Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0004939

Physical Location & Seq

Genomic Coordinates Forward (+)

36497906 .. 36500964

Gene Structure 3059 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0332900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGATGTTCATGAGGAGCTGCACCAAAATTGCACAAGTCTCCCTAGCTTTGCTAATGCTACTTGGTGTGGAAGCAGCCACTGCTTCAGAGTTTAACTACGGCGAGGCTTTAGACAAGAGTTTGCTCTTTTTCGAGGCACAAAGATCTGGTAAACTGCTCCCAAACCAGCGAGTCAAGTGGCGCAGTGACTCAGGACTTAAGGATGGCCTAGCTCAAGGGGTGGACCTGGTTGGAGGGTATTATGATGCAGGGGATCATGTGAAATTTGGACTACCAATGGCATTCACAGTGACAATGCTTTCATGGGGAGCTATTGAGTTCAGGAAGGAGATCACAGATTTAGACCAATTAGGTCAGACATTATGGGCCATTAGATGGGGCACTGACTATTTCATCAAAGCACATCCACAGCCTAATGTTCTTTGGGGACAGGTAGGAGATGGGAACTCTGATCACTATTGTTGGGAGCGCGCAGAGGACATGACAACTCCAAGAAATGCTTACAAAATTGATGAAAATCATCCCGGTTCAGACATTGCTGGTGAAACTGCAGCTGCCTTGGCCTCAGCTGCCATAGCTTTCAAGCCTTACAACTCTTCCTACTCCAATCTCCTCTTAGTTCATGCAAAACAGCTTTTCTCATTTGCAGATAGATTCCGAGGATTATATGATGAATCCATTGAAGATGCTAAGGACTTCTACACCTCATCGGGTTACTCCGACGAGCTACTATGGGCTGCGGCATGGCTCTACGAAGCAACCAACGATGACTACTACCTCAAGTATGTGGTGGACAATGCCGTGTATATGGGTGGAACTGGATGGTCAGTCAAAGAGTTTTCTTGGGATAACAAATATGCTGGTGTCCAAATCCTTCTCACAAAGGTTTTGTTAGAGGGAAGAGGTGGTGCATATACTTCCACACTGAAACAATATCAGGCCAAAGCAGATTACTTTGCCTGTGCTTGTCTGCAGAAAAATGATGGCTACAATGTCCACACAACTCCTGGGGGCTTGTTATACGTGCGTGAATGGAACAACTTGCAGTATGTTACTTCTGCTTCGTTTCTTCTAGCAGTTTACTCCGATTATCTCTCTGCTGCAAATGCCAAGCTCAATTGTCCGGAAGGACAAATTCAACCTCAAGAGGTCCTCAACTTTGCAAAGTCTCAGGTTGACTACATTCTTGGTAAAAACCCCAAGTCAATGAGCTACATAGTTGGGTATGGAGCAAAGTATCCAGTTCATGTACACCACAGAGATGCTTCCATTCCTTCTATATCAGTTCTTCATGCTGTGGTTGGATGTGTGCAAGGATTTGAGATATGGTATCACCGCACTGAGGGAAATCCTAATGTCGTCTATGGGGCACTTGTGGGAGGTCCTGACCAGAATGACAACTTCTCCGATGACCGCTCCAACTATGAAGGGACAGAGCCTACAATTTCTGGCACTGGTCCCCTAGTAGGCCTCTTCTCTAAGCTACAGAGTTTAAATGGTGGTTTCAATAGAGGATCACCAAAATCCCATACACCCACACCAAGTGCCTATCACCCTGAAACAACAGCACCCCCAAAAAAATCAGATACTCCTATCAAATTCCTTCACTCTATAACTAGCACATGGACTGTTGCAAAAACAAGTTATTATCGACACAAGGTGATACTAAAGAACACATCCCAGAAACCGATAACAAATGTGAAGCTGGTGCTTGGAAACCTCGAAGGGCCGTTATGGGGTCTCTCTCCAACTCCACAGAAGAACACATATGAGCTTCCTCAATGGCAGAAAGTCCTGCAGCCTGGCGCCGAGTGCACTTTTGTTTACGTTCAAGGTGGCCCTCAGGCAAAGATATCTATTCAAAGCTACAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009555 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0010016 GO:0010152 GO:0010229 GO:0010468 GO:0010556 GO:0010622 GO:0010769 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0022603 GO:0022604 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0040008 GO:0043900 GO:0045595 GO:0048229 GO:0048281 GO:0048283 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048445 GO:0048467 GO:0048481 GO:0048482 GO:0048608 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051252 GO:0051510 GO:0060255 GO:0060284 GO:0061458 GO:0065007 GO:0080090 GO:0080092 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04013 ko04022 ko04371 ko05418 map04013 map04022 map04371 map05418

Pfam Domains

Protein Families

SRF-TF

Protein Analysis

624

Amino Acids

69.19

Weight (kDa)

6.22

Isoelectric Point (pI)

30.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_9	PF00759	33 - 491	1e-167	Glycosyl hydrolase family 9
CBM49	PF09478	532 - 611	1.2e-22	Carbohydrate binding domain CBM49

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004939)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77950 AT1G77950 AT1G77950 AT1G77950 AT1G77980
fragaria_vesca	FvH4_5g38110 FvH4_5g38110
malus_domestica	MD08G1177000.v1.1 MD08G1177100.v1.1 MD15G1362500.v1.1
prunus_persica	Prupe.1G511300_v2.0.a1
pyrus_communis	pycom08g15190 pycom15g32540
rosa_chinensis	RchiOBHm_Chr7g0240061 RchiOBHm_Chr7g0240131
rosa_laevigata	RLG00000000708
rosa_multiflora	Rmu_sc0009928.1_g000004
rosa_roxburghii	Rroxscaffold_3G00220460
rosa_rugosa	Rorug04G0113100 Rorug07G0332600 Rorug07G0332700 Rorug07G0332700 Rorug07G0332800 Rorug07G0332900
rosa_samantha	Rh7AG486000 Rh7BG459300 Rh7CG503400 Rh7DG471800
rosa_wichuraiana	Rw7G040760 Rw7G040830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1805
AccB7I	CCANNNNNTGG	1 cut(s)	375
AccBSI	CCGCTC	1 cut(s)	1416
AccII	CGCG	1 cut(s)	471
AccIII	TCCGGA	1 cut(s)	1123
AciI	CCGC	3 cut(s)	740, 1336, 1414
AclWI	GGATC	2 cut(s)	261, 1522
AcsI	RAATTY	3 cut(s)	263, 1134, 1598
AcuI	CTGAAG	1 cut(s)	69
AcyI	GRCGYC	1 cut(s)	1806
AdeI	CACNNNGTG	2 cut(s)	1544, 1660
AfaI	GTAC	1 cut(s)	1251
AfiI	CCNNNNNNNGG	4 cut(s)	375, 1342, 1466, 1736
AflII	CTTAAG	1 cut(s)	197
AgsI	TTSAA	6 cut(s)	583, 683, 1139, 1507, 1832, 1862
AjnI	CCWGG	3 cut(s)	225, 1006, 1801
Alw21I	GWGCWC	1 cut(s)	1817
Alw26I	GTCTC	3 cut(s)	43, 1173, 1745
Alw44I	GTGCAC	1 cut(s)	1813
AlwI	GGATC	2 cut(s)	261, 1522
AlwNI	CAGNNNCTG	1 cut(s)	80
Aor13HI	TCCGGA	1 cut(s)	1123
AoxI	GGCC	7 cut(s)	205, 366, 561, 939, 1468, 1727, 1837
ApaLI	GTGCAC	1 cut(s)	1813
ApeKI	GCWGC	8 cut(s)	18, 74, 551, 554, 569, 737, 1100, 1798
ApoI	RAATTY	3 cut(s)	263, 1134, 1598
AspLEI	GCGC	4 cut(s)	183, 471, 473, 1808
AspS9I	GGNCC	7 cut(s)	223, 366, 1150, 1382, 1457, 1727, 1838
AsuC2I	CCSGG	1 cut(s)	525
AsuHPI	GGTGA	5 cut(s)	554, 1325, 1509, 1544, 1672
AvaII	GGWCC	4 cut(s)	223, 1150, 1382, 1457
AxyI	CCTNAGG	1 cut(s)	1842
BaeGI	GKGCMC	3 cut(s)	383, 1372, 1817
BanI	GGYRCC	1 cut(s)	1805
Bbv12I	GWGCWC	1 cut(s)	1817
BbvCI	CCTCAGC	1 cut(s)	565
BbvI	GCAGC	8 cut(s)	5, 86, 541, 556, 563, 724, 1087, 1810
BccI	CCATC	5 cut(s)	197, 369, 434, 816, 977
BceAI	ACGGC	3 cut(s)	115, 785, 1714
BciT130I	CCWGG	3 cut(s)	227, 1008, 1803
BciVI	GTATCC	1 cut(s)	1248
BclI	TGATCA	1 cut(s)	451
BcnI	CCSGG	1 cut(s)	525
BcoDI	GTCTC	3 cut(s)	43, 1173, 1745
BfaI	CTAG	5 cut(s)	44, 209, 1073, 1463, 1617
BfmI	CTRYAG	4 cut(s)	549, 971, 1484, 1796
BfoI	RGCGCY	1 cut(s)	1809
BfrI	CTTAAG	1 cut(s)	197
BfuI	GTATCC	1 cut(s)	1248
BglII	AGATCT	1 cut(s)	143
BisI	GCNGC	9 cut(s)	19, 75, 552, 555, 570, 738, 741, 1101, 1799
BlsI	GCNGC	9 cut(s)	20, 76, 553, 556, 571, 739, 742, 1102, 1800
Bme1390I	CCNGG	4 cut(s)	227, 525, 1008, 1803
Bme18I	GGWCC	4 cut(s)	223, 1150, 1382, 1457
BmgT120I	GGNCC	7 cut(s)	223, 366, 1150, 1382, 1457, 1727, 1838
BmiI	GGNNCC	2 cut(s)	1459, 1807
BmrFI	CCNGG	4 cut(s)	227, 525, 1008, 1803
BmsI	GCATC	3 cut(s)	235, 676, 1252
Bpu10I	CCTNAGC	2 cut(s)	565, 690
BpuEI	CTTGAG	3 cut(s)	198, 764, 1128
BpuMI	CCSGG	1 cut(s)	525
BsaAI	YACGTR	1 cut(s)	1024
BsaBI	GATNNNNATC	1 cut(s)	516
BsaHI	GRCGYC	1 cut(s)	1806
BsaI	GGTCTC	1 cut(s)	1745
BsaJI	CCNNGG	3 cut(s)	558, 658, 1007
BsaWI	WCCGGW	1 cut(s)	1123
BsaXI	ACNNNNNCTCC	2 cut(s)	1388, 1418
Bsc4I	CCNNNNNNNGG	4 cut(s)	375, 1342, 1466, 1736
Bse1I	ACTGG	3 cut(s)	823, 1241, 1459
Bse21I	CCTNAGG	1 cut(s)	1842
Bse3DI	GCAATG	1 cut(s)	534
Bse8I	GATNNNNATC	1 cut(s)	516
BseAI	TCCGGA	1 cut(s)	1123
BseBI	CCWGG	3 cut(s)	227, 1008, 1803
BseDI	CCNNGG	3 cut(s)	558, 658, 1007
BseGI	GGATG	6 cut(s)	208, 403, 520, 827, 1310, 1676
BseJI	GATNNNNATC	1 cut(s)	516
BseLI	CCNNNNNNNGG	4 cut(s)	375, 1342, 1466, 1736
BseMI	GCAATG	1 cut(s)	534
BseMII	CTCAG	5 cut(s)	204, 579, 1184, 1332, 1856
BseNI	ACTGG	3 cut(s)	823, 1241, 1459
BsePI	GCGCGC	1 cut(s)	469
BseRI	GAGGAG	2 cut(s)	28, 602
BseSI	GKGCMC	3 cut(s)	383, 1372, 1817
BseXI	GCAGC	8 cut(s)	5, 86, 541, 556, 563, 724, 1087, 1810
BsgI	GTGCAG	1 cut(s)	4
Bsh1236I	CGCG	1 cut(s)	471
BshFI	GGCC	7 cut(s)	207, 368, 563, 941, 1470, 1729, 1839
BshNI	GGYRCC	1 cut(s)	1805
BsiHKAI	GWGCWC	1 cut(s)	1817
BsiSI	CCGG	2 cut(s)	525, 1124
BslFI	GGGAC	3 cut(s)	441, 1443, 1444
BslI	CCNNNNNNNGG	4 cut(s)	375, 1342, 1466, 1736
BsmAI	GTCTC	3 cut(s)	43, 1173, 1745
BsmFI	GGGAC	3 cut(s)	441, 1443, 1444
BsmI	GAATGC	1 cut(s)	281
BsnI	GGCC	7 cut(s)	207, 368, 563, 941, 1470, 1729, 1839
Bso31I	GGTCTC	1 cut(s)	1745
Bsp1286I	GDGCHC	3 cut(s)	383, 1372, 1817
Bsp13I	TCCGGA	1 cut(s)	1123
Bsp1407I	TGTACA	1 cut(s)	1249
Bsp143I	GATC	5 cut(s)	143, 253, 330, 451, 1514
BspACI	CCGC	3 cut(s)	740, 1336, 1414
BspANI	GGCC	7 cut(s)	207, 368, 563, 941, 1470, 1729, 1839
BspCNI	CTCAG	5 cut(s)	203, 578, 1183, 1333, 1855
BspEI	TCCGGA	1 cut(s)	1123
BspFNI	CGCG	1 cut(s)	471
BspHI	TCATGA	1 cut(s)	9
BspLI	GGNNCC	2 cut(s)	1459, 1807
BspMAI	CTGCAG	3 cut(s)	553, 975, 1800
BspPI	GGATC	2 cut(s)	261, 1522
BspT107I	GGYRCC	1 cut(s)	1805
BspTI	CTTAAG	1 cut(s)	197
BspTNI	GGTCTC	1 cut(s)	1745
BsrBI	CCGCTC	1 cut(s)	1416
BsrDI	GCAATG	1 cut(s)	534
BsrGI	TGTACA	1 cut(s)	1249
BsrI	ACTGG	3 cut(s)	823, 1241, 1459
BssECI	CCNNGG	3 cut(s)	558, 658, 1007
BssHII	GCGCGC	1 cut(s)	469
BssMI	GATC	5 cut(s)	143, 253, 330, 451, 1514
BssNI	GRCGYC	1 cut(s)	1806
BssT1I	CCWWGG	1 cut(s)	558
Bst2UI	CCWGG	3 cut(s)	227, 1008, 1803
Bst4CI	ACNGT	2 cut(s)	289, 1630
Bst6I	CTCTTC	3 cut(s)	601, 895, 1478
BstACI	GRCGYC	1 cut(s)	1806
BstAFI	CTTAAG	1 cut(s)	197
BstAPI	GCANNNNNTGC	1 cut(s)	80
BstAUI	TGTACA	1 cut(s)	1249
BstBAI	YACGTR	1 cut(s)	1024
BstC8I	GCNNGC	1 cut(s)	471
BstDEI	CTNAG	8 cut(s)	190, 565, 616, 690, 1170, 1341, 1479, 1842
BstF5I	GGATG	6 cut(s)	208, 403, 520, 827, 1310, 1676
BstFNI	CGCG	1 cut(s)	471
BstH2I	RGCGCY	1 cut(s)	1809
BstHHI	GCGC	4 cut(s)	183, 471, 473, 1808
BstKTI	GATC	5 cut(s)	146, 256, 333, 454, 1517
BstMAI	GTCTC	3 cut(s)	43, 1173, 1745
BstMBI	GATC	5 cut(s)	143, 253, 330, 451, 1514
BstMWI	GCNNNNNNNGC	6 cut(s)	80, 560, 569, 575, 1106, 1812
BstNI	CCWGG	3 cut(s)	227, 1008, 1803
BstSCI	CCNGG	4 cut(s)	225, 523, 1006, 1801
BstSFI	CTRYAG	4 cut(s)	549, 971, 1484, 1796
BstSLI	GKGCMC	3 cut(s)	383, 1372, 1817
BstUI	CGCG	1 cut(s)	471
BstV1I	GCAGC	8 cut(s)	5, 86, 541, 556, 563, 724, 1087, 1810
BstX2I	RGATCY	1 cut(s)	143
BstYI	RGATCY	1 cut(s)	143
Bsu36I	CCTNAGG	1 cut(s)	1842
BsuI	GTATCC	1 cut(s)	1248
BsuRI	GGCC	7 cut(s)	207, 368, 563, 941, 1470, 1729, 1839
BtsCI	GGATG	6 cut(s)	208, 403, 520, 827, 1310, 1676
BtsI	GCAGTG	2 cut(s)	78, 190
BtsIMutI	CAGTG	7 cut(s)	78, 190, 294, 381, 923, 1338, 1452
Cac8I	GCNNGC	1 cut(s)	471
CaiI	CAGNNNCTG	1 cut(s)	80
CciI	TCATGA	1 cut(s)	9
CfoI	GCGC	4 cut(s)	183, 471, 473, 1808
Cfr13I	GGNCC	7 cut(s)	223, 366, 1150, 1382, 1457, 1727, 1838
CsiI	ACCWGGT	1 cut(s)	225
Csp6I	GTAC	1 cut(s)	1250
CviAII	CATG	9 cut(s)	10, 257, 303, 481, 623, 744, 1247, 1292, 1623
CviQI	GTAC	1 cut(s)	1250
DdeI	CTNAG	8 cut(s)	190, 565, 616, 690, 1170, 1341, 1479, 1842
DinI	GGCGCC	1 cut(s)	1807
DpnI	GATC	5 cut(s)	145, 255, 332, 453, 1516
DpnII	GATC	5 cut(s)	143, 253, 330, 451, 1514
DraI	TTTAAA	1 cut(s)	1494
DraIII	CACNNNGTG	2 cut(s)	1544, 1660
Eam1104I	CTCTTC	3 cut(s)	601, 895, 1478
EarI	CTCTTC	3 cut(s)	601, 895, 1478
Eco130I	CCWWGG	1 cut(s)	558
Eco147I	AGGCCT	1 cut(s)	1470
Eco31I	GGTCTC	1 cut(s)	1745
Eco32I	GATATC	1 cut(s)	1854
Eco47I	GGWCC	4 cut(s)	223, 1150, 1382, 1457
Eco57I	CTGAAG	1 cut(s)	69
Eco81I	CCTNAGG	1 cut(s)	1842
EcoO109I	RGGNCCY	2 cut(s)	1150, 1382
EcoRII	CCWGG	3 cut(s)	225, 1006, 1801
EcoRV	GATATC	1 cut(s)	1854
EcoT14I	CCWWGG	1 cut(s)	558
EgeI	GGCGCC	1 cut(s)	1807
EheI	GGCGCC	1 cut(s)	1807
ErhI	CCWWGG	1 cut(s)	558
FaeI	CATG	9 cut(s)	13, 260, 306, 484, 626, 747, 1250, 1295, 1626
FalI	AAGNNNNNCTT	2 cut(s)	484, 516
FaqI	GGGAC	3 cut(s)	441, 1443, 1444
FatI	CATG	9 cut(s)	9, 256, 302, 480, 622, 743, 1246, 1291, 1622
FauNDI	CATATG	1 cut(s)	1768
FbaI	TGATCA	1 cut(s)	451
Fnu4HI	GCNGC	9 cut(s)	19, 75, 552, 555, 570, 738, 741, 1101, 1799
FokI	GGATG	6 cut(s)	215, 390, 507, 834, 1317, 1663
Fsp4HI	GCNGC	9 cut(s)	19, 75, 552, 555, 570, 738, 741, 1101, 1799
FspBI	CTAG	5 cut(s)	44, 209, 1073, 1463, 1617
GlaI	GCGC	4 cut(s)	182, 470, 472, 1807
GluI	GCNGC	9 cut(s)	19, 75, 552, 555, 570, 738, 741, 1101, 1799
HaeII	RGCGCY	1 cut(s)	1809
HaeIII	GGCC	7 cut(s)	207, 368, 563, 941, 1470, 1729, 1839
HapII	CCGG	2 cut(s)	525, 1124
HhaI	GCGC	4 cut(s)	183, 471, 473, 1808
Hin1I	GRCGYC	1 cut(s)	1806
Hin1II	CATG	9 cut(s)	13, 260, 306, 484, 626, 747, 1250, 1295, 1626
Hin6I	GCGC	4 cut(s)	181, 469, 471, 1806
HinP1I	GCGC	4 cut(s)	181, 469, 471, 1806
HincII	GTYRAC	1 cut(s)	1177
HindII	GTYRAC	1 cut(s)	1177
HinfI	GANTC	4 cut(s)	171, 188, 654, 674
HpaII	CCGG	2 cut(s)	525, 1124
HphI	GGTGA	5 cut(s)	554, 1325, 1509, 1544, 1672
Hpy166II	GTNNAC	9 cut(s)	152, 223, 793, 997, 1081, 1177, 1252, 1815, 1825
Hpy188I	TCNGA	9 cut(s)	88, 357, 451, 532, 659, 721, 1087, 1408, 1585
Hpy188III	TCNNGA	6 cut(s)	10, 192, 322, 1124, 1145, 1385
Hpy8I	GTNNAC	9 cut(s)	152, 223, 793, 997, 1081, 1177, 1252, 1815, 1825
Hpy99I	CGWCG	1 cut(s)	725
HpyAV	CCTTC	7 cut(s)	319, 884, 1121, 1284, 1421, 1613, 1718
HpyCH4III	ACNGT	2 cut(s)	289, 1630
HpyCH4IV	ACGT	2 cut(s)	1023, 1827
HpyF10VI	GCNNNNNNNGC	6 cut(s)	80, 560, 569, 575, 1106, 1812
HpyF3I	CTNAG	8 cut(s)	190, 565, 616, 690, 1170, 1341, 1479, 1842
HpySE526I	ACGT	2 cut(s)	1023, 1827
Hsp92I	GRCGYC	1 cut(s)	1806
Hsp92II	CATG	9 cut(s)	13, 260, 306, 484, 626, 747, 1250, 1295, 1626
HspAI	GCGC	4 cut(s)	181, 469, 471, 1806
KasI	GGCGCC	1 cut(s)	1805
Kpn2I	TCCGGA	1 cut(s)	1123
Ksp22I	TGATCA	1 cut(s)	451
Kzo9I	GATC	5 cut(s)	143, 253, 330, 451, 1514
LmnI	GCTCC	6 cut(s)	15, 162, 308, 466, 1229, 1421
Lsp1109I	GCAGC	8 cut(s)	5, 86, 541, 556, 563, 724, 1087, 1810
LweI	GCATC	3 cut(s)	235, 676, 1252
MabI	ACCWGGT	1 cut(s)	225
MaeI	CTAG	5 cut(s)	44, 209, 1073, 1463, 1617
MaeII	ACGT	2 cut(s)	1023, 1827
MaeIII	GTNAC	4 cut(s)	185, 289, 713, 1051
MalI	GATC	5 cut(s)	145, 255, 332, 453, 1516
MbiI	CCGCTC	1 cut(s)	1416
MboI	GATC	5 cut(s)	143, 253, 330, 451, 1514
MboII	GAAGA	7 cut(s)	588, 695, 912, 1061, 1280, 1465, 1771
MfeI	CAATTG	2 cut(s)	1117, 1870
MflI	RGATCY	1 cut(s)	143
MhlI	GDGCHC	3 cut(s)	383, 1372, 1817
MluCI	AATT	9 cut(s)	27, 263, 347, 507, 1117, 1134, 1443, 1598, 1870
Mly113I	GGCGCC	1 cut(s)	1806
MlyI	GAGTC	2 cut(s)	180, 182
MmeI	TCCRAC	5 cut(s)	211, 744, 1282, 1443, 1772
MroI	TCCGGA	1 cut(s)	1123
MseI	TTAA	3 cut(s)	93, 198, 1493
MslI	CAYNNNNRTG	1 cut(s)	1260
MspA1I	CMGCKG	2 cut(s)	554, 569
MspCI	CTTAAG	1 cut(s)	197
MspI	CCGG	2 cut(s)	525, 1124
MspR9I	CCNGG	4 cut(s)	227, 525, 1008, 1803
MunI	CAATTG	2 cut(s)	1117, 1870
Mva1269I	GAATGC	1 cut(s)	281
MvaI	CCWGG	3 cut(s)	227, 1008, 1803
MvnI	CGCG	1 cut(s)	471
MwoI	GCNNNNNNNGC	6 cut(s)	80, 560, 569, 575, 1106, 1812
NarI	GGCGCC	1 cut(s)	1806
NciI	CCSGG	1 cut(s)	525
NdeI	CATATG	1 cut(s)	1768
NdeII	GATC	5 cut(s)	143, 253, 330, 451, 1514
NlaIII	CATG	9 cut(s)	13, 260, 306, 484, 626, 747, 1250, 1295, 1626
NlaIV	GGNNCC	2 cut(s)	1459, 1807
NmeAIII	GCCGAG	1 cut(s)	1834
NmuCI	GTSAC	2 cut(s)	185, 289
PagI	TCATGA	1 cut(s)	9
PauI	GCGCGC	1 cut(s)	469
PceI	AGGCCT	1 cut(s)	1470
PctI	GAATGC	1 cut(s)	281
PfeI	GAWTC	2 cut(s)	654, 674
PflMI	CCANNNNNTGG	1 cut(s)	375
PkrI	GCNGC	9 cut(s)	20, 76, 553, 556, 571, 739, 742, 1102, 1800
PleI	GAGTC	2 cut(s)	179, 182
PluTI	GGCGCC	1 cut(s)	1809
PpsI	GAGTC	2 cut(s)	179, 182
Ppu21I	YACGTR	1 cut(s)	1024
PpuMI	RGGWCCY	2 cut(s)	1150, 1382
Psp5II	RGGWCCY	2 cut(s)	1150, 1382
Psp6I	CCWGG	3 cut(s)	225, 1006, 1801
PspGI	CCWGG	3 cut(s)	225, 1006, 1801
PspN4I	GGNNCC	2 cut(s)	1459, 1807
PspPI	GGNCC	7 cut(s)	223, 366, 1150, 1382, 1457, 1727, 1838
PspPPI	RGGWCCY	2 cut(s)	1150, 1382
PstI	CTGCAG	3 cut(s)	553, 975, 1800
PstNI	CAGNNNCTG	1 cut(s)	80
PsuI	RGATCY	1 cut(s)	143
PteI	GCGCGC	1 cut(s)	469
PvuII	CAGCTG	2 cut(s)	554, 569
RsaI	GTAC	1 cut(s)	1251
RsaNI	GTAC	1 cut(s)	1250
RseI	CAYNNNNRTG	1 cut(s)	1260
SaqAI	TTAA	3 cut(s)	93, 198, 1493
SatI	GCNGC	9 cut(s)	19, 75, 552, 555, 570, 738, 741, 1101, 1799
Sau3AI	GATC	5 cut(s)	143, 253, 330, 451, 1514
Sau96I	GGNCC	7 cut(s)	223, 366, 1150, 1382, 1457, 1727, 1838
SchI	GAGTC	2 cut(s)	180, 182
ScrFI	CCNGG	4 cut(s)	227, 525, 1008, 1803
SduI	GDGCHC	3 cut(s)	383, 1372, 1817
SexAI	ACCWGGT	1 cut(s)	225
SfaNI	GCATC	3 cut(s)	235, 676, 1252
SfcI	CTRYAG	4 cut(s)	549, 971, 1484, 1796
SfoI	GGCGCC	1 cut(s)	1807
SinI	GGWCC	4 cut(s)	223, 1150, 1382, 1457
SmiMI	CAYNNNNRTG	1 cut(s)	1260
SmlI	CTYRAG	4 cut(s)	197, 213, 779, 1143
SmoI	CTYRAG	4 cut(s)	197, 213, 779, 1143
Sse9I	AATT	9 cut(s)	27, 263, 347, 507, 1117, 1134, 1443, 1598, 1870
SseBI	AGGCCT	1 cut(s)	1470
SsiI	CCGC	3 cut(s)	740, 1336, 1414
SspDI	GGCGCC	1 cut(s)	1805
SspMI	CTAG	5 cut(s)	44, 209, 1073, 1463, 1617
StuI	AGGCCT	1 cut(s)	1470
StyD4I	CCNGG	4 cut(s)	225, 523, 1006, 1801
StyI	CCWWGG	1 cut(s)	558
TaaI	ACNGT	2 cut(s)	289, 1630
TaiI	ACGT	2 cut(s)	1026, 1830
TaqI	TCGA	3 cut(s)	132, 1651, 1722
TasI	AATT	9 cut(s)	27, 263, 347, 507, 1117, 1134, 1443, 1598, 1870
TatI	WGTACW	1 cut(s)	1249
TauI	GCSGC	1 cut(s)	743
TfiI	GAWTC	2 cut(s)	654, 674
Tru1I	TTAA	3 cut(s)	93, 198, 1493
Tru9I	TTAA	3 cut(s)	93, 198, 1493
TscAI	CASTG	7 cut(s)	85, 190, 294, 388, 930, 1345, 1459
TseFI	GTSAC	2 cut(s)	185, 289
TseI	GCWGC	8 cut(s)	18, 74, 551, 554, 569, 737, 1100, 1798
Tsp45I	GTSAC	2 cut(s)	185, 289
TspDTI	ATGAA	8 cut(s)	291, 382, 528, 611, 687, 1235, 1280, 1440
TspRI	CASTG	7 cut(s)	85, 190, 294, 388, 930, 1345, 1459
Van91I	CCANNNNNTGG	1 cut(s)	375
Vha464I	CTTAAG	1 cut(s)	197
VneI	GTGCAC	1 cut(s)	1813
VpaK11BI	GGWCC	4 cut(s)	223, 1150, 1382, 1457
XapI	RAATTY	3 cut(s)	263, 1134, 1598
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1004
XspI	CTAG	5 cut(s)	44, 209, 1073, 1463, 1617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.