Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0004939

Physical Location & Seq

Genomic Coordinates Reverse (-)

36466710 .. 36469852

Gene Structure 3143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0332800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGCTCATCGTCCCAATGACCATCCTCGGCGCGAGACAGTGATCGATATAGGGCGCCAGAAGCCCGCAAACTTCACTGGCGGGCTCGAGTTTTCAAGCCTCACATACACGGTGACAAAGAAGACCAAGCTTGACGGGAAATGGCTGAAGCAAGATGTGGACTTGCTCCACAAGATCACAGGTTTTGCACCCAAGGGTTGCATCACGGCTGTGATGGGTCCCAGTGGGGCCGGAAAGTCAACGTTCTTGGATGGAGTTGCCGGTAGAATAGCGAGTGGAAGTCTTAAAGGGAGAGTGTCCTTGGACGGGAAGGAAATGAGTCCTAGCATAATTAAGAGGACTTCAGCTTATATTATGCAGGATGATAGGCTTTTCCCAACCCTTACAGTCTATGAGACTTTGATGTTCGCTGCTGATTTTAGGTTGGGGCCGGTCACAACTACTGAGAAGAAACAGCGTGTTGAAAAGTTGATTCAACAGCTCGGCTTATCGTCAGCTCGGAACACTTACATAGGTGATGAGGGCAGTCGAGGAGTGTCCGGAGGAGAGCGTCGCCGAGTCTCTATTGGTGTTGACATCATTCACGGACCTGCCCTCCTCTTCCTCGACGAGCCAACATCAGGCCTAGACTCCACTAGTGCTCACAGTGTTATCGAAAAGGTCCACCACATTGCACGCTCTGGAAGCACTGTGATCCTCACCATTCACCAGCCCTCGTCAAGAATCCAATTGCTTCTCGACCATATGCTTATCCTAGCTCGTGGCCAGCTCATGTATCAAGGGTCACCGAAAGACGTGTCTCTTCATCTCGGTCGAATGGGACGGAAAGTCCACAAAGAAGAGAGTCCAATTGAGTACCTCATTGATGTTATTCAGGAATATGATCAATCCGAACATGGAGTCGAGGCACTCGCTGAGTTTGCACGTACAGGTGTGAAACCCCCTAGGTTGATTGAGGGAGACGTGTCGATTTCAACCATTCTCCCCACCCCAACTCCTCCACGACGCGGTGGCCGTGGGAATGATTTAGGCCTCGAGAAGAATGGAAAGCGGCTTCCTTTGCAGACTAGTACACATGTGATCAATGATTTTGATCATAGTTTGAGGAGCCCTTATAGCACCAAGAACCCTTATAACACTTCGAGGTCATGGACTGCTGGGAATAGTGGAGTCATGGACACACTTCACAGGTTTACTCCTTTAAGGAAACCTAAAGATCTCAAGATGCAAAGCCCCATGAGTGCATCCCCTGGTTACAATTATTCAAGTGAGATCATTCAGAACACACCAACACCACACAGCAGTGACTACACAGTAAATGAAAACGACTATCTGACCCCTGATTATGATCCAAATGCCTCTTCCCACCACAACCTGGTACCCAAATTTGCCAACTCCTTCTTCCCTGAGACATGGATCCTTATGCGCCGCAACTTCATAAACATTCGCAGAACACCCGAGCTCTTCCTCTCAAGGCTCGTAGTCCTTACATTCATGGGCTTCTTAATGGCCACCATGTTCAAGAACCCGCCCGAGAACGCTCAAGGCATCACCAACCGCCTCAGTTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCATCCAACGATGCTGTCCCCGCCTTCATCCAAGAGCGCTTCATCTTTGTTCGTGAGACCGCTCACAATGCCTACCGAGCCTCCTCTTACACCATAGCTGGCCTAATCACTTACCTACCTTTTCTTGCGCTCCAAGCTGCAGTTTACGCAGGTATTGTCTGGTTTGCCCTAAAGCTCCGCGGACCCTTCCTCTACTTCTTGGTCGTCCTCTATGTCTCTCTGCTCTCTACAAACTCGTTTGTGGTGTTTGTGAGCTCAGTTGTGCCCAACTACATCTTGGGTTACGCCGCGGTCATTGCTTTCACTGCTCTCTTCTTCTTGTTCTGTGGATACTTCTTGAACAGTAATGACATTCCTAAATATTGGAAGTGGATGAACTACGTCTCCACCATGACATACCCATATGAAGGTTTGATAATGAATCAATATCAGACCCATCTTCCTTTCGGACAAAATCCAAATGGTACCAACATTACTGGTTTTCAAATTTTGGACAGTCTTCATATAAACTATGGAGGAGGCGAGACCCTGTCTTCGGCCAAGAAGTGGGAGAAGATTTACATAATGTTGGGTTGGACTGTCCTGTATAGGATCTTGTTTTATCTGGTCATTCGATTCTTCTCCAAGAACCAGAGGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0010016 GO:0010152 GO:0010229 GO:0010468 GO:0010556 GO:0010622 GO:0010769 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022603 GO:0022604 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0040008 GO:0043900 GO:0045595 GO:0048229 GO:0048281 GO:0048283 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048445 GO:0048467 GO:0048481 GO:0048482 GO:0048608 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051252 GO:0051510 GO:0060255 GO:0060284 GO:0061458 GO:0065007 GO:0080090 GO:0080092 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04013 ko04022 ko04371 ko05418 map04013 map04022 map04371 map05418

Pfam Domains

Protein Families

SRF-TF

Protein Analysis

746

Amino Acids

83.82

Weight (kDa)

9.45

Isoelectric Point (pI)

41.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	61 - 207	1.3e-25	ABC transporter
ABC2_membrane	PF01061	470 - 676	1.3e-41	ABC-2 type transporter
ABC2_membrane_3	PF12698	514 - 733	2.1e-07	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004939)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77950 AT1G77950 AT1G77950 AT1G77950 AT1G77980
fragaria_vesca	FvH4_5g38110 FvH4_5g38110
malus_domestica	MD08G1177000.v1.1 MD08G1177100.v1.1 MD15G1362500.v1.1
prunus_persica	Prupe.1G511300_v2.0.a1
pyrus_communis	pycom08g15190 pycom15g32540
rosa_chinensis	RchiOBHm_Chr7g0240061 RchiOBHm_Chr7g0240131
rosa_laevigata	RLG00000000708
rosa_multiflora	Rmu_sc0009928.1_g000004
rosa_roxburghii	Rroxscaffold_3G00220460
rosa_rugosa	Rorug04G0113100 Rorug07G0332600 Rorug07G0332700 Rorug07G0332700 Rorug07G0332800 Rorug07G0332900
rosa_samantha	Rh7AG486000 Rh7BG459300 Rh7CG503400 Rh7DG471800
rosa_wichuraiana	Rw7G040760 Rw7G040830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1134
Acc36I	ACCTGC	2 cut(s)	598, 1739
Acc65I	GGTACC	2 cut(s)	1378, 2063
AccB1I	GGYRCC	3 cut(s)	54, 1378, 2063
AccB7I	CCANNNNNTGG	2 cut(s)	1375, 2145
AccBSI	CCGCTC	1 cut(s)	1661
AccII	CGCG	4 cut(s)	33, 1008, 1779, 1889
AccIII	TCCGGA	1 cut(s)	539
AclI	AACGTT	1 cut(s)	242
AclWI	GGATC	5 cut(s)	688, 1343, 1411, 1424, 2198
AcoI	YGGCCR	4 cut(s)	763, 1012, 1509, 2136
AcsI	RAATTY	2 cut(s)	1385, 2085
AcuI	CTGAAG	2 cut(s)	167, 327
AcyI	GRCGYC	1 cut(s)	55
AfaI	GTAC	5 cut(s)	857, 928, 1072, 1380, 2065
AfeI	AGCGCT	1 cut(s)	1637
AfiI	CCNNNNNNNGG	7 cut(s)	306, 620, 1007, 1375, 2006, 2134, 2145
AflIII	ACRYGT	3 cut(s)	795, 963, 1075
AgsI	TTSAA	8 cut(s)	96, 464, 476, 975, 1266, 1522, 1939, 2084
AhdI	GACNNNNNGTC	1 cut(s)	827
AhlI	ACTAGT	2 cut(s)	635, 1067
AjiI	CACGTC	2 cut(s)	796, 964
AjnI	CCWGG	2 cut(s)	1249, 1374
AjuI	GAANNNNNNNTTGG	4 cut(s)	1345, 1377, 1385, 1417
AleI	CACNNNNGTG	2 cut(s)	209, 1302
AloI	GAACNNNNNNTCC	2 cut(s)	1967, 1999
Alw21I	GWGCWC	3 cut(s)	643, 1464, 1856
AlwI	GGATC	5 cut(s)	688, 1343, 1411, 1424, 2198
Ama87I	CYCGRG	4 cut(s)	86, 1034, 1457, 1532
Aor13HI	TCCGGA	1 cut(s)	539
Aor51HI	AGCGCT	1 cut(s)	1637
AoxI	GGCC	9 cut(s)	228, 428, 622, 763, 1012, 1030, 1509, 1699, 2136
ApeKI	GCWGC	2 cut(s)	410, 1736
ApoI	RAATTY	2 cut(s)	1385, 2085
ArsI	GACNNNNNNTTYG	6 cut(s)	782, 814, 885, 917, 2116, 2148
Asp718I	GGTACC	2 cut(s)	1378, 2063
AspA2I	CCTAGG	1 cut(s)	944
AspLEI	GCGC	5 cut(s)	33, 57, 1428, 1638, 1729
AspS9I	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1781
AsuHPI	GGTGA	7 cut(s)	124, 527, 691, 698, 777, 1543, 1570
AvaI	CYCGRG	4 cut(s)	86, 1034, 1457, 1532
AvaII	GGWCC	4 cut(s)	218, 587, 661, 1781
AvrII	CCTAGG	1 cut(s)	944
BaeGI	GKGCMC	1 cut(s)	1866
BalI	TGGCCA	2 cut(s)	765, 1511
BamHI	GGATCC	1 cut(s)	1416
BanI	GGYRCC	3 cut(s)	54, 1378, 2063
BanII	GRGCYC	4 cut(s)	87, 1112, 1464, 1856
BauI	CACGAG	1 cut(s)	759
BbsI	GAAGAC	3 cut(s)	128, 2090, 2124
Bbv12I	GWGCWC	3 cut(s)	643, 1464, 1856
BbvI	GCAGC	2 cut(s)	397, 1723
BccI	CCATC	4 cut(s)	30, 208, 245, 2043
BceAI	ACGGC	2 cut(s)	222, 999
BciT130I	CCWGG	2 cut(s)	1251, 1376
BciVI	GTATCC	1 cut(s)	1922
BclI	TGATCA	3 cut(s)	883, 1080, 1093
BcuI	ACTAGT	2 cut(s)	635, 1067
BfaI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068
BfmI	CTRYAG	1 cut(s)	1737
BfoI	RGCGCY	2 cut(s)	58, 1639
BfuAI	ACCTGC	2 cut(s)	598, 1739
BfuI	GTATCC	1 cut(s)	1922
BglII	AGATCT	1 cut(s)	1216
BisI	GCNGC	5 cut(s)	411, 1052, 1429, 1737, 1887
BlnI	CCTAGG	1 cut(s)	944
BlsI	GCNGC	5 cut(s)	412, 1053, 1430, 1738, 1888
Bme1390I	CCNGG	2 cut(s)	1251, 1376
Bme18I	GGWCC	4 cut(s)	218, 587, 661, 1781
BmeRI	GACNNNNNGTC	1 cut(s)	827
BmeT110I	CYCGRG	4 cut(s)	86, 1034, 1457, 1532
BmgBI	CACGTC	2 cut(s)	796, 964
BmgT120I	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1781
BmrFI	CCNGG	2 cut(s)	1251, 1376
BmrI	ACTGGG	1 cut(s)	216
BmsI	GCATC	5 cut(s)	210, 1215, 1253, 1557, 1600
BmuI	ACTGGG	1 cut(s)	216
BpiI	GAAGAC	3 cut(s)	128, 2090, 2124
BpuEI	CTTGAG	3 cut(s)	1205, 1456, 1527
Bsa29I	ATCGAT	1 cut(s)	45
BsaAI	YACGTR	1 cut(s)	926
BsaBI	GATNNNNATC	2 cut(s)	1092, 1347
BsaHI	GRCGYC	1 cut(s)	55
BsaI	GGTCTC	2 cut(s)	1649, 2117
BsaJI	CCNNGG	8 cut(s)	26, 192, 300, 944, 1015, 1249, 1777, 1887
BsaWI	WCCGGW	1 cut(s)	539
BsaXI	ACNNNNNCTCC	8 cut(s)	579, 609, 979, 1009, 1664, 1694, 1967, 1997
Bsc4I	CCNNNNNNNGG	7 cut(s)	306, 620, 1007, 1375, 2006, 2134, 2145
Bse118I	RCCGGY	2 cut(s)	260, 430
Bse1I	ACTGG	3 cut(s)	82, 222, 2080
Bse3DI	GCAATG	2 cut(s)	669, 1893
Bse8I	GATNNNNATC	2 cut(s)	1092, 1347
BseAI	TCCGGA	1 cut(s)	539
BseBI	CCWGG	2 cut(s)	1251, 1376
BseCI	ATCGAT	1 cut(s)	45
BseDI	CCNNGG	8 cut(s)	26, 192, 300, 944, 1015, 1249, 1777, 1887
BseGI	GGATG	7 cut(s)	22, 256, 367, 1244, 1601, 1626, 1977
BseJI	GATNNNNATC	2 cut(s)	1092, 1347
BseLI	CCNNNNNNNGG	7 cut(s)	306, 620, 1007, 1375, 2006, 2134, 2145
BseMI	GCAATG	2 cut(s)	669, 1893
BseMII	CTCAG	5 cut(s)	435, 906, 1398, 1576, 1869
BseNI	ACTGG	3 cut(s)	82, 222, 2080
BseRI	GAGGAG	7 cut(s)	546, 558, 587, 987, 1120, 1672, 2130
BseSI	GKGCMC	1 cut(s)	1866
BseXI	GCAGC	2 cut(s)	397, 1723
BseYI	CCCAGC	1 cut(s)	1157
Bsh1236I	CGCG	4 cut(s)	33, 1008, 1779, 1889
Bsh1285I	CGRYCG	1 cut(s)	814
BshFI	GGCC	9 cut(s)	230, 430, 624, 765, 1014, 1032, 1511, 1701, 2138
BshNI	GGYRCC	3 cut(s)	54, 1378, 2063
BshVI	ATCGAT	1 cut(s)	45
BsiEI	CGRYCG	1 cut(s)	814
BsiHKAI	GWGCWC	3 cut(s)	643, 1464, 1856
BsiHKCI	CYCGRG	4 cut(s)	86, 1034, 1457, 1532
BsiSI	CCGG	4 cut(s)	231, 261, 431, 540
BslFI	GGGAC	3 cut(s)	204, 834, 1601
BslI	CCNNNNNNNGG	7 cut(s)	306, 620, 1007, 1375, 2006, 2134, 2145
BsmBI	CGTCTC	2 cut(s)	954, 1987
BsmFI	GGGAC	3 cut(s)	204, 834, 1601
BsnI	GGCC	9 cut(s)	230, 430, 624, 765, 1014, 1032, 1511, 1701, 2138
Bso31I	GGTCTC	2 cut(s)	1649, 2117
BsoBI	CYCGRG	4 cut(s)	86, 1034, 1457, 1532
Bsp1286I	GDGCHC	6 cut(s)	87, 643, 1112, 1464, 1856, 1866
Bsp13I	TCCGGA	1 cut(s)	539
BspANI	GGCC	9 cut(s)	230, 430, 624, 765, 1014, 1032, 1511, 1701, 2138
BspCNI	CTCAG	5 cut(s)	436, 907, 1399, 1575, 1868
BspDI	ATCGAT	1 cut(s)	45
BspEI	TCCGGA	1 cut(s)	539
BspFNI	CGCG	4 cut(s)	33, 1008, 1779, 1889
BspMAI	CTGCAG	1 cut(s)	1741
BspMI	ACCTGC	2 cut(s)	598, 1739
BspPI	GGATC	5 cut(s)	688, 1343, 1411, 1424, 2198
BspQI	GCTCTTC	1 cut(s)	1469
BspT107I	GGYRCC	3 cut(s)	54, 1378, 2063
BspTNI	GGTCTC	2 cut(s)	1649, 2117
BsrBI	CCGCTC	1 cut(s)	1661
BsrDI	GCAATG	2 cut(s)	669, 1893
BsrFI	RCCGGY	2 cut(s)	260, 430
BsrI	ACTGG	3 cut(s)	82, 222, 2080
BssAI	RCCGGY	2 cut(s)	260, 430
BssECI	CCNNGG	8 cut(s)	26, 192, 300, 944, 1015, 1249, 1777, 1887
BssNI	GRCGYC	1 cut(s)	55
BssSI	CACGAG	1 cut(s)	759
BssT1I	CCWWGG	3 cut(s)	192, 300, 944
Bst2BI	CACGAG	1 cut(s)	759
Bst2UI	CCWGG	2 cut(s)	1251, 1376
Bst6I	CTCTTC	7 cut(s)	605, 807, 834, 1366, 1469, 1595, 1916
BstACI	GRCGYC	1 cut(s)	55
BstBAI	YACGTR	1 cut(s)	926
BstC8I	GCNNGC	5 cut(s)	66, 83, 676, 767, 1699
BstDEI	CTNAG	5 cut(s)	444, 915, 1407, 1562, 1855
BstDSI	CCRYGG	3 cut(s)	1015, 1777, 1887
BstEII	GGTNACC	1 cut(s)	783
BstF5I	GGATG	7 cut(s)	22, 256, 367, 1244, 1601, 1626, 1977
BstFNI	CGCG	4 cut(s)	33, 1008, 1779, 1889
BstH2I	RGCGCY	2 cut(s)	58, 1639
BstHHI	GCGC	5 cut(s)	33, 57, 1428, 1638, 1729
BstMCI	CGRYCG	1 cut(s)	814
BstNI	CCWGG	2 cut(s)	1251, 1376
BstNSI	RCATGY	1 cut(s)	1079
BstPI	GGTNACC	1 cut(s)	783
BstSCI	CCNGG	2 cut(s)	1249, 1374
BstSFI	CTRYAG	1 cut(s)	1737
BstSLI	GKGCMC	1 cut(s)	1866
BstUI	CGCG	4 cut(s)	33, 1008, 1779, 1889
BstV1I	GCAGC	2 cut(s)	397, 1723
BstV2I	GAAGAC	3 cut(s)	128, 2090, 2124
BstX2I	RGATCY	3 cut(s)	1216, 1416, 2190
BstYI	RGATCY	3 cut(s)	1216, 1416, 2190
Bsu15I	ATCGAT	1 cut(s)	45
BsuI	GTATCC	1 cut(s)	1922
BsuRI	GGCC	9 cut(s)	230, 430, 624, 765, 1014, 1032, 1511, 1701, 2138
BsuTUI	ATCGAT	1 cut(s)	45
BtgI	CCRYGG	3 cut(s)	1015, 1777, 1887
BtrI	CACGTC	2 cut(s)	796, 964
BtsCI	GGATG	7 cut(s)	22, 256, 367, 1244, 1601, 1626, 1977
BtsI	GCAGTG	2 cut(s)	1309, 1902
BtsIMutI	CAGTG	7 cut(s)	45, 75, 229, 652, 687, 1309, 1902
BveI	ACCTGC	2 cut(s)	598, 1739
Cac8I	GCNNGC	5 cut(s)	66, 83, 676, 767, 1699
CfoI	GCGC	5 cut(s)	33, 57, 1428, 1638, 1729
Cfr10I	RCCGGY	2 cut(s)	260, 430
Cfr13I	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1781
Cfr42I	CCGCGG	2 cut(s)	1780, 1890
ClaI	ATCGAT	1 cut(s)	45
CseI	GACGC	2 cut(s)	539, 1014
CsiI	ACCWGGT	1 cut(s)	1374
Csp6I	GTAC	5 cut(s)	856, 927, 1071, 1379, 2064
CviQI	GTAC	5 cut(s)	856, 927, 1071, 1379, 2064
DdeI	CTNAG	5 cut(s)	444, 915, 1407, 1562, 1855
DinI	GGCGCC	1 cut(s)	56
DriI	GACNNNNNGTC	1 cut(s)	827
EaeI	YGGCCR	4 cut(s)	763, 1012, 1509, 2136
Eam1104I	CTCTTC	7 cut(s)	605, 807, 834, 1366, 1469, 1595, 1916
Eam1105I	GACNNNNNGTC	1 cut(s)	827
EarI	CTCTTC	7 cut(s)	605, 807, 834, 1366, 1469, 1595, 1916
Ecl136II	GAGCTC	2 cut(s)	1462, 1854
Eco130I	CCWWGG	3 cut(s)	192, 300, 944
Eco147I	AGGCCT	2 cut(s)	624, 1032
Eco24I	GRGCYC	4 cut(s)	87, 1112, 1464, 1856
Eco31I	GGTCTC	2 cut(s)	1649, 2117
Eco47I	GGWCC	4 cut(s)	218, 587, 661, 1781
Eco47III	AGCGCT	1 cut(s)	1637
Eco53kI	GAGCTC	2 cut(s)	1462, 1854
Eco57I	CTGAAG	2 cut(s)	167, 327
Eco88I	CYCGRG	4 cut(s)	86, 1034, 1457, 1532
Eco91I	GGTNACC	1 cut(s)	783
EcoICRI	GAGCTC	2 cut(s)	1462, 1854
EcoO109I	RGGNCCY	1 cut(s)	218
EcoO65I	GGTNACC	1 cut(s)	783
EcoRII	CCWGG	2 cut(s)	1249, 1374
EcoT14I	CCWWGG	3 cut(s)	192, 300, 944
EcoT38I	GRGCYC	4 cut(s)	87, 1112, 1464, 1856
EgeI	GGCGCC	1 cut(s)	56
EheI	GGCGCC	1 cut(s)	56
ErhI	CCWWGG	3 cut(s)	192, 300, 944
Esp3I	CGTCTC	2 cut(s)	954, 1987
FaqI	GGGAC	3 cut(s)	204, 834, 1601
FauI	CCCGC	4 cut(s)	73, 74, 1536, 1627
FauNDI	CATATG	2 cut(s)	744, 2002
FbaI	TGATCA	3 cut(s)	883, 1080, 1093
Fnu4HI	GCNGC	5 cut(s)	411, 1052, 1429, 1737, 1887
FokI	GGATG	7 cut(s)	9, 263, 374, 1231, 1588, 1613, 1984
FriOI	GRGCYC	4 cut(s)	87, 1112, 1464, 1856
Fsp4HI	GCNGC	5 cut(s)	411, 1052, 1429, 1737, 1887
FspBI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068
GlaI	GCGC	5 cut(s)	32, 56, 1427, 1637, 1728
GluI	GCNGC	5 cut(s)	411, 1052, 1429, 1737, 1887
GsaI	CCCAGC	1 cut(s)	1161
HaeII	RGCGCY	2 cut(s)	58, 1639
HaeIII	GGCC	9 cut(s)	230, 430, 624, 765, 1014, 1032, 1511, 1701, 2138
HapII	CCGG	4 cut(s)	231, 261, 431, 540
HgaI	GACGC	2 cut(s)	539, 1014
HhaI	GCGC	5 cut(s)	33, 57, 1428, 1638, 1729
Hin1I	GRCGYC	1 cut(s)	55
Hin6I	GCGC	5 cut(s)	31, 55, 1426, 1636, 1727
HinP1I	GCGC	5 cut(s)	31, 55, 1426, 1636, 1727
HincII	GTYRAC	2 cut(s)	240, 574
HindII	GTYRAC	2 cut(s)	240, 574
HindIII	AAGCTT	1 cut(s)	128
HpaII	CCGG	4 cut(s)	231, 261, 431, 540
HphI	GGTGA	7 cut(s)	124, 527, 691, 698, 777, 1543, 1570
Hpy166II	GTNNAC	8 cut(s)	160, 240, 574, 664, 832, 1073, 1194, 1744
Hpy188I	TCNGA	6 cut(s)	501, 892, 1281, 1335, 2031, 2048
Hpy8I	GTNNAC	8 cut(s)	160, 240, 574, 664, 832, 1073, 1194, 1744
Hpy99I	CGWCG	3 cut(s)	555, 611, 1008
HpyAV	CCTTC	5 cut(s)	304, 1408, 1633, 1795, 2000
HpyCH4IV	ACGT	5 cut(s)	242, 795, 925, 963, 1980
HpyCH4V	TGCA	9 cut(s)	188, 201, 358, 674, 923, 1063, 1228, 1244, 1739
HpyF3I	CTNAG	5 cut(s)	444, 915, 1407, 1562, 1855
HpySE526I	ACGT	5 cut(s)	242, 795, 925, 963, 1980
Hsp92I	GRCGYC	1 cut(s)	55
HspAI	GCGC	5 cut(s)	31, 55, 1426, 1636, 1727
KasI	GGCGCC	1 cut(s)	54
KflI	GGGWCCC	1 cut(s)	218
Kpn2I	TCCGGA	1 cut(s)	539
KpnI	GGTACC	2 cut(s)	1382, 2067
Ksp22I	TGATCA	3 cut(s)	883, 1080, 1093
KspI	CCGCGG	2 cut(s)	1780, 1890
LguI	GCTCTTC	1 cut(s)	1469
LmnI	GCTCC	4 cut(s)	171, 1107, 1734, 1779
Lsp1109I	GCAGC	2 cut(s)	397, 1723
LweI	GCATC	5 cut(s)	210, 1215, 1253, 1557, 1600
MabI	ACCWGGT	1 cut(s)	1374
MaeI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068
MaeII	ACGT	5 cut(s)	242, 795, 925, 963, 1980
MaeIII	GTNAC	6 cut(s)	112, 433, 783, 1253, 1304, 1880
MbiI	CCGCTC	1 cut(s)	1661
MfeI	CAATTG	2 cut(s)	728, 849
MflI	RGATCY	3 cut(s)	1216, 1416, 2190
MhlI	GDGCHC	6 cut(s)	87, 643, 1112, 1464, 1856, 1866
MlsI	TGGCCA	2 cut(s)	765, 1511
MluCI	AATT	6 cut(s)	330, 728, 849, 1258, 1385, 2085
MluNI	TGGCCA	2 cut(s)	765, 1511
Mly113I	GGCGCC	1 cut(s)	55
MlyI	GAGTC	6 cut(s)	328, 567, 623, 853, 909, 1179
MmeI	TCCRAC	2 cut(s)	1629, 2153
Mox20I	TGGCCA	2 cut(s)	765, 1511
MroI	TCCGGA	1 cut(s)	539
MscI	TGGCCA	2 cut(s)	765, 1511
MseI	TTAA	4 cut(s)	285, 333, 1202, 1505
MslI	CAYNNNNRTG	2 cut(s)	209, 1302
Msp20I	TGGCCA	2 cut(s)	765, 1511
MspA1I	CMGCKG	2 cut(s)	1779, 1889
MspI	CCGG	4 cut(s)	231, 261, 431, 540
MspR9I	CCNGG	2 cut(s)	1251, 1376
MunI	CAATTG	2 cut(s)	728, 849
MvaI	CCWGG	2 cut(s)	1251, 1376
MvnI	CGCG	4 cut(s)	33, 1008, 1779, 1889
NarI	GGCGCC	1 cut(s)	55
NdeI	CATATG	2 cut(s)	744, 2002
NmeAIII	GCCGAG	3 cut(s)	7, 462, 581
NmuCI	GTSAC	4 cut(s)	112, 433, 783, 1304
NspI	RCATGY	1 cut(s)	1079
OliI	CACNNNNGTG	2 cut(s)	209, 1302
PaeR7I	CTCGAG	2 cut(s)	86, 1034
PceI	AGGCCT	2 cut(s)	624, 1032
PciI	ACATGT	1 cut(s)	1075
PciSI	GCTCTTC	1 cut(s)	1469
PcsI	WCGNNNNNNNCGW	1 cut(s)	1012
PfeI	GAWTC	4 cut(s)	472, 723, 2020, 2214
PflFI	GACNNNGTC	1 cut(s)	2128
PflMI	CCANNNNNTGG	2 cut(s)	1375, 2145
PkrI	GCNGC	5 cut(s)	412, 1053, 1430, 1738, 1888
PleI	GAGTC	6 cut(s)	327, 566, 623, 852, 908, 1178
PluTI	GGCGCC	1 cut(s)	58
PpsI	GAGTC	6 cut(s)	327, 566, 623, 852, 908, 1178
Ppu21I	YACGTR	1 cut(s)	926
PpuMI	RGGWCCY	1 cut(s)	218
PscI	ACATGT	1 cut(s)	1075
PsiI	TTATAA	1 cut(s)	1134
Psp124BI	GAGCTC	2 cut(s)	1464, 1856
Psp1406I	AACGTT	1 cut(s)	242
Psp5II	RGGWCCY	1 cut(s)	218
Psp6I	CCWGG	2 cut(s)	1249, 1374
PspEI	GGTNACC	1 cut(s)	783
PspFI	CCCAGC	1 cut(s)	1157
PspGI	CCWGG	2 cut(s)	1249, 1374
PspPI	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1781
PspPPI	RGGWCCY	1 cut(s)	218
PspXI	VCTCGAGB	1 cut(s)	86
PstI	CTGCAG	1 cut(s)	1741
PsuI	RGATCY	3 cut(s)	1216, 1416, 2190
PsyI	GACNNNGTC	1 cut(s)	2128
RsaI	GTAC	5 cut(s)	857, 928, 1072, 1380, 2065
RsaNI	GTAC	5 cut(s)	856, 927, 1071, 1379, 2064
RseI	CAYNNNNRTG	2 cut(s)	209, 1302
SacI	GAGCTC	2 cut(s)	1464, 1856
SacII	CCGCGG	2 cut(s)	1780, 1890
SapI	GCTCTTC	1 cut(s)	1469
SaqAI	TTAA	4 cut(s)	285, 333, 1202, 1505
SatI	GCNGC	5 cut(s)	411, 1052, 1429, 1737, 1887
Sau96I	GGNCC	6 cut(s)	218, 228, 428, 587, 661, 1781
SchI	GAGTC	6 cut(s)	328, 567, 623, 853, 909, 1179
ScrFI	CCNGG	2 cut(s)	1251, 1376
SduI	GDGCHC	6 cut(s)	87, 643, 1112, 1464, 1856, 1866
SexAI	ACCWGGT	1 cut(s)	1374
SfaNI	GCATC	5 cut(s)	210, 1215, 1253, 1557, 1600
SfcI	CTRYAG	1 cut(s)	1737
SfoI	GGCGCC	1 cut(s)	56
Sfr274I	CTCGAG	2 cut(s)	86, 1034
Sfr303I	CCGCGG	2 cut(s)	1780, 1890
SgrBI	CCGCGG	2 cut(s)	1780, 1890
SinI	GGWCC	4 cut(s)	218, 587, 661, 1781
SlaI	CTCGAG	2 cut(s)	86, 1034
SmiMI	CAYNNNNRTG	2 cut(s)	209, 1302
SmlI	CTYRAG	5 cut(s)	86, 1034, 1220, 1471, 1542
SmoI	CTYRAG	5 cut(s)	86, 1034, 1220, 1471, 1542
SpeI	ACTAGT	2 cut(s)	635, 1067
Sse9I	AATT	6 cut(s)	330, 728, 849, 1258, 1385, 2085
SseBI	AGGCCT	2 cut(s)	624, 1032
SspDI	GGCGCC	1 cut(s)	54
SspI	AATATT	1 cut(s)	1961
SspMI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068
SstI	GAGCTC	2 cut(s)	1464, 1856
StuI	AGGCCT	2 cut(s)	624, 1032
StyD4I	CCNGG	2 cut(s)	1249, 1374
StyI	CCWWGG	3 cut(s)	192, 300, 944
TaiI	ACGT	5 cut(s)	245, 798, 928, 966, 1983
TaqII	GACCGA	1 cut(s)	800
TasI	AATT	6 cut(s)	330, 728, 849, 1258, 1385, 2085
TatI	WGTACW	1 cut(s)	1070
TauI	GCSGC	3 cut(s)	1054, 1431, 1889
TfiI	GAWTC	4 cut(s)	472, 723, 2020, 2214
Tru1I	TTAA	4 cut(s)	285, 333, 1202, 1505
Tru9I	TTAA	4 cut(s)	285, 333, 1202, 1505
TscAI	CASTG	7 cut(s)	45, 82, 229, 652, 694, 1309, 1909
TseFI	GTSAC	4 cut(s)	112, 433, 783, 1304
TseI	GCWGC	2 cut(s)	410, 1736
Tsp45I	GTSAC	4 cut(s)	112, 433, 783, 1304
TspGWI	ACGGA	2 cut(s)	600, 838
TspRI	CASTG	7 cut(s)	45, 82, 229, 652, 694, 1309, 1909
Tth111I	GACNNNGTC	1 cut(s)	2128
Van91I	CCANNNNNTGG	2 cut(s)	1375, 2145
VpaK11BI	GGWCC	4 cut(s)	218, 587, 661, 1781
XapI	RAATTY	2 cut(s)	1385, 2085
XceI	RCATGY	1 cut(s)	1079
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1873
XhoI	CTCGAG	2 cut(s)	86, 1034
XmaJI	CCTAGG	1 cut(s)	944
XspI	CTAG	6 cut(s)	324, 626, 636, 755, 945, 1068

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.