pycom17g07690

Cell division cycle

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0003334
Physical Location & Seq
Forward (+)
5597272 .. 5598291
1020 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g07690.1

Sequence Viewer

Length: 1020 bp
ATGAAGGAAGAAGAAGTGAATAGATGCCAGATACAGGAATGGTACCCGAAGTTTAAATCTGTGTCTATCAAAACCCGAATTCATGAGCTTCCTGAATCCTTTGTCCAGTATCTTCTCGATGATTCGGGCCCCTTCCTTCTCCCTGTTTCAATCTCAAATGACGATGCGTTTCCTAATAGAATTCATAATCCGGAGGAGGAAGACGACTATCAAGTATCAGAAGGGTCTGGTGATGAGTCGGAGCAGCCTTCTCTGCCGCCCTCTTTCCCTGAGCTTGAGTTGGAGATCAAGGAATCGATTGAGTCCCTTGGAGGGTCTGTGTTCCCTAAGCTGAACTGGAGTGCACCAAAAGACTCGGCTTGGATCAGCACTACTGGGAGTCTCAGATGCTCTTCGTTCAGTGAGATTGCGCTCTTGCTACGATCGTCTGACTCATTGGTCCATCGGAAGATCGATCTGTGTCACGCATATGATTCCTGCAGTGACAAAACCTCATCAAGGCCTAGGAGTTTCTTCCTTGCACTGCGGAAATGGTACCAATCTCTGAAGCCAGAGATGGAGTTCCGTTGCTTTGTACGAAATCAGAACTTAGTTGGAATTTCCCAACGTGAGGTCACTACTTGTTATCCTGCTCTGATTGAAAAGAAAGACAGCCTTCAAGCGTTGATCGAAGACTTTTTCGTGGATAAATTGATGTCGAGATTTGAATCAGAAAACTACACCTTTGATGTCTGTATGACAAAGGATGATCGCGTTAAGGTTGTGGATTTCAACCCATGGGGCGCATTTACGCTACCTCTGATGTTTACATGGGAGGAATTGGATCAGACTCATAGTGAACAAGGAGATGGTGTCATCTTCAGAGTCGTAGAGAGCCAGTTATCTGTTAGGCCAGGTTTGAAGACAGCAGTGCCGTTTGATTATTTGGACACTGGCGCCGGGAGTGGCTGGGATCAAGTTATCAGAAATGCTAATGAAGAGTTGCAGCAACAAACTAGGAATGCTCAAGCAGGTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
D123

Protein Analysis

340

Amino Acids

38.71

Weight (kDa)

4.71

Isoelectric Point (pI)

57.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
D123 PF07065 14 - 310 1.9e-92 D123
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1001
AasI GACNNNNNNGTC 1 cut(s) 437
Acc36I ACCTGC 1 cut(s) 1001
Acc65I GGTACC 2 cut(s) 42, 534
AccB1I GGYRCC 3 cut(s) 42, 534, 935
AccII CGCG 1 cut(s) 753
AccIII TCCGGA 1 cut(s) 190
AciI CCGC 2 cut(s) 257, 526
AclWI GGATC 3 cut(s) 371, 831, 960
AcsI RAATTY 3 cut(s) 78, 180, 597
AcuI CTGAAG 2 cut(s) 566, 844
AcyI GRCGYC 1 cut(s) 936
AfaI GTAC 3 cut(s) 44, 536, 576
AfiI CCNNNNNNNGG 4 cut(s) 34, 312, 498, 610
AgsI TTSAA 6 cut(s) 150, 641, 659, 707, 772, 901
AjnI CCWGG 1 cut(s) 892
AluBI AGCT 3 cut(s) 88, 274, 331
AluI AGCT 3 cut(s) 88, 274, 331
Alw21I GWGCWC 1 cut(s) 346
Alw26I GTCTC 1 cut(s) 386
Alw44I GTGCAC 1 cut(s) 342
AlwI GGATC 3 cut(s) 371, 831, 960
Aor13HI TCCGGA 1 cut(s) 190
AoxI GGCC 3 cut(s) 127, 500, 890
ApaI GGGCCC 1 cut(s) 131
ApaLI GTGCAC 1 cut(s) 342
ApeKI GCWGC 2 cut(s) 244, 985
ApoI RAATTY 3 cut(s) 78, 180, 597
Asp718I GGTACC 2 cut(s) 42, 534
AspA2I CCTAGG 1 cut(s) 503
AspLEI GCGC 3 cut(s) 412, 785, 938
AspS9I GGNCC 3 cut(s) 127, 128, 439
AsuC2I CCSGG 1 cut(s) 940
AsuHPI GGTGA 1 cut(s) 242
AvaII GGWCC 1 cut(s) 439
AvrII CCTAGG 1 cut(s) 503
BaeGI GKGCMC 2 cut(s) 131, 346
BanI GGYRCC 3 cut(s) 42, 534, 935
BanII GRGCYC 1 cut(s) 131
BbsI GAAGAC 3 cut(s) 207, 678, 908
Bbv12I GWGCWC 1 cut(s) 346
BbvI GCAGC 2 cut(s) 256, 997
BccI CCATC 3 cut(s) 450, 550, 842
BceAI ACGGC 1 cut(s) 898
BciT130I CCWGG 1 cut(s) 894
BcnI CCSGG 1 cut(s) 940
BcoDI GTCTC 1 cut(s) 386
BfaI CTAG 2 cut(s) 504, 996
BfmI CTRYAG 1 cut(s) 478
BfoI RGCGCY 1 cut(s) 939
BfuAI ACCTGC 1 cut(s) 1001
BisI GCNGC 3 cut(s) 245, 257, 986
BlnI CCTAGG 1 cut(s) 503
BlsI GCNGC 3 cut(s) 246, 258, 987
Bme1390I CCNGG 2 cut(s) 894, 940
Bme18I GGWCC 1 cut(s) 439
BmgT120I GGNCC 3 cut(s) 127, 128, 439
BmiI GGNNCC 5 cut(s) 44, 129, 130, 536, 937
BmrFI CCNGG 2 cut(s) 894, 940
BmrI ACTGGG 1 cut(s) 384
BmsI GCATC 3 cut(s) 14, 154, 377
BmuI ACTGGG 1 cut(s) 384
BpiI GAAGAC 3 cut(s) 207, 678, 908
BpmI CTGGAG 1 cut(s) 358
Bpu10I CCTNAGC 2 cut(s) 270, 327
BpuEI CTTGAG 2 cut(s) 296, 990
BpuMI CCSGG 1 cut(s) 940
Bsa29I ATCGAT 2 cut(s) 296, 453
BsaBI GATNNNNATC 1 cut(s) 706
BsaHI GRCGYC 1 cut(s) 936
BsaJI CCNNGG 3 cut(s) 307, 503, 776
BsaWI WCCGGW 1 cut(s) 190
BsaXI ACNNNNNCTCC 4 cut(s) 303, 333, 837, 867
Bsc4I CCNNNNNNNGG 4 cut(s) 34, 312, 498, 610
Bse1I ACTGG 5 cut(s) 106, 341, 379, 877, 937
Bse8I GATNNNNATC 1 cut(s) 706
BseAI TCCGGA 1 cut(s) 190
BseBI CCWGG 1 cut(s) 894
BseCI ATCGAT 2 cut(s) 296, 453
BseDI CCNNGG 3 cut(s) 307, 503, 776
BseGI GGATG 1 cut(s) 751
BseJI GATNNNNATC 1 cut(s) 706
BseLI CCNNNNNNNGG 4 cut(s) 34, 312, 498, 610
BseMII CTCAG 2 cut(s) 261, 397
BseNI ACTGG 5 cut(s) 106, 341, 379, 877, 937
BseRI GAGGAG 1 cut(s) 209
BseSI GKGCMC 2 cut(s) 131, 346
BseXI GCAGC 2 cut(s) 256, 997
BseYI CCCAGC 1 cut(s) 948
Bsh1236I CGCG 1 cut(s) 753
Bsh1285I CGRYCG 1 cut(s) 425
BshFI GGCC 3 cut(s) 129, 502, 892
BshNI GGYRCC 3 cut(s) 42, 534, 935
BshVI ATCGAT 2 cut(s) 296, 453
BsiEI CGRYCG 1 cut(s) 425
BsiHKAI GWGCWC 1 cut(s) 346
BsiSI CCGG 2 cut(s) 191, 939
BslFI GGGAC 1 cut(s) 289
BslI CCNNNNNNNGG 4 cut(s) 34, 312, 498, 610
BsmAI GTCTC 1 cut(s) 386
BsmFI GGGAC 1 cut(s) 289
BsmI GAATGC 1 cut(s) 1006
BsnI GGCC 3 cut(s) 129, 502, 892
Bsp120I GGGCCC 1 cut(s) 127
Bsp1286I GDGCHC 2 cut(s) 131, 346
Bsp13I TCCGGA 1 cut(s) 190
Bsp143I GATC 9 cut(s) 285, 363, 422, 450, 454, 666, 748, 823, 952
Bsp19I CCATGG 1 cut(s) 776
BspACI CCGC 2 cut(s) 257, 526
BspANI GGCC 3 cut(s) 129, 502, 892
BspCNI CTCAG 2 cut(s) 262, 396
BspDI ATCGAT 2 cut(s) 296, 453
BspEI TCCGGA 1 cut(s) 190
BspFNI CGCG 1 cut(s) 753
BspHI TCATGA 1 cut(s) 82
BspLI GGNNCC 5 cut(s) 44, 129, 130, 536, 937
BspMAI CTGCAG 1 cut(s) 482
BspMI ACCTGC 1 cut(s) 1001
BspPI GGATC 3 cut(s) 371, 831, 960
BspQI GCTCTTC 1 cut(s) 397
BspT107I GGYRCC 3 cut(s) 42, 534, 935
BsrI ACTGG 5 cut(s) 106, 341, 379, 877, 937
BssECI CCNNGG 3 cut(s) 307, 503, 776
BssMI GATC 9 cut(s) 285, 363, 422, 450, 454, 666, 748, 823, 952
BssNI GRCGYC 1 cut(s) 936
BssT1I CCWWGG 3 cut(s) 307, 503, 776
Bst2UI CCWGG 1 cut(s) 894
Bst6I CTCTTC 2 cut(s) 397, 972
BstACI GRCGYC 1 cut(s) 936
BstDEI CTNAG 4 cut(s) 270, 327, 383, 589
BstDSI CCRYGG 1 cut(s) 776
BstENI CCTNNNNNAGG 1 cut(s) 496
BstF5I GGATG 1 cut(s) 751
BstFNI CGCG 1 cut(s) 753
BstH2I RGCGCY 1 cut(s) 939
BstHHI GCGC 3 cut(s) 412, 785, 938
BstKTI GATC 9 cut(s) 288, 366, 425, 453, 457, 669, 751, 826, 955
BstMAI GTCTC 1 cut(s) 386
BstMBI GATC 9 cut(s) 285, 363, 422, 450, 454, 666, 748, 823, 952
BstMCI CGRYCG 1 cut(s) 425
BstMWI GCNNNNNNNGC 1 cut(s) 253
BstNI CCWGG 1 cut(s) 894
BstSCI CCNGG 2 cut(s) 892, 938
BstSFI CTRYAG 1 cut(s) 478
BstSLI GKGCMC 2 cut(s) 131, 346
BstUI CGCG 1 cut(s) 753
BstV1I GCAGC 2 cut(s) 256, 997
BstV2I GAAGAC 3 cut(s) 207, 678, 908
Bsu15I ATCGAT 2 cut(s) 296, 453
BsuRI GGCC 3 cut(s) 129, 502, 892
BsuTUI ATCGAT 2 cut(s) 296, 453
BtgI CCRYGG 1 cut(s) 776
BtsCI GGATG 1 cut(s) 751
BtsI GCAGTG 3 cut(s) 487, 521, 915
BtsIMutI CAGTG 5 cut(s) 406, 487, 521, 915, 930
BveI ACCTGC 1 cut(s) 1001
CciI TCATGA 1 cut(s) 82
CfoI GCGC 3 cut(s) 412, 785, 938
Cfr13I GGNCC 3 cut(s) 127, 128, 439
ClaI ATCGAT 2 cut(s) 296, 453
Csp6I GTAC 3 cut(s) 43, 535, 575
CviAII CATG 3 cut(s) 83, 777, 810
CviQI GTAC 3 cut(s) 43, 535, 575
DdeI CTNAG 4 cut(s) 270, 327, 383, 589
DinI GGCGCC 1 cut(s) 937
DpnI GATC 9 cut(s) 287, 365, 424, 452, 456, 668, 750, 825, 954
DpnII GATC 9 cut(s) 285, 363, 422, 450, 454, 666, 748, 823, 952
DraI TTTAAA 1 cut(s) 55
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
Eam1104I CTCTTC 2 cut(s) 397, 972
EarI CTCTTC 2 cut(s) 397, 972
Eco130I CCWWGG 3 cut(s) 307, 503, 776
Eco147I AGGCCT 1 cut(s) 502
Eco24I GRGCYC 1 cut(s) 131
Eco47I GGWCC 1 cut(s) 439
Eco57I CTGAAG 2 cut(s) 566, 844
EcoNI CCTNNNNNAGG 1 cut(s) 496
EcoO109I RGGNCCY 1 cut(s) 128
EcoRI GAATTC 2 cut(s) 78, 180
EcoRII CCWGG 1 cut(s) 892
EcoT14I CCWWGG 3 cut(s) 307, 503, 776
EcoT38I GRGCYC 1 cut(s) 131
EgeI GGCGCC 1 cut(s) 937
EheI GGCGCC 1 cut(s) 937
ErhI CCWWGG 3 cut(s) 307, 503, 776
FaeI CATG 3 cut(s) 86, 780, 813
FaiI YATR 8 cut(s) 84, 186, 469, 471, 737, 778, 811, 834
FalI AAGNNNNNCTT 2 cut(s) 639, 671
FaqI GGGAC 1 cut(s) 289
FatI CATG 3 cut(s) 82, 776, 809
FauNDI CATATG 1 cut(s) 469
Fnu4HI GCNGC 3 cut(s) 245, 257, 986
FokI GGATG 1 cut(s) 758
FriOI GRGCYC 1 cut(s) 131
Fsp4HI GCNGC 3 cut(s) 245, 257, 986
FspBI CTAG 2 cut(s) 504, 996
GlaI GCGC 3 cut(s) 411, 784, 937
GluI GCNGC 3 cut(s) 245, 257, 986
GsaI CCCAGC 1 cut(s) 952
GsuI CTGGAG 1 cut(s) 358
HaeII RGCGCY 1 cut(s) 939
HaeIII GGCC 3 cut(s) 129, 502, 892
HapII CCGG 2 cut(s) 191, 939
HhaI GCGC 3 cut(s) 412, 785, 938
Hin1I GRCGYC 1 cut(s) 936
Hin1II CATG 3 cut(s) 86, 780, 813
Hin6I GCGC 3 cut(s) 410, 783, 936
HinP1I GCGC 3 cut(s) 410, 783, 936
HpaII CCGG 2 cut(s) 191, 939
HphI GGTGA 1 cut(s) 242
Hpy166II GTNNAC 3 cut(s) 344, 807, 839
Hpy188III TCNNGA 5 cut(s) 83, 92, 116, 191, 699
Hpy8I GTNNAC 3 cut(s) 344, 807, 839
HpyAV CCTTC 5 cut(s) 142, 146, 215, 258, 665
HpyCH4IV ACGT 1 cut(s) 607
HpyCH4V TGCA 4 cut(s) 344, 480, 521, 985
HpyF10VI GCNNNNNNNGC 1 cut(s) 253
HpyF3I CTNAG 4 cut(s) 270, 327, 383, 589
HpySE526I ACGT 1 cut(s) 607
Hsp92I GRCGYC 1 cut(s) 936
Hsp92II CATG 3 cut(s) 86, 780, 813
HspAI GCGC 3 cut(s) 410, 783, 936
KasI GGCGCC 1 cut(s) 935
Kpn2I TCCGGA 1 cut(s) 190
KpnI GGTACC 2 cut(s) 46, 538
Kzo9I GATC 9 cut(s) 285, 363, 422, 450, 454, 666, 748, 823, 952
LguI GCTCTTC 1 cut(s) 397
LmnI GCTCC 1 cut(s) 241
Lsp1109I GCAGC 2 cut(s) 256, 997
LweI GCATC 3 cut(s) 14, 154, 377
MaeI CTAG 2 cut(s) 504, 996
MaeII ACGT 1 cut(s) 607
MaeIII GTNAC 3 cut(s) 461, 482, 613
MalI GATC 9 cut(s) 287, 365, 424, 452, 456, 668, 750, 825, 954
MboI GATC 9 cut(s) 285, 363, 422, 450, 454, 666, 748, 823, 952
MhlI GDGCHC 2 cut(s) 131, 346
MluCI AATT 5 cut(s) 78, 180, 597, 689, 818
Mly113I GGCGCC 1 cut(s) 936
MlyI GAGTC 7 cut(s) 245, 311, 347, 388, 425, 823, 873
MmeI TCCRAC 3 cut(s) 219, 261, 574
MnlI CCTC 8 cut(s) 187, 190, 271, 305, 502, 604, 807, 808
MroI TCCGGA 1 cut(s) 190
MseI TTAA 3 cut(s) 54, 756, 1018
MslI CAYNNNNRTG 1 cut(s) 468
MspI CCGG 2 cut(s) 191, 939
MspR9I CCNGG 2 cut(s) 894, 940
Mva1269I GAATGC 1 cut(s) 1006
MvaI CCWGG 1 cut(s) 894
MvnI CGCG 1 cut(s) 753
MwoI GCNNNNNNNGC 1 cut(s) 253
NarI GGCGCC 1 cut(s) 936
NciI CCSGG 1 cut(s) 940
NcoI CCATGG 1 cut(s) 776
NdeI CATATG 1 cut(s) 469
NdeII GATC 9 cut(s) 285, 363, 422, 450, 454, 666, 748, 823, 952
NlaIII CATG 3 cut(s) 86, 780, 813
NlaIV GGNNCC 5 cut(s) 44, 129, 130, 536, 937
NmeAIII GCCGAG 1 cut(s) 335
NmuCI GTSAC 3 cut(s) 461, 482, 613
PagI TCATGA 1 cut(s) 82
PaqCI CACCTGC 1 cut(s) 1001
PceI AGGCCT 1 cut(s) 502
PciSI GCTCTTC 1 cut(s) 397
PctI GAATGC 1 cut(s) 1006
PfeI GAWTC 5 cut(s) 95, 122, 293, 473, 707
PkrI GCNGC 3 cut(s) 246, 258, 987
Ple19I CGATCG 1 cut(s) 425
PleI GAGTC 7 cut(s) 244, 310, 347, 387, 425, 823, 872
PluTI GGCGCC 1 cut(s) 939
PpsI GAGTC 7 cut(s) 244, 310, 347, 387, 425, 823, 872
Psp6I CCWGG 1 cut(s) 892
PspFI CCCAGC 1 cut(s) 948
PspGI CCWGG 1 cut(s) 892
PspN4I GGNNCC 5 cut(s) 44, 129, 130, 536, 937
PspOMI GGGCCC 1 cut(s) 127
PspPI GGNCC 3 cut(s) 127, 128, 439
PstI CTGCAG 1 cut(s) 482
PvuI CGATCG 1 cut(s) 425
RsaI GTAC 3 cut(s) 44, 536, 576
RsaNI GTAC 3 cut(s) 43, 535, 575
RseI CAYNNNNRTG 1 cut(s) 468
SapI GCTCTTC 1 cut(s) 397
SaqAI TTAA 3 cut(s) 54, 756, 1018
SatI GCNGC 3 cut(s) 245, 257, 986
Sau3AI GATC 9 cut(s) 285, 363, 422, 450, 454, 666, 748, 823, 952
Sau96I GGNCC 3 cut(s) 127, 128, 439
SchI GAGTC 7 cut(s) 245, 311, 347, 388, 425, 823, 873
ScrFI CCNGG 2 cut(s) 894, 940
SduI GDGCHC 2 cut(s) 131, 346
SfaNI GCATC 3 cut(s) 14, 154, 377
SfcI CTRYAG 1 cut(s) 478
SfoI GGCGCC 1 cut(s) 937
SinI GGWCC 1 cut(s) 439
SmiMI CAYNNNNRTG 1 cut(s) 468
SmlI CTYRAG 2 cut(s) 275, 1005
SmoI CTYRAG 2 cut(s) 275, 1005
Sse9I AATT 5 cut(s) 78, 180, 597, 689, 818
SseBI AGGCCT 1 cut(s) 502
SsiI CCGC 2 cut(s) 257, 526
SspDI GGCGCC 1 cut(s) 935
SspMI CTAG 2 cut(s) 504, 996
StuI AGGCCT 1 cut(s) 502
StyD4I CCNGG 2 cut(s) 892, 938
StyI CCWWGG 3 cut(s) 307, 503, 776
TaiI ACGT 1 cut(s) 610
TaqI TCGA 5 cut(s) 117, 296, 453, 669, 698
TasI AATT 5 cut(s) 78, 180, 597, 689, 818
TauI GCSGC 1 cut(s) 259
TfiI GAWTC 5 cut(s) 95, 122, 293, 473, 707
Tru1I TTAA 3 cut(s) 54, 756, 1018
Tru9I TTAA 3 cut(s) 54, 756, 1018
TscAI CASTG 5 cut(s) 406, 487, 528, 915, 937
TseFI GTSAC 3 cut(s) 461, 482, 613
TseI GCWGC 2 cut(s) 244, 985
Tsp45I GTSAC 3 cut(s) 461, 482, 613
TspDTI ATGAA 4 cut(s) 17, 71, 173, 990
TspGWI ACGGA 1 cut(s) 554
TspRI CASTG 5 cut(s) 406, 487, 528, 915, 937
VneI GTGCAC 1 cut(s) 342
VpaK11BI GGWCC 1 cut(s) 439
XagI CCTNNNNNAGG 1 cut(s) 496
XapI RAATTY 3 cut(s) 78, 180, 597
XmaJI CCTAGG 1 cut(s) 503
XspI CTAG 2 cut(s) 504, 996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.