Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002426

Physical Location & Seq

Genomic Coordinates Reverse (-)

17132788 .. 17136061

Gene Structure 3274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0184000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

ATGGAAAATCCTCATAATTGTAGAACCCTCCATATCCTTTTGTTTTCTCAGCTTGTTCTTCTCCTTCAGTTCTCATCCCTTCACTTTCTCTCTTTAGCTTATGAAGTCCAAGAAAAGTATTTCGTCAATTGTGGATCAGATGCTACTGTGGACCTCAATGGTCGGAATTTCACTGGGGATTTGAAGCCTGATTCCTTCTCTTTCTCAAAGGAAAGTGAGACTATCAAAGGCACCAACCTTACGATATCAAGTCTCTACCAGACAGCAAGAGTTTTCAGTCAACAATCCTACTACAATTTCGAAATCACTGAAACCGGTACTTATCTGGTACGCCTGCACTTCTTTCCCTTTTCTTCGGCCTCAAGTAATCTTTCTACTGGAATTTTTAATGTTTCGGATTCCAAGTTCACTCTGTTGAACAATTTCACTGCCAAGATCAATAGTACTAGCAACTCTGCTATAATAAAGGAATTCTTTCTTGGAATTAATAGTACTAGCAACTCATTTAAACTATATTTTACACCTCAAGCATCATCTTTTGCTTTTGTAAACGCCATTGAAGTCTTCCTTGCACCTTCAAATTTCACCCCTGAGAATCACAACAGTAATCTTCCTTTACACACAACTTACCGAGTGAATGTTGGAGGCACAGAGCTCTCACCAGATAATGACACAATATGGAGAAACTGGGAAACGGATGATATCTATCTGTCTGATCCAAACTCTGCGAAGGATGTCCCTTACAAACAAGTGCTTAATCACGAAATTAAGGATCAAGCTGATGATTTTGTTGCATCTACTAATTTTATTGCCCCGGATTTGGTTTACCAGACAGCTAAGGAGATGAATAGTACTACTAGCAGGCCAGCCAATTCCTCCAACATAACATGGTCTTTTAGTGTGAGCAGGAACGCTAGGCACATTGTCCGTGTACACTTCTGTGACATTGTTTCTGAGTCCTTTTATACTATAGTGTTTGACTTGTATTCGAATGGCAACTTCCGTAAGCAGATCGTTGGACGGGAGTCCCGTTTTGCTCTTGTGTTGGCTACTCCTTTCTACTATGATTTTGTGGTGAATGCTAGTGAGTCTAAACTCATTAACATCAGTATAGCCCCTAACATGAAGAATACAACAATTCCAAATGCCTTTCTGAATGGGTTGGAAATATTGGAGATATTGGAGGGAACAGCTCTAATTTATAATTTGGAAGAGTCCAAGAAGGTAAATGTGGCTCTTGTGGTTGGTTCAGTTCTTGGAGGAGGCCTGTTTCTTTTCATCATTGGATTCATGTTGTGTTTGAGACACAGAAAGGCGAAAAAGAGAAACAGAGGTGGGATTTCCCACAACCTTGGGTTGAAGATATCTTTTGCTCAAATCCGGTCTGCAACAAAAAACTTTGATCCGAAAATGCAGATAGGTGTGGGTGGTTTTGGGCATGTTTATAAAGGAACTCTCTCTAATGGCACCAAAGTGGCTGTGAAGCGTTGTAAGCAAGAGGGCCAAAGGTCAGGCCAAGGCCTTCCAGAATTTGAAACAGAAATCATAGTGTTGTCGAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTACTGTGATGAAGGGTCTGAGATGATACTAGTGTATGAGTTCATGGAAAAAGGGACCTTGAGAGATCATTTGTATGAATCGGATGTGCCTCGCTTGTCGTGGAAGCAAAGACTTGAAATTTGCATAGGTTCAGCAACTGGACTTGATTATCTCCATAAAGGTGCAGAAGGGGGCATCATCCACCGTGATGTGAAGTCCACCAACATATTGCTTGATGAGAACCTTGTTGCTAAAGTCGCTGACTTCGGGCTTTCGAGGTCTGGCCCTCTTGATGAAACTCATGTCAGCACGGTTGTGAAAGGCACTATCGGTTACCTTGATCCCGAGTACATGATGTCACAGCAGTTGACAGAGAAGTCTGATGTGTACTCATTTGGTGTAGTTCTTCTTGAGGTGTTATGTGGAAGACCTGCTATTGATATAACGCTTCCAAGAGAGAAAGTGAACTTAGCTGAATGGGTTGTGCTGTGCAAGAAACAAGGGTTGCTAGAAGAGGTCATTGACGTTTCATTGAAGGGTCATATTGATCCTAGCTCACTGAGACATTTTATTGAGACTGCAGAGAAGTGTTTGCAACACGATTCTTCTGATAGGCCCACTATGGCTGAGGTGCTGTGGGATATGGACTATACATTGAAGCTTCATCAAACTGCGAGGCTTGGAGAAGCCCATGAGGACAGCACTACCACTGCTTCATCAGCTTTTTTACTACCAAATATTCGGCATTTTGCTTCACTTGGTTCGACAGTTAACAGAGCTGATATGAGGGACGATGAGATGGAGTCCACAGAAAGCGAAATTTTCTCCCAACTGAGAATCGGCGAGGCCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

808

Amino Acids

90.52

Weight (kDa)

5.97

Isoelectric Point (pI)

36.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	40 - 131	1.4e-07	Malectin domain
Malectin_like	PF12819	42 - 392	3.4e-25	Malectin-like domain
Pkinase	PF00069	470 - 736	7.6e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	471 - 736	7.6e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10290 AT5G10290 AT5G65240 AT5G65240
fragaria_vesca	FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640
malus_domestica	MD01G1032200.v1.1 MD15G1322900.v1.1 MD15G1323000.v1.1
prunus_persica	Prupe.6G189000_v2.0.a1 Prupe.6G189000_v2.0.a1
pyrus_communis	pycom01g05940 pycom15g28350 pycom15g28360 pycom15g28370 pycom15g28410 pycom15g28430
rosa_chinensis	RchiOBHm_Chr2g0113091
rosa_laevigata	RLG00000018037
rosa_multiflora	Rmu_sc0005949.1_g000009 Rmu_sc0018337.1_g000002 Rmu_sc0034368.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130900
rosa_rugosa	Rorug02G0183900 Rorug02G0184000 Rorug02G0184100 Rorug02G0184200 Rorug02G0184300 Rorug02G0184400 Rorug02G0184500 Rorug02G0184600
rosa_samantha	Rh2AG239000 Rh2BG252700 Rh2CG243200 Rh2DG247100
rosa_wichuraiana	Rw2G018740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1203, 1446
AasI	GACNNNNNNGTC	1 cut(s)	1948
Acc36I	ACCTGC	1 cut(s)	2011
AccB1I	GGYRCC	2 cut(s)	230, 1466
AciI	CCGC	2 cut(s)	1564, 1570
AclWI	GGATC	6 cut(s)	142, 710, 780, 1397, 1907, 2114
AcsI	RAATTY	7 cut(s)	166, 381, 470, 580, 1529, 1710, 2391
AcuI	CTGAAG	1 cut(s)	50
AfaI	GTAC	8 cut(s)	319, 330, 445, 493, 853, 933, 1922, 1961
AfiI	CCNNNNNNNGG	1 cut(s)	820
AgeI	ACCGGT	1 cut(s)	314
AgsI	TTSAA	9 cut(s)	184, 418, 560, 579, 1360, 1535, 1709, 2107, 2230
AhlI	ACTAGT	1 cut(s)	1621
AjuI	GAANNNNNNNTTGG	2 cut(s)	462, 494
AleI	CACNNNNGTG	3 cut(s)	939, 1472, 1886
AloI	GAACNNNNNNTCC	2 cut(s)	389, 421
Alw21I	GWGCWC	1 cut(s)	657
Alw26I	GTCTC	6 cut(s)	212, 257, 1297, 1585, 2128, 2141
AlwI	GGATC	6 cut(s)	142, 710, 780, 1397, 1907, 2114
AlwNI	CAGNNNCTG	1 cut(s)	1730
Ama87I	CYCGRG	1 cut(s)	1916
AoxI	GGCC	9 cut(s)	357, 863, 1264, 1501, 1513, 1519, 1855, 2186, 2418
ApoI	RAATTY	7 cut(s)	166, 381, 470, 580, 1529, 1710, 2391
ArsI	GACNNNNNNTTYG	2 cut(s)	1695, 1727
AseI	ATTAAT	1 cut(s)	486
AsiGI	ACCGGT	1 cut(s)	314
Asp700I	GAANNNNTTC	2 cut(s)	422, 474
AspS9I	GGNCC	5 cut(s)	151, 1501, 1647, 1856, 2187
AsuC2I	CCSGG	1 cut(s)	815
AsuHPI	GGTGA	3 cut(s)	577, 651, 1087
AsuII	TTCGAA	2 cut(s)	300, 989
AvaI	CYCGRG	1 cut(s)	1916
AvaII	GGWCC	2 cut(s)	151, 1647
BaeI	ACNNNNGTAYC	2 cut(s)	1610, 1643
BanI	GGYRCC	2 cut(s)	230, 1466
BanII	GRGCYC	1 cut(s)	657
BbsI	GAAGAC	2 cut(s)	556, 2005
Bbv12I	GWGCWC	1 cut(s)	657
BbvCI	CCTCAGC	1 cut(s)	2199
BccI	CCATC	2 cut(s)	1581, 2365
BcnI	CCSGG	1 cut(s)	815
BcoDI	GTCTC	6 cut(s)	212, 257, 1297, 1585, 2128, 2141
BcuI	ACTAGT	1 cut(s)	1621
BfaI	CTAG	8 cut(s)	447, 495, 858, 915, 1083, 1622, 2081, 2124
BfmI	CTRYAG	2 cut(s)	969, 2151
BfuAI	ACCTGC	1 cut(s)	2011
BmcAI	AGTACT	3 cut(s)	445, 493, 853
Bme1390I	CCNGG	1 cut(s)	815
Bme18I	GGWCC	2 cut(s)	151, 1647
BmeT110I	CYCGRG	1 cut(s)	1916
BmgT120I	GGNCC	5 cut(s)	151, 1501, 1647, 1856, 2187
BmiI	GGNNCC	3 cut(s)	232, 1468, 1648
BmrFI	CCNGG	1 cut(s)	815
BmrI	ACTGGG	2 cut(s)	183, 697
BmsI	GCATC	4 cut(s)	130, 539, 803, 1776
BmuI	ACTGGG	2 cut(s)	183, 697
BoxI	GACNNNNGTC	1 cut(s)	1024
BpiI	GAAGAC	2 cut(s)	556, 2005
Bpu10I	CCTNAGC	2 cut(s)	837, 2199
Bpu14I	TTCGAA	2 cut(s)	300, 989
BpuEI	CTTGAG	4 cut(s)	346, 510, 1672, 2003
BpuMI	CCSGG	1 cut(s)	815
BsaBI	GATNNNNATC	1 cut(s)	705
BsaJI	CCNNGG	3 cut(s)	813, 1351, 1516
BsaWI	WCCGGW	2 cut(s)	314, 1380
Bsc4I	CCNNNNNNNGG	1 cut(s)	820
Bse118I	RCCGGY	1 cut(s)	314
Bse1I	ACTGG	4 cut(s)	178, 382, 692, 1735
Bse8I	GATNNNNATC	1 cut(s)	705
BseDI	CCNNGG	3 cut(s)	813, 1351, 1516
BseGI	GGATG	5 cut(s)	74, 703, 739, 1681, 1770
BseJI	GATNNNNATC	1 cut(s)	705
BseLI	CCNNNNNNNGG	1 cut(s)	820
BseMII	CTCAG	7 cut(s)	62, 582, 945, 1602, 2123, 2190, 2396
BseNI	ACTGG	4 cut(s)	178, 382, 692, 1735
BseRI	GAGGAG	1 cut(s)	1275
BsgI	GTGCAG	2 cut(s)	320, 1776
BshFI	GGCC	9 cut(s)	359, 865, 1266, 1503, 1515, 1521, 1857, 2188, 2420
BshNI	GGYRCC	2 cut(s)	230, 1466
BshTI	ACCGGT	1 cut(s)	314
BsiHKAI	GWGCWC	1 cut(s)	657
BsiHKCI	CYCGRG	1 cut(s)	1916
BsiSI	CCGG	3 cut(s)	315, 815, 1381
BslFI	GGGAC	4 cut(s)	722, 1012, 1660, 2375
BslI	CCNNNNNNNGG	1 cut(s)	820
BsmAI	GTCTC	6 cut(s)	212, 257, 1297, 1585, 2128, 2141
BsmFI	GGGAC	4 cut(s)	722, 1012, 1660, 2375
BsmI	GAATGC	1 cut(s)	1084
BsnI	GGCC	9 cut(s)	359, 865, 1266, 1503, 1515, 1521, 1857, 2188, 2420
BsoBI	CYCGRG	1 cut(s)	1916
Bsp119I	TTCGAA	2 cut(s)	300, 989
Bsp1286I	GDGCHC	1 cut(s)	657
Bsp1407I	TGTACA	1 cut(s)	931
Bsp143I	GATC	9 cut(s)	134, 435, 715, 772, 1011, 1402, 1657, 1912, 2119
BspACI	CCGC	2 cut(s)	1564, 1570
BspANI	GGCC	9 cut(s)	359, 865, 1266, 1503, 1515, 1521, 1857, 2188, 2420
BspCNI	CTCAG	7 cut(s)	61, 583, 946, 1603, 2124, 2191, 2397
BspLI	GGNNCC	3 cut(s)	232, 1468, 1648
BspMAI	CTGCAG	1 cut(s)	2155
BspMI	ACCTGC	1 cut(s)	2011
BspPI	GGATC	6 cut(s)	142, 710, 780, 1397, 1907, 2114
BspT104I	TTCGAA	2 cut(s)	300, 989
BspT107I	GGYRCC	2 cut(s)	230, 1466
BsrFI	RCCGGY	1 cut(s)	314
BsrGI	TGTACA	1 cut(s)	931
BsrI	ACTGG	4 cut(s)	178, 382, 692, 1735
BssAI	RCCGGY	1 cut(s)	314
BssECI	CCNNGG	3 cut(s)	813, 1351, 1516
BssMI	GATC	9 cut(s)	134, 435, 715, 772, 1011, 1402, 1657, 1912, 2119
BssT1I	CCWWGG	2 cut(s)	1351, 1516
Bst4CI	ACNGT	6 cut(s)	148, 605, 1598, 1778, 1885, 2341
Bst6I	CTCTTC	2 cut(s)	1206, 2079
BstAUI	TGTACA	1 cut(s)	931
BstBI	TTCGAA	2 cut(s)	300, 989
BstC8I	GCNNGC	3 cut(s)	335, 863, 867
BstDEI	CTNAG	9 cut(s)	48, 591, 837, 954, 1611, 2041, 2132, 2199, 2405
BstEII	GGTNACC	1 cut(s)	1904
BstF5I	GGATG	5 cut(s)	74, 703, 739, 1681, 1770
BstKTI	GATC	9 cut(s)	137, 438, 718, 775, 1014, 1405, 1660, 1915, 2122
BstMAI	GTCTC	6 cut(s)	212, 257, 1297, 1585, 2128, 2141
BstMBI	GATC	9 cut(s)	134, 435, 715, 772, 1011, 1402, 1657, 1912, 2119
BstMWI	GCNNNNNNNGC	3 cut(s)	1492, 1829, 2291
BstNSI	RCATGY	1 cut(s)	1442
BstPAI	GACNNNNGTC	1 cut(s)	1024
BstPI	GGTNACC	1 cut(s)	1904
BstSCI	CCNGG	1 cut(s)	813
BstSFI	CTRYAG	2 cut(s)	969, 2151
BstV2I	GAAGAC	2 cut(s)	556, 2005
BstXI	CCANNNNNNTGG	1 cut(s)	1352
BsuRI	GGCC	9 cut(s)	359, 865, 1266, 1503, 1515, 1521, 1857, 2188, 2420
BtsCI	GGATG	5 cut(s)	74, 703, 739, 1681, 1770
BtsI	GCAGTG	2 cut(s)	426, 2280
BtsIMutI	CAGTG	5 cut(s)	171, 306, 426, 2129, 2280
BveI	ACCTGC	1 cut(s)	2011
Cac8I	GCNNGC	3 cut(s)	335, 863, 867
CaiI	CAGNNNCTG	1 cut(s)	1730
Cfr10I	RCCGGY	1 cut(s)	314
Cfr13I	GGNCC	5 cut(s)	151, 1501, 1647, 1856, 2187
Csp6I	GTAC	8 cut(s)	318, 329, 444, 492, 852, 932, 1921, 1960
CspAI	ACCGGT	1 cut(s)	314
CviAII	CATG	8 cut(s)	888, 1123, 1291, 1439, 1636, 1874, 1924, 2264
CviQI	GTAC	8 cut(s)	318, 329, 444, 492, 852, 932, 1921, 1960
DdeI	CTNAG	9 cut(s)	48, 591, 837, 954, 1611, 2041, 2132, 2199, 2405
DpnI	GATC	9 cut(s)	136, 437, 717, 774, 1013, 1404, 1659, 1914, 2121
DpnII	GATC	9 cut(s)	134, 435, 715, 772, 1011, 1402, 1657, 1912, 2119
DraI	TTTAAA	1 cut(s)	508
DrdI	GACNNNNNNGTC	1 cut(s)	1948
DseDI	GACNNNNNNGTC	1 cut(s)	1948
Eam1104I	CTCTTC	2 cut(s)	1206, 2079
EarI	CTCTTC	2 cut(s)	1206, 2079
EciI	GGCGGA	1 cut(s)	1553
Ecl136II	GAGCTC	1 cut(s)	655
Eco130I	CCWWGG	2 cut(s)	1351, 1516
Eco147I	AGGCCT	2 cut(s)	1266, 1521
Eco24I	GRGCYC	1 cut(s)	657
Eco32I	GATATC	3 cut(s)	246, 703, 1365
Eco47I	GGWCC	2 cut(s)	151, 1647
Eco53kI	GAGCTC	1 cut(s)	655
Eco57I	CTGAAG	1 cut(s)	50
Eco88I	CYCGRG	1 cut(s)	1916
Eco91I	GGTNACC	1 cut(s)	1904
EcoICRI	GAGCTC	1 cut(s)	655
EcoO109I	RGGNCCY	1 cut(s)	1647
EcoO65I	GGTNACC	1 cut(s)	1904
EcoRI	GAATTC	1 cut(s)	470
EcoRV	GATATC	3 cut(s)	246, 703, 1365
EcoT14I	CCWWGG	2 cut(s)	1351, 1516
EcoT38I	GRGCYC	1 cut(s)	657
ErhI	CCWWGG	2 cut(s)	1351, 1516
FaeI	CATG	8 cut(s)	891, 1126, 1294, 1442, 1639, 1877, 1927, 2267
FalI	AAGNNNNNCTT	4 cut(s)	458, 490, 552, 584
FaqI	GGGAC	4 cut(s)	722, 1012, 1660, 2375
FatI	CATG	8 cut(s)	887, 1122, 1290, 1438, 1635, 1873, 1923, 2263
FokI	GGATG	5 cut(s)	61, 710, 746, 1688, 1757
FriOI	GRGCYC	1 cut(s)	657
FspBI	CTAG	8 cut(s)	447, 495, 858, 915, 1083, 1622, 2081, 2124
HaeIII	GGCC	9 cut(s)	359, 865, 1266, 1503, 1515, 1521, 1857, 2188, 2420
HapII	CCGG	3 cut(s)	315, 815, 1381
Hin1II	CATG	8 cut(s)	891, 1126, 1294, 1442, 1639, 1877, 1927, 2267
HincII	GTYRAC	3 cut(s)	281, 1941, 2344
HindII	GTYRAC	3 cut(s)	281, 1941, 2344
HindIII	AAGCTT	1 cut(s)	2231
HpaI	GTTAAC	1 cut(s)	2344
HpaII	CCGG	3 cut(s)	315, 815, 1381
HphI	GGTGA	3 cut(s)	577, 651, 1087
Hpy188III	TCNNGA	5 cut(s)	761, 1526, 1862, 1916, 1982
HpyCH4III	ACNGT	6 cut(s)	148, 605, 1598, 1778, 1885, 2341
HpyCH4IV	ACGT	1 cut(s)	2097
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1492, 1829, 2291
HpyF3I	CTNAG	9 cut(s)	48, 591, 837, 954, 1611, 2041, 2132, 2199, 2405
HpySE526I	ACGT	1 cut(s)	2097
Hsp92II	CATG	8 cut(s)	891, 1126, 1294, 1442, 1639, 1877, 1927, 2267
KspAI	GTTAAC	1 cut(s)	2344
Kzo9I	GATC	9 cut(s)	134, 435, 715, 772, 1011, 1402, 1657, 1912, 2119
LweI	GCATC	4 cut(s)	130, 539, 803, 1776
MaeI	CTAG	8 cut(s)	447, 495, 858, 915, 1083, 1622, 2081, 2124
MaeII	ACGT	1 cut(s)	2097
MaeIII	GTNAC	4 cut(s)	941, 1592, 1904, 1929
MalI	GATC	9 cut(s)	136, 437, 717, 774, 1013, 1404, 1659, 1914, 2121
MboI	GATC	9 cut(s)	134, 435, 715, 772, 1011, 1402, 1657, 1912, 2119
MfeI	CAATTG	1 cut(s)	127
MhlI	GDGCHC	1 cut(s)	657
MlyI	GAGTC	5 cut(s)	965, 1034, 1097, 1223, 2384
MmeI	TCCRAC	5 cut(s)	143, 622, 903, 997, 1143
MroXI	GAANNNNTTC	2 cut(s)	422, 474
MseI	TTAA	8 cut(s)	387, 486, 507, 756, 768, 1101, 1586, 2343
MslI	CAYNNNNRTG	6 cut(s)	939, 1472, 1665, 1752, 1779, 1886
MspI	CCGG	3 cut(s)	315, 815, 1381
MspR9I	CCNGG	1 cut(s)	815
MunI	CAATTG	1 cut(s)	127
Mva1269I	GAATGC	1 cut(s)	1084
MwoI	GCNNNNNNNGC	3 cut(s)	1492, 1829, 2291
NciI	CCSGG	1 cut(s)	815
NdeII	GATC	9 cut(s)	134, 435, 715, 772, 1011, 1402, 1657, 1912, 2119
NlaIII	CATG	8 cut(s)	891, 1126, 1294, 1442, 1639, 1877, 1927, 2267
NlaIV	GGNNCC	3 cut(s)	232, 1468, 1648
NmuCI	GTSAC	2 cut(s)	941, 1929
NspI	RCATGY	1 cut(s)	1442
NspV	TTCGAA	2 cut(s)	300, 989
OliI	CACNNNNGTG	3 cut(s)	939, 1472, 1886
PceI	AGGCCT	2 cut(s)	1266, 1521
PcsI	WCGNNNNNNNCGW	1 cut(s)	1027
PctI	GAATGC	1 cut(s)	1084
PdmI	GAANNNNTTC	2 cut(s)	422, 474
PfeI	GAWTC	7 cut(s)	191, 398, 595, 1287, 1670, 2174, 2409
PinAI	ACCGGT	1 cut(s)	314
PleI	GAGTC	5 cut(s)	964, 1033, 1096, 1222, 2383
PpsI	GAGTC	5 cut(s)	964, 1033, 1096, 1222, 2383
PpuMI	RGGWCCY	1 cut(s)	1647
PshAI	GACNNNNGTC	1 cut(s)	1024
PshBI	ATTAAT	1 cut(s)	486
PsiI	TTATAA	2 cut(s)	1203, 1446
Psp124BI	GAGCTC	1 cut(s)	657
Psp5II	RGGWCCY	1 cut(s)	1647
PspEI	GGTNACC	1 cut(s)	1904
PspN4I	GGNNCC	3 cut(s)	232, 1468, 1648
PspPI	GGNCC	5 cut(s)	151, 1501, 1647, 1856, 2187
PspPPI	RGGWCCY	1 cut(s)	1647
PstI	CTGCAG	1 cut(s)	2155
PstNI	CAGNNNCTG	1 cut(s)	1730
RsaI	GTAC	8 cut(s)	319, 330, 445, 493, 853, 933, 1922, 1961
RsaNI	GTAC	8 cut(s)	318, 329, 444, 492, 852, 932, 1921, 1960
RseI	CAYNNNNRTG	6 cut(s)	939, 1472, 1665, 1752, 1779, 1886
SacI	GAGCTC	1 cut(s)	657
SaqAI	TTAA	8 cut(s)	387, 486, 507, 756, 768, 1101, 1586, 2343
Sau3AI	GATC	9 cut(s)	134, 435, 715, 772, 1011, 1402, 1657, 1912, 2119
Sau96I	GGNCC	5 cut(s)	151, 1501, 1647, 1856, 2187
ScaI	AGTACT	3 cut(s)	445, 493, 853
SchI	GAGTC	5 cut(s)	965, 1034, 1097, 1223, 2384
ScrFI	CCNGG	1 cut(s)	815
SduI	GDGCHC	1 cut(s)	657
SfaNI	GCATC	4 cut(s)	130, 539, 803, 1776
SfcI	CTRYAG	2 cut(s)	969, 2151
SfuI	TTCGAA	2 cut(s)	300, 989
SinI	GGWCC	2 cut(s)	151, 1647
SmiMI	CAYNNNNRTG	6 cut(s)	939, 1472, 1665, 1752, 1779, 1886
SmlI	CTYRAG	4 cut(s)	361, 525, 1651, 1982
SmoI	CTYRAG	4 cut(s)	361, 525, 1651, 1982
SpeI	ACTAGT	1 cut(s)	1621
SseBI	AGGCCT	2 cut(s)	1266, 1521
SsiI	CCGC	2 cut(s)	1564, 1570
SspI	AATATT	2 cut(s)	1170, 2311
SspMI	CTAG	8 cut(s)	447, 495, 858, 915, 1083, 1622, 2081, 2124
SstI	GAGCTC	1 cut(s)	657
StuI	AGGCCT	2 cut(s)	1266, 1521
StyD4I	CCNGG	1 cut(s)	813
StyI	CCWWGG	2 cut(s)	1351, 1516
TaaI	ACNGT	6 cut(s)	148, 605, 1598, 1778, 1885, 2341
TaiI	ACGT	1 cut(s)	2100
TaqI	TCGA	5 cut(s)	300, 989, 1556, 1847, 2336
TatI	WGTACW	6 cut(s)	443, 491, 851, 931, 1920, 1959
TfiI	GAWTC	7 cut(s)	191, 398, 595, 1287, 1670, 2174, 2409
Tru1I	TTAA	8 cut(s)	387, 486, 507, 756, 768, 1101, 1586, 2343
Tru9I	TTAA	8 cut(s)	387, 486, 507, 756, 768, 1101, 1586, 2343
TscAI	CASTG	5 cut(s)	178, 313, 433, 2136, 2287
TseFI	GTSAC	2 cut(s)	941, 1929
Tsp45I	GTSAC	2 cut(s)	941, 1929
TspGWI	ACGGA	3 cut(s)	710, 917, 992
TspRI	CASTG	5 cut(s)	178, 313, 433, 2136, 2287
VpaK11BI	GGWCC	2 cut(s)	151, 1647
VspI	ATTAAT	1 cut(s)	486
XapI	RAATTY	7 cut(s)	166, 381, 470, 580, 1529, 1710, 2391
XceI	RCATGY	1 cut(s)	1442
XmnI	GAANNNNTTC	2 cut(s)	422, 474
XspI	CTAG	8 cut(s)	447, 495, 858, 915, 1083, 1622, 2081, 2124
ZrmI	AGTACT	3 cut(s)	445, 493, 853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.