Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0002636

Physical Location & Seq

Genomic Coordinates Forward (+)

5483279 .. 5489767

Gene Structure 6489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1062 bp

ATGGAGGAAATATACAGATTGCAATCAATGGTCGACTACGGGGACACAGGGTTTCAATCGGCGGCGGAGTACGAAGACAGGGCGCCGTTGATGACGCCGGAGAATCTGATCCTTCCGCTGGATTACCGCAGCCTGCTGGTCTCTTCCGGAGCCTTTCGGGAGCACAATCATCACCATCATCAACGGGAGGCGATGTTCGGATCAAACGACTCCGTCTTGTACTCGGCAGCGTCAGAAGCCGCTTCGACAACAATCGTGCAACGCGAGGAGGACGTGCTCGGAGCCATCAAAGCCAGAATCGCGTCGCATCCGACGTACCCTAGGCTCATTCACGCATACATCGAGTGCCAGAAGGTTGGGGCGCCGCCGGAAATCGCGGGTTTCTTGGACGAAATCCGACGAAAAAACGACTTGTACAAGAAGCAGGGAGACTACTATTGTAATTCTAGTTCGATGTTTTCCTCCACGTGTTTGGGAGCTGATCCCGAGCTCGACGAGTTCATGGAAACCTACTGCGACATGTTGGTGAAGTACAGATCAGATCTATCCAGGCCTTTTGATGAAGCCACCACTTTTTTAAGCAAGATCGAAACGCAACTCACCAATCTCTGCACTTCTTCATCATCTGCTCGTGTCTCTTCCTCCGTTAGAATCCTCTCCGATGAAGGTGGTGGTATGTCATCGGATGAGGATTTCAGTGGAGGCGAAATAGATGTGCAGGAAGCTCAACAAAGAGGTGAAGATCGAGATCTCAAGGATCGGCTTATGCGTAGGTTTGGCAGTCATCTCGGAACCTTGAAGCTCGAATTCTCCAAGAAGAAGAAGATAGGAAAGCTGCCGAAAGAAGCAAGGCAAACGTTACTTGATTGGTGGAGTGTTCATTATAAATGGCCATATCCAACGGAGGCTGATAAGATTGCGCTAGCGGAATCTACGGGGCTGGATCAGAGGCAAATTAACAACTGGTTTATAAATCAGCGTAAGCGTCATTGGAGACCATCGGAGAACATGCAGTTGGCGGTGATGGATGATCTTACTGGACCATTATTTACAGATGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010033 GO:0010073 GO:0010093 GO:0010094 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048445 GO:0048449 GO:0048462 GO:0048467 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELK Homeobox_KN KNOX1 KNOX2

Protein Analysis

354

Amino Acids

40.26

Weight (kDa)

5.27

Isoelectric Point (pI)

45.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KNOX1	PF03790	95 - 137	8.4e-20	KNOX1 domain
KNOX2	PF03791	157 - 204	5.3e-26	KNOX2 domain
ELK	PF03789	250 - 271	9e-07	ELK domain
Homeobox_KN	PF05920	290 - 329	2.3e-18	Homeobox KN domain
Homeodomain	PF00046	298 - 330	8.8e-07	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002636)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23380 AT1G23380 AT1G70510 AT1G70510
fragaria_vesca	FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_4g26090 FvH4_5g05530 FvH4_5g05530
malus_domestica	MD06G1171700.v1.1 MD13G1095800.v1.1 MD14G1177200.v1.1 MD16G1097200.v1.1
prunus_persica	Prupe.1G249600_v2.0.a1 Prupe.5G171100_v2.0.a1
pyrus_communis	pycom06g15280 pycom13g08340 pycom14g14800 pycom16g08280
rosa_chinensis	RchiOBHm_Chr4g0433571 RchiOBHm_Chr7g0193251
rosa_laevigata	RLG00000004283 RLG00000006743
rosa_multiflora	Rmu_sc0017266.1_g000003
rosa_roxburghii	Rroxscaffold_3G00262250 Rroxscaffold_5G00375060
rosa_rugosa	Rorug04G0269800 Rorug07G0008500 Rorug07G0008600
rosa_samantha	Rh4AG324700 Rh4BG332400 Rh4CG347700 Rh4DG328800 Rh7AG134100 Rh7BG135100 Rh7CG138100 Rh7DG136100
rosa_wichuraiana	Rw4G028100 Rw7G011470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	885, 971
AccB1I	GGYRCC	2 cut(s)	82, 361
AccI	GTMKAC	1 cut(s)	33
AccII	CGCG	3 cut(s)	264, 302, 377
AccIII	TCCGGA	1 cut(s)	146
AciI	CCGC	9 cut(s)	62, 65, 116, 127, 240, 365, 377, 926, 1019
AclI	AACGTT	1 cut(s)	857
AclWI	GGATC	5 cut(s)	103, 208, 476, 765, 951
AcoI	YGGCCR	1 cut(s)	890
AcsI	RAATTY	1 cut(s)	806
AcvI	CACGTG	1 cut(s)	468
AcyI	GRCGYC	3 cut(s)	83, 95, 362
AfaI	GTAC	5 cut(s)	71, 221, 317, 416, 533
AfiI	CCNNNNNNNGG	1 cut(s)	118
AflIII	ACRYGT	2 cut(s)	467, 519
AgsI	TTSAA	2 cut(s)	56, 799
AjiI	CACGTC	1 cut(s)	274
AjnI	CCWGG	1 cut(s)	548
AjuI	GAANNNNNNNTTGG	2 cut(s)	998, 1030
AloI	GAACNNNNNNTCC	2 cut(s)	179, 211
AluBI	AGCT	5 cut(s)	479, 490, 725, 802, 835
AluI	AGCT	5 cut(s)	479, 490, 725, 802, 835
Alw21I	GWGCWC	3 cut(s)	165, 279, 492
Alw26I	GTCTC	4 cut(s)	145, 423, 640, 988
AlwI	GGATC	5 cut(s)	103, 208, 476, 765, 951
Ama87I	CYCGRG	1 cut(s)	485
Aor13HI	TCCGGA	1 cut(s)	146
AoxI	GGCC	2 cut(s)	551, 890
ApeKI	GCWGC	3 cut(s)	129, 227, 835
ApoI	RAATTY	1 cut(s)	806
AspA2I	CCTAGG	1 cut(s)	320
AspLEI	GCGC	3 cut(s)	85, 364, 922
AspS9I	GGNCC	1 cut(s)	1040
AsuHPI	GGTGA	5 cut(s)	164, 538, 592, 749, 1033
AsuNHI	GCTAGC	1 cut(s)	922
AvaI	CYCGRG	1 cut(s)	485
AvaII	GGWCC	1 cut(s)	1040
AvrII	CCTAGG	1 cut(s)	320
BalI	TGGCCA	1 cut(s)	892
BanI	GGYRCC	2 cut(s)	82, 361
BanII	GRGCYC	1 cut(s)	492
BauI	CACGAG	1 cut(s)	630
BbrPI	CACGTG	1 cut(s)	468
BbsI	GAAGAC	1 cut(s)	81
Bbv12I	GWGCWC	3 cut(s)	165, 279, 492
BbvI	GCAGC	3 cut(s)	141, 239, 822
BccI	CCATC	4 cut(s)	183, 293, 1006, 1018
BceAI	ACGGC	1 cut(s)	70
BcgI	CGANNNNNNTGC	2 cut(s)	769, 803
BciT130I	CCWGG	1 cut(s)	550
BcoDI	GTCTC	4 cut(s)	145, 423, 640, 988
BfaI	CTAG	3 cut(s)	321, 447, 923
BfoI	RGCGCY	2 cut(s)	86, 365
BglII	AGATCT	2 cut(s)	541, 748
BisI	GCNGC	6 cut(s)	63, 130, 228, 240, 365, 836
BlnI	CCTAGG	1 cut(s)	320
BlsI	GCNGC	6 cut(s)	64, 131, 229, 241, 366, 837
Bme1390I	CCNGG	1 cut(s)	550
Bme18I	GGWCC	1 cut(s)	1040
BmeT110I	CYCGRG	1 cut(s)	485
BmgBI	CACGTC	1 cut(s)	274
BmgT120I	GGNCC	1 cut(s)	1040
BmiI	GGNNCC	5 cut(s)	84, 151, 283, 363, 793
BmrFI	CCNGG	1 cut(s)	550
BmsI	GCATC	1 cut(s)	316
BmtI	GCTAGC	1 cut(s)	926
BpiI	GAAGAC	1 cut(s)	81
BpuEI	CTTGAG	1 cut(s)	737
BsaAI	YACGTR	1 cut(s)	468
BsaBI	GATNNNNATC	2 cut(s)	22, 747
BsaHI	GRCGYC	3 cut(s)	83, 95, 362
BsaI	GGTCTC	2 cut(s)	145, 988
BsaJI	CCNNGG	1 cut(s)	320
BsaWI	WCCGGW	1 cut(s)	146
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	1 cut(s)	118
Bse1I	ACTGG	2 cut(s)	968, 1042
Bse8I	GATNNNNATC	2 cut(s)	22, 747
BseAI	TCCGGA	1 cut(s)	146
BseBI	CCWGG	1 cut(s)	550
BseDI	CCNNGG	1 cut(s)	320
BseGI	GGATG	3 cut(s)	307, 691, 1033
BseJI	GATNNNNATC	2 cut(s)	22, 747
BseLI	CCNNNNNNNGG	1 cut(s)	118
BseNI	ACTGG	2 cut(s)	968, 1042
BseRI	GAGGAG	1 cut(s)	281
BseXI	GCAGC	3 cut(s)	141, 239, 822
BsgI	GTGCAG	2 cut(s)	595, 737
Bsh1236I	CGCG	3 cut(s)	264, 302, 377
BshFI	GGCC	2 cut(s)	553, 892
BshNI	GGYRCC	2 cut(s)	82, 361
BsiHKAI	GWGCWC	3 cut(s)	165, 279, 492
BsiHKCI	CYCGRG	1 cut(s)	485
BsiSI	CCGG	3 cut(s)	98, 147, 368
BslFI	GGGAC	1 cut(s)	56
BslI	CCNNNNNNNGG	1 cut(s)	118
BsmAI	GTCTC	4 cut(s)	145, 423, 640, 988
BsmFI	GGGAC	1 cut(s)	56
BsnI	GGCC	2 cut(s)	553, 892
Bso31I	GGTCTC	2 cut(s)	145, 988
BsoBI	CYCGRG	1 cut(s)	485
Bsp1286I	GDGCHC	3 cut(s)	165, 279, 492
Bsp13I	TCCGGA	1 cut(s)	146
Bsp1407I	TGTACA	1 cut(s)	414
BspACI	CCGC	9 cut(s)	62, 65, 116, 127, 240, 365, 377, 926, 1019
BspANI	GGCC	2 cut(s)	553, 892
BspEI	TCCGGA	1 cut(s)	146
BspFNI	CGCG	3 cut(s)	264, 302, 377
BspLI	GGNNCC	5 cut(s)	84, 151, 283, 363, 793
BspOI	GCTAGC	1 cut(s)	926
BspPI	GGATC	5 cut(s)	103, 208, 476, 765, 951
BspT107I	GGYRCC	2 cut(s)	82, 361
BspTNI	GGTCTC	2 cut(s)	145, 988
BsrGI	TGTACA	1 cut(s)	414
BsrI	ACTGG	2 cut(s)	968, 1042
BssECI	CCNNGG	1 cut(s)	320
BssNI	GRCGYC	3 cut(s)	83, 95, 362
BssSI	CACGAG	1 cut(s)	630
BssT1I	CCWWGG	1 cut(s)	320
Bst2BI	CACGAG	1 cut(s)	630
Bst2UI	CCWGG	1 cut(s)	550
Bst6I	CTCTTC	2 cut(s)	148, 643
BstACI	GRCGYC	3 cut(s)	83, 95, 362
BstAUI	TGTACA	1 cut(s)	414
BstBAI	YACGTR	1 cut(s)	468
BstC8I	GCNNGC	2 cut(s)	134, 924
BstF5I	GGATG	3 cut(s)	307, 691, 1033
BstFNI	CGCG	3 cut(s)	264, 302, 377
BstH2I	RGCGCY	2 cut(s)	86, 365
BstHHI	GCGC	3 cut(s)	85, 364, 922
BstMAI	GTCTC	4 cut(s)	145, 423, 640, 988
BstMWI	GCNNNNNNNGC	3 cut(s)	236, 290, 299
BstNI	CCWGG	1 cut(s)	550
BstNSI	RCATGY	2 cut(s)	523, 1012
BstSCI	CCNGG	1 cut(s)	548
BstUI	CGCG	3 cut(s)	264, 302, 377
BstV1I	GCAGC	3 cut(s)	141, 239, 822
BstV2I	GAAGAC	1 cut(s)	81
BstX2I	RGATCY	2 cut(s)	541, 748
BstXI	CCANNNNNNTGG	2 cut(s)	356, 472
BstYI	RGATCY	2 cut(s)	541, 748
BsuRI	GGCC	2 cut(s)	553, 892
BtgZI	GCGATG	1 cut(s)	206
BtrI	CACGTC	1 cut(s)	274
BtsCI	GGATG	3 cut(s)	307, 691, 1033
BtsIMutI	CAGTG	1 cut(s)	703
Cac8I	GCNNGC	2 cut(s)	134, 924
CfoI	GCGC	3 cut(s)	85, 364, 922
Cfr13I	GGNCC	1 cut(s)	1040
CseI	GACGC	4 cut(s)	103, 219, 291, 974
Csp6I	GTAC	5 cut(s)	70, 220, 316, 415, 532
CviAII	CATG	3 cut(s)	502, 520, 1009
CviQI	GTAC	5 cut(s)	70, 220, 316, 415, 532
DinI	GGCGCC	2 cut(s)	84, 363
EaeI	YGGCCR	1 cut(s)	890
Eam1104I	CTCTTC	2 cut(s)	148, 643
EarI	CTCTTC	2 cut(s)	148, 643
EciI	GGCGGA	1 cut(s)	80
Ecl136II	GAGCTC	1 cut(s)	490
Eco130I	CCWWGG	1 cut(s)	320
Eco147I	AGGCCT	1 cut(s)	553
Eco24I	GRGCYC	1 cut(s)	492
Eco31I	GGTCTC	2 cut(s)	145, 988
Eco47I	GGWCC	1 cut(s)	1040
Eco53kI	GAGCTC	1 cut(s)	490
Eco72I	CACGTG	1 cut(s)	468
Eco88I	CYCGRG	1 cut(s)	485
EcoICRI	GAGCTC	1 cut(s)	490
EcoRI	GAATTC	1 cut(s)	806
EcoRII	CCWGG	1 cut(s)	548
EcoT14I	CCWWGG	1 cut(s)	320
EcoT38I	GRGCYC	1 cut(s)	492
EgeI	GGCGCC	2 cut(s)	84, 363
EheI	GGCGCC	2 cut(s)	84, 363
ErhI	CCWWGG	1 cut(s)	320
FaeI	CATG	3 cut(s)	505, 523, 1012
FaqI	GGGAC	1 cut(s)	56
FatI	CATG	3 cut(s)	501, 519, 1008
FauI	CCCGC	1 cut(s)	370
FblI	GTMKAC	1 cut(s)	33
Fnu4HI	GCNGC	6 cut(s)	63, 130, 228, 240, 365, 836
FokI	GGATG	3 cut(s)	294, 698, 1040
FriOI	GRGCYC	1 cut(s)	492
Fsp4HI	GCNGC	6 cut(s)	63, 130, 228, 240, 365, 836
FspBI	CTAG	3 cut(s)	321, 447, 923
GlaI	GCGC	3 cut(s)	84, 363, 921
GluI	GCNGC	6 cut(s)	63, 130, 228, 240, 365, 836
HaeII	RGCGCY	2 cut(s)	86, 365
HaeIII	GGCC	2 cut(s)	553, 892
HapII	CCGG	3 cut(s)	98, 147, 368
HgaI	GACGC	4 cut(s)	103, 219, 291, 974
HhaI	GCGC	3 cut(s)	85, 364, 922
Hin1I	GRCGYC	3 cut(s)	83, 95, 362
Hin1II	CATG	3 cut(s)	505, 523, 1012
Hin6I	GCGC	3 cut(s)	83, 362, 920
HinP1I	GCGC	3 cut(s)	83, 362, 920
HincII	GTYRAC	1 cut(s)	34
HindII	GTYRAC	1 cut(s)	34
HinfI	GANTC	5 cut(s)	103, 209, 297, 651, 929
HpaII	CCGG	3 cut(s)	98, 147, 368
HphI	GGTGA	5 cut(s)	164, 538, 592, 749, 1033
Hpy166II	GTNNAC	1 cut(s)	34
Hpy188III	TCNNGA	4 cut(s)	147, 158, 485, 746
Hpy8I	GTNNAC	1 cut(s)	34
Hpy99I	CGWCG	4 cut(s)	307, 316, 402, 497
HpyAV	CCTTC	3 cut(s)	122, 346, 659
HpyCH4IV	ACGT	4 cut(s)	273, 314, 467, 857
HpyCH4V	TGCA	5 cut(s)	22, 259, 612, 718, 1012
HpyF10VI	GCNNNNNNNGC	3 cut(s)	236, 290, 299
HpySE526I	ACGT	4 cut(s)	273, 314, 467, 857
Hsp92I	GRCGYC	3 cut(s)	83, 95, 362
Hsp92II	CATG	3 cut(s)	505, 523, 1012
HspAI	GCGC	3 cut(s)	83, 362, 920
KasI	GGCGCC	2 cut(s)	82, 361
Kpn2I	TCCGGA	1 cut(s)	146
LmnI	GCTCC	4 cut(s)	149, 160, 281, 476
Lsp1109I	GCAGC	3 cut(s)	141, 239, 822
LweI	GCATC	1 cut(s)	316
MaeI	CTAG	3 cut(s)	321, 447, 923
MaeII	ACGT	4 cut(s)	273, 314, 467, 857
MaeIII	GTNAC	1 cut(s)	858
MboII	GAAGA	8 cut(s)	86, 135, 609, 630, 752, 829, 832, 835
MflI	RGATCY	2 cut(s)	541, 748
MhlI	GDGCHC	3 cut(s)	165, 279, 492
MlsI	TGGCCA	1 cut(s)	892
MluCI	AATT	3 cut(s)	442, 806, 954
MluNI	TGGCCA	1 cut(s)	892
Mly113I	GGCGCC	2 cut(s)	83, 362
MlyI	GAGTC	1 cut(s)	203
MmeI	TCCRAC	3 cut(s)	335, 421, 923
Mox20I	TGGCCA	1 cut(s)	892
MroI	TCCGGA	1 cut(s)	146
MscI	TGGCCA	1 cut(s)	892
MseI	TTAA	2 cut(s)	578, 957
MslI	CAYNNNNRTG	1 cut(s)	524
Msp20I	TGGCCA	1 cut(s)	892
MspA1I	CMGCKG	1 cut(s)	118
MspI	CCGG	3 cut(s)	98, 147, 368
MspR9I	CCNGG	1 cut(s)	550
MvaI	CCWGG	1 cut(s)	550
MvnI	CGCG	3 cut(s)	264, 302, 377
MwoI	GCNNNNNNNGC	3 cut(s)	236, 290, 299
NarI	GGCGCC	2 cut(s)	83, 362
NheI	GCTAGC	1 cut(s)	922
NlaIII	CATG	3 cut(s)	505, 523, 1012
NlaIV	GGNNCC	5 cut(s)	84, 151, 283, 363, 793
NmeAIII	GCCGAG	1 cut(s)	203
NspI	RCATGY	2 cut(s)	523, 1012
PceI	AGGCCT	1 cut(s)	553
PciI	ACATGT	1 cut(s)	519
PcsI	WCGNNNNNNNCGW	5 cut(s)	204, 261, 311, 339, 766
PfeI	GAWTC	4 cut(s)	103, 297, 651, 929
PflFI	GACNNNGTC	1 cut(s)	212
PkrI	GCNGC	6 cut(s)	64, 131, 229, 241, 366, 837
PleI	GAGTC	1 cut(s)	203
PluTI	GGCGCC	2 cut(s)	86, 365
PmaCI	CACGTG	1 cut(s)	468
PmlI	CACGTG	1 cut(s)	468
PpsI	GAGTC	1 cut(s)	203
Ppu21I	YACGTR	1 cut(s)	468
PscI	ACATGT	1 cut(s)	519
PsiI	TTATAA	2 cut(s)	885, 971
Psp124BI	GAGCTC	1 cut(s)	492
Psp1406I	AACGTT	1 cut(s)	857
Psp6I	CCWGG	1 cut(s)	548
PspCI	CACGTG	1 cut(s)	468
PspGI	CCWGG	1 cut(s)	548
PspN4I	GGNNCC	5 cut(s)	84, 151, 283, 363, 793
PspPI	GGNCC	1 cut(s)	1040
PsrI	GAACNNNNNNTAC	2 cut(s)	433, 465
PsuI	RGATCY	2 cut(s)	541, 748
PsyI	GACNNNGTC	1 cut(s)	212
RsaI	GTAC	5 cut(s)	71, 221, 317, 416, 533
RsaNI	GTAC	5 cut(s)	70, 220, 316, 415, 532
RseI	CAYNNNNRTG	1 cut(s)	524
SacI	GAGCTC	1 cut(s)	492
SalI	GTCGAC	1 cut(s)	32
SaqAI	TTAA	2 cut(s)	578, 957
SatI	GCNGC	6 cut(s)	63, 130, 228, 240, 365, 836
Sau96I	GGNCC	1 cut(s)	1040
SchI	GAGTC	1 cut(s)	203
ScrFI	CCNGG	1 cut(s)	550
SduI	GDGCHC	3 cut(s)	165, 279, 492
SfaNI	GCATC	1 cut(s)	316
SfoI	GGCGCC	2 cut(s)	84, 363
SinI	GGWCC	1 cut(s)	1040
SmiMI	CAYNNNNRTG	1 cut(s)	524
SmlI	CTYRAG	1 cut(s)	752
SmoI	CTYRAG	1 cut(s)	752
Sse9I	AATT	3 cut(s)	442, 806, 954
SseBI	AGGCCT	1 cut(s)	553
SsiI	CCGC	9 cut(s)	62, 65, 116, 127, 240, 365, 377, 926, 1019
SspDI	GGCGCC	2 cut(s)	82, 361
SspMI	CTAG	3 cut(s)	321, 447, 923
SstI	GAGCTC	1 cut(s)	492
StuI	AGGCCT	1 cut(s)	553
StyD4I	CCNGG	1 cut(s)	548
StyI	CCWWGG	1 cut(s)	320
TaiI	ACGT	4 cut(s)	276, 317, 470, 860
TaqI	TCGA	8 cut(s)	33, 245, 342, 452, 492, 588, 745, 804
TasI	AATT	3 cut(s)	442, 806, 954
TatI	WGTACW	3 cut(s)	219, 414, 531
TauI	GCSGC	3 cut(s)	65, 242, 367
TfiI	GAWTC	4 cut(s)	103, 297, 651, 929
Tru1I	TTAA	2 cut(s)	578, 957
Tru9I	TTAA	2 cut(s)	578, 957
TscAI	CASTG	1 cut(s)	703
TseI	GCWGC	3 cut(s)	129, 227, 835
TspDTI	ATGAA	5 cut(s)	490, 576, 609, 678, 869
TspGWI	ACGGA	3 cut(s)	202, 634, 917
TspRI	CASTG	1 cut(s)	703
Tth111I	GACNNNGTC	1 cut(s)	212
VpaK11BI	GGWCC	1 cut(s)	1040
XapI	RAATTY	1 cut(s)	806
XceI	RCATGY	2 cut(s)	523, 1012
XmaJI	CCTAGG	1 cut(s)	320
XmiI	GTMKAC	1 cut(s)	33
XspI	CTAG	3 cut(s)	321, 447, 923

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.