	Prupe.6G189000_v2.0.a1 Prupe.6G189000_v2.0.a1
pyrus_communis	pycom01g05940 pycom15g28350 pycom15g28360 pycom15g28370 pycom15g28410 pycom15g28430
rosa_chinensis	RchiOBHm_Chr2g0113091
rosa_laevigata	RLG00000018037
rosa_multiflora	Rmu_sc0005949.1_g000009 Rmu_sc0018337.1_g000002 Rmu_sc0034368.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130900
rosa_rugosa	Rorug02G0183900 Rorug02G0184000 Rorug02G0184100 Rorug02G0184200 Rorug02G0184300 Rorug02G0184400 Rorug02G0184500 Rorug02G0184600
rosa_samantha	Rh2AG239000 Rh2BG252700 Rh2CG243200 Rh2DG247100
rosa_wichuraiana	Rw2G018740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1236
Acc36I	ACCTGC	1 cut(s)	417
Acc65I	GGTACC	1 cut(s)	446
AccB1I	GGYRCC	1 cut(s)	446
AciI	CCGC	6 cut(s)	564, 662, 706, 720, 1315, 1321
AclWI	GGATC	5 cut(s)	410, 1261, 1658, 1757, 1865
AcsI	RAATTY	9 cut(s)	112, 260, 333, 462, 763, 1119, 1280, 1461, 2148
AcuI	CTGAAG	3 cut(s)	261, 1008, 1970
AfaI	GTAC	8 cut(s)	25, 36, 151, 448, 543, 1210, 1468, 1673
AfiI	CCNNNNNNNGG	6 cut(s)	519, 520, 926, 1049, 1859, 2087
AflIII	ACRYGT	1 cut(s)	1012
AhdI	GACNNNNNGTC	1 cut(s)	626
AhlI	ACTAGT	2 cut(s)	152, 1372
AjnI	CCWGG	1 cut(s)	664
AleI	CACNNNNGTG	2 cut(s)	642, 1503
Alw21I	GWGCWC	1 cut(s)	1612
Alw26I	GTCTC	4 cut(s)	1277, 1336, 1892, 2126
AlwI	GGATC	5 cut(s)	410, 1261, 1658, 1757, 1865
AoxI	GGCC	6 cut(s)	355, 566, 943, 1264, 1591, 1937
ApaI	GGGCCC	1 cut(s)	359
ApeKI	GCWGC	4 cut(s)	1475, 1508, 1828, 2048
ApoI	RAATTY	9 cut(s)	112, 260, 333, 462, 763, 1119, 1280, 1461, 2148
ArsI	GACNNNNNNTTYG	4 cut(s)	220, 252, 1446, 1478
Asp700I	GAANNNNTTC	1 cut(s)	131
Asp718I	GGTACC	1 cut(s)	446
AspA2I	CCTAGG	1 cut(s)	803
AspS9I	GGNCC	4 cut(s)	355, 356, 566, 800
AsuC2I	CCSGG	3 cut(s)	226, 515, 632
AsuHPI	GGTGA	7 cut(s)	277, 772, 1026, 1168, 1517, 1907, 2183
AsuII	TTCGAA	1 cut(s)	1284
AsuNHI	GCTAGC	1 cut(s)	560
AvaII	GGWCC	1 cut(s)	800
AvrII	CCTAGG	1 cut(s)	803
BaeGI	GKGCMC	1 cut(s)	359
BaeI	ACNNNNGTAYC	6 cut(s)	430, 463, 1200, 1233, 1361, 1394
BanI	GGYRCC	1 cut(s)	446
BanII	GRGCYC	3 cut(s)	359, 637, 1612
BbsI	GAAGAC	1 cut(s)	1478
Bbv12I	GWGCWC	1 cut(s)	1612
BbvI	GCAGC	4 cut(s)	1487, 1520, 1815, 2060
BccI	CCATC	3 cut(s)	278, 476, 1332
BceAI	ACGGC	2 cut(s)	712, 1084
BcgI	CGANNNNNNTGC	2 cut(s)	697, 731
BciT130I	CCWGG	1 cut(s)	666
BcnI	CCSGG	3 cut(s)	226, 515, 632
BcoDI	GTCTC	4 cut(s)	1277, 1336, 1892, 2126
BcuI	ACTAGT	2 cut(s)	152, 1372
BfaI	CTAG	6 cut(s)	153, 561, 618, 768, 804, 1373
BfuAI	ACCTGC	1 cut(s)	417
BglII	AGATCT	1 cut(s)	1601
BisI	GCNGC	6 cut(s)	662, 721, 1476, 1509, 1829, 2049
BlnI	CCTAGG	1 cut(s)	803
BlsI	GCNGC	6 cut(s)	663, 722, 1477, 1510, 1830, 2050
BmcAI	AGTACT	2 cut(s)	151, 543
Bme1390I	CCNGG	4 cut(s)	226, 515, 632, 666
Bme18I	GGWCC	1 cut(s)	800
BmeRI	GACNNNNNGTC	1 cut(s)	626
BmgT120I	GGNCC	4 cut(s)	355, 356, 566, 800
BmiI	GGNNCC	5 cut(s)	356, 357, 448, 918, 1072
BmrFI	CCNGG	4 cut(s)	226, 515, 632, 666
BmsI	GCATC	4 cut(s)	503, 1915, 2026, 2164
BmtI	GCTAGC	1 cut(s)	564
BpiI	GAAGAC	1 cut(s)	1478
BplI	GAGNNNNNCTC	2 cut(s)	1182, 1214
BpmI	CTGGAG	1 cut(s)	1626
Bpu10I	CCTNAGC	1 cut(s)	429
Bpu14I	TTCGAA	1 cut(s)	1284
BpuEI	CTTGAG	1 cut(s)	52
BpuMI	CCSGG	3 cut(s)	226, 515, 632
BsaBI	GATNNNNATC	1 cut(s)	551
BsaI	GGTCTC	1 cut(s)	1277
BsaJI	CCNNGG	5 cut(s)	224, 451, 513, 803, 1267
BsaXI	ACNNNNNCTCC	2 cut(s)	142, 172
Bsc4I	CCNNNNNNNGG	6 cut(s)	519, 520, 926, 1049, 1859, 2087
Bse1I	ACTGG	2 cut(s)	312, 1474
Bse8I	GATNNNNATC	1 cut(s)	551
BseBI	CCWGG	1 cut(s)	666
BseDI	CCNNGG	5 cut(s)	224, 451, 513, 803, 1267
BseGI	GGATG	2 cut(s)	270, 1432
BseJI	GATNNNNATC	1 cut(s)	551
BseLI	CCNNNNNNNGG	6 cut(s)	519, 520, 926, 1049, 1859, 2087
BseMII	CTCAG	4 cut(s)	196, 291, 1353, 1659
BseNI	ACTGG	2 cut(s)	312, 1474
BseRI	GAGGAG	1 cut(s)	1068
BseSI	GKGCMC	1 cut(s)	359
BseXI	GCAGC	4 cut(s)	1487, 1520, 1815, 2060
BseYI	CCCAGC	2 cut(s)	387, 1511
BsgI	GTGCAG	2 cut(s)	1494, 1527
BshFI	GGCC	6 cut(s)	357, 568, 945, 1266, 1593, 1939
BshNI	GGYRCC	1 cut(s)	446
BsiHKAI	GWGCWC	1 cut(s)	1612
BsiSI	CCGG	3 cut(s)	226, 515, 631
BslFI	GGGAC	1 cut(s)	1411
BslI	CCNNNNNNNGG	6 cut(s)	519, 520, 926, 1049, 1859, 2087
BsmAI	GTCTC	4 cut(s)	1277, 1336, 1892, 2126
BsmBI	CGTCTC	2 cut(s)	1892, 2126
BsmFI	GGGAC	1 cut(s)	1411
BsmI	GAATGC	3 cut(s)	619, 1812, 2051
BsnI	GGCC	6 cut(s)	357, 568, 945, 1266, 1593, 1939
Bso31I	GGTCTC	1 cut(s)	1277
Bsp119I	TTCGAA	1 cut(s)	1284
Bsp120I	GGGCCC	1 cut(s)	355
Bsp1286I	GDGCHC	3 cut(s)	359, 637, 1612
Bsp143I	GATC	9 cut(s)	73, 415, 714, 1253, 1408, 1601, 1663, 1762, 1870
BspACI	CCGC	6 cut(s)	564, 662, 706, 720, 1315, 1321
BspANI	GGCC	6 cut(s)	357, 568, 945, 1266, 1593, 1939
BspCNI	CTCAG	4 cut(s)	195, 292, 1354, 1660
BspHI	TCATGA	1 cut(s)	2014
BspLI	GGNNCC	5 cut(s)	356, 357, 448, 918, 1072
BspMI	ACCTGC	1 cut(s)	417
BspOI	GCTAGC	1 cut(s)	564
BspPI	GGATC	5 cut(s)	410, 1261, 1658, 1757, 1865
BspT104I	TTCGAA	1 cut(s)	1284
BspT107I	GGYRCC	1 cut(s)	446
BspTNI	GGTCTC	1 cut(s)	1277
BsrI	ACTGG	2 cut(s)	312, 1474
BssECI	CCNNGG	5 cut(s)	224, 451, 513, 803, 1267
BssMI	GATC	9 cut(s)	73, 415, 714, 1253, 1408, 1601, 1663, 1762, 1870
BssT1I	CCWWGG	3 cut(s)	451, 803, 1267
Bst2UI	CCWGG	1 cut(s)	666
Bst4CI	ACNGT	5 cut(s)	123, 213, 1529, 1689, 1903
Bst6I	CTCTTC	1 cut(s)	1830
BstBI	TTCGAA	1 cut(s)	1284
BstC8I	GCNNGC	5 cut(s)	562, 566, 570, 1044, 1230
BstDEI	CTNAG	7 cut(s)	49, 182, 265, 300, 429, 1362, 1668
BstEII	GGTNACC	1 cut(s)	1032
BstF5I	GGATG	2 cut(s)	270, 1432
BstKTI	GATC	9 cut(s)	76, 418, 717, 1256, 1411, 1604, 1666, 1765, 1873
BstMAI	GTCTC	4 cut(s)	1277, 1336, 1892, 2126
BstMBI	GATC	9 cut(s)	73, 415, 714, 1253, 1408, 1601, 1663, 1762, 1870
BstMWI	GCNNNNNNNGC	6 cut(s)	705, 1246, 1580, 1754, 2045, 2054
BstNI	CCWGG	1 cut(s)	666
BstNSI	RCATGY	2 cut(s)	1628, 1932
BstPI	GGTNACC	1 cut(s)	1032
BstSCI	CCNGG	4 cut(s)	224, 513, 630, 664
BstSLI	GKGCMC	1 cut(s)	359
BstV1I	GCAGC	4 cut(s)	1487, 1520, 1815, 2060
BstV2I	GAAGAC	1 cut(s)	1478
BstX2I	RGATCY	1 cut(s)	1601
BstYI	RGATCY	1 cut(s)	1601
BsuRI	GGCC	6 cut(s)	357, 568, 945, 1266, 1593, 1939
BtsCI	GGATG	2 cut(s)	270, 1432
BtsI	GCAGTG	3 cut(s)	135, 555, 1880
BtsIMutI	CAGTG	4 cut(s)	119, 135, 555, 1880
BveI	ACCTGC	1 cut(s)	417
Cac8I	GCNNGC	5 cut(s)	562, 566, 570, 1044, 1230
CciI	TCATGA	1 cut(s)	2014
Cfr13I	GGNCC	4 cut(s)	355, 356, 566, 800
Csp6I	GTAC	8 cut(s)	24, 35, 150, 447, 542, 1209, 1467, 1672
CviAII	CATG	8 cut(s)	1250, 1387, 1443, 1568, 1625, 1675, 1929, 2015
CviQI	GTAC	8 cut(s)	24, 35, 150, 447, 542, 1209, 1467, 1672
DdeI	CTNAG	7 cut(s)	49, 182, 265, 300, 429, 1362, 1668
DpnI	GATC	9 cut(s)	75, 417, 716, 1255, 1410, 1603, 1665, 1764, 1872
DpnII	GATC	9 cut(s)	73, 415, 714, 1253, 1408, 1601, 1663, 1762, 1870
DriI	GACNNNNNGTC	1 cut(s)	626
Eam1104I	CTCTTC	1 cut(s)	1830
Eam1105I	GACNNNNNGTC	1 cut(s)	626
EarI	CTCTTC	1 cut(s)	1830
EciI	GGCGGA	1 cut(s)	1304
Ecl136II	GAGCTC	1 cut(s)	1610
Eco130I	CCWWGG	3 cut(s)	451, 803, 1267
Eco147I	AGGCCT	1 cut(s)	945
Eco24I	GRGCYC	3 cut(s)	359, 637, 1612
Eco31I	GGTCTC	1 cut(s)	1277
Eco32I	GATATC	2 cut(s)	1107, 2113
Eco47I	GGWCC	1 cut(s)	800
Eco53kI	GAGCTC	1 cut(s)	1610
Eco57I	CTGAAG	3 cut(s)	261, 1008, 1970
Eco91I	GGTNACC	1 cut(s)	1032
EcoICRI	GAGCTC	1 cut(s)	1610
EcoO109I	RGGNCCY	3 cut(s)	355, 356, 800
EcoO65I	GGTNACC	1 cut(s)	1032
EcoRI	GAATTC	3 cut(s)	260, 763, 1280
EcoRII	CCWGG	1 cut(s)	664
EcoRV	GATATC	2 cut(s)	1107, 2113
EcoT14I	CCWWGG	3 cut(s)	451, 803, 1267
EcoT22I	ATGCAT	3 cut(s)	832, 1930, 1978
EcoT38I	GRGCYC	3 cut(s)	359, 637, 1612
ErhI	CCWWGG	3 cut(s)	451, 803, 1267
Esp3I	CGTCTC	2 cut(s)	1892, 2126
FaeI	CATG	8 cut(s)	1253, 1390, 1446, 1571, 1628, 1678, 1932, 2018
FalI	AAGNNNNNCTT	6 cut(s)	161, 193, 435, 467, 1157, 1189
FaqI	GGGAC	1 cut(s)	1411
FatI	CATG	8 cut(s)	1249, 1386, 1442, 1567, 1624, 1674, 1928, 2014
FauI	CCCGC	1 cut(s)	557
Fnu4HI	GCNGC	6 cut(s)	662, 721, 1476, 1509, 1829, 2049
FokI	GGATG	2 cut(s)	257, 1439
FriOI	GRGCYC	3 cut(s)	359, 637, 1612
Fsp4HI	GCNGC	6 cut(s)	662, 721, 1476, 1509, 1829, 2049
FspBI	CTAG	6 cut(s)	153, 561, 618, 768, 804, 1373
GluI	GCNGC	6 cut(s)	662, 721, 1476, 1509, 1829, 2049
GsaI	CCCAGC	2 cut(s)	391, 1515
GsuI	CTGGAG	1 cut(s)	1626
HaeIII	GGCC	6 cut(s)	357, 568, 945, 1266, 1593, 1939
HapII	CCGG	3 cut(s)	226, 515, 631
Hin1II	CATG	8 cut(s)	1253, 1390, 1446, 1571, 1628, 1678, 1932, 2018
HincII	GTYRAC	1 cut(s)	1692
HindII	GTYRAC	1 cut(s)	1692
HindIII	AAGCTT	1 cut(s)	2000
HpaII	CCGG	3 cut(s)	226, 515, 631
HphI	GGTGA	7 cut(s)	277, 772, 1026, 1168, 1517, 1907, 2183
Hpy166II	GTNNAC	4 cut(s)	526, 1542, 1692, 1711
Hpy188I	TCNGA	8 cut(s)	185, 280, 992, 1363, 1426, 1684, 1705, 1866
Hpy188III	TCNNGA	9 cut(s)	299, 845, 1201, 1599, 1605, 1613, 1661, 1667, 2015
Hpy8I	GTNNAC	4 cut(s)	526, 1542, 1692, 1711
HpyAV	CCTTC	3 cut(s)	285, 369, 2091
HpyCH4III	ACNGT	5 cut(s)	123, 213, 1529, 1689, 1903
HpyCH4IV	ACGT	2 cut(s)	1012, 1400
HpyF10VI	GCNNNNNNNGC	6 cut(s)	705, 1246, 1580, 1754, 2045, 2054
HpyF3I	CTNAG	7 cut(s)	49, 182, 265, 300, 429, 1362, 1668
HpySE526I	ACGT	2 cut(s)	1012, 1400
Hsp92II	CATG	8 cut(s)	1253, 1390, 1446, 1571, 1628, 1678, 1932, 2018
KpnI	GGTACC	1 cut(s)	450
Kzo9I	GATC	9 cut(s)	73, 415, 714, 1253, 1408, 1601, 1663, 1762, 1870
LmnI	GCTCC	4 cut(s)	880, 922, 1076, 1607
Lsp1109I	GCAGC	4 cut(s)	1487, 1520, 1815, 2060
LweI	GCATC	4 cut(s)	503, 1915, 2026, 2164
MaeI	CTAG	6 cut(s)	153, 561, 618, 768, 804, 1373
MaeII	ACGT	2 cut(s)	1012, 1400
MaeIII	GTNAC	4 cut(s)	644, 668, 948, 1032
MalI	GATC	9 cut(s)	75, 417, 716, 1255, 1410, 1603, 1665, 1764, 1872
MboI	GATC	9 cut(s)	73, 415, 714, 1253, 1408, 1601, 1663, 1762, 1870
MboII	GAAGA	6 cut(s)	51, 916, 1114, 1478, 1847, 1934
MfeI	CAATTG	1 cut(s)	2159
MflI	RGATCY	1 cut(s)	1601
MhlI	GDGCHC	3 cut(s)	359, 637, 1612
MlyI	GAGTC	3 cut(s)	194, 512, 905
MmeI	TCCRAC	3 cut(s)	606, 952, 1790
Mph1103I	ATGCAT	3 cut(s)	832, 1930, 1978
MroXI	GAANNNNTTC	1 cut(s)	131
MseI	TTAA	9 cut(s)	681, 786, 965, 1086, 1113, 1143, 1337, 1641, 2004
MslI	CAYNNNNRTG	4 cut(s)	642, 1416, 1503, 1530
MspA1I	CMGCKG	2 cut(s)	86, 1511
MspI	CCGG	3 cut(s)	226, 515, 631
MspR9I	CCNGG	4 cut(s)	226, 515, 632, 666
MunI	CAATTG	1 cut(s)	2159
Mva1269I	GAATGC	3 cut(s)	619, 1812, 2051
MvaI	CCWGG	1 cut(s)	666
MwoI	GCNNNNNNNGC	6 cut(s)	705, 1246, 1580, 1754, 2045, 2054
NciI	CCSGG	3 cut(s)	226, 515, 632
NdeII	GATC	9 cut(s)	73, 415, 714, 1253, 1408, 1601, 1663, 1762, 1870
NheI	GCTAGC	1 cut(s)	560
NlaIII	CATG	8 cut(s)	1253, 1390, 1446, 1571, 1628, 1678, 1932, 2018
NlaIV	GGNNCC	5 cut(s)	356, 357, 448, 918, 1072
NmuCI	GTSAC	3 cut(s)	644, 948, 1032
NsiI	ATGCAT	3 cut(s)	832, 1930, 1978
NspI	RCATGY	2 cut(s)	1628, 1932
NspV	TTCGAA	1 cut(s)	1284
OliI	CACNNNNGTG	2 cut(s)	642, 1503
PagI	TCATGA	1 cut(s)	2014
PceI	AGGCCT	1 cut(s)	945
PctI	GAATGC	3 cut(s)	619, 1812, 2051
PdmI	GAANNNNTTC	1 cut(s)	131
PfeI	GAWTC	7 cut(s)	104, 186, 812, 1195, 1421, 1518, 1847
PkrI	GCNGC	6 cut(s)	663, 722, 1477, 1510, 1830, 2050
PleI	GAGTC	3 cut(s)	194, 511, 904
PpsI	GAGTC	3 cut(s)	194, 511, 904
PpuMI	RGGWCCY	1 cut(s)	800
PsiI	TTATAA	1 cut(s)	1236
Psp124BI	GAGCTC	1 cut(s)	1612
Psp5II	RGGWCCY	1 cut(s)	800
Psp6I	CCWGG	1 cut(s)	664
PspEI	GGTNACC	1 cut(s)	1032
PspFI	CCCAGC	2 cut(s)	387, 1511
PspGI	CCWGG	1 cut(s)	664
PspN4I	GGNNCC	5 cut(s)	356, 357, 448, 918, 1072
PspOMI	GGGCCC	1 cut(s)	355
PspPI	GGNCC	4 cut(s)	355, 356, 566, 800
PspPPI	RGGWCCY	1 cut(s)	800
PsuI	RGATCY	1 cut(s)	1601
PvuII	CAGCTG	2 cut(s)	86, 1511
RsaI	GTAC	8 cut(s)	25, 36, 151, 448, 543, 1210, 1468, 1673
RsaNI	GTAC	8 cut(s)	24, 35, 150, 447, 542, 1209, 1467, 1672
RseI	CAYNNNNRTG	4 cut(s)	642, 1416, 1503, 1530
SacI	GAGCTC	1 cut(s)	1612
SaqAI	TTAA	9 cut(s)	681, 786, 965, 1086, 1113, 1143, 1337, 1641, 2004
SatI	GCNGC	6 cut(s)	662, 721, 1476, 1509, 1829, 2049
Sau3AI	GATC	9 cut(s)	73, 415, 714, 1253, 1408, 1601, 1663, 1762, 1870
Sau96I	GGNCC	4 cut(s)	355, 356, 566, 800
ScaI	AGTACT	2 cut(s)	151, 543
SchI	GAGTC	3 cut(s)	194, 512, 905
ScrFI	CCNGG	4 cut(s)	226, 515, 632, 666
SduI	GDGCHC	3 cut(s)	359, 637, 1612
SfaNI	GCATC	4 cut(s)	503, 1915, 2026, 2164
SfuI	TTCGAA	1 cut(s)	1284
SinI	GGWCC	1 cut(s)	800
SmiMI	CAYNNNNRTG	4 cut(s)	642, 1416, 1503, 1530
SmlI	CTYRAG	1 cut(s)	67
SmoI	CTYRAG	1 cut(s)	67
SpeI	ACTAGT	2 cut(s)	152, 1372
SseBI	AGGCCT	1 cut(s)	945
SsiI	CCGC	6 cut(s)	564, 662, 706, 720, 1315, 1321
SspI	AATATT	2 cut(s)	852, 910
SspMI	CTAG	6 cut(s)	153, 561, 618, 768, 804, 1373
SstI	GAGCTC	1 cut(s)	1612
StuI	AGGCCT	1 cut(s)	945
StyD4I	CCNGG	4 cut(s)	224, 513, 630, 664
StyI	CCWWGG	3 cut(s)	451, 803, 1267
TaaI	ACNGT	5 cut(s)	123, 213, 1529, 1689, 1903
TaiI	ACGT	2 cut(s)	1015, 1403
TaqI	TCGA	4 cut(s)	1284, 1307, 1598, 1614
TatI	WGTACW	4 cut(s)	149, 541, 1466, 1671
TauI	GCSGC	2 cut(s)	664, 723
TfiI	GAWTC	7 cut(s)	104, 186, 812, 1195, 1421, 1518, 1847
Tru1I	TTAA	9 cut(s)	681, 786, 965, 1086, 1113, 1143, 1337, 1641, 2004
Tru9I	TTAA	9 cut(s)	681, 786, 965, 1086, 1113, 1143, 1337, 1641, 2004
TscAI	CASTG	4 cut(s)	126, 142, 562, 1887
TseFI	GTSAC	3 cut(s)	644, 948, 1032
TseI	GCWGC	4 cut(s)	1475, 1508, 1828, 2048
Tsp45I	GTSAC	3 cut(s)	644, 948, 1032
TspGWI	ACGGA	1 cut(s)	486
TspRI	CASTG	4 cut(s)	126, 142, 562, 1887
VpaK11BI	GGWCC	1 cut(s)	800
XapI	RAATTY	9 cut(s)	112, 260, 333, 462, 763, 1119, 1280, 1461, 2148
XceI	RCATGY	2 cut(s)	1628, 1932
XmaJI	CCTAGG	1 cut(s)	803
XmnI	GAANNNNTTC	1 cut(s)	131
XspI	CTAG	6 cut(s)	153, 561, 618, 768, 804, 1373
ZrmI	AGTACT	2 cut(s)	151, 543
Zsp2I	ATGCAT	3 cut(s)	832, 1930, 1978

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.