Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002426

Physical Location & Seq

Genomic Coordinates Reverse (-)

17136550 .. 17139006

Gene Structure 2457 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0184100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGGAACATGTTCATATCCCATTGCTCTCTCTGCTTGTTTTTCTCCTCAACCTGTCATCCCTTCACTTTCTCTCTTTAGCCGATGATTATTACATCAACTGTGGCTCACATGATAATGCGAGCCTCAATACTACTGGCCAGAATTTCTCCGGGGAATCGAAGTCTGGTTACTCTTTCTCTGAAAGCAAGGCTGTTGTCAAAGACATCAACCAGTTGCTAGATATAGCACCTCTATATAAGACAGCAAGAGGTTTCAGTAAAGCATTCTACTACCAGTTCAACATCACTCAAAGTGGTACTTATCTGGTACGCCTACATTTCTTAGCTTTCTCCTCCTCCTCCTCCTCCTCCTCAAATAATCTCTCCACAGCTGTTTTCGGTGTCTTGGATTCTAAGAATTTCACGCTGTTGAACAATTTCACTGCCAAGAACAGTACCAACTACCCTGTGATAAAGGAATTCTTTGTCCGAATTGATATTACCGACTCATTTAGACTATATTTTATTCCTCAACCATCATCTTTTGCATTTGTAAATGCCATTGAATTATTCCTTGCCCCTTCAGATTTCATCCCTGAGAACAATATCAGTAATCTCCCTTTACACACAATTTACCGACTGAACGTTGGAGGCTCACCATGGAATGACCCACAAGGGAGAAACTGGGAAACAGATGATAGTCATCTTTCTGATCCAAACTCTGCAAAGAATGCCACTCCTAAAAGTGAACTTAATCTAAATTACTTGCCAGGACCAGTTGATGGTCTATTCCTATCCAACTATACTTTTGCCCCAATTCAGGTTTACGAGACTGCTAAACATATGAGTAACAGTAGTAGCAGGCCAGCCATATCCTCCAACGTAACATGGTTTTTTAGTGCGAGTAGGAAAGCTAGACACATTGTCCGGGCTCACTTCTGTGACATTATTGGTCAGCCTGGTGAGATTATATTTAACTTGTATTCAAATGGCAACCTCCGCAAGGAGATCAGCAACATTTCTCAATATCCGGCTGTTCCTTTCTACTATGACTTTCTGGTGAATTCTAGTGAGTCTGAACTCATTAACATCACCGTAAAACCTAAGAGTGAATCTGCAGATGCTTTTCTAAATGGTTTGGAAATATTGGAGATAGTGGAGGGATTAGCTCCAATTCCTACTGTGAGAGACTCCAAGAAGAATATTGTGGCTCCCGTGGTTGGTTCAGTTCTTGGAGGCCTGTCACTCATATGCGTTTTAATAGTTGGATTTGTGTTCGGTTTCAGACACAGAAAGGCGAAAAAACGTGTGGAAACTTCAGTTTGGTCACCAATGCCTGCAAATGGAGGAGGGAGTTCTCACAGCTCCGCTCTCAATCTTAATTACCTTGGGTTGAAGATATCTTTTAATGAAATTCAGTCTGCAACAAACAACTTTGACACAAATTTGGTGATAGGTAAGGGTGGCTTTGGGAATGTTTATAGAGGGACTCTCTTGAATGGTACAACAGTGGCTGTGAAGCGAGCTTATAAGCGAGATGAGCATGGATCAGGTTCAGGCCAAGGTCTCCCAGAATTCGAAACAGAAATCATAGTGTTGTCGAAAATCCGCCACCGCCATCTTGTCTCCTTAATTGGTTATTGTAATGAAAGGTCTGAGATGATACTAGTGTATGAGTTCATGGAAAAAGGGACGTTGAGAGATCATTTGTATGATTCGGATGTGCCTCGCTTGTCATGGAAGCAAAGACTTGAAATTTGTACTGGTGCAGCAAGGGGTCTTCATTATCTCCACACAGGTGCAGCTGGGGGAATCATTCACCGTGATGTCAAGTCCACCAACATATTGCTTGATGAAAACCATGTAGCCAAAGTTGCAGATTTTGGCCTTTCGAGATCTGGAGCTCTCGATGAAACGCATGTCAGCACCAATGTTAAAGGCACTTTTGGTTATCTTGATCCTGAGTACATGATGTCTGAACAGTTGACAGAAAAATCTGATGTTTACTCATTTGGTGTAGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCTATTGATCCAACGCTTCCAAGAGAGCAAATGAACTTGGCTGAATGGGGAATGCTTTGCCAGAAAAGAGGGCTGCTTGAAGAGATTGTTGATTCTCCACTAAAGGGTCAGATTGATCCTAACTCACTGCGTAAGTTTGGTGAGACGGTTGAGAAGTGTTTGCAAGAAGATGCTTGTGATAGGCCAACAATGGCGGATGTTCTGTGGGATTTGGAGTATGCATTACAGCTTCAGCAAACAACAAAGCTTAAAGAGGCTCATGAGGACAGCACAAACATTGATGCTTCATCAGCAGCATTCTCTTTGCCAAATGTTCAGCGTTTTCCTTCACTTGGTTCGACGAGGAATGGAGATGATATCAGGGAAGCCGACTTGGAGACGACAGAAAGTGAAATTTTCTCTCAATTGAAAATTGGTGATGCCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

818

Amino Acids

90.71

Weight (kDa)

5.8

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	32 - 377	7.4e-21	Malectin-like domain
Pkinase	PF00069	476 - 744	2.8e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	477 - 745	8.1e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0002426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10290 AT5G10290 AT5G65240 AT5G65240
fragaria_vesca	FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640 FvH4_1g20640
malus_domestica	MD01G1032200.v1.1 MD15G1322900.v1.1 MD15G1323000.v1.1
prunus_persica	Prupe.6G189000_v2.0.a1 Prupe.6G189000_v2.0.a1
pyrus_communis	pycom01g05940 pycom15g28350 pycom15g28360 pycom15g28370 pycom15g28410 pycom15g28430
rosa_chinensis	RchiOBHm_Chr2g0113091
rosa_laevigata	RLG00000018037
rosa_multiflora	Rmu_sc0005949.1_g000009 Rmu_sc0018337.1_g000002 Rmu_sc0034368.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130900
rosa_rugosa	Rorug02G0183900 Rorug02G0184000 Rorug02G0184100 Rorug02G0184200 Rorug02G0184300 Rorug02G0184400 Rorug02G0184500 Rorug02G0184600
rosa_samantha	Rh2AG239000 Rh2BG252700 Rh2CG243200 Rh2DG247100
rosa_wichuraiana	Rw2G018740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1509
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccBSI	CCGCTC	1 cut(s)	1349
AciI	CCGC	5 cut(s)	979, 1347, 1588, 1594, 2222
AclI	AACGTT	1 cut(s)	624
AclWI	GGATC	5 cut(s)	686, 1534, 1931, 2030, 2138
AcoI	YGGCCR	1 cut(s)	136
AcsI	RAATTY	9 cut(s)	142, 397, 458, 1042, 1392, 1423, 1553, 1734, 2421
AcuI	CTGAAG	3 cut(s)	546, 1281, 2243
AfaI	GTAC	6 cut(s)	298, 309, 436, 1483, 1741, 1946
AfiI	CCNNNNNNNGG	7 cut(s)	761, 799, 982, 1199, 1322, 2132, 2360
AflIII	ACRYGT	2 cut(s)	7, 1285
AhdI	GACNNNNNGTC	1 cut(s)	902
AhlI	ACTAGT	1 cut(s)	1645
AjnI	CCWGG	2 cut(s)	748, 937
AleI	CACNNNNGTG	2 cut(s)	918, 1776
Alw21I	GWGCWC	1 cut(s)	1885
Alw26I	GTCTC	6 cut(s)	803, 1161, 1550, 1609, 2165, 2399
AlwI	GGATC	5 cut(s)	686, 1534, 1931, 2030, 2138
AlwNI	CAGNNNCTG	1 cut(s)	1493
AoxI	GGCC	6 cut(s)	136, 842, 1216, 1537, 1864, 2210
ApeKI	GCWGC	4 cut(s)	1748, 1781, 2101, 2321
ApoI	RAATTY	9 cut(s)	142, 397, 458, 1042, 1392, 1423, 1553, 1734, 2421
ArsI	GACNNNNNNTTYG	2 cut(s)	1719, 1751
Asp700I	GAANNNNTTC	2 cut(s)	9, 416
AspS9I	GGNCC	1 cut(s)	752
AsuC2I	CCSGG	2 cut(s)	151, 908
AsuHPI	GGTGA	9 cut(s)	627, 953, 1051, 1063, 1299, 1441, 1790, 2180, 2456
AsuII	TTCGAA	1 cut(s)	1557
AvaII	GGWCC	1 cut(s)	752
BaeI	ACNNNNGTAYC	4 cut(s)	1473, 1506, 1634, 1667
BalI	TGGCCA	1 cut(s)	138
BanII	GRGCYC	2 cut(s)	913, 1885
BarI	GAAGNNNNNNTAC	2 cut(s)	152, 184
BbsI	GAAGAC	1 cut(s)	1751
Bbv12I	GWGCWC	1 cut(s)	1885
BbvI	GCAGC	4 cut(s)	1760, 1793, 2088, 2333
BccI	CCATC	3 cut(s)	523, 755, 1605
BciT130I	CCWGG	2 cut(s)	750, 939
BcnI	CCSGG	2 cut(s)	151, 908
BcoDI	GTCTC	6 cut(s)	803, 1161, 1550, 1609, 2165, 2399
BcuI	ACTAGT	1 cut(s)	1645
BfaI	CTAG	4 cut(s)	218, 894, 1047, 1646
BfmI	CTRYAG	1 cut(s)	1095
BglII	AGATCT	1 cut(s)	1874
BisI	GCNGC	4 cut(s)	1749, 1782, 2102, 2322
BlsI	GCNGC	4 cut(s)	1750, 1783, 2103, 2323
Bme1390I	CCNGG	4 cut(s)	151, 750, 908, 939
Bme18I	GGWCC	1 cut(s)	752
BmeRI	GACNNNNNGTC	1 cut(s)	902
BmgT120I	GGNCC	1 cut(s)	752
BmiI	GGNNCC	1 cut(s)	1191
BmrFI	CCNGG	4 cut(s)	151, 750, 908, 939
BmrI	ACTGGG	1 cut(s)	673
BmsI	GCATC	4 cut(s)	1090, 2188, 2299, 2437
BmuI	ACTGGG	1 cut(s)	673
BpiI	GAAGAC	1 cut(s)	1751
BplI	GAGNNNNNCTC	2 cut(s)	1455, 1487
BpmI	CTGGAG	1 cut(s)	1899
Bpu14I	TTCGAA	1 cut(s)	1557
BpuMI	CCSGG	2 cut(s)	151, 908
BsaBI	GATNNNNATC	1 cut(s)	681
BsaI	GGTCTC	1 cut(s)	1550
BsaJI	CCNNGG	5 cut(s)	150, 638, 1194, 1366, 1540
Bsc4I	CCNNNNNNNGG	7 cut(s)	761, 799, 982, 1199, 1322, 2132, 2360
Bse1I	ACTGG	6 cut(s)	139, 211, 274, 668, 755, 1747
Bse3DI	GCAATG	1 cut(s)	20
Bse8I	GATNNNNATC	1 cut(s)	681
BseBI	CCWGG	2 cut(s)	750, 939
BseDI	CCNNGG	5 cut(s)	150, 638, 1194, 1366, 1540
BseGI	GGATG	4 cut(s)	56, 570, 1705, 2230
BseJI	GATNNNNATC	1 cut(s)	681
BseLI	CCNNNNNNNGG	7 cut(s)	761, 799, 982, 1199, 1322, 2132, 2360
BseMI	GCAATG	1 cut(s)	20
BseMII	CTCAG	3 cut(s)	567, 1626, 1932
BseNI	ACTGG	6 cut(s)	139, 211, 274, 668, 755, 1747
BseRI	GAGGAG	9 cut(s)	35, 322, 325, 328, 331, 334, 337, 340, 1341
BseXI	GCAGC	4 cut(s)	1760, 1793, 2088, 2333
BseYI	CCCAGC	1 cut(s)	1784
BsgI	GTGCAG	2 cut(s)	1767, 1800
BshFI	GGCC	6 cut(s)	138, 844, 1218, 1539, 1866, 2212
BsiHKAI	GWGCWC	1 cut(s)	1885
BsiSI	CCGG	3 cut(s)	150, 907, 1010
BslFI	GGGAC	2 cut(s)	1480, 1684
BslI	CCNNNNNNNGG	7 cut(s)	761, 799, 982, 1199, 1322, 2132, 2360
BsmAI	GTCTC	6 cut(s)	803, 1161, 1550, 1609, 2165, 2399
BsmBI	CGTCTC	2 cut(s)	2165, 2399
BsmFI	GGGAC	2 cut(s)	1480, 1684
BsmI	GAATGC	4 cut(s)	263, 715, 2085, 2324
BsnI	GGCC	6 cut(s)	138, 844, 1218, 1539, 1866, 2212
Bso31I	GGTCTC	1 cut(s)	1550
Bsp119I	TTCGAA	1 cut(s)	1557
Bsp1286I	GDGCHC	2 cut(s)	913, 1885
Bsp143I	GATC	8 cut(s)	691, 987, 1526, 1681, 1874, 1936, 2035, 2143
Bsp19I	CCATGG	1 cut(s)	638
BspACI	CCGC	5 cut(s)	979, 1347, 1588, 1594, 2222
BspANI	GGCC	6 cut(s)	138, 844, 1218, 1539, 1866, 2212
BspCNI	CTCAG	3 cut(s)	568, 1627, 1933
BspHI	TCATGA	1 cut(s)	2287
BspLI	GGNNCC	1 cut(s)	1191
BspMAI	CTGCAG	1 cut(s)	1099
BspPI	GGATC	5 cut(s)	686, 1534, 1931, 2030, 2138
BspT104I	TTCGAA	1 cut(s)	1557
BspTNI	GGTCTC	1 cut(s)	1550
BsrBI	CCGCTC	1 cut(s)	1349
BsrDI	GCAATG	1 cut(s)	20
BsrI	ACTGG	6 cut(s)	139, 211, 274, 668, 755, 1747
BssECI	CCNNGG	5 cut(s)	150, 638, 1194, 1366, 1540
BssMI	GATC	8 cut(s)	691, 987, 1526, 1681, 1874, 1936, 2035, 2143
BssT1I	CCWWGG	3 cut(s)	638, 1366, 1540
Bst2UI	CCWGG	2 cut(s)	750, 939
Bst4CI	ACNGT	9 cut(s)	101, 434, 833, 1075, 1162, 1489, 1802, 1962, 2176
Bst6I	CTCTTC	1 cut(s)	2103
BstAPI	GCANNNNNTGC	1 cut(s)	710
BstBI	TTCGAA	1 cut(s)	1557
BstC8I	GCNNGC	5 cut(s)	121, 842, 846, 1317, 1503
BstDEI	CTNAG	6 cut(s)	322, 393, 576, 1083, 1635, 1941
BstDSI	CCRYGG	2 cut(s)	638, 1194
BstEII	GGTNACC	1 cut(s)	1305
BstENI	CCTNNNNNAGG	1 cut(s)	980
BstF5I	GGATG	4 cut(s)	56, 570, 1705, 2230
BstKTI	GATC	8 cut(s)	694, 990, 1529, 1684, 1877, 1939, 2038, 2146
BstMAI	GTCTC	6 cut(s)	803, 1161, 1550, 1609, 2165, 2399
BstMBI	GATC	8 cut(s)	691, 987, 1526, 1681, 1874, 1936, 2035, 2143
BstMWI	GCNNNNNNNGC	7 cut(s)	31, 710, 978, 1519, 1853, 2027, 2318
BstNI	CCWGG	2 cut(s)	750, 939
BstNSI	RCATGY	2 cut(s)	11, 1901
BstPI	GGTNACC	1 cut(s)	1305
BstSCI	CCNGG	4 cut(s)	149, 748, 906, 937
BstSFI	CTRYAG	1 cut(s)	1095
BstV1I	GCAGC	4 cut(s)	1760, 1793, 2088, 2333
BstV2I	GAAGAC	1 cut(s)	1751
BstX2I	RGATCY	1 cut(s)	1874
BstYI	RGATCY	1 cut(s)	1874
BsuRI	GGCC	6 cut(s)	138, 844, 1218, 1539, 1866, 2212
BtgI	CCRYGG	2 cut(s)	638, 1194
BtsCI	GGATG	4 cut(s)	56, 570, 1705, 2230
BtsI	GCAGTG	2 cut(s)	420, 2153
BtsIMutI	CAGTG	3 cut(s)	420, 1494, 2153
Cac8I	GCNNGC	5 cut(s)	121, 842, 846, 1317, 1503
CaiI	CAGNNNCTG	1 cut(s)	1493
CciI	TCATGA	1 cut(s)	2287
Cfr13I	GGNCC	1 cut(s)	752
Csp6I	GTAC	6 cut(s)	297, 308, 435, 1482, 1740, 1945
CviQI	GTAC	6 cut(s)	297, 308, 435, 1482, 1740, 1945
DdeI	CTNAG	6 cut(s)	322, 393, 576, 1083, 1635, 1941
DpnI	GATC	8 cut(s)	693, 989, 1528, 1683, 1876, 1938, 2037, 2145
DpnII	GATC	8 cut(s)	691, 987, 1526, 1681, 1874, 1936, 2035, 2143
DriI	GACNNNNNGTC	1 cut(s)	902
EaeI	YGGCCR	1 cut(s)	136
Eam1104I	CTCTTC	1 cut(s)	2103
Eam1105I	GACNNNNNGTC	1 cut(s)	902
EarI	CTCTTC	1 cut(s)	2103
EciI	GGCGGA	2 cut(s)	1577, 2237
Ecl136II	GAGCTC	1 cut(s)	1883
Eco130I	CCWWGG	3 cut(s)	638, 1366, 1540
Eco147I	AGGCCT	1 cut(s)	1218
Eco24I	GRGCYC	2 cut(s)	913, 1885
Eco31I	GGTCTC	1 cut(s)	1550
Eco32I	GATATC	2 cut(s)	1380, 2386
Eco47I	GGWCC	1 cut(s)	752
Eco53kI	GAGCTC	1 cut(s)	1883
Eco57I	CTGAAG	3 cut(s)	546, 1281, 2243
Eco91I	GGTNACC	1 cut(s)	1305
EcoICRI	GAGCTC	1 cut(s)	1883
EcoNI	CCTNNNNNAGG	1 cut(s)	980
EcoO65I	GGTNACC	1 cut(s)	1305
EcoRI	GAATTC	3 cut(s)	458, 1042, 1553
EcoRII	CCWGG	2 cut(s)	748, 937
EcoRV	GATATC	2 cut(s)	1380, 2386
EcoT14I	CCWWGG	3 cut(s)	638, 1366, 1540
EcoT22I	ATGCAT	1 cut(s)	2251
EcoT38I	GRGCYC	2 cut(s)	913, 1885
ErhI	CCWWGG	3 cut(s)	638, 1366, 1540
Esp3I	CGTCTC	2 cut(s)	2165, 2399
FalI	AAGNNNNNCTT	6 cut(s)	283, 315, 446, 478, 1430, 1462
FaqI	GGGAC	2 cut(s)	1480, 1684
FauNDI	CATATG	2 cut(s)	822, 1229
Fnu4HI	GCNGC	4 cut(s)	1749, 1782, 2102, 2322
FokI	GGATG	4 cut(s)	43, 557, 1712, 2237
FriOI	GRGCYC	2 cut(s)	913, 1885
Fsp4HI	GCNGC	4 cut(s)	1749, 1782, 2102, 2322
FspBI	CTAG	4 cut(s)	218, 894, 1047, 1646
GluI	GCNGC	4 cut(s)	1749, 1782, 2102, 2322
GsaI	CCCAGC	1 cut(s)	1788
GsuI	CTGGAG	1 cut(s)	1899
HaeIII	GGCC	6 cut(s)	138, 844, 1218, 1539, 1866, 2212
HapII	CCGG	3 cut(s)	150, 907, 1010
HincII	GTYRAC	1 cut(s)	1965
HindII	GTYRAC	1 cut(s)	1965
HindIII	AAGCTT	1 cut(s)	2273
HpaII	CCGG	3 cut(s)	150, 907, 1010
HphI	GGTGA	9 cut(s)	627, 953, 1051, 1063, 1299, 1441, 1790, 2180, 2456
Hpy166II	GTNNAC	5 cut(s)	728, 805, 1815, 1965, 1984
Hpy188III	TCNNGA	7 cut(s)	1474, 1872, 1878, 1886, 1934, 1940, 2288
Hpy8I	GTNNAC	5 cut(s)	728, 805, 1815, 1965, 1984
Hpy99I	CGWCG	1 cut(s)	2371
HpyAV	CCTTC	3 cut(s)	71, 570, 2364
HpyCH4III	ACNGT	9 cut(s)	101, 434, 833, 1075, 1162, 1489, 1802, 1962, 2176
HpyCH4IV	ACGT	4 cut(s)	624, 861, 1285, 1673
HpyF10VI	GCNNNNNNNGC	7 cut(s)	31, 710, 978, 1519, 1853, 2027, 2318
HpyF3I	CTNAG	6 cut(s)	322, 393, 576, 1083, 1635, 1941
HpySE526I	ACGT	4 cut(s)	624, 861, 1285, 1673
Kzo9I	GATC	8 cut(s)	691, 987, 1526, 1681, 1874, 1936, 2035, 2143
LmnI	GCTCC	4 cut(s)	1153, 1195, 1349, 1880
Lsp1109I	GCAGC	4 cut(s)	1760, 1793, 2088, 2333
LweI	GCATC	4 cut(s)	1090, 2188, 2299, 2437
MaeI	CTAG	4 cut(s)	218, 894, 1047, 1646
MaeII	ACGT	4 cut(s)	624, 861, 1285, 1673
MaeIII	GTNAC	6 cut(s)	167, 827, 862, 920, 1221, 1305
MalI	GATC	8 cut(s)	693, 989, 1528, 1683, 1876, 1938, 2037, 2145
MbiI	CCGCTC	1 cut(s)	1349
MboI	GATC	8 cut(s)	691, 987, 1526, 1681, 1874, 1936, 2035, 2143
MboII	GAAGA	5 cut(s)	1189, 1387, 1751, 2120, 2207
MfeI	CAATTG	1 cut(s)	2432
MflI	RGATCY	1 cut(s)	1874
MhlI	GDGCHC	2 cut(s)	913, 1885
MlsI	TGGCCA	1 cut(s)	138
MluNI	TGGCCA	1 cut(s)	138
MlyI	GAGTC	4 cut(s)	479, 1061, 1163, 1462
MmeI	TCCRAC	5 cut(s)	607, 801, 882, 1225, 2063
Mox20I	TGGCCA	1 cut(s)	138
Mph1103I	ATGCAT	1 cut(s)	2251
MroXI	GAANNNNTTC	2 cut(s)	9, 416
MscI	TGGCCA	1 cut(s)	138
MseI	TTAA	9 cut(s)	732, 954, 1065, 1238, 1359, 1386, 1610, 1914, 2277
MslI	CAYNNNNRTG	6 cut(s)	114, 918, 1228, 1689, 1776, 1803
Msp20I	TGGCCA	1 cut(s)	138
MspA1I	CMGCKG	2 cut(s)	371, 1784
MspI	CCGG	3 cut(s)	150, 907, 1010
MspR9I	CCNGG	4 cut(s)	151, 750, 908, 939
MunI	CAATTG	1 cut(s)	2432
Mva1269I	GAATGC	4 cut(s)	263, 715, 2085, 2324
MvaI	CCWGG	2 cut(s)	750, 939
MwoI	GCNNNNNNNGC	7 cut(s)	31, 710, 978, 1519, 1853, 2027, 2318
NciI	CCSGG	2 cut(s)	151, 908
NcoI	CCATGG	1 cut(s)	638
NdeI	CATATG	2 cut(s)	822, 1229
NdeII	GATC	8 cut(s)	691, 987, 1526, 1681, 1874, 1936, 2035, 2143
NlaIV	GGNNCC	1 cut(s)	1191
NmuCI	GTSAC	3 cut(s)	920, 1221, 1305
NsiI	ATGCAT	1 cut(s)	2251
NspI	RCATGY	2 cut(s)	11, 1901
NspV	TTCGAA	1 cut(s)	1557
OliI	CACNNNNGTG	2 cut(s)	918, 1776
PagI	TCATGA	1 cut(s)	2287
PceI	AGGCCT	1 cut(s)	1218
PciI	ACATGT	1 cut(s)	7
PctI	GAATGC	4 cut(s)	263, 715, 2085, 2324
PdmI	GAANNNNTTC	2 cut(s)	9, 416
PfeI	GAWTC	6 cut(s)	155, 389, 1091, 1694, 1791, 2120
PflMI	CCANNNNNTGG	1 cut(s)	761
PkrI	GCNGC	4 cut(s)	1750, 1783, 2103, 2323
PleI	GAGTC	4 cut(s)	479, 1060, 1163, 1462
PpsI	GAGTC	4 cut(s)	479, 1060, 1163, 1462
PscI	ACATGT	1 cut(s)	7
PsiI	TTATAA	1 cut(s)	1509
Psp124BI	GAGCTC	1 cut(s)	1885
Psp1406I	AACGTT	1 cut(s)	624
Psp6I	CCWGG	2 cut(s)	748, 937
PspEI	GGTNACC	1 cut(s)	1305
PspFI	CCCAGC	1 cut(s)	1784
PspGI	CCWGG	2 cut(s)	748, 937
PspN4I	GGNNCC	1 cut(s)	1191
PspPI	GGNCC	1 cut(s)	752
PstI	CTGCAG	1 cut(s)	1099
PstNI	CAGNNNCTG	1 cut(s)	1493
PsuI	RGATCY	1 cut(s)	1874
PvuII	CAGCTG	2 cut(s)	371, 1784
RsaI	GTAC	6 cut(s)	298, 309, 436, 1483, 1741, 1946
RsaNI	GTAC	6 cut(s)	297, 308, 435, 1482, 1740, 1945
RseI	CAYNNNNRTG	6 cut(s)	114, 918, 1228, 1689, 1776, 1803
SacI	GAGCTC	1 cut(s)	1885
SaqAI	TTAA	9 cut(s)	732, 954, 1065, 1238, 1359, 1386, 1610, 1914, 2277
SatI	GCNGC	4 cut(s)	1749, 1782, 2102, 2322
Sau3AI	GATC	8 cut(s)	691, 987, 1526, 1681, 1874, 1936, 2035, 2143
Sau96I	GGNCC	1 cut(s)	752
SchI	GAGTC	4 cut(s)	479, 1061, 1163, 1462
ScrFI	CCNGG	4 cut(s)	151, 750, 908, 939
SduI	GDGCHC	2 cut(s)	913, 1885
SfaNI	GCATC	4 cut(s)	1090, 2188, 2299, 2437
SfcI	CTRYAG	1 cut(s)	1095
SfuI	TTCGAA	1 cut(s)	1557
SinI	GGWCC	1 cut(s)	752
SmiMI	CAYNNNNRTG	6 cut(s)	114, 918, 1228, 1689, 1776, 1803
SpeI	ACTAGT	1 cut(s)	1645
SseBI	AGGCCT	1 cut(s)	1218
SsiI	CCGC	5 cut(s)	979, 1347, 1588, 1594, 2222
SspI	AATATT	2 cut(s)	1125, 1183
SspMI	CTAG	4 cut(s)	218, 894, 1047, 1646
SstI	GAGCTC	1 cut(s)	1885
StuI	AGGCCT	1 cut(s)	1218
StyD4I	CCNGG	4 cut(s)	149, 748, 906, 937
StyI	CCWWGG	3 cut(s)	638, 1366, 1540
TaaI	ACNGT	9 cut(s)	101, 434, 833, 1075, 1162, 1489, 1802, 1962, 2176
TaiI	ACGT	4 cut(s)	627, 864, 1288, 1676
TaqI	TCGA	6 cut(s)	158, 1557, 1580, 1871, 1887, 2366
TatI	WGTACW	2 cut(s)	1739, 1944
TfiI	GAWTC	6 cut(s)	155, 389, 1091, 1694, 1791, 2120
Tru1I	TTAA	9 cut(s)	732, 954, 1065, 1238, 1359, 1386, 1610, 1914, 2277
Tru9I	TTAA	9 cut(s)	732, 954, 1065, 1238, 1359, 1386, 1610, 1914, 2277
TscAI	CASTG	3 cut(s)	427, 1494, 2160
TseFI	GTSAC	3 cut(s)	920, 1221, 1305
TseI	GCWGC	4 cut(s)	1748, 1781, 2101, 2321
Tsp45I	GTSAC	3 cut(s)	920, 1221, 1305
TspDTI	ATGAA	9 cut(s)	559, 1404, 1641, 1648, 1751, 1848, 1905, 2075, 2304
TspRI	CASTG	3 cut(s)	427, 1494, 2160
Van91I	CCANNNNNTGG	1 cut(s)	761
VpaK11BI	GGWCC	1 cut(s)	752
XagI	CCTNNNNNAGG	1 cut(s)	980
XapI	RAATTY	9 cut(s)	142, 397, 458, 1042, 1392, 1423, 1553, 1734, 2421
XceI	RCATGY	2 cut(s)	11, 1901
XmnI	GAANNNNTTC	2 cut(s)	9, 416
XspI	CTAG	4 cut(s)	218, 894, 1047, 1646
Zsp2I	ATGCAT	1 cut(s)	2251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.