Heterogeneous nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07810 AT3G07810 |
| fragaria_vesca | FvH4_6g41280 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 FvH4_6g41320 |
| malus_domestica | MD09G1120600.v1.1 MD09G1121100.v1.1 MD17G1111500.v1.1 MD17G1112100.v1.1 |
| prunus_persica | Prupe.3G202600_v2.0.a1 Prupe.3G202600_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 Prupe.3G202900_v2.0.a1 |
| pyrus_communis | pycom09g04550 pycom17g10350 pycom17g10380 |
| rosa_chinensis | RchiOBHm_Chr2g0156821 RchiOBHm_Chr2g0156871 |
| rosa_laevigata | RLG00000020945 RLG00000020948 |
| rosa_multiflora | Rmu_co8440963.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092640 Rroxscaffold_2G00092680 |
| rosa_rugosa | Rorug02G0456400 Rorug02G0456500 Rorug02G0456800 Rorug02G0456800 Rorug02G0456800 Rorug02G0456900 Rorug02G0456900 Rorug02G0456900 |
| rosa_samantha | Rh2AG522100 Rh2AG522400 Rh2BG535500 Rh2BG535700 Rh2CG507000 Rh2CG507300 Rh2DG544500 Rh2DG544700 |
| rosa_wichuraiana | Rw2G043110 Rw2G043140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 687 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 587 |
| AccI | GTMKAC | 1 cut(s) | 536 |
| AciI | CCGC | 4 cut(s) | 68, 199, 804, 1253 |
| AcsI | RAATTY | 3 cut(s) | 210, 889, 1209 |
| AcuI | CTGAAG | 1 cut(s) | 954 |
| AfaI | GTAC | 2 cut(s) | 263, 937 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 194, 476, 548, 587, 614, 986 |
| AflII | CTTAAG | 1 cut(s) | 383 |
| AgsI | TTSAA | 3 cut(s) | 256, 727, 771 |
| AjnI | CCWGG | 4 cut(s) | 187, 193, 451, 649 |
| AluBI | AGCT | 5 cut(s) | 510, 837, 956, 1261, 1276 |
| AluI | AGCT | 5 cut(s) | 510, 837, 956, 1261, 1276 |
| Alw21I | GWGCWC | 1 cut(s) | 28 |
| Alw26I | GTCTC | 2 cut(s) | 836, 1179 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 587, 1264 |
| AoxI | GGCC | 5 cut(s) | 19, 117, 196, 454, 1098 |
| ApeKI | GCWGC | 4 cut(s) | 171, 465, 1118, 1258 |
| ApoI | RAATTY | 3 cut(s) | 210, 889, 1209 |
| AspA2I | CCTAGG | 1 cut(s) | 661 |
| AspLEI | GCGC | 1 cut(s) | 1258 |
| AspS9I | GGNCC | 6 cut(s) | 12, 191, 455, 921, 1099, 1146 |
| AsuHPI | GGTGA | 2 cut(s) | 302, 310 |
| AvaII | GGWCC | 4 cut(s) | 12, 191, 921, 1146 |
| AvrII | CCTAGG | 1 cut(s) | 661 |
| BauI | CACGAG | 1 cut(s) | 27 |
| Bbv12I | GWGCWC | 1 cut(s) | 28 |
| BbvI | GCAGC | 4 cut(s) | 183, 477, 1105, 1270 |
| BccI | CCATC | 7 cut(s) | 95, 103, 406, 794, 857, 1136, 1216 |
| BceAI | ACGGC | 1 cut(s) | 6 |
| BciT130I | CCWGG | 4 cut(s) | 189, 195, 453, 651 |
| BciVI | GTATCC | 1 cut(s) | 473 |
| BclI | TGATCA | 1 cut(s) | 307 |
| BcoDI | GTCTC | 2 cut(s) | 836, 1179 |
| BfaI | CTAG | 1 cut(s) | 662 |
| BfrI | CTTAAG | 1 cut(s) | 383 |
| BfuI | GTATCC | 1 cut(s) | 473 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 125 |
| BisI | GCNGC | 6 cut(s) | 172, 199, 466, 1119, 1254, 1259 |
| BlnI | CCTAGG | 1 cut(s) | 661 |
| BlsI | GCNGC | 6 cut(s) | 173, 200, 467, 1120, 1255, 1260 |
| BmcAI | AGTACT | 1 cut(s) | 263 |
| Bme1390I | CCNGG | 4 cut(s) | 189, 195, 453, 651 |
| Bme18I | GGWCC | 4 cut(s) | 12, 191, 921, 1146 |
| BmgT120I | GGNCC | 6 cut(s) | 12, 191, 455, 921, 1099, 1146 |
| BmiI | GGNNCC | 5 cut(s) | 457, 922, 1022, 1101, 1147 |
| BmrFI | CCNGG | 4 cut(s) | 189, 195, 453, 651 |
| BmrI | ACTGGG | 1 cut(s) | 453 |
| BmsI | GCATC | 3 cut(s) | 183, 239, 1130 |
| BmuI | ACTGGG | 1 cut(s) | 453 |
| BpmI | CTGGAG | 3 cut(s) | 171, 972, 1086 |
| BpuEI | CTTGAG | 1 cut(s) | 969 |
| Bsa29I | ATCGAT | 1 cut(s) | 1200 |
| BsaI | GGTCTC | 1 cut(s) | 1179 |
| BsaJI | CCNNGG | 6 cut(s) | 134, 178, 650, 661, 1024, 1149 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 194, 476, 548, 587, 614, 986 |
| Bse118I | RCCGGY | 1 cut(s) | 979 |
| Bse1I | ACTGG | 4 cut(s) | 459, 581, 955, 1069 |
| Bse3DI | GCAATG | 1 cut(s) | 981 |
| BseBI | CCWGG | 4 cut(s) | 189, 195, 453, 651 |
| BseCI | ATCGAT | 1 cut(s) | 1200 |
| BseDI | CCNNGG | 6 cut(s) | 134, 178, 650, 661, 1024, 1149 |
| BseGI | GGATG | 5 cut(s) | 114, 145, 174, 230, 868 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 194, 476, 548, 587, 614, 986 |
| BseMI | GCAATG | 1 cut(s) | 981 |
| BseMII | CTCAG | 4 cut(s) | 485, 542, 852, 1205 |
| BseNI | ACTGG | 4 cut(s) | 459, 581, 955, 1069 |
| BseXI | GCAGC | 4 cut(s) | 183, 477, 1105, 1270 |
| BseYI | CCCAGC | 1 cut(s) | 58 |
| BsgI | GTGCAG | 1 cut(s) | 450 |
| BshFI | GGCC | 5 cut(s) | 21, 119, 198, 456, 1100 |
| BshVI | ATCGAT | 1 cut(s) | 1200 |
| BsiHKAI | GWGCWC | 1 cut(s) | 28 |
| BsiSI | CCGG | 1 cut(s) | 980 |
| BslFI | GGGAC | 3 cut(s) | 292, 934, 1075 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 194, 476, 548, 587, 614, 986 |
| BsmAI | GTCTC | 2 cut(s) | 836, 1179 |
| BsmFI | GGGAC | 3 cut(s) | 292, 934, 1075 |
| BsmI | GAATGC | 1 cut(s) | 682 |
| BsnI | GGCC | 5 cut(s) | 21, 119, 198, 456, 1100 |
| Bso31I | GGTCTC | 1 cut(s) | 1179 |
| Bsp1286I | GDGCHC | 1 cut(s) | 28 |
| Bsp143I | GATC | 5 cut(s) | 7, 307, 908, 1197, 1201 |
| Bsp19I | CCATGG | 1 cut(s) | 178 |
| BspACI | CCGC | 4 cut(s) | 68, 199, 804, 1253 |
| BspANI | GGCC | 5 cut(s) | 21, 119, 198, 456, 1100 |
| BspCNI | CTCAG | 4 cut(s) | 486, 541, 851, 1206 |
| BspDI | ATCGAT | 1 cut(s) | 1200 |
| BspHI | TCATGA | 1 cut(s) | 394 |
| BspLI | GGNNCC | 5 cut(s) | 457, 922, 1022, 1101, 1147 |
| BspTI | CTTAAG | 1 cut(s) | 383 |
| BspTNI | GGTCTC | 1 cut(s) | 1179 |
| BsrDI | GCAATG | 1 cut(s) | 981 |
| BsrFI | RCCGGY | 1 cut(s) | 979 |
| BsrI | ACTGG | 4 cut(s) | 459, 581, 955, 1069 |
| BssAI | RCCGGY | 1 cut(s) | 979 |
| BssECI | CCNNGG | 6 cut(s) | 134, 178, 650, 661, 1024, 1149 |
| BssMI | GATC | 5 cut(s) | 7, 307, 908, 1197, 1201 |
| BssNAI | GTATAC | 1 cut(s) | 537 |
| BssSI | CACGAG | 1 cut(s) | 27 |
| BssT1I | CCWWGG | 5 cut(s) | 134, 178, 661, 1024, 1149 |
| Bst1107I | GTATAC | 1 cut(s) | 537 |
| Bst2BI | CACGAG | 1 cut(s) | 27 |
| Bst2UI | CCWGG | 4 cut(s) | 189, 195, 453, 651 |
| Bst4CI | ACNGT | 6 cut(s) | 238, 491, 1049, 1055, 1085, 1166 |
| Bst6I | CTCTTC | 1 cut(s) | 354 |
| BstAFI | CTTAAG | 1 cut(s) | 383 |
| BstC8I | GCNNGC | 2 cut(s) | 429, 981 |
| BstDEI | CTNAG | 4 cut(s) | 494, 528, 838, 1214 |
| BstDSI | CCRYGG | 1 cut(s) | 178 |
| BstF5I | GGATG | 5 cut(s) | 114, 145, 174, 230, 868 |
| BstHHI | GCGC | 1 cut(s) | 1258 |
| BstKTI | GATC | 5 cut(s) | 10, 310, 911, 1200, 1204 |
| BstMAI | GTCTC | 2 cut(s) | 836, 1179 |
| BstMBI | GATC | 5 cut(s) | 7, 307, 908, 1197, 1201 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 125, 171, 462, 962, 971, 980, 1097 |
| BstNI | CCWGG | 4 cut(s) | 189, 195, 453, 651 |
| BstSCI | CCNGG | 4 cut(s) | 187, 193, 451, 649 |
| BstV1I | GCAGC | 4 cut(s) | 183, 477, 1105, 1270 |
| BstZ17I | GTATAC | 1 cut(s) | 537 |
| Bsu15I | ATCGAT | 1 cut(s) | 1200 |
| BsuI | GTATCC | 1 cut(s) | 473 |
| BsuRI | GGCC | 5 cut(s) | 21, 119, 198, 456, 1100 |
| BsuTUI | ATCGAT | 1 cut(s) | 1200 |
| BtgI | CCRYGG | 1 cut(s) | 178 |
| BtsCI | GGATG | 5 cut(s) | 114, 145, 174, 230, 868 |
| BtsI | GCAGTG | 2 cut(s) | 172, 372 |
| BtsIMutI | CAGTG | 4 cut(s) | 172, 234, 372, 1090 |
| Cac8I | GCNNGC | 2 cut(s) | 429, 981 |
| CaiI | CAGNNNCTG | 2 cut(s) | 587, 1264 |
| CciI | TCATGA | 1 cut(s) | 394 |
| CfoI | GCGC | 1 cut(s) | 1258 |
| Cfr10I | RCCGGY | 1 cut(s) | 979 |
| Cfr13I | GGNCC | 6 cut(s) | 12, 191, 455, 921, 1099, 1146 |
| ClaI | ATCGAT | 1 cut(s) | 1200 |
| CseI | GACGC | 1 cut(s) | 64 |
| Csp6I | GTAC | 2 cut(s) | 262, 936 |
| CviAII | CATG | 2 cut(s) | 179, 395 |
| CviQI | GTAC | 2 cut(s) | 262, 936 |
| DdeI | CTNAG | 4 cut(s) | 494, 528, 838, 1214 |
| DpnI | GATC | 5 cut(s) | 9, 309, 910, 1199, 1203 |
| DpnII | GATC | 5 cut(s) | 7, 307, 908, 1197, 1201 |
| Eam1104I | CTCTTC | 1 cut(s) | 354 |
| EarI | CTCTTC | 1 cut(s) | 354 |
| Eco130I | CCWWGG | 5 cut(s) | 134, 178, 661, 1024, 1149 |
| Eco31I | GGTCTC | 1 cut(s) | 1179 |
| Eco47I | GGWCC | 4 cut(s) | 12, 191, 921, 1146 |
| Eco57I | CTGAAG | 1 cut(s) | 954 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1146 |
| EcoRII | CCWGG | 4 cut(s) | 187, 193, 451, 649 |
| EcoT14I | CCWWGG | 5 cut(s) | 134, 178, 661, 1024, 1149 |
| ErhI | CCWWGG | 5 cut(s) | 134, 178, 661, 1024, 1149 |
| FaeI | CATG | 2 cut(s) | 182, 398 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 248, 280 |
| FaqI | GGGAC | 3 cut(s) | 292, 934, 1075 |
| FatI | CATG | 2 cut(s) | 178, 394 |
| FauNDI | CATATG | 1 cut(s) | 349 |
| FbaI | TGATCA | 1 cut(s) | 307 |
| FblI | GTMKAC | 1 cut(s) | 536 |
| Fnu4HI | GCNGC | 6 cut(s) | 172, 199, 466, 1119, 1254, 1259 |
| FokI | GGATG | 5 cut(s) | 121, 152, 161, 217, 875 |
| Fsp4HI | GCNGC | 6 cut(s) | 172, 199, 466, 1119, 1254, 1259 |
| FspBI | CTAG | 1 cut(s) | 662 |
| GlaI | GCGC | 1 cut(s) | 1257 |
| GluI | GCNGC | 6 cut(s) | 172, 199, 466, 1119, 1254, 1259 |
| GsaI | CCCAGC | 1 cut(s) | 62 |
| GsuI | CTGGAG | 3 cut(s) | 171, 972, 1086 |
| HaeIII | GGCC | 5 cut(s) | 21, 119, 198, 456, 1100 |
| HapII | CCGG | 1 cut(s) | 980 |
| HgaI | GACGC | 1 cut(s) | 64 |
| HhaI | GCGC | 1 cut(s) | 1258 |
| Hin1II | CATG | 2 cut(s) | 182, 398 |
| Hin6I | GCGC | 1 cut(s) | 1256 |
| HinP1I | GCGC | 1 cut(s) | 1256 |
| HinfI | GANTC | 6 cut(s) | 339, 353, 573, 748, 844, 1004 |
| HpaII | CCGG | 1 cut(s) | 980 |
| HphI | GGTGA | 2 cut(s) | 302, 310 |
| Hpy166II | GTNNAC | 2 cut(s) | 370, 537 |
| Hpy188I | TCNGA | 8 cut(s) | 12, 55, 358, 495, 841, 908, 1215, 1266 |
| Hpy188III | TCNNGA | 3 cut(s) | 256, 395, 912 |
| Hpy8I | GTNNAC | 2 cut(s) | 370, 537 |
| HpyAV | CCTTC | 1 cut(s) | 99 |
| HpyCH4III | ACNGT | 6 cut(s) | 238, 491, 1049, 1055, 1085, 1166 |
| HpyCH4V | TGCA | 5 cut(s) | 431, 680, 1034, 1091, 1121 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 125, 171, 462, 962, 971, 980, 1097 |
| HpyF3I | CTNAG | 4 cut(s) | 494, 528, 838, 1214 |
| Hsp92II | CATG | 2 cut(s) | 182, 398 |
| HspAI | GCGC | 1 cut(s) | 1256 |
| KroI | GCCGGC | 1 cut(s) | 979 |
| KroNI | GCCGGC | 1 cut(s) | 981 |
| Ksp22I | TGATCA | 1 cut(s) | 307 |
| Kzo9I | GATC | 5 cut(s) | 7, 307, 908, 1197, 1201 |
| LmnI | GCTCC | 1 cut(s) | 953 |
| Lsp1109I | GCAGC | 4 cut(s) | 183, 477, 1105, 1270 |
| LweI | GCATC | 3 cut(s) | 183, 239, 1130 |
| MaeI | CTAG | 1 cut(s) | 662 |
| MaeIII | GTNAC | 3 cut(s) | 238, 248, 1049 |
| MalI | GATC | 5 cut(s) | 9, 309, 910, 1199, 1203 |
| MboI | GATC | 5 cut(s) | 7, 307, 908, 1197, 1201 |
| MboII | GAAGA | 7 cut(s) | 171, 371, 421, 816, 960, 1089, 1101 |
| MhlI | GDGCHC | 1 cut(s) | 28 |
| MluCI | AATT | 9 cut(s) | 210, 640, 682, 721, 766, 889, 958, 1171, 1209 |
| MlyI | GAGTC | 2 cut(s) | 757, 838 |
| MmeI | TCCRAC | 1 cut(s) | 199 |
| MroNI | GCCGGC | 1 cut(s) | 979 |
| MseI | TTAA | 3 cut(s) | 384, 516, 879 |
| MspCI | CTTAAG | 1 cut(s) | 383 |
| MspI | CCGG | 1 cut(s) | 980 |
| MspR9I | CCNGG | 4 cut(s) | 189, 195, 453, 651 |
| Mva1269I | GAATGC | 1 cut(s) | 682 |
| MvaI | CCWGG | 4 cut(s) | 189, 195, 453, 651 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 125, 171, 462, 962, 971, 980, 1097 |
| NaeI | GCCGGC | 1 cut(s) | 981 |
| NcoI | CCATGG | 1 cut(s) | 178 |
| NdeI | CATATG | 1 cut(s) | 349 |
| NdeII | GATC | 5 cut(s) | 7, 307, 908, 1197, 1201 |
| NgoMIV | GCCGGC | 1 cut(s) | 979 |
| NlaIII | CATG | 2 cut(s) | 182, 398 |
| NlaIV | GGNNCC | 5 cut(s) | 457, 922, 1022, 1101, 1147 |
| NmuCI | GTSAC | 2 cut(s) | 238, 248 |
| PagI | TCATGA | 1 cut(s) | 394 |
| PctI | GAATGC | 1 cut(s) | 682 |
| PdiI | GCCGGC | 1 cut(s) | 981 |
| PfeI | GAWTC | 4 cut(s) | 339, 353, 573, 1004 |
| PflFI | GACNNNGTC | 1 cut(s) | 74 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 587 |
| PkrI | GCNGC | 6 cut(s) | 173, 200, 467, 1120, 1255, 1260 |
| PleI | GAGTC | 2 cut(s) | 756, 838 |
| PpsI | GAGTC | 2 cut(s) | 756, 838 |
| PpuMI | RGGWCCY | 1 cut(s) | 1146 |
| PsiI | TTATAA | 1 cut(s) | 687 |
| Psp5II | RGGWCCY | 1 cut(s) | 1146 |
| Psp6I | CCWGG | 4 cut(s) | 187, 193, 451, 649 |
| PspFI | CCCAGC | 1 cut(s) | 58 |
| PspGI | CCWGG | 4 cut(s) | 187, 193, 451, 649 |
| PspN4I | GGNNCC | 5 cut(s) | 457, 922, 1022, 1101, 1147 |
| PspPI | GGNCC | 6 cut(s) | 12, 191, 455, 921, 1099, 1146 |
| PspPPI | RGGWCCY | 1 cut(s) | 1146 |
| PstNI | CAGNNNCTG | 2 cut(s) | 587, 1264 |
| PsyI | GACNNNGTC | 1 cut(s) | 74 |
| RsaI | GTAC | 2 cut(s) | 263, 937 |
| RsaNI | GTAC | 2 cut(s) | 262, 936 |
| SaqAI | TTAA | 3 cut(s) | 384, 516, 879 |
| SatI | GCNGC | 6 cut(s) | 172, 199, 466, 1119, 1254, 1259 |
| Sau3AI | GATC | 5 cut(s) | 7, 307, 908, 1197, 1201 |
| Sau96I | GGNCC | 6 cut(s) | 12, 191, 455, 921, 1099, 1146 |
| ScaI | AGTACT | 1 cut(s) | 263 |
| SchI | GAGTC | 2 cut(s) | 757, 838 |
| ScrFI | CCNGG | 4 cut(s) | 189, 195, 453, 651 |
| SduI | GDGCHC | 1 cut(s) | 28 |
| SfaNI | GCATC | 3 cut(s) | 183, 239, 1130 |
| SinI | GGWCC | 4 cut(s) | 12, 191, 921, 1146 |
| SmlI | CTYRAG | 2 cut(s) | 383, 984 |
| SmoI | CTYRAG | 2 cut(s) | 383, 984 |
| Sse9I | AATT | 9 cut(s) | 210, 640, 682, 721, 766, 889, 958, 1171, 1209 |
| SsiI | CCGC | 4 cut(s) | 68, 199, 804, 1253 |
| SspMI | CTAG | 1 cut(s) | 662 |
| StyD4I | CCNGG | 4 cut(s) | 187, 193, 451, 649 |
| StyI | CCWWGG | 5 cut(s) | 134, 178, 661, 1024, 1149 |
| TaaI | ACNGT | 6 cut(s) | 238, 491, 1049, 1055, 1085, 1166 |
| TaqI | TCGA | 3 cut(s) | 847, 1140, 1200 |
| TaqII | GACCGA | 1 cut(s) | 340 |
| TasI | AATT | 9 cut(s) | 210, 640, 682, 721, 766, 889, 958, 1171, 1209 |
| TatI | WGTACW | 2 cut(s) | 261, 935 |
| TauI | GCSGC | 2 cut(s) | 201, 1256 |
| TfiI | GAWTC | 4 cut(s) | 339, 353, 573, 1004 |
| Tru1I | TTAA | 3 cut(s) | 384, 516, 879 |
| Tru9I | TTAA | 3 cut(s) | 384, 516, 879 |
| TscAI | CASTG | 4 cut(s) | 172, 241, 372, 1090 |
| TseFI | GTSAC | 2 cut(s) | 238, 248 |
| TseI | GCWGC | 4 cut(s) | 171, 465, 1118, 1258 |
| Tsp45I | GTSAC | 2 cut(s) | 238, 248 |
| TspDTI | ATGAA | 6 cut(s) | 17, 331, 383, 411, 653, 816 |
| TspRI | CASTG | 4 cut(s) | 172, 241, 372, 1090 |
| Tth111I | GACNNNGTC | 1 cut(s) | 74 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 587 |
| Vha464I | CTTAAG | 1 cut(s) | 383 |
| VpaK11BI | GGWCC | 4 cut(s) | 12, 191, 921, 1146 |
| XapI | RAATTY | 3 cut(s) | 210, 889, 1209 |
| XmaJI | CCTAGG | 1 cut(s) | 661 |
| XmiI | GTMKAC | 1 cut(s) | 536 |
| XspI | CTAG | 1 cut(s) | 662 |
| ZrmI | AGTACT | 1 cut(s) | 263 |