Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0001667

Physical Location & Seq

Genomic Coordinates Reverse (-)

10360754 .. 10363469

Gene Structure 2716 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGTTTTCGATATCATACATGTTGAGCTATGTTGATTGGGGGGAAATATTTTACAGGCCAGACCATGAACTAGTCGAGCTCTTGTGGAGAGATGGGCAAGTAGTTTTGAACAGCCAAACGCATCGAAAACCAAGTCTGAATCCGAATGATCAACCGAGACAGGTTCAGAAACATGATCAGCAATCAATAAGGTCTGGTGGGTCGTATGGGAATTCAAGTAATCCGATTCTAGATGATGACACAGTTTCGCTTATCCACTACCCGCTTGAGAATTCTTTCGACAAAGAGTTTTGCTCCCATTTTTTCTCTGAATTGCATTCCTGTGGTCCAATTGAGCTTGACAAGCCAATCAAACAGTTTGAGGGAGAGAAGTTTGATGCTTCTGACACCGGGCGTCTTGTTTCCAATTCACCGCAGCCTAATGTTAAGTCCTCTGCTGGTGTGGAATACCCTGCAAATCCAATGCCTCCTCCAAGATACCACTACATTAATTCAACTGATCAGCAGAACCAAAATAGAGGCTTGGGGAAAATAGTTAATTTTTCGCAATTCGCAACCCCGGGAAAGCTTTCTGCAGGATCTTCCAGAGGACAGTTTGGAGGGAAAGAGGCCGGAAATTTAGCTCAAGCGGAGATTAGAGAGTGTTCTGTGATGACGGTTGGTTCGAGTTATGCTGGTAGCAACCAAGTTCTAAATGACCTTGATGTCAGCAGGGCTTCAAGCAATTGTGATGGAACCACTGGTTTATCGGCTGGACATTTCTACGACAATGTTCATAAGATAATGCCTCAGAGCGAGACGGGGAAAACAGATACGCTTGATCCAACGCTTACTTCGTCTTCTGGCGGTTCTGGAAGTAGTTTTGGCAGAGGAGGAAAGCAGTCTAATGTTGTCAACAGCAACAAGAGAAAGGTTAGAGATGCAGAGGACTCGGAGTGCCAAAGTGAGGCTGCTGAACTTGAGTCAGCTTCAGCTGCAGGAAGTAAGTCAGCGCATCGATCAGGATCGACCAGGAGGAGTCGTGCTGCTGAGGTCCACAACCTCTCAGAAAGGAGACGGAGAGATCGGATTAACGAGAAAATGAGAGCATTGCAAGAGCTTATACCTCAGTCTAACAAGACAGATAAAGCATCAATGTTAGATGAGGCAATTGAATACTTGAAGTCACTTCAGATGCAACTTCAGGTAATGTGGATGGGAAGCGGGATGGCACCAATGATGTATCCGGGCGTGCAGCACTATATTTCCCAAATGGGAATGGGATCGCCAGCCTTGCCTGCTATGCACAATCCGGTGCATTTGCCTAGGCACCCGCTCGTTGATCAGTGCATGAATGTGGCTCCAGCAGCAAACCAGACTGTAATGTGCCAACCACCGGTCTTGAATCCCGTTGATTACCACAACCAGATGCAAAATCCCTCTTTTCAGGAGCAATACGCGCGTCTCATGAACTTCCATCACATGCAGACTATGTCTCAGCCGATGAATATGTTCAGATTTGGCTCCCAAGCTGTACAACAGAATCAGATGATGGCACCAAATGGTCTCAGTAGACCTTTCGGTGTAGGAGCTGCAACTAATGACCCTTTAAGTGGAAAAATGAGTAAGTCACTTAGAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009642 GO:0009645 GO:0009692 GO:0009693 GO:0009704 GO:0009791 GO:0009889 GO:0009966 GO:0009987 GO:0010017 GO:0010114 GO:0010161 GO:0010244 GO:0010468 GO:0010556 GO:0010600 GO:0010646 GO:0010817 GO:0010928 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043449 GO:0043450 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0046885 GO:0048583 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071704 GO:0080090 GO:0090354 GO:0097159 GO:0104004 GO:0140110 GO:1900673 GO:1900674 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

HLH

Protein Analysis

541

Amino Acids

59.58

Weight (kDa)

6.81

Isoelectric Point (pI)

58.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	344 - 391	4.2e-14	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	350 - 396	1.2e-08	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT3G59060 AT3G59060 AT3G59060 AT3G59060
fragaria_vesca	FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940
malus_domestica	MD09G1146000.v1.1 MD17G1132600.v1.1
prunus_persica	Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1
pyrus_communis	pycom09g06630 pycom17g12610
rosa_chinensis	RchiOBHm_Chr2g0152511
rosa_laevigata	RLG00000020642
rosa_multiflora	Rmu_sc0005366.1_g000001 Rmu_sc0027733.1_g000001 Rmu_sc0027737.1_g000001 Rmu_sc0034754.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095640
rosa_rugosa	Rorug02G0434000 Rorug02G0434100 Rorug02G0434200
rosa_samantha	Rh2AG495400 Rh2BG507300 Rh2CG481500 Rh2CG481600 Rh2DG518600
rosa_wichuraiana	Rw2G040760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	704
AccB1I	GGYRCC	3 cut(s)	1210, 1308, 1534
AccBSI	CCGCTC	1 cut(s)	1315
AccI	GTMKAC	1 cut(s)	1552
AccII	CGCG	2 cut(s)	1439, 1441
AciI	CCGC	6 cut(s)	263, 413, 629, 846, 1203, 1313
AclWI	GGATC	4 cut(s)	586, 815, 1012, 1270
AcsI	RAATTY	3 cut(s)	211, 271, 616
AcuI	CTGAAG	3 cut(s)	954, 1154, 1166
AcyI	GRCGYC	1 cut(s)	394
AfaI	GTAC	1 cut(s)	1515
AfiI	CCNNNNNNNGG	3 cut(s)	946, 1375, 1592
AflIII	ACRYGT	1 cut(s)	18
AgeI	ACCGGT	1 cut(s)	1375
AgsI	TTSAA	7 cut(s)	109, 216, 495, 720, 1154, 1162, 1384
AhlI	ACTAGT	1 cut(s)	70
AjnI	CCWGG	1 cut(s)	1010
AjuI	GAANNNNNNNTTGG	2 cut(s)	817, 849
Alw21I	GWGCWC	1 cut(s)	81
Alw26I	GTCTC	6 cut(s)	151, 791, 1048, 1448, 1479, 1550
AlwI	GGATC	4 cut(s)	586, 815, 1012, 1270
Ama87I	CYCGRG	1 cut(s)	559
AoxI	GGCC	2 cut(s)	56, 609
ApeKI	GCWGC	7 cut(s)	415, 950, 974, 1025, 1234, 1346, 1571
ApoI	RAATTY	3 cut(s)	211, 271, 616
ArsI	GACNNNNNNTTYG	4 cut(s)	118, 150, 646, 678
AseI	ATTAAT	1 cut(s)	489
AsiGI	ACCGGT	1 cut(s)	1375
Asp700I	GAANNNNTTC	3 cut(s)	275, 568, 1490
AspA2I	CCTAGG	1 cut(s)	1304
AspLEI	GCGC	2 cut(s)	994, 1441
AspS9I	GGNCC	2 cut(s)	326, 1033
AsuC2I	CCSGG	4 cut(s)	391, 560, 561, 1227
AsuHPI	GGTGA	1 cut(s)	402
AvaI	CYCGRG	1 cut(s)	559
AvaII	GGWCC	2 cut(s)	326, 1033
AvrII	CCTAGG	1 cut(s)	1304
BanI	GGYRCC	3 cut(s)	1210, 1308, 1534
BanII	GRGCYC	1 cut(s)	81
BbsI	GAAGAC	1 cut(s)	831
Bbv12I	GWGCWC	1 cut(s)	81
BbvCI	CCTCAGC	1 cut(s)	1029
BbvI	GCAGC	7 cut(s)	427, 937, 961, 1012, 1246, 1358, 1558
BccI	CCATC	6 cut(s)	86, 725, 1189, 1201, 1464, 1525
BcgI	CGANNNNNNTGC	2 cut(s)	912, 946
BciT130I	CCWGG	1 cut(s)	1012
BciVI	GTATCC	1 cut(s)	1233
BclI	TGATCA	4 cut(s)	148, 175, 499, 1321
BcnI	CCSGG	4 cut(s)	391, 560, 561, 1227
BcoDI	GTCTC	6 cut(s)	151, 791, 1048, 1448, 1479, 1550
BcuI	ACTAGT	1 cut(s)	70
BfaI	CTAG	3 cut(s)	71, 230, 1305
BfmI	CTRYAG	2 cut(s)	573, 975
BfuI	GTATCC	1 cut(s)	1233
BisI	GCNGC	7 cut(s)	416, 951, 975, 1026, 1235, 1347, 1572
BlnI	CCTAGG	1 cut(s)	1304
BlsI	GCNGC	7 cut(s)	417, 952, 976, 1027, 1236, 1348, 1573
Bme1390I	CCNGG	5 cut(s)	391, 560, 561, 1012, 1227
Bme18I	GGWCC	2 cut(s)	326, 1033
BmeT110I	CYCGRG	1 cut(s)	559
BmgT120I	GGNCC	2 cut(s)	326, 1033
BmiI	GGNNCC	6 cut(s)	736, 1212, 1310, 1341, 1504, 1536
BmrFI	CCNGG	5 cut(s)	391, 560, 561, 1012, 1227
BmsI	GCATC	7 cut(s)	130, 367, 910, 1003, 1139, 1164, 1398
BpiI	GAAGAC	1 cut(s)	831
BplI	GAGNNNNNCTC	2 cut(s)	278, 310
BpmI	CTGGAG	1 cut(s)	1326
Bpu10I	CCTNAGC	1 cut(s)	1029
BpuEI	CTTGAG	3 cut(s)	287, 609, 980
BpuMI	CCSGG	4 cut(s)	391, 560, 561, 1227
Bsa29I	ATCGAT	1 cut(s)	997
BsaBI	GATNNNNATC	1 cut(s)	1003
BsaHI	GRCGYC	1 cut(s)	394
BsaI	GGTCTC	1 cut(s)	1550
BsaJI	CCNNGG	3 cut(s)	558, 559, 1304
BsaWI	WCCGGW	2 cut(s)	1291, 1375
BsaXI	ACNNNNNCTCC	2 cut(s)	1006, 1036
Bsc4I	CCNNNNNNNGG	3 cut(s)	946, 1375, 1592
Bse118I	RCCGGY	1 cut(s)	1375
Bse1I	ACTGG	1 cut(s)	745
Bse3DI	GCAATG	1 cut(s)	1088
Bse8I	GATNNNNATC	1 cut(s)	1003
BseBI	CCWGG	1 cut(s)	1012
BseCI	ATCGAT	1 cut(s)	997
BseDI	CCNNGG	3 cut(s)	558, 559, 1304
BseGI	GGATG	2 cut(s)	1200, 1212
BseJI	GATNNNNATC	1 cut(s)	1003
BseLI	CCNNNNNNNGG	3 cut(s)	946, 1375, 1592
BseMI	GCAATG	1 cut(s)	1088
BseMII	CTCAG	6 cut(s)	803, 1020, 1059, 1121, 1490, 1561
BseNI	ACTGG	1 cut(s)	745
BseRI	GAGGAG	3 cut(s)	459, 885, 1030
BseXI	GCAGC	7 cut(s)	427, 937, 961, 1012, 1246, 1358, 1558
BsgI	GTGCAG	1 cut(s)	1253
Bsh1236I	CGCG	2 cut(s)	1439, 1441
BshFI	GGCC	2 cut(s)	58, 611
BshNI	GGYRCC	3 cut(s)	1210, 1308, 1534
BshTI	ACCGGT	1 cut(s)	1375
BshVI	ATCGAT	1 cut(s)	997
BsiHKAI	GWGCWC	1 cut(s)	81
BsiHKCI	CYCGRG	1 cut(s)	559
BsiSI	CCGG	6 cut(s)	390, 560, 612, 1226, 1292, 1376
BslI	CCNNNNNNNGG	3 cut(s)	946, 1375, 1592
BsmAI	GTCTC	6 cut(s)	151, 791, 1048, 1448, 1479, 1550
BsmBI	CGTCTC	3 cut(s)	791, 1048, 1448
BsmI	GAATGC	1 cut(s)	316
BsnI	GGCC	2 cut(s)	58, 611
Bso31I	GGTCTC	1 cut(s)	1550
BsoBI	CYCGRG	1 cut(s)	559
Bsp1286I	GDGCHC	1 cut(s)	81
Bsp1407I	TGTACA	1 cut(s)	1513
BspACI	CCGC	6 cut(s)	263, 413, 629, 846, 1203, 1313
BspANI	GGCC	2 cut(s)	58, 611
BspCNI	CTCAG	6 cut(s)	802, 1021, 1058, 1120, 1489, 1560
BspDI	ATCGAT	1 cut(s)	997
BspFNI	CGCG	2 cut(s)	1439, 1441
BspHI	TCATGA	1 cut(s)	1446
BspLI	GGNNCC	6 cut(s)	736, 1212, 1310, 1341, 1504, 1536
BspMAI	CTGCAG	2 cut(s)	577, 979
BspPI	GGATC	4 cut(s)	586, 815, 1012, 1270
BspT107I	GGYRCC	3 cut(s)	1210, 1308, 1534
BspTNI	GGTCTC	1 cut(s)	1550
BsrBI	CCGCTC	1 cut(s)	1315
BsrDI	GCAATG	1 cut(s)	1088
BsrFI	RCCGGY	1 cut(s)	1375
BsrGI	TGTACA	1 cut(s)	1513
BsrI	ACTGG	1 cut(s)	745
BssAI	RCCGGY	1 cut(s)	1375
BssECI	CCNNGG	3 cut(s)	558, 559, 1304
BssNI	GRCGYC	1 cut(s)	394
BssT1I	CCWWGG	1 cut(s)	1304
Bst2UI	CCWGG	1 cut(s)	1012
Bst4CI	ACNGT	5 cut(s)	244, 357, 594, 658, 1360
BstACI	GRCGYC	1 cut(s)	394
BstAUI	TGTACA	1 cut(s)	1513
BstC8I	GCNNGC	3 cut(s)	1232, 1269, 1278
BstDEI	CTNAG	7 cut(s)	789, 1029, 1045, 1107, 1476, 1547, 1613
BstF5I	GGATG	2 cut(s)	1200, 1212
BstFNI	CGCG	2 cut(s)	1439, 1441
BstHHI	GCGC	2 cut(s)	994, 1441
BstMAI	GTCTC	6 cut(s)	151, 791, 1048, 1448, 1479, 1550
BstMWI	GCNNNNNNNGC	7 cut(s)	343, 974, 1273, 1277, 1282, 1346, 1438
BstNI	CCWGG	1 cut(s)	1012
BstNSI	RCATGY	2 cut(s)	22, 1465
BstSCI	CCNGG	5 cut(s)	389, 558, 559, 1010, 1225
BstSFI	CTRYAG	2 cut(s)	573, 975
BstUI	CGCG	2 cut(s)	1439, 1441
BstV1I	GCAGC	7 cut(s)	427, 937, 961, 1012, 1246, 1358, 1558
BstV2I	GAAGAC	1 cut(s)	831
BstX2I	RGATCY	1 cut(s)	578
BstYI	RGATCY	1 cut(s)	578
Bsu15I	ATCGAT	1 cut(s)	997
BsuI	GTATCC	1 cut(s)	1233
BsuRI	GGCC	2 cut(s)	58, 611
BsuTUI	ATCGAT	1 cut(s)	997
BtsCI	GGATG	2 cut(s)	1200, 1212
BtsIMutI	CAGTG	2 cut(s)	738, 1331
Cac8I	GCNNGC	3 cut(s)	1232, 1269, 1278
CciI	TCATGA	1 cut(s)	1446
CfoI	GCGC	2 cut(s)	994, 1441
Cfr10I	RCCGGY	1 cut(s)	1375
Cfr13I	GGNCC	2 cut(s)	326, 1033
Cfr9I	CCCGGG	1 cut(s)	559
ClaI	ATCGAT	1 cut(s)	997
CseI	GACGC	2 cut(s)	383, 1430
Csp6I	GTAC	1 cut(s)	1514
CspAI	ACCGGT	1 cut(s)	1375
CspCI	CAANNNNNGTGG	2 cut(s)	1362, 1397
CviAII	CATG	6 cut(s)	19, 65, 173, 1330, 1447, 1462
CviQI	GTAC	1 cut(s)	1514
DdeI	CTNAG	7 cut(s)	789, 1029, 1045, 1107, 1476, 1547, 1613
DrdI	GACNNNNNNGTC	1 cut(s)	704
DseDI	GACNNNNNNGTC	1 cut(s)	704
Ecl136II	GAGCTC	1 cut(s)	79
Eco130I	CCWWGG	1 cut(s)	1304
Eco24I	GRGCYC	1 cut(s)	81
Eco31I	GGTCTC	1 cut(s)	1550
Eco32I	GATATC	1 cut(s)	12
Eco47I	GGWCC	2 cut(s)	326, 1033
Eco53kI	GAGCTC	1 cut(s)	79
Eco57I	CTGAAG	3 cut(s)	954, 1154, 1166
Eco88I	CYCGRG	1 cut(s)	559
EcoICRI	GAGCTC	1 cut(s)	79
EcoRI	GAATTC	2 cut(s)	211, 271
EcoRII	CCWGG	1 cut(s)	1010
EcoRV	GATATC	1 cut(s)	12
EcoT14I	CCWWGG	1 cut(s)	1304
EcoT38I	GRGCYC	1 cut(s)	81
ErhI	CCWWGG	1 cut(s)	1304
Esp3I	CGTCTC	3 cut(s)	791, 1048, 1448
FaeI	CATG	6 cut(s)	22, 68, 176, 1333, 1450, 1465
FatI	CATG	6 cut(s)	18, 64, 172, 1329, 1446, 1461
FauI	CCCGC	3 cut(s)	270, 1196, 1320
FbaI	TGATCA	4 cut(s)	148, 175, 499, 1321
FblI	GTMKAC	1 cut(s)	1552
Fnu4HI	GCNGC	7 cut(s)	416, 951, 975, 1026, 1235, 1347, 1572
FokI	GGATG	2 cut(s)	1207, 1219
FriOI	GRGCYC	1 cut(s)	81
Fsp4HI	GCNGC	7 cut(s)	416, 951, 975, 1026, 1235, 1347, 1572
FspBI	CTAG	3 cut(s)	71, 230, 1305
GlaI	GCGC	2 cut(s)	993, 1440
GluI	GCNGC	7 cut(s)	416, 951, 975, 1026, 1235, 1347, 1572
GsuI	CTGGAG	1 cut(s)	1326
HaeIII	GGCC	2 cut(s)	58, 611
HapII	CCGG	6 cut(s)	390, 560, 612, 1226, 1292, 1376
HgaI	GACGC	2 cut(s)	383, 1430
HhaI	GCGC	2 cut(s)	994, 1441
Hin1I	GRCGYC	1 cut(s)	394
Hin1II	CATG	6 cut(s)	22, 68, 176, 1333, 1450, 1465
Hin6I	GCGC	2 cut(s)	992, 1439
HinP1I	GCGC	2 cut(s)	992, 1439
HincII	GTYRAC	1 cut(s)	895
HindII	GTYRAC	1 cut(s)	895
HindIII	AAGCTT	1 cut(s)	566
HinfI	GANTC	7 cut(s)	139, 226, 929, 962, 1018, 1384, 1522
HpaII	CCGG	6 cut(s)	390, 560, 612, 1226, 1292, 1376
HphI	GGTGA	1 cut(s)	402
Hpy166II	GTNNAC	3 cut(s)	895, 1036, 1553
Hpy188III	TCNNGA	7 cut(s)	230, 585, 852, 1002, 1381, 1427, 1447
Hpy8I	GTNNAC	3 cut(s)	895, 1036, 1553
HpyCH4III	ACNGT	5 cut(s)	244, 357, 594, 658, 1360
HpyF10VI	GCNNNNNNNGC	7 cut(s)	343, 974, 1273, 1277, 1282, 1346, 1438
HpyF3I	CTNAG	7 cut(s)	789, 1029, 1045, 1107, 1476, 1547, 1613
Hsp92I	GRCGYC	1 cut(s)	394
Hsp92II	CATG	6 cut(s)	22, 68, 176, 1333, 1450, 1465
HspAI	GCGC	2 cut(s)	992, 1439
Ksp22I	TGATCA	4 cut(s)	148, 175, 499, 1321
LmnI	GCTCC	5 cut(s)	299, 1345, 1429, 1508, 1568
Lsp1109I	GCAGC	7 cut(s)	427, 937, 961, 1012, 1246, 1358, 1558
LweI	GCATC	7 cut(s)	130, 367, 910, 1003, 1139, 1164, 1398
MaeI	CTAG	3 cut(s)	71, 230, 1305
MaeIII	GTNAC	2 cut(s)	1164, 1608
MbiI	CCGCTC	1 cut(s)	1315
MboII	GAAGA	2 cut(s)	573, 831
MfeI	CAATTG	3 cut(s)	330, 724, 1149
MflI	RGATCY	1 cut(s)	578
MhlI	GDGCHC	1 cut(s)	81
MlyI	GAGTC	3 cut(s)	923, 971, 1027
MmeI	TCCRAC	1 cut(s)	848
MroXI	GAANNNNTTC	3 cut(s)	275, 568, 1490
MseI	TTAA	6 cut(s)	426, 489, 537, 1071, 1589, 1621
MslI	CAYNNNNRTG	2 cut(s)	321, 1334
MspA1I	CMGCKG	1 cut(s)	974
MspI	CCGG	6 cut(s)	390, 560, 612, 1226, 1292, 1376
MspR9I	CCNGG	5 cut(s)	391, 560, 561, 1012, 1227
MunI	CAATTG	3 cut(s)	330, 724, 1149
Mva1269I	GAATGC	1 cut(s)	316
MvaI	CCWGG	1 cut(s)	1012
MvnI	CGCG	2 cut(s)	1439, 1441
MwoI	GCNNNNNNNGC	7 cut(s)	343, 974, 1273, 1277, 1282, 1346, 1438
NciI	CCSGG	4 cut(s)	391, 560, 561, 1227
NlaIII	CATG	6 cut(s)	22, 68, 176, 1333, 1450, 1465
NlaIV	GGNNCC	6 cut(s)	736, 1212, 1310, 1341, 1504, 1536
NmuCI	GTSAC	2 cut(s)	1164, 1608
NspI	RCATGY	2 cut(s)	22, 1465
PagI	TCATGA	1 cut(s)	1446
PciI	ACATGT	1 cut(s)	18
PcsI	WCGNNNNNNNCGW	2 cut(s)	662, 833
PctI	GAATGC	1 cut(s)	316
PdmI	GAANNNNTTC	3 cut(s)	275, 568, 1490
PfeI	GAWTC	4 cut(s)	139, 226, 1384, 1522
PflFI	GACNNNGTC	1 cut(s)	1471
PinAI	ACCGGT	1 cut(s)	1375
PkrI	GCNGC	7 cut(s)	417, 952, 976, 1027, 1236, 1348, 1573
PleI	GAGTC	3 cut(s)	923, 970, 1026
PpsI	GAGTC	3 cut(s)	923, 970, 1026
PscI	ACATGT	1 cut(s)	18
PshBI	ATTAAT	1 cut(s)	489
Psp124BI	GAGCTC	1 cut(s)	81
Psp6I	CCWGG	1 cut(s)	1010
PspGI	CCWGG	1 cut(s)	1010
PspN4I	GGNNCC	6 cut(s)	736, 1212, 1310, 1341, 1504, 1536
PspPI	GGNCC	2 cut(s)	326, 1033
PstI	CTGCAG	2 cut(s)	577, 979
PsuI	RGATCY	1 cut(s)	578
PsyI	GACNNNGTC	1 cut(s)	1471
PvuII	CAGCTG	1 cut(s)	974
RsaI	GTAC	1 cut(s)	1515
RsaNI	GTAC	1 cut(s)	1514
RseI	CAYNNNNRTG	2 cut(s)	321, 1334
SacI	GAGCTC	1 cut(s)	81
SaqAI	TTAA	6 cut(s)	426, 489, 537, 1071, 1589, 1621
SatI	GCNGC	7 cut(s)	416, 951, 975, 1026, 1235, 1347, 1572
Sau96I	GGNCC	2 cut(s)	326, 1033
SchI	GAGTC	3 cut(s)	923, 971, 1027
ScrFI	CCNGG	5 cut(s)	391, 560, 561, 1012, 1227
SduI	GDGCHC	1 cut(s)	81
SfaNI	GCATC	7 cut(s)	130, 367, 910, 1003, 1139, 1164, 1398
SfcI	CTRYAG	2 cut(s)	573, 975
SinI	GGWCC	2 cut(s)	326, 1033
SmaI	CCCGGG	1 cut(s)	561
SmiMI	CAYNNNNRTG	2 cut(s)	321, 1334
SmlI	CTYRAG	3 cut(s)	266, 624, 959
SmoI	CTYRAG	3 cut(s)	266, 624, 959
SpeI	ACTAGT	1 cut(s)	70
SsiI	CCGC	6 cut(s)	263, 413, 629, 846, 1203, 1313
SspI	AATATT	1 cut(s)	48
SspMI	CTAG	3 cut(s)	71, 230, 1305
SstI	GAGCTC	1 cut(s)	81
StyD4I	CCNGG	5 cut(s)	389, 558, 559, 1010, 1225
StyI	CCWWGG	1 cut(s)	1304
TaaI	ACNGT	5 cut(s)	244, 357, 594, 658, 1360
TaqI	TCGA	7 cut(s)	8, 75, 124, 279, 665, 997, 1007
TatI	WGTACW	1 cut(s)	1513
TfiI	GAWTC	4 cut(s)	139, 226, 1384, 1522
Tru1I	TTAA	6 cut(s)	426, 489, 537, 1071, 1589, 1621
Tru9I	TTAA	6 cut(s)	426, 489, 537, 1071, 1589, 1621
TscAI	CASTG	2 cut(s)	745, 1331
TseFI	GTSAC	2 cut(s)	1164, 1608
TseI	GCWGC	7 cut(s)	415, 950, 974, 1025, 1234, 1346, 1571
Tsp45I	GTSAC	2 cut(s)	1164, 1608
TspDTI	ATGAA	5 cut(s)	81, 764, 1346, 1463, 1499
TspGWI	ACGGA	1 cut(s)	1072
TspMI	CCCGGG	1 cut(s)	559
TspRI	CASTG	2 cut(s)	745, 1331
Tth111I	GACNNNGTC	1 cut(s)	1471
VpaK11BI	GGWCC	2 cut(s)	326, 1033
VspI	ATTAAT	1 cut(s)	489
XapI	RAATTY	3 cut(s)	211, 271, 616
XbaI	TCTAGA	1 cut(s)	229
XceI	RCATGY	2 cut(s)	22, 1465
XmaI	CCCGGG	1 cut(s)	559
XmaJI	CCTAGG	1 cut(s)	1304
XmiI	GTMKAC	1 cut(s)	1552
XmnI	GAANNNNTTC	3 cut(s)	275, 568, 1490
XspI	CTAG	3 cut(s)	71, 230, 1305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.