MADS-box transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77950 AT1G77950 AT1G77950 AT1G77950 AT1G77980 |
| fragaria_vesca | FvH4_5g38110 FvH4_5g38110 |
| malus_domestica | MD08G1177000.v1.1 MD08G1177100.v1.1 MD15G1362500.v1.1 |
| prunus_persica | Prupe.1G511300_v2.0.a1 |
| pyrus_communis | pycom08g15190 pycom15g32540 |
| rosa_chinensis | RchiOBHm_Chr7g0240061 RchiOBHm_Chr7g0240131 |
| rosa_laevigata | RLG00000000708 |
| rosa_multiflora | Rmu_sc0009928.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00220460 |
| rosa_rugosa | Rorug04G0113100 Rorug07G0332600 Rorug07G0332700 Rorug07G0332700 Rorug07G0332800 Rorug07G0332900 |
| rosa_samantha | Rh7AG486000 Rh7BG459300 Rh7CG503400 Rh7DG471800 |
| rosa_wichuraiana | Rw7G040760 Rw7G040830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 156 |
| AclWI | GGATC | 1 cut(s) | 194 |
| AcyI | GRCGYC | 1 cut(s) | 157 |
| AluBI | AGCT | 3 cut(s) | 16, 95, 103 |
| AluI | AGCT | 3 cut(s) | 16, 95, 103 |
| AlwI | GGATC | 1 cut(s) | 194 |
| AseI | ATTAAT | 1 cut(s) | 213 |
| AspLEI | GCGC | 1 cut(s) | 159 |
| AsuC2I | CCSGG | 1 cut(s) | 154 |
| BanI | GGYRCC | 1 cut(s) | 156 |
| BccI | CCATC | 1 cut(s) | 116 |
| BcnI | CCSGG | 1 cut(s) | 154 |
| BfoI | RGCGCY | 1 cut(s) | 160 |
| Bme1390I | CCNGG | 1 cut(s) | 154 |
| BmiI | GGNNCC | 1 cut(s) | 158 |
| BmrFI | CCNGG | 1 cut(s) | 154 |
| BpmI | CTGGAG | 1 cut(s) | 38 |
| Bpu10I | CCTNAGC | 1 cut(s) | 161 |
| BpuMI | CCSGG | 1 cut(s) | 154 |
| BsaHI | GRCGYC | 1 cut(s) | 157 |
| Bse3DI | GCAATG | 1 cut(s) | 126 |
| BseGI | GGATG | 2 cut(s) | 108, 199 |
| BseMI | GCAATG | 1 cut(s) | 126 |
| BshNI | GGYRCC | 1 cut(s) | 156 |
| BsiSI | CCGG | 1 cut(s) | 153 |
| Bsp143I | GATC | 1 cut(s) | 186 |
| BspLI | GGNNCC | 1 cut(s) | 158 |
| BspPI | GGATC | 1 cut(s) | 194 |
| BspT107I | GGYRCC | 1 cut(s) | 156 |
| BsrDI | GCAATG | 1 cut(s) | 126 |
| BssMI | GATC | 1 cut(s) | 186 |
| BssNI | GRCGYC | 1 cut(s) | 157 |
| BstACI | GRCGYC | 1 cut(s) | 157 |
| BstDEI | CTNAG | 1 cut(s) | 161 |
| BstF5I | GGATG | 2 cut(s) | 108, 199 |
| BstH2I | RGCGCY | 1 cut(s) | 160 |
| BstHHI | GCGC | 1 cut(s) | 159 |
| BstKTI | GATC | 1 cut(s) | 189 |
| BstMBI | GATC | 1 cut(s) | 186 |
| BstSCI | CCNGG | 1 cut(s) | 152 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 173 |
| BtsCI | GGATG | 2 cut(s) | 108, 199 |
| CfoI | GCGC | 1 cut(s) | 159 |
| CviJI | RGCY | 4 cut(s) | 16, 95, 103, 165 |
| CviKI_1 | RGCY | 4 cut(s) | 16, 95, 103, 165 |
| DdeI | CTNAG | 1 cut(s) | 161 |
| DinI | GGCGCC | 1 cut(s) | 158 |
| DpnI | GATC | 1 cut(s) | 188 |
| DpnII | GATC | 1 cut(s) | 186 |
| EgeI | GGCGCC | 1 cut(s) | 158 |
| EheI | GGCGCC | 1 cut(s) | 158 |
| FaiI | YATR | 3 cut(s) | 99, 140, 243 |
| FokI | GGATG | 2 cut(s) | 95, 206 |
| GlaI | GCGC | 1 cut(s) | 158 |
| GsuI | CTGGAG | 1 cut(s) | 38 |
| HaeII | RGCGCY | 1 cut(s) | 160 |
| HapII | CCGG | 1 cut(s) | 153 |
| HhaI | GCGC | 1 cut(s) | 159 |
| Hin1I | GRCGYC | 1 cut(s) | 157 |
| Hin6I | GCGC | 1 cut(s) | 157 |
| HinP1I | GCGC | 1 cut(s) | 157 |
| HindIII | AAGCTT | 1 cut(s) | 93 |
| HinfI | GANTC | 1 cut(s) | 81 |
| HpaII | CCGG | 1 cut(s) | 153 |
| Hpy166II | GTNNAC | 1 cut(s) | 201 |
| Hpy8I | GTNNAC | 1 cut(s) | 201 |
| HpyAV | CCTTC | 1 cut(s) | 177 |
| HpyF3I | CTNAG | 1 cut(s) | 161 |
| Hsp92I | GRCGYC | 1 cut(s) | 157 |
| HspAI | GCGC | 1 cut(s) | 157 |
| KasI | GGCGCC | 1 cut(s) | 156 |
| Kzo9I | GATC | 1 cut(s) | 186 |
| LpnPI | CCDG | 3 cut(s) | 2, 159, 166 |
| MaeIII | GTNAC | 1 cut(s) | 55 |
| MalI | GATC | 1 cut(s) | 188 |
| MboI | GATC | 1 cut(s) | 186 |
| Mly113I | GGCGCC | 1 cut(s) | 157 |
| MlyI | GAGTC | 1 cut(s) | 75 |
| MnlI | CCTC | 2 cut(s) | 160, 184 |
| MseI | TTAA | 4 cut(s) | 12, 87, 213, 253 |
| MspI | CCGG | 1 cut(s) | 153 |
| MspR9I | CCNGG | 1 cut(s) | 154 |
| NarI | GGCGCC | 1 cut(s) | 157 |
| NciI | CCSGG | 1 cut(s) | 154 |
| NdeII | GATC | 1 cut(s) | 186 |
| NlaIV | GGNNCC | 1 cut(s) | 158 |
| PleI | GAGTC | 1 cut(s) | 75 |
| PluTI | GGCGCC | 1 cut(s) | 160 |
| PpsI | GAGTC | 1 cut(s) | 75 |
| PshBI | ATTAAT | 1 cut(s) | 213 |
| PspN4I | GGNNCC | 1 cut(s) | 158 |
| SaqAI | TTAA | 4 cut(s) | 12, 87, 213, 253 |
| Sau3AI | GATC | 1 cut(s) | 186 |
| SchI | GAGTC | 1 cut(s) | 75 |
| ScrFI | CCNGG | 1 cut(s) | 154 |
| SetI | ASST | 3 cut(s) | 18, 97, 105 |
| SfoI | GGCGCC | 1 cut(s) | 158 |
| SspDI | GGCGCC | 1 cut(s) | 156 |
| StyD4I | CCNGG | 1 cut(s) | 152 |
| TaqI | TCGA | 2 cut(s) | 49, 189 |
| Tru1I | TTAA | 4 cut(s) | 12, 87, 213, 253 |
| Tru9I | TTAA | 4 cut(s) | 12, 87, 213, 253 |
| VspI | ATTAAT | 1 cut(s) | 213 |