Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0002725

Physical Location & Seq

Genomic Coordinates Reverse (-)

17273649 .. 17283037

Gene Structure 9389 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4260 bp

ATGGAAGAAGTATTTGCGAGTGCCACGCACTCGAGAAGAAGCAGCCACGTCGACGAAGACGAAGAAGCTCTCACATGGGCTGCCATCGAGAAACTGCCCACCTATGATCGGCTAAGAACAAGCATCATAAAGTCCCTCGGGGAAACTGAGCCTCAAGGAGTACATAAGCAAGTAGACGTTCTGAAGCTCGACATCAACGACCGTCAGAATTTCATTGACAGGATTTTCAAGGTTGCAGAGGAAGATAATGACAAGTTCCTGAAAAAGTTCAGAAGTAGAATTGATAAGGTTGGGATCAGACTTCCCACAGTGGAAGTAAGGTTTGAACATTTGACAGTTGAAGCTGATTGCCATATTGGAACAAGAGCTCTTCCCACCCTCCCAAACGTTGCTCGGAACATCGCAGAATCGGCTCTTGGCTTAATTGGGATTAAGTTGACTAAGCAAACCAAATTAACAATTCTGAAAGATGTTTCTGGCATTGTTAAACCTTCTAGGATGGCCCTTTTATTAGGTCCCCCATCCTCGGGTAAAACTACCCTTTTGCTGGCTTTAGCTGGGAAGTTGGATCCAAGCTTGGAGGTTAAAGGAGAGGTGAGCTACAATGGTCACAGTCTGAAGGAATTTGTACCACAGAAGACATCTGCGTACATTAGCCAAAACGATGTTCATGTTGGAAATATGACGGTTAGAGAAACTCTGGATTTTTCAGCAAGGTGTCAAGGGGTTGGCTCTCGATATGAACTTCTTTCTGAGCTTGCTAGAAGAGAAAAGGCCGCTGGTATATATCCAGAACCAGAAGTAGACTTTTTCATGAAGGCTACTTCAATGGGAGGAGTTGAGAGCAGTATCATTACTGATTATACTCTAAAAATTTTGGGGCTTGATATATGTAAGGACACACTTGTCGGAGATGAGATGCAAAGAGGAATATCTGGTGGCCAGAAAAAACGAGTAACCACAGGTGAGATGATTGTTGGACCAACTAAAACATTGTTTATGGATGAAATCTCAACGGGTCTCGATAGCTCCACGACATTCCAAATCGTGAAGTGCCTACAACAAATTGTACACATCACTGAGGCTACAATCTTGATGTCTCTACTCCAACCAGCTCCTGAGACATATGATCTTTTCGATGATATCGTCCTCATATCAGAAGGCCAGATTGTCTACCAAGGACCACGAGTGAATATATTACAATTCTTTGAGACATGTGGATTTCGATGCCCTGAGAGAAAGGGAACTGCCGATTTCTTGCAAGAGGTTACCTCAAGAAAAGACCAAGAGCAGTATTGGGCAGATAGAAGGACTCCATACAGATATGTATCGGTCACAGAATTTGCAAACCAGTTCAAGCGTTTCCATGTGGGCATGAGGATGGAGAATGAGCTCTCAATCCCATTCGACAAGGCTCGAGGCCACAAAGCAGCTCTTGAATTCAGAAGATATTCAATACCCAAAATGCAGCTTCTCAAAGCCTGTTTTGACAAAGAATGGTTGCTCATGCAGAGGAACTCTTTTATTTACATTTTCAAGACTGTCCAAATTATAATAGGGGCATTCATAGCCGCGACAGTGTTTTTGAAGACCGAAATGAACACTAGGAATGAAGATGATGGAGCAGTCTATGTTGGTGCACTTATATTTGTCATGATCATTAACATGTTTAATGGTTTTGCTGAGCTCTCATTGGCCATTTCAAGACTTCCTGTGTTTTACAAGCACAGAGACCTTCTTTTCCACCCTGCTTGGACTTTCACTCTCCCATCTGTCCTGCTTGGGATTCCTATATCCATCATGGAAACTACTATTTGGATGGCCATTACATATTACACCATCGGATTTGCACCTGAAGCTAGCAGGTTTTTCAAGCAACTATTGTTGGTATTTCTGATCCAACAAATGGCAGCTGGGCTATTTAGGCTTATAGCTGGAGTTAGCAGGACCATCATCATAGCAAACACCGGCGGGTCTCTAAGTGTTCTAATTGTTTTTATGCTTGGAGGTTTCATTATTCCTCATGATAATATTACCAGTGTGGGTGAGGCAGTGCTTAAAAACTTTGATGTTTACCGCAACAAAAACTGGTTTTGGATTGGCTCTGCAGCTCTTCTGGGGTTTGCAGTTCTCTTCAACGTGCTTTATACGCTCGCCCTTATGTACCTAAATGCTCCTGGAAAGCCACAAGCCATCATATCTGAAGAAGCAGCAAACAAGATGGAGGTAGACCAAGAAGAATCAAAGGAAGAGCCAAGACTTAGAAGGCCCCCGTCCAAGAAAGATTTTCAGTCTCGATCATTATCTTCTAATGATGGAAACAACTCAAGAGAAATGGAAGTCCGGCGAATGGGCAGTCGATCCAGCTCTACTGGACTAAGTAGAAATCCTGATTCGTCTCTCGAAGTTGCCAGTGGTGTTGCCCCTAAAAGAGGAATGGTTCTACCTTTCACTCCTCTTGCAATGTCCTTCAACGATGTTAACTATTACGAAATGAAGGAAGAAGGAGTAGCAGGGGACCGGCTGCAACTACTCCGTGAAGTAACTGGTGCATTTAGGCCTGGGGTCTTGACTGCCTTAATGGGGGTCAGTGGGGCTGGGAAGACAACTTTGATGGATGTCTTAGCAGGAAGGAAGACCGGAGGTTATATTGAAGGTGACATTAGAATTTCTGGGTACCCTAAGAAGCAAGAAACCTTTGCAAGAATTTCTGGTTATTGCGAACAAACTGATATCCACTCACCCCAAGTCACTGTCAAAGAATCATTGATCTATTCAGCTTTCCTTAGACTCCCTAAAGAAGTTAGCAACAAGGAAAAGATGATTTTTGTTGATCAAGTGATGGAATTGGTTGAGCTAGATAATCTCAAAGATGCTTTAGTAGGACTTCCTGGAGTTTCAGGACTGTCAACAGAACAAAGAAAGAGGTTAACGATTGCAGTTGAGCTTGTTGCCAATCCCTCGATCATTTTCATGGATGAACCCACATCAGGTCTTGATGCAAGGGCAGCTGCCATTGTTATGAGGACTGTTAGAAATACTGTGGACACTGGGAGAACAGTTGTTTGCACAATTCATCAGCCCAGCATAGATATCTTTGAGGCATTTGATGAGCTGCTATTGATGAAGAGAGGAGGACAAGTTATCTACTCAGGATCACTAGGCCGCAATTCTCACAAGATTGTTGAATACTTTGAGGCAGTTCCTGGCGTGACAAAAATCAAAGAGAAGTATAACCCAGCAACGTGGATGCTCGAGGTGAGCTCAACCTCAACTGAGGTCCGTCTTGGAATGGACTTTGCTCAATACTACAAATCATCTGCCTTGTACCAGAGAAACAAAGCTTTAGTAAAGGAGTTGAGCGTCCCACCAGCAGGAGCAAAAGACCTCTATTTTCCGACCCAGTTTTCTCAATCGTCATGGAAGCAATTCCAATCTTGCCTCTGGAAGCAGTGGTGGACATATTGGAGAAGTCCTGATTATAACCTTGTCAGATTCTTTTTTACCTTGGCAGCTGCTCTCCTCCTTGGAACTATTTTCTGGAAGGTTGGCACTAAAAGGGAAAGCAGTTCTGATCTGACCATGATTATCGGGGCTATGTACGCTGCTGTGCTTTTCGTCGGAATTGATAACTGCGCAACTGTGCAGCCAATTGTCGCCATTGAAAGAACTGTTTTCTATCGAGAACGAGCTGCTGGGATGTACTCTGCATTACCTTATGCACTGGCACAGGTCATTGTGGAAATACCGTATGTGTTTATTCAGACCACGTATTATACACTGATAGTGTATGCTATGGTGAGCTTCCAATGGAAAGTAGAAAAATTCTTCTGGTTCTTCTTTATCAACTTCTTCTCCTTCCTTTACTTCACATACTACGGCATGATGACCGTTTCCATCACGCCAAACCACCAAGTAGCAGCCATATTCGCCGCAGCTTTCTATTCAGTCTTCAACCTCTTCTCCGGTTTCTTCATTCCAAGACCAAAAATACCCAAATGGTGGGTTTGGTACTACTGGATATGTCCCGTGGCATGGACGGTGTATGGATTGATTGTGTCACAGTATGGCGATGTTGAGGAAACCATTAGAGCACCTGGGATTACACCTAACCCAACTATAAAATGGTACATAGAAGACCATTTCGGATATGATCCAAATTTCATGGGACCAGTGGCTGGAGTTCTAGTTGGATTCACAATCTTCTTTGCCTTCATGTTTGCCTACTGTATTAGGACACTCAACTTCCAAGTTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1420

Amino Acids

160.19

Weight (kDa)

8.42

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_trans_N	PF14510	80 - 130	2e-09	ABC-transporter N-terminal
ABC_tran	PF00005	155 - 336	6.1e-15	ABC transporter
ABC2_membrane	PF01061	491 - 678	3.8e-40	ABC-2 type transporter
PDR_assoc	PF08370	675 - 733	5.8e-24	Plant PDR ABC transporter associated
ABC_tran	PF00005	846 - 997	5.8e-20	ABC transporter
ABC2_membrane	PF01061	1143 - 1356	3.7e-63	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15210 AT1G59870 AT3G16340 AT3G16340
fragaria_vesca	FvH4_6g32310 FvH4_6g32310
malus_domestica	MD09G1203500.v1.1 MD09G1204000.v1.1 MD09G1204200.v1.1 MD09G1204300.v1.1 MD17G1184700.v1.1
prunus_persica	Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059800_v2.0.a1 Prupe.3G059900_v2.0.a1 Prupe.3G060000_v2.0.a1 Prupe.3G060000_v2.0.a1
pyrus_communis	pycom09g12060 pycom09g12080 pycom09g12130 pycom17g19420
rosa_chinensis	RchiOBHm_Chr2g0140401
rosa_laevigata	RLG00000019862
rosa_multiflora	Rmu_sc0008211.1_g000001 Rmu_sc0010411.1_g000005 Rmu_sc0019541.1_g000001 Rmu_sc0019542.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104910
rosa_rugosa	Rorug02G0361800 Rorug02G0361900 Rorug02G0362000 Rorug02G0362100 Rorug02G0362100
rosa_samantha	Rh2AG413100 Rh2BG423600 Rh2CG399300 Rh2DG432500
rosa_wichuraiana	Rw2G033870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1553, 3483
AasI	GACNNNNNNGTC	1 cut(s)	905
Acc16I	TGCGCA	1 cut(s)	3637
Acc36I	ACCTGC	1 cut(s)	1854
Acc65I	GGTACC	1 cut(s)	2676
AccB1I	GGYRCC	1 cut(s)	2676
AccB7I	CCANNNNNTGG	3 cut(s)	1906, 4002, 4178
AccI	GTMKAC	5 cut(s)	51, 174, 804, 1173, 2229
AccII	CGCG	1 cut(s)	1574
AciI	CCGC	6 cut(s)	777, 1572, 1971, 2077, 3166, 3933
AclI	AACGTT	1 cut(s)	387
AclWI	GGATC	7 cut(s)	302, 563, 576, 1891, 2355, 3163, 4148
AcoI	YGGCCR	3 cut(s)	940, 1695, 1821
AcsI	RAATTY	9 cut(s)	208, 623, 873, 1340, 1439, 2667, 2706, 3824, 4159
AcuI	CTGAAG	4 cut(s)	203, 638, 1875, 2223
AflIII	ACRYGT	2 cut(s)	1214, 1665
AjiI	CACGTC	1 cut(s)	49
AjnI	CCWGG	5 cut(s)	2176, 2560, 2890, 3205, 4096
AjuI	GAANNNNNNNTTGG	4 cut(s)	399, 431, 651, 683
Alw21I	GWGCWC	6 cut(s)	370, 1395, 1642, 1689, 3266, 4096
Alw26I	GTCTC	8 cut(s)	1025, 1104, 1115, 1205, 1725, 1980, 2298, 2403
Alw44I	GTGCAC	1 cut(s)	1638
AlwI	GGATC	7 cut(s)	302, 563, 576, 1891, 2355, 3163, 4148
AlwNI	CAGNNNCTG	3 cut(s)	1118, 3206, 4178
Ama87I	CYCGRG	5 cut(s)	31, 137, 526, 1416, 3254
ApaLI	GTGCAC	1 cut(s)	1638
ApoI	RAATTY	9 cut(s)	208, 623, 873, 1340, 1439, 2667, 2706, 3824, 4159
ArsI	GACNNNNNNTTYG	4 cut(s)	1567, 1599, 2341, 2373
Asp700I	GAANNNNTTC	3 cut(s)	266, 1450, 3428
Asp718I	GGTACC	1 cut(s)	2676
AspLEI	GCGC	1 cut(s)	3638
AspS9I	GGNCC	9 cut(s)	502, 515, 980, 1181, 1947, 2268, 2518, 3280, 4169
AsuHPI	GGTGA	7 cut(s)	607, 977, 2057, 2669, 2733, 3271, 3811
AsuNHI	GCTAGC	1 cut(s)	1859
AvaI	CYCGRG	5 cut(s)	31, 137, 526, 1416, 3254
AvaII	GGWCC	7 cut(s)	515, 980, 1181, 1947, 2518, 3280, 4169
BaeGI	GKGCMC	1 cut(s)	1642
BalI	TGGCCA	3 cut(s)	942, 1697, 1823
BamHI	GGATCC	1 cut(s)	568
BanI	GGYRCC	1 cut(s)	2676
BanII	GRGCYC	4 cut(s)	370, 1395, 1689, 3266
BauI	CACGAG	1 cut(s)	1185
BbsI	GAAGAC	7 cut(s)	63, 644, 1595, 2609, 2642, 3943, 4143
Bbv12I	GWGCWC	6 cut(s)	370, 1395, 1642, 1689, 3266, 4096
BceAI	ACGGC	1 cut(s)	3895
BcgI	CGANNNNNNTGC	2 cut(s)	31, 65
BciT130I	CCWGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
BclI	TGATCA	2 cut(s)	1656, 2833
BcoDI	GTCTC	8 cut(s)	1025, 1104, 1115, 1205, 1725, 1980, 2298, 2403
BfaI	CTAG	7 cut(s)	495, 762, 1605, 1860, 2858, 3161, 4187
BfmI	CTRYAG	1 cut(s)	2106
BfuAI	ACCTGC	1 cut(s)	1854
BlpI	GCTNAGC	1 cut(s)	1683
Bme1390I	CCNGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
Bme18I	GGWCC	7 cut(s)	515, 980, 1181, 1947, 2518, 3280, 4169
BmeT110I	CYCGRG	5 cut(s)	31, 137, 526, 1416, 3254
BmgBI	CACGTC	1 cut(s)	49
BmgT120I	GGNCC	9 cut(s)	502, 515, 980, 1181, 1947, 2268, 2518, 3280, 4169
BmiI	GGNNCC	6 cut(s)	517, 570, 2270, 2519, 2678, 4170
BmrFI	CCNGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
BmrI	ACTGGG	2 cut(s)	3060, 3397
BmsI	GCATC	6 cut(s)	132, 909, 1217, 2863, 2989, 3240
BmtI	GCTAGC	1 cut(s)	1863
BmuI	ACTGGG	2 cut(s)	3060, 3397
BpiI	GAAGAC	7 cut(s)	63, 644, 1595, 2609, 2642, 3943, 4143
BplI	GAGNNNNNCTC	4 cut(s)	1256, 1288, 3248, 3280
BpmI	CTGGAG	3 cut(s)	1956, 2913, 4200
Bpu1102I	GCTNAGC	1 cut(s)	1683
BpuEI	CTTGAG	3 cut(s)	138, 1258, 2311
BsaAI	YACGTR	1 cut(s)	3771
BsaBI	GATNNNNATC	2 cut(s)	1327, 2302
BsaI	GGTCTC	3 cut(s)	1025, 1725, 1980
BsaJI	CCNNGG	8 cut(s)	136, 525, 1177, 2561, 3507, 3526, 4029, 4097
BsaWI	WCCGGW	2 cut(s)	2639, 3965
BsaXI	ACNNNNNCTCC	8 cut(s)	3126, 3156, 3839, 3869, 3947, 3977, 4173, 4203
Bse118I	RCCGGY	2 cut(s)	1967, 2520
Bse3DI	GCAATG	1 cut(s)	2469
Bse8I	GATNNNNATC	2 cut(s)	1327, 2302
BseBI	CCWGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
BseDI	CCNNGG	8 cut(s)	136, 525, 1177, 2561, 3507, 3526, 4029, 4097
BseGI	GGATG	9 cut(s)	504, 521, 1009, 1386, 1824, 2623, 2983, 3255, 3705
BseJI	GATNNNNATC	2 cut(s)	1327, 2302
BseMI	GCAATG	1 cut(s)	2469
BseMII	CTCAG	8 cut(s)	138, 744, 1071, 1110, 1224, 1674, 3165, 3267
BseRI	GAGGAG	4 cut(s)	849, 2445, 3147, 3512
BseSI	GKGCMC	1 cut(s)	1642
BseYI	CCCAGC	6 cut(s)	557, 1913, 2597, 3083, 3238, 3695
BsgI	GTGCAG	1 cut(s)	3665
Bsh1236I	CGCG	1 cut(s)	1574
Bsh1285I	CGRYCG	1 cut(s)	202
BshNI	GGYRCC	1 cut(s)	2676
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	6 cut(s)	370, 1395, 1642, 1689, 3266, 4096
BsiHKCI	CYCGRG	5 cut(s)	31, 137, 526, 1416, 3254
BsiSI	CCGG	5 cut(s)	1968, 2344, 2521, 2640, 3966
BslFI	GGGAC	6 cut(s)	118, 501, 2531, 3350, 4011, 4182
BsmAI	GTCTC	8 cut(s)	1025, 1104, 1115, 1205, 1725, 1980, 2298, 2403
BsmBI	CGTCTC	1 cut(s)	2403
BsmFI	GGGAC	6 cut(s)	118, 501, 2531, 3350, 4011, 4182
BsmI	GAATGC	1 cut(s)	1562
Bso31I	GGTCTC	3 cut(s)	1025, 1725, 1980
BsoBI	CYCGRG	5 cut(s)	31, 137, 526, 1416, 3254
Bsp1286I	GDGCHC	6 cut(s)	370, 1395, 1642, 1689, 3266, 4096
Bsp1407I	TGTACA	1 cut(s)	1069
Bsp1720I	GCTNAGC	1 cut(s)	1683
BspACI	CCGC	6 cut(s)	777, 1572, 1971, 2077, 3166, 3933
BspCNI	CTCAG	8 cut(s)	139, 745, 1072, 1111, 1225, 1675, 3164, 3268
BspFNI	CGCG	1 cut(s)	1574
BspHI	TCATGA	3 cut(s)	813, 1653, 2023
BspLI	GGNNCC	6 cut(s)	517, 570, 2270, 2519, 2678, 4170
BspMAI	CTGCAG	1 cut(s)	2110
BspMI	ACCTGC	1 cut(s)	1854
BspOI	GCTAGC	1 cut(s)	1863
BspPI	GGATC	7 cut(s)	302, 563, 576, 1891, 2355, 3163, 4148
BspQI	GCTCTTC	3 cut(s)	375, 2118, 2244
BspT107I	GGYRCC	1 cut(s)	2676
BspTNI	GGTCTC	3 cut(s)	1025, 1725, 1980
BsrDI	GCAATG	1 cut(s)	2469
BsrFI	RCCGGY	2 cut(s)	1967, 2520
BsrGI	TGTACA	1 cut(s)	1069
BssAI	RCCGGY	2 cut(s)	1967, 2520
BssECI	CCNNGG	8 cut(s)	136, 525, 1177, 2561, 3507, 3526, 4029, 4097
BssSI	CACGAG	1 cut(s)	1185
BssT1I	CCWWGG	3 cut(s)	1177, 3507, 3526
Bst2BI	CACGAG	1 cut(s)	1185
Bst2UI	CCWGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
Bst6I	CTCTTC	7 cut(s)	375, 760, 2118, 2138, 2244, 3122, 3965
BstAUI	TGTACA	1 cut(s)	1069
BstBAI	YACGTR	1 cut(s)	3771
BstC8I	GCNNGC	4 cut(s)	549, 759, 1861, 2154
BstDSI	CCRYGG	1 cut(s)	4029
BstEII	GGTNACC	1 cut(s)	1267
BstENI	CCTNNNNNAGG	1 cut(s)	2430
BstF5I	GGATG	9 cut(s)	504, 521, 1009, 1386, 1824, 2623, 2983, 3255, 3705
BstFNI	CGCG	1 cut(s)	1574
BstHHI	GCGC	1 cut(s)	3638
BstMAI	GTCTC	8 cut(s)	1025, 1104, 1115, 1205, 1725, 1980, 2298, 2403
BstMCI	CGRYCG	1 cut(s)	202
BstMWI	GCNNNNNNNGC	8 cut(s)	410, 1568, 1856, 1924, 2149, 3008, 3602, 3929
BstNI	CCWGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
BstNSI	RCATGY	2 cut(s)	1218, 1669
BstPI	GGTNACC	1 cut(s)	1267
BstSCI	CCNGG	5 cut(s)	2176, 2560, 2890, 3205, 4096
BstSFI	CTRYAG	1 cut(s)	2106
BstSLI	GKGCMC	1 cut(s)	1642
BstUI	CGCG	1 cut(s)	1574
BstV2I	GAAGAC	7 cut(s)	63, 644, 1595, 2609, 2642, 3943, 4143
BstX2I	RGATCY	1 cut(s)	568
BstXI	CCANNNNNNTGG	1 cut(s)	3246
BstYI	RGATCY	1 cut(s)	568
BtgI	CCRYGG	1 cut(s)	4029
BtgZI	GCGATG	2 cut(s)	385, 4086
BtrI	CACGTC	1 cut(s)	49
BtsCI	GGATG	9 cut(s)	504, 521, 1009, 1386, 1824, 2623, 2983, 3255, 3705
BtsI	GCAGTG	2 cut(s)	2058, 3458
BveI	ACCTGC	1 cut(s)	1854
Cac8I	GCNNGC	4 cut(s)	549, 759, 1861, 2154
CaiI	CAGNNNCTG	3 cut(s)	1118, 3206, 4178
CciI	TCATGA	3 cut(s)	813, 1653, 2023
CfoI	GCGC	1 cut(s)	3638
Cfr10I	RCCGGY	2 cut(s)	1967, 2520
Cfr13I	GGNCC	9 cut(s)	502, 515, 980, 1181, 1947, 2268, 2518, 3280, 4169
CseI	GACGC	1 cut(s)	3352
CspCI	CAANNNNNGTGG	2 cut(s)	1733, 1768
DrdI	GACNNNNNNGTC	1 cut(s)	905
DseDI	GACNNNNNNGTC	1 cut(s)	905
EaeI	YGGCCR	3 cut(s)	940, 1695, 1821
Eam1104I	CTCTTC	7 cut(s)	375, 760, 2118, 2138, 2244, 3122, 3965
EarI	CTCTTC	7 cut(s)	375, 760, 2118, 2138, 2244, 3122, 3965
Ecl136II	GAGCTC	4 cut(s)	368, 1393, 1687, 3264
Eco130I	CCWWGG	3 cut(s)	1177, 3507, 3526
Eco147I	AGGCCT	1 cut(s)	2560
Eco24I	GRGCYC	4 cut(s)	370, 1395, 1689, 3266
Eco31I	GGTCTC	3 cut(s)	1025, 1725, 1980
Eco32I	GATATC	3 cut(s)	1144, 2734, 3094
Eco47I	GGWCC	7 cut(s)	515, 980, 1181, 1947, 2518, 3280, 4169
Eco53kI	GAGCTC	4 cut(s)	368, 1393, 1687, 3264
Eco57I	CTGAAG	4 cut(s)	203, 638, 1875, 2223
Eco88I	CYCGRG	5 cut(s)	31, 137, 526, 1416, 3254
Eco91I	GGTNACC	1 cut(s)	1267
EcoICRI	GAGCTC	4 cut(s)	368, 1393, 1687, 3264
EcoNI	CCTNNNNNAGG	1 cut(s)	2430
EcoO109I	RGGNCCY	2 cut(s)	515, 2268
EcoO65I	GGTNACC	1 cut(s)	1267
EcoRI	GAATTC	1 cut(s)	1439
EcoRII	CCWGG	5 cut(s)	2176, 2560, 2890, 3205, 4096
EcoRV	GATATC	3 cut(s)	1144, 2734, 3094
EcoT14I	CCWWGG	3 cut(s)	1177, 3507, 3526
EcoT38I	GRGCYC	4 cut(s)	370, 1395, 1689, 3266
ErhI	CCWWGG	3 cut(s)	1177, 3507, 3526
Esp3I	CGTCTC	1 cut(s)	2403
FalI	AAGNNNNNCTT	2 cut(s)	1419, 1451
FaqI	GGGAC	6 cut(s)	118, 501, 2531, 3350, 4011, 4182
FauI	CCCGC	1 cut(s)	1964
FauNDI	CATATG	1 cut(s)	1126
FbaI	TGATCA	2 cut(s)	1656, 2833
FblI	GTMKAC	5 cut(s)	51, 174, 804, 1173, 2229
FokI	GGATG	9 cut(s)	508, 511, 1016, 1393, 1831, 2630, 2990, 3262, 3712
FriOI	GRGCYC	4 cut(s)	370, 1395, 1689, 3266
FspBI	CTAG	7 cut(s)	495, 762, 1605, 1860, 2858, 3161, 4187
FspI	TGCGCA	1 cut(s)	3637
GlaI	GCGC	1 cut(s)	3637
GsaI	CCCAGC	6 cut(s)	561, 1917, 2601, 3087, 3242, 3699
GsuI	CTGGAG	3 cut(s)	1956, 2913, 4200
HapII	CCGG	5 cut(s)	1968, 2344, 2521, 2640, 3966
HgaI	GACGC	1 cut(s)	3352
HhaI	GCGC	1 cut(s)	3638
Hin6I	GCGC	1 cut(s)	3636
HinP1I	GCGC	1 cut(s)	3636
HincII	GTYRAC	5 cut(s)	52, 438, 2482, 2910, 2931
HindII	GTYRAC	5 cut(s)	52, 438, 2482, 2910, 2931
HindIII	AAGCTT	2 cut(s)	574, 3342
HinfI	GANTC	9 cut(s)	407, 1312, 1786, 2240, 2393, 2762, 2790, 3495, 4194
HpaI	GTTAAC	2 cut(s)	2482, 2931
HpaII	CCGG	5 cut(s)	1968, 2344, 2521, 2640, 3966
HphI	GGTGA	7 cut(s)	607, 977, 2057, 2669, 2733, 3271, 3811
Hpy99I	CGWCG	3 cut(s)	53, 56, 3623
HpyCH4IV	ACGT	6 cut(s)	48, 177, 387, 2139, 3245, 3770
HpyF10VI	GCNNNNNNNGC	8 cut(s)	410, 1568, 1856, 1924, 2149, 3008, 3602, 3929
HpySE526I	ACGT	6 cut(s)	48, 177, 387, 2139, 3245, 3770
HspAI	GCGC	1 cut(s)	3636
KpnI	GGTACC	1 cut(s)	2680
Ksp22I	TGATCA	2 cut(s)	1656, 2833
KspAI	GTTAAC	2 cut(s)	2482, 2931
LguI	GCTCTTC	3 cut(s)	375, 2118, 2244
LmnI	GCTCC	5 cut(s)	1034, 1120, 1622, 2179, 3377
LweI	GCATC	6 cut(s)	132, 909, 1217, 2863, 2989, 3240
MaeI	CTAG	7 cut(s)	495, 762, 1605, 1860, 2858, 3161, 4187
MaeII	ACGT	6 cut(s)	48, 177, 387, 2139, 3245, 3770
MaeIII	GTNAC	9 cut(s)	608, 955, 1267, 1333, 2542, 2657, 2749, 3211, 4059
MfeI	CAATTG	1 cut(s)	3651
MflI	RGATCY	1 cut(s)	568
MhlI	GDGCHC	6 cut(s)	370, 1395, 1642, 1689, 3266, 4096
MlsI	TGGCCA	3 cut(s)	942, 1697, 1823
MluNI	TGGCCA	3 cut(s)	942, 1697, 1823
MlyI	GAGTC	2 cut(s)	1306, 2784
MmeI	TCCRAC	9 cut(s)	546, 655, 889, 958, 1132, 1924, 3422, 3601, 4171
Mox20I	TGGCCA	3 cut(s)	942, 1697, 1823
MroXI	GAANNNNTTC	3 cut(s)	266, 1450, 3428
MscI	TGGCCA	3 cut(s)	942, 1697, 1823
MslI	CAYNNNNRTG	4 cut(s)	1379, 1664, 2972, 3020
Msp20I	TGGCCA	3 cut(s)	942, 1697, 1823
MspA1I	CMGCKG	4 cut(s)	779, 1913, 3011, 3515
MspI	CCGG	5 cut(s)	1968, 2344, 2521, 2640, 3966
MspR9I	CCNGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
MunI	CAATTG	1 cut(s)	3651
Mva1269I	GAATGC	1 cut(s)	1562
MvaI	CCWGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
MvnI	CGCG	1 cut(s)	1574
MwoI	GCNNNNNNNGC	8 cut(s)	410, 1568, 1856, 1924, 2149, 3008, 3602, 3929
NdeI	CATATG	1 cut(s)	1126
NheI	GCTAGC	1 cut(s)	1859
NlaIV	GGNNCC	6 cut(s)	517, 570, 2270, 2519, 2678, 4170
NmuCI	GTSAC	6 cut(s)	608, 1333, 2657, 2749, 3211, 4059
NsbI	TGCGCA	1 cut(s)	3637
NspI	RCATGY	2 cut(s)	1218, 1669
PaeR7I	CTCGAG	3 cut(s)	31, 1416, 3254
PagI	TCATGA	3 cut(s)	813, 1653, 2023
PceI	AGGCCT	1 cut(s)	2560
PciI	ACATGT	2 cut(s)	1214, 1665
PciSI	GCTCTTC	3 cut(s)	375, 2118, 2244
PcsI	WCGNNNNNNNCGW	3 cut(s)	57, 195, 1143
PctI	GAATGC	1 cut(s)	1562
PdmI	GAANNNNTTC	3 cut(s)	266, 1450, 3428
PfeI	GAWTC	7 cut(s)	407, 1786, 2240, 2393, 2762, 3495, 4194
PflMI	CCANNNNNTGG	3 cut(s)	1906, 4002, 4178
PfoI	TCCNGGA	2 cut(s)	2176, 2890
PleI	GAGTC	2 cut(s)	1306, 2784
PpsI	GAGTC	2 cut(s)	1306, 2784
Ppu21I	YACGTR	1 cut(s)	3771
PpuMI	RGGWCCY	1 cut(s)	515
PscI	ACATGT	2 cut(s)	1214, 1665
PsiI	TTATAA	2 cut(s)	1553, 3483
Psp124BI	GAGCTC	4 cut(s)	370, 1395, 1689, 3266
Psp1406I	AACGTT	1 cut(s)	387
Psp5II	RGGWCCY	1 cut(s)	515
Psp6I	CCWGG	5 cut(s)	2176, 2560, 2890, 3205, 4096
PspEI	GGTNACC	1 cut(s)	1267
PspFI	CCCAGC	6 cut(s)	557, 1913, 2597, 3083, 3238, 3695
PspGI	CCWGG	5 cut(s)	2176, 2560, 2890, 3205, 4096
PspN4I	GGNNCC	6 cut(s)	517, 570, 2270, 2519, 2678, 4170
PspPI	GGNCC	9 cut(s)	502, 515, 980, 1181, 1947, 2268, 2518, 3280, 4169
PspPPI	RGGWCCY	1 cut(s)	515
PspXI	VCTCGAGB	2 cut(s)	1416, 3254
PstI	CTGCAG	1 cut(s)	2110
PstNI	CAGNNNCTG	3 cut(s)	1118, 3206, 4178
PsuI	RGATCY	1 cut(s)	568
PvuII	CAGCTG	3 cut(s)	1913, 3011, 3515
RseI	CAYNNNNRTG	4 cut(s)	1379, 1664, 2972, 3020
SacI	GAGCTC	4 cut(s)	370, 1395, 1689, 3266
SalI	GTCGAC	1 cut(s)	50
SapI	GCTCTTC	3 cut(s)	375, 2118, 2244
Sau96I	GGNCC	9 cut(s)	502, 515, 980, 1181, 1947, 2268, 2518, 3280, 4169
SchI	GAGTC	2 cut(s)	1306, 2784
ScrFI	CCNGG	5 cut(s)	2178, 2562, 2892, 3207, 4098
SduI	GDGCHC	6 cut(s)	370, 1395, 1642, 1689, 3266, 4096
SfaNI	GCATC	6 cut(s)	132, 909, 1217, 2863, 2989, 3240
SfcI	CTRYAG	1 cut(s)	2106
Sfr274I	CTCGAG	3 cut(s)	31, 1416, 3254
SgrAI	CRCCGGYG	1 cut(s)	1967
SgrDI	CGTCGACG	1 cut(s)	50
SinI	GGWCC	7 cut(s)	515, 980, 1181, 1947, 2518, 3280, 4169
SlaI	CTCGAG	3 cut(s)	31, 1416, 3254
SmiMI	CAYNNNNRTG	4 cut(s)	1379, 1664, 2972, 3020
SmlI	CTYRAG	6 cut(s)	31, 153, 1273, 1416, 2326, 3254
SmoI	CTYRAG	6 cut(s)	31, 153, 1273, 1416, 2326, 3254
SseBI	AGGCCT	1 cut(s)	2560
SsiI	CCGC	6 cut(s)	777, 1572, 1971, 2077, 3166, 3933
SspI	AATATT	1 cut(s)	2032
SspMI	CTAG	7 cut(s)	495, 762, 1605, 1860, 2858, 3161, 4187
SstI	GAGCTC	4 cut(s)	370, 1395, 1689, 3266
StuI	AGGCCT	1 cut(s)	2560
StyD4I	CCNGG	5 cut(s)	2176, 2560, 2890, 3205, 4096
StyI	CCWWGG	3 cut(s)	1177, 3507, 3526
TaiI	ACGT	6 cut(s)	51, 180, 390, 2142, 3248, 3773
TaqII	GACCGA	2 cut(s)	1321, 1607
TatI	WGTACW	3 cut(s)	160, 1069, 3702
TauI	GCSGC	4 cut(s)	779, 1574, 3168, 3935
TfiI	GAWTC	7 cut(s)	407, 1786, 2240, 2393, 2762, 3495, 4194
TseFI	GTSAC	6 cut(s)	608, 1333, 2657, 2749, 3211, 4059
Tsp45I	GTSAC	6 cut(s)	608, 1333, 2657, 2749, 3211, 4059
TspGWI	ACGGA	2 cut(s)	2525, 3272
Van91I	CCANNNNNTGG	3 cut(s)	1906, 4002, 4178
VneI	GTGCAC	1 cut(s)	1638
VpaK11BI	GGWCC	7 cut(s)	515, 980, 1181, 1947, 2518, 3280, 4169
XagI	CCTNNNNNAGG	1 cut(s)	2430
XapI	RAATTY	9 cut(s)	208, 623, 873, 1340, 1439, 2667, 2706, 3824, 4159
XceI	RCATGY	2 cut(s)	1218, 1669
XcmI	CCANNNNNNNNNTGG	1 cut(s)	4122
XhoI	CTCGAG	3 cut(s)	31, 1416, 3254
XmiI	GTMKAC	5 cut(s)	51, 174, 804, 1173, 2229
XmnI	GAANNNNTTC	3 cut(s)	266, 1450, 3428
XspI	CTAG	7 cut(s)	495, 762, 1605, 1860, 2858, 3161, 4187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.