pycom17g00620

Omega-hydroxypalmitate O-feruloyl

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
437468 .. 439115
1648 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1335 bp
ATGGTTGCTGAATTCGGAGAGTCTGTCGCGATGGACAACACCACCAATGGTGACGCGTTCCAGCTGAGAGTGAAGCAAGGAGAGCCAACTCTGGTTTCCCCTGCAGTTGAAACAGAGAAGGGTTTGTACTTCCTCTCGAATCTCGATCAAAACATTGCGGTGACTGTTCGCACTATTTACTGCTTCAAGTCGGATGATAAGGGAAATGACCAGGCAGGGGAAGTGATCAAGGATGCCTTGAAGAAGGTTCTTGTCCACTATTACCCTCTTGCCGGGCGGTTAGCAATTAGCGCGGAGGGAAAGCTCATTGTGGATTGCACGGGGGAAGGAGCTGTTTTCGTTGAGGCTGAAGCAGATTGTGCGATAGAAGAGATTGGTGACATAACAAAGCCGGACCCCGAGACTCTTGGGAGGCTGGTTTATGATGTTCCTGGTGCGAAAAACATACTGGAGATGCCTCCACTGGTGGTTCAGGTGACTAAATTCAAATGTGGAGGATTTTCTCTTGGCCTGTGCATGAATCATTGTATGTTTGATGGCATCGGTGCAATGGAATTCGTGAACTCGTGGGGTAAAATTGCCAGAGGTTTGCCATTGACAGTTCCTCCGTTTTTAGACAGAAGCATACTCAAAGCGCGAAACCCACCAAGTATAGAGTACCCGCATCAGGAATTCTCAGAGATCACCGGCACTTCTTGCATCAACAATGACCTTTGTGAGGAAAAAATGCAGTACAGATCCTTCAGTTTCGACAGTGAGAAGCTTGAGAAACTCAAAATGAAGGCCAGGGAAGACGGGGCGCTTGAAAATTGCACTACTTTCGAAGCCCTCTCTGCATTCGTGTGGAAAGCTCGGACCAGAGCGCTAAATCTGCCGCCTGAGCAACAAATAAAGCTCCTGTTTGCTGTTGACGGGAGGCCTAAATTCAGGCCGCCGCTGCCAAAAGGGTACTTTGGCAATGGCATTGTGCTGACAAATTCCGTCTGCCAGGCAGGTGACTTACTGGACAAGCCGCTGTCAAATGCAGTCGGACTAGTTCAAGATGCAATCAAGATGGTCACTGACAGTTACATGAGATCTGCCATAGATTTTTTCGAGCTGACGCGAGCTAGGCCTTCGCTGGCCTCCACACTCTTGATCACGACTTGGTCTAAGCTGTCGTTCTACACGACTGATTTTGGTTGGGGAGAGCCTGTGCTATCAGGTCCGGTGGCATTGCCGGAGAAGGAAGTGATCTTGTTCCTTTCTAATGGGACAGAAAAGAAGAACATAAACGTGCTTTTGGGGCTTCCAGCTTCTGCCATGAATATCTTCCAAGAACTGATGAACGTCTAG

Protein Analysis

445

Amino Acids

48.81

Weight (kDa)

5.07

Isoelectric Point (pI)

38.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 28 - 442 7.6e-96 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 983
Acc36I ACCTGC 1 cut(s) 983
AccII CGCG 5 cut(s) 29, 56, 293, 637, 1105
AciI CCGC 8 cut(s) 158, 277, 293, 662, 875, 932, 935, 1013
AclWI GGATC 1 cut(s) 732
AcsI RAATTY 6 cut(s) 11, 482, 554, 671, 923, 976
AcuI CTGAAG 2 cut(s) 369, 727
AfaI GTAC 4 cut(s) 128, 659, 734, 950
AfeI AGCGCT 1 cut(s) 864
AfiI CCNNNNNNNGG 4 cut(s) 217, 272, 667, 718
AflIII ACRYGT 1 cut(s) 54
AgsI TTSAA 6 cut(s) 110, 187, 241, 487, 806, 1040
AhlI ACTAGT 1 cut(s) 1033
AjnI CCWGG 4 cut(s) 210, 430, 785, 987
AjuI GAANNNNNNNTTGG 2 cut(s) 79, 111
Alw26I GTCTC 1 cut(s) 395
AlwI GGATC 1 cut(s) 732
AlwNI CAGNNNCTG 1 cut(s) 1298
Ama87I CYCGRG 1 cut(s) 398
Aor51HI AGCGCT 1 cut(s) 864
AoxI GGCC 6 cut(s) 508, 783, 917, 929, 1112, 1122
ApeKI GCWGC 1 cut(s) 937
ApoI RAATTY 6 cut(s) 11, 482, 554, 671, 923, 976
Asp700I GAANNNNTTC 1 cut(s) 1310
AspLEI GCGC 4 cut(s) 293, 637, 802, 865
AspS9I GGNCC 3 cut(s) 394, 855, 1205
AsuC2I CCSGG 1 cut(s) 274
AsuHPI GGTGA 6 cut(s) 62, 172, 389, 487, 676, 1007
AsuII TTCGAA 1 cut(s) 822
AvaI CYCGRG 1 cut(s) 398
AvaII GGWCC 3 cut(s) 394, 855, 1205
BarI GAAGNNNNNNTAC 4 cut(s) 110, 142, 725, 757
BauI CACGAG 1 cut(s) 565
BbsI GAAGAC 1 cut(s) 798
BbvI GCAGC 1 cut(s) 924
BccI CCATC 3 cut(s) 25, 530, 1048
BcgI CGANNNNNNTGC 2 cut(s) 802, 836
BciT130I CCWGG 4 cut(s) 212, 432, 787, 989
BclI TGATCA 2 cut(s) 225, 1137
BcnI CCSGG 1 cut(s) 274
BcoDI GTCTC 1 cut(s) 395
BcuI ACTAGT 1 cut(s) 1033
BfaI CTAG 3 cut(s) 1034, 1110, 1333
BfmI CTRYAG 1 cut(s) 102
BfoI RGCGCY 2 cut(s) 803, 866
BfuAI ACCTGC 1 cut(s) 983
BglII AGATCT 1 cut(s) 1076
BisI GCNGC 5 cut(s) 875, 932, 935, 938, 1013
BlsI GCNGC 5 cut(s) 876, 933, 936, 939, 1014
Bme1390I CCNGG 5 cut(s) 212, 274, 432, 787, 989
Bme18I GGWCC 3 cut(s) 394, 855, 1205
BmeT110I CYCGRG 1 cut(s) 398
BmgT120I GGNCC 3 cut(s) 394, 855, 1205
BmiI GGNNCC 1 cut(s) 396
BmrFI CCNGG 5 cut(s) 212, 274, 432, 787, 989
BmsI GCATC 6 cut(s) 223, 444, 549, 673, 708, 1033
BpiI GAAGAC 1 cut(s) 798
BpmI CTGGAG 1 cut(s) 470
Bpu10I CCTNAGC 1 cut(s) 879
Bpu14I TTCGAA 1 cut(s) 822
BpuEI CTTGAG 1 cut(s) 785
BpuMI CCSGG 1 cut(s) 274
BsaJI CCNNGG 1 cut(s) 786
BsaWI WCCGGW 1 cut(s) 1207
BsaXI ACNNNNNCTCC 6 cut(s) 9, 39, 589, 619, 1179, 1209
Bsc4I CCNNNNNNNGG 4 cut(s) 217, 272, 667, 718
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 3 cut(s) 453, 468, 1008
Bse3DI GCAATG 4 cut(s) 153, 555, 964, 1214
BseBI CCWGG 4 cut(s) 212, 432, 787, 989
BseDI CCNNGG 1 cut(s) 786
BseGI GGATG 2 cut(s) 199, 238
BseLI CCNNNNNNNGG 4 cut(s) 217, 272, 667, 718
BseMI GCAATG 4 cut(s) 153, 555, 964, 1214
BseMII CTCAG 3 cut(s) 56, 690, 870
BseNI ACTGG 3 cut(s) 453, 468, 1008
BseXI GCAGC 1 cut(s) 924
Bsh1236I CGCG 5 cut(s) 29, 56, 293, 637, 1105
BshFI GGCC 6 cut(s) 510, 785, 919, 931, 1114, 1124
BsiHKCI CYCGRG 1 cut(s) 398
BsiSI CCGG 5 cut(s) 273, 392, 687, 1208, 1220
BslFI GGGAC 1 cut(s) 1267
BslI CCNNNNNNNGG 4 cut(s) 217, 272, 667, 718
BsmAI GTCTC 1 cut(s) 395
BsmFI GGGAC 1 cut(s) 1267
BsmI GAATGC 1 cut(s) 836
BsnI GGCC 6 cut(s) 510, 785, 919, 931, 1114, 1124
BsoBI CYCGRG 1 cut(s) 398
Bsp119I TTCGAA 1 cut(s) 822
Bsp143I GATC 7 cut(s) 145, 225, 681, 737, 1076, 1137, 1233
Bsp68I TCGCGA 1 cut(s) 29
BspACI CCGC 8 cut(s) 158, 277, 293, 662, 875, 932, 935, 1013
BspANI GGCC 6 cut(s) 510, 785, 919, 931, 1114, 1124
BspCNI CTCAG 3 cut(s) 57, 689, 871
BspFNI CGCG 5 cut(s) 29, 56, 293, 637, 1105
BspLI GGNNCC 1 cut(s) 396
BspMAI CTGCAG 1 cut(s) 106
BspMI ACCTGC 1 cut(s) 983
BspPI GGATC 1 cut(s) 732
BspT104I TTCGAA 1 cut(s) 822
BsrDI GCAATG 4 cut(s) 153, 555, 964, 1214
BsrFI RCCGGY 1 cut(s) 686
BsrI ACTGG 3 cut(s) 453, 468, 1008
BssAI RCCGGY 1 cut(s) 686
BssECI CCNNGG 1 cut(s) 786
BssMI GATC 7 cut(s) 145, 225, 681, 737, 1076, 1137, 1233
BssSI CACGAG 1 cut(s) 565
Bst2BI CACGAG 1 cut(s) 565
Bst2UI CCWGG 4 cut(s) 212, 432, 787, 989
Bst4CI ACNGT 4 cut(s) 166, 601, 755, 1067
Bst6I CTCTTC 1 cut(s) 363
BstAPI GCANNNNNTGC 2 cut(s) 359, 696
BstBI TTCGAA 1 cut(s) 822
BstC8I GCNNGC 2 cut(s) 1107, 1122
BstDEI CTNAG 4 cut(s) 65, 676, 879, 1152
BstENI CCTNNNNNAGG 1 cut(s) 716
BstF5I GGATG 2 cut(s) 199, 238
BstFNI CGCG 5 cut(s) 29, 56, 293, 637, 1105
BstH2I RGCGCY 2 cut(s) 803, 866
BstHHI GCGC 4 cut(s) 293, 637, 802, 865
BstKTI GATC 7 cut(s) 148, 228, 684, 740, 1079, 1140, 1236
BstMAI GTCTC 1 cut(s) 395
BstMBI GATC 7 cut(s) 145, 225, 681, 737, 1076, 1137, 1233
BstNI CCWGG 4 cut(s) 212, 432, 787, 989
BstSCI CCNGG 5 cut(s) 210, 272, 430, 785, 987
BstSFI CTRYAG 1 cut(s) 102
BstUI CGCG 5 cut(s) 29, 56, 293, 637, 1105
BstV1I GCAGC 1 cut(s) 924
BstV2I GAAGAC 1 cut(s) 798
BstX2I RGATCY 2 cut(s) 737, 1076
BstYI RGATCY 2 cut(s) 737, 1076
BsuRI GGCC 6 cut(s) 510, 785, 919, 931, 1114, 1124
BtgZI GCGATG 1 cut(s) 44
BtsCI GGATG 2 cut(s) 199, 238
BtsIMutI CAGTG 3 cut(s) 461, 760, 1059
BtuMI TCGCGA 1 cut(s) 29
BveI ACCTGC 1 cut(s) 983
Cac8I GCNNGC 2 cut(s) 1107, 1122
CaiI CAGNNNCTG 1 cut(s) 1298
CfoI GCGC 4 cut(s) 293, 637, 802, 865
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 3 cut(s) 394, 855, 1205
CseI GACGC 2 cut(s) 62, 1111
Csp6I GTAC 4 cut(s) 127, 658, 733, 949
CviAII CATG 3 cut(s) 517, 1072, 1303
CviQI GTAC 4 cut(s) 127, 658, 733, 949
DdeI CTNAG 4 cut(s) 65, 676, 879, 1152
DpnI GATC 7 cut(s) 147, 227, 683, 739, 1078, 1139, 1235
DpnII GATC 7 cut(s) 145, 225, 681, 737, 1076, 1137, 1233
Eam1104I CTCTTC 1 cut(s) 363
EarI CTCTTC 1 cut(s) 363
Eco147I AGGCCT 2 cut(s) 919, 1114
Eco47I GGWCC 3 cut(s) 394, 855, 1205
Eco47III AGCGCT 1 cut(s) 864
Eco57I CTGAAG 2 cut(s) 369, 727
Eco88I CYCGRG 1 cut(s) 398
EcoNI CCTNNNNNAGG 1 cut(s) 716
EcoRI GAATTC 3 cut(s) 11, 554, 671
EcoRII CCWGG 4 cut(s) 210, 430, 785, 987
FaeI CATG 3 cut(s) 520, 1075, 1306
FalI AAGNNNNNCTT 2 cut(s) 221, 253
FaqI GGGAC 1 cut(s) 1267
FatI CATG 3 cut(s) 516, 1071, 1302
FauI CCCGC 1 cut(s) 669
FbaI TGATCA 2 cut(s) 225, 1137
Fnu4HI GCNGC 5 cut(s) 875, 932, 935, 938, 1013
FokI GGATG 2 cut(s) 206, 245
Fsp4HI GCNGC 5 cut(s) 875, 932, 935, 938, 1013
FspBI CTAG 3 cut(s) 1034, 1110, 1333
GlaI GCGC 4 cut(s) 292, 636, 801, 864
GluI GCNGC 5 cut(s) 875, 932, 935, 938, 1013
GsuI CTGGAG 1 cut(s) 470
HaeII RGCGCY 2 cut(s) 803, 866
HaeIII GGCC 6 cut(s) 510, 785, 919, 931, 1114, 1124
HapII CCGG 5 cut(s) 273, 392, 687, 1208, 1220
HgaI GACGC 2 cut(s) 62, 1111
HhaI GCGC 4 cut(s) 293, 637, 802, 865
Hin1II CATG 3 cut(s) 520, 1075, 1306
Hin6I GCGC 4 cut(s) 291, 635, 800, 863
HinP1I GCGC 4 cut(s) 291, 635, 800, 863
HincII GTYRAC 1 cut(s) 910
HindII GTYRAC 1 cut(s) 910
HindIII AAGCTT 1 cut(s) 761
HinfI GANTC 4 cut(s) 20, 139, 403, 520
HpaII CCGG 5 cut(s) 273, 392, 687, 1208, 1220
HphI GGTGA 6 cut(s) 62, 172, 389, 487, 676, 1007
Hpy166II GTNNAC 3 cut(s) 256, 562, 910
Hpy188I TCNGA 5 cut(s) 17, 193, 679, 855, 1031
Hpy188III TCNNGA 9 cut(s) 28, 136, 143, 559, 668, 1040, 1051, 1135, 1141
Hpy8I GTNNAC 3 cut(s) 256, 562, 910
HpyAV CCTTC 7 cut(s) 112, 238, 320, 751, 775, 1125, 1219
HpyCH4III ACNGT 4 cut(s) 166, 601, 755, 1067
HpyCH4IV ACGT 2 cut(s) 1275, 1329
HpyF3I CTNAG 4 cut(s) 65, 676, 879, 1152
HpySE526I ACGT 2 cut(s) 1275, 1329
Hsp92II CATG 3 cut(s) 520, 1075, 1306
HspAI GCGC 4 cut(s) 291, 635, 800, 863
Ksp22I TGATCA 2 cut(s) 225, 1137
Kzo9I GATC 7 cut(s) 145, 225, 681, 737, 1076, 1137, 1233
LmnI GCTCC 2 cut(s) 329, 900
Lsp1109I GCAGC 1 cut(s) 924
LweI GCATC 6 cut(s) 223, 444, 549, 673, 708, 1033
MaeI CTAG 3 cut(s) 1034, 1110, 1333
MaeII ACGT 2 cut(s) 1275, 1329
MaeIII GTNAC 7 cut(s) 50, 160, 377, 475, 995, 1057, 1067
MalI GATC 7 cut(s) 147, 227, 683, 739, 1078, 1139, 1235
MboI GATC 7 cut(s) 145, 225, 681, 737, 1076, 1137, 1233
MboII GAAGA 5 cut(s) 253, 380, 803, 1276, 1303
MflI RGATCY 2 cut(s) 737, 1076
MluCI AATT 9 cut(s) 11, 285, 482, 554, 576, 671, 808, 923, 976
MluI ACGCGT 1 cut(s) 54
MlyI GAGTC 2 cut(s) 29, 397
MmeI TCCRAC 2 cut(s) 171, 1009
MroXI GAANNNNTTC 1 cut(s) 1310
MslI CAYNNNNRTG 3 cut(s) 158, 841, 1274
MspA1I CMGCKG 3 cut(s) 64, 937, 1015
MspI CCGG 5 cut(s) 273, 392, 687, 1208, 1220
MspR9I CCNGG 5 cut(s) 212, 274, 432, 787, 989
Mva1269I GAATGC 1 cut(s) 836
MvaI CCWGG 4 cut(s) 212, 432, 787, 989
MvnI CGCG 5 cut(s) 29, 56, 293, 637, 1105
NciI CCSGG 1 cut(s) 274
NdeII GATC 7 cut(s) 145, 225, 681, 737, 1076, 1137, 1233
NlaIII CATG 3 cut(s) 520, 1075, 1306
NlaIV GGNNCC 1 cut(s) 396
NmuCI GTSAC 6 cut(s) 50, 160, 377, 475, 995, 1057
NruI TCGCGA 1 cut(s) 29
NspV TTCGAA 1 cut(s) 822
PaqCI CACCTGC 1 cut(s) 983
PceI AGGCCT 2 cut(s) 919, 1114
PcsI WCGNNNNNNNCGW 1 cut(s) 1166
PctI GAATGC 1 cut(s) 836
PdmI GAANNNNTTC 1 cut(s) 1310
PfeI GAWTC 2 cut(s) 139, 520
PflFI GACNNNGTC 1 cut(s) 1147
PkrI GCNGC 5 cut(s) 876, 933, 936, 939, 1014
PleI GAGTC 2 cut(s) 28, 397
PpsI GAGTC 2 cut(s) 28, 397
Psp6I CCWGG 4 cut(s) 210, 430, 785, 987
PspGI CCWGG 4 cut(s) 210, 430, 785, 987
PspN4I GGNNCC 1 cut(s) 396
PspPI GGNCC 3 cut(s) 394, 855, 1205
PstI CTGCAG 1 cut(s) 106
PstNI CAGNNNCTG 1 cut(s) 1298
PsuI RGATCY 2 cut(s) 737, 1076
PsyI GACNNNGTC 1 cut(s) 1147
PvuII CAGCTG 1 cut(s) 64
RruI TCGCGA 1 cut(s) 29
RsaI GTAC 4 cut(s) 128, 659, 734, 950
RsaNI GTAC 4 cut(s) 127, 658, 733, 949
RseI CAYNNNNRTG 3 cut(s) 158, 841, 1274
SatI GCNGC 5 cut(s) 875, 932, 935, 938, 1013
Sau3AI GATC 7 cut(s) 145, 225, 681, 737, 1076, 1137, 1233
Sau96I GGNCC 3 cut(s) 394, 855, 1205
SchI GAGTC 2 cut(s) 29, 397
ScrFI CCNGG 5 cut(s) 212, 274, 432, 787, 989
SfaNI GCATC 6 cut(s) 223, 444, 549, 673, 708, 1033
SfcI CTRYAG 1 cut(s) 102
SfuI TTCGAA 1 cut(s) 822
SinI GGWCC 3 cut(s) 394, 855, 1205
SmiMI CAYNNNNRTG 3 cut(s) 158, 841, 1274
SmlI CTYRAG 1 cut(s) 764
SmoI CTYRAG 1 cut(s) 764
SpeI ACTAGT 1 cut(s) 1033
Sse9I AATT 9 cut(s) 11, 285, 482, 554, 576, 671, 808, 923, 976
SseBI AGGCCT 2 cut(s) 919, 1114
SsiI CCGC 8 cut(s) 158, 277, 293, 662, 875, 932, 935, 1013
SspMI CTAG 3 cut(s) 1034, 1110, 1333
StuI AGGCCT 2 cut(s) 919, 1114
StyD4I CCNGG 5 cut(s) 210, 272, 430, 785, 987
TaaI ACNGT 4 cut(s) 166, 601, 755, 1067
TaiI ACGT 2 cut(s) 1278, 1332
TaqI TCGA 5 cut(s) 137, 144, 750, 822, 1095
TasI AATT 9 cut(s) 11, 285, 482, 554, 576, 671, 808, 923, 976
TatI WGTACW 2 cut(s) 126, 732
TauI GCSGC 4 cut(s) 877, 934, 937, 1015
TfiI GAWTC 2 cut(s) 139, 520
TscAI CASTG 3 cut(s) 468, 760, 1066
TseFI GTSAC 6 cut(s) 50, 160, 377, 475, 995, 1057
TseI GCWGC 1 cut(s) 937
Tsp45I GTSAC 6 cut(s) 50, 160, 377, 475, 995, 1057
TspDTI ATGAA 3 cut(s) 533, 794, 1319
TspGWI ACGGA 2 cut(s) 597, 970
TspRI CASTG 3 cut(s) 468, 760, 1066
Tth111I GACNNNGTC 1 cut(s) 1147
VpaK11BI GGWCC 3 cut(s) 394, 855, 1205
XagI CCTNNNNNAGG 1 cut(s) 716
XapI RAATTY 6 cut(s) 11, 482, 554, 671, 923, 976
XmnI GAANNNNTTC 1 cut(s) 1310
XspI CTAG 3 cut(s) 1034, 1110, 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.