pycom16g03870

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
2416086 .. 2416547
462 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 321 bp
ATGCGCCTTTATTTTGTGCATGAATTGCAGTATTGTTGCTTGGTGATGAGGCTCAATATTGACTGCAATGCATGCTGCAGAAAAGTAAGAAGGATCCTCCTAAATATGAAAGAAATAGAGACACATTTGGTTGAGAAGCAGCAATGCAGGGTGAGTGTGTGTGGGAGGTTTGTTCCGGCAGATGTTGCCATAAAGTTGAGGAAAAAGATGAACCGCAGAGTTGAAATTCTAGAAATCCAAGAGTTAGATGACAGCGATGAACAAATGGAGCAAAGGGCTATGATTACTACCATTAGACCACATCAATTATATTGCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

107

Amino Acids

12.78

Weight (kDa)

8.68

Isoelectric Point (pI)

62.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 214
AclWI GGATC 2 cut(s) 88, 101
AcsI RAATTY 1 cut(s) 225
AgsI TTSAA 1 cut(s) 224
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 2 cut(s) 88, 101
ApeKI GCWGC 2 cut(s) 75, 139
ApoI RAATTY 1 cut(s) 225
AspLEI GCGC 1 cut(s) 6
AsuHPI GGTGA 2 cut(s) 55, 163
BamHI GGATCC 1 cut(s) 93
BbvI GCAGC 2 cut(s) 62, 151
BcoDI GTCTC 1 cut(s) 113
BfaI CTAG 2 cut(s) 230, 319
BfmI CTRYAG 1 cut(s) 76
BisI GCNGC 2 cut(s) 76, 140
BlsI GCNGC 2 cut(s) 77, 141
BmiI GGNNCC 1 cut(s) 95
Bse3DI GCAATG 2 cut(s) 73, 149
BseMI GCAATG 2 cut(s) 73, 149
BseXI GCAGC 2 cut(s) 62, 151
BsiSI CCGG 1 cut(s) 176
BsmAI GTCTC 1 cut(s) 113
Bsp143I GATC 1 cut(s) 93
BspACI CCGC 1 cut(s) 214
BspLI GGNNCC 1 cut(s) 95
BspMAI CTGCAG 1 cut(s) 80
BspPI GGATC 2 cut(s) 88, 101
BsrDI GCAATG 2 cut(s) 73, 149
BssMI GATC 1 cut(s) 93
BstAPI GCANNNNNTGC 3 cut(s) 25, 72, 185
BstC8I GCNNGC 1 cut(s) 73
BstHHI GCGC 1 cut(s) 6
BstKTI GATC 1 cut(s) 96
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 1 cut(s) 93
BstMWI GCNNNNNNNGC 3 cut(s) 25, 72, 185
BstNSI RCATGY 1 cut(s) 75
BstSFI CTRYAG 1 cut(s) 76
BstV1I GCAGC 2 cut(s) 62, 151
BstX2I RGATCY 1 cut(s) 93
BstYI RGATCY 1 cut(s) 93
BtgZI GCGATG 1 cut(s) 270
Cac8I GCNNGC 1 cut(s) 73
CfoI GCGC 1 cut(s) 6
CviAII CATG 2 cut(s) 20, 72
CviJI RGCY 2 cut(s) 52, 278
CviKI_1 RGCY 2 cut(s) 52, 278
DpnI GATC 1 cut(s) 95
DpnII GATC 1 cut(s) 93
EcoT22I ATGCAT 1 cut(s) 73
FaeI CATG 2 cut(s) 23, 75
FaiI YATR 6 cut(s) 21, 73, 107, 191, 281, 310
FatI CATG 2 cut(s) 19, 71
Fnu4HI GCNGC 2 cut(s) 76, 140
Fsp4HI GCNGC 2 cut(s) 76, 140
FspBI CTAG 2 cut(s) 230, 319
GlaI GCGC 1 cut(s) 5
GluI GCNGC 2 cut(s) 76, 140
HapII CCGG 1 cut(s) 176
HhaI GCGC 1 cut(s) 6
Hin1II CATG 2 cut(s) 23, 75
Hin6I GCGC 1 cut(s) 4
HinP1I GCGC 1 cut(s) 4
HpaII CCGG 1 cut(s) 176
HphI GGTGA 2 cut(s) 55, 163
Hpy188III TCNNGA 1 cut(s) 230
HpyAV CCTTC 1 cut(s) 84
HpyCH4V TGCA 6 cut(s) 19, 28, 66, 71, 78, 147
HpyF10VI GCNNNNNNNGC 3 cut(s) 25, 72, 185
Hsp92II CATG 2 cut(s) 23, 75
HspAI GCGC 1 cut(s) 4
Kzo9I GATC 1 cut(s) 93
LmnI GCTCC 1 cut(s) 268
LpnPI CCDG 2 cut(s) 133, 189
Lsp1109I GCAGC 2 cut(s) 62, 151
MaeI CTAG 2 cut(s) 230, 319
MalI GATC 1 cut(s) 95
MboI GATC 1 cut(s) 93
MflI RGATCY 1 cut(s) 93
MluCI AATT 3 cut(s) 23, 225, 305
MnlI CCTC 4 cut(s) 42, 107, 159, 192
Mph1103I ATGCAT 1 cut(s) 73
MspI CCGG 1 cut(s) 176
MwoI GCNNNNNNNGC 3 cut(s) 25, 72, 185
NdeII GATC 1 cut(s) 93
NlaIII CATG 2 cut(s) 23, 75
NlaIV GGNNCC 1 cut(s) 95
NsiI ATGCAT 1 cut(s) 73
NspI RCATGY 1 cut(s) 75
PaeI GCATGC 1 cut(s) 75
PkrI GCNGC 2 cut(s) 77, 141
PspN4I GGNNCC 1 cut(s) 95
PstI CTGCAG 1 cut(s) 80
PsuI RGATCY 1 cut(s) 93
SatI GCNGC 2 cut(s) 76, 140
Sau3AI GATC 1 cut(s) 93
SetI ASST 1 cut(s) 170
SfcI CTRYAG 1 cut(s) 76
SgeI CNNG 7 cut(s) 32, 52, 84, 160, 188, 242, 251
SphI GCATGC 1 cut(s) 75
Sse9I AATT 3 cut(s) 23, 225, 305
SsiI CCGC 1 cut(s) 214
SspI AATATT 1 cut(s) 58
SspMI CTAG 2 cut(s) 230, 319
TasI AATT 3 cut(s) 23, 225, 305
TseI GCWGC 2 cut(s) 75, 139
TspDTI ATGAA 4 cut(s) 36, 122, 224, 273
XapI RAATTY 1 cut(s) 225
XbaI TCTAGA 1 cut(s) 229
XceI RCATGY 1 cut(s) 75
XspI CTAG 2 cut(s) 230, 319
Zsp2I ATGCAT 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.