pycom17g23870

Double-stranded RNA-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0001836
Physical Location & Seq
Forward (+)
22149298 .. 22153316
4019 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1422 bp
ATGTACAAGTCCAGGCTGCAGGAGCTCTGCCAGCAGAGGAAATGGCGGTTGCCGGAGTACAACACCGCCAAGGTTGGCCTCGATCATATCCCTTGCTTCTCCGCCACCGTTACAATCAATGGCTTCGACTTCCACACTGTGGATACCTTTAGGTCCTCCAAAGAAGCCCAAAACGACGCCGCTAAACACGCCTTCGACCACCTCTCTGATCATCCGCAACCCAAACCCAGGAATCCCATTCCCGTCCCTTCCTCTTTCCCTCAACCTTGTCTTCCCTCTTCCTCCTCCACTTCCTTTTGCTCAGCACTTCCTTCAACCGCGGCCGCTGATTCCAATACTACACATGAAGCACCACAACTAGTGCAACCGAAGATTCAAGAAACGCACCAGATTCCTCCGCTGCCACTTCAGTTTAGTGGTAACAAATCAGGAGCCACTCCTCAGGCAAATGCCACCTTGTTGAATATACAACATTTTCACAAGAATCAACTGCAAACTTATGCACAGAAGAGAAATCTGCTTCCACCTGTGTACTCTTGTGAGCGGGAAGGTCCACCTCATAACAGTCGTTTCAAGTGTAGAGTAACTATTGGTGGACAGACATTTGAGGGTCAAGAGTTTCTTCCCACACTGAAGGATGCTGAACATGCAGCTGCAAAAGCTGCTCTAATGTCCATTCTTCCAAATGGAGTTCAAGAGGATGATTCTGGTTTATTCAAAAACCTTTTACAAGAATTGATTCAAAAGGAAGGCTTTTCTATACCAGTCTATAGCTCAAGGATGTCTGGTAAACCTCATGTGCCAATTTTTGTTTCGTCAGTGGAGATAGAAGGAGAAACTTTTATGGGTCAAGAAGCAAGAAGCAAAAAGCAGGCAGAGTTGAGTGCAGCAAAGGTCGCTTACCATACCTTGAGAGAGCGTAAATCAAGTCAGGTACCTTTGGTCCCGTCCTCCGCTTGGAAAGGGCAAGAAGCTTCCGAGATCTTATGTTCAAGTTTCCAGTCAAACCCAGCTGCTGAACTACATCCACAAGCCAGGCCTAACACACCTGCGATCTTTTCTCCAAATACGAATACTAAAGAGCAGAAAAATGAGAAAAATGAAGCAAAACGTCAACGCTTGATCACTGTATCTTCAGGACCCTGCACTCCTACGTCAGGTGGGGAAGGTTCTTCCTCTGATGTTGTACATGGCTGTGCGCAGGAGACGAACCACAGAGCTAGCCCTGTGTCCCAAAATGGCTCCACTAATTGCGTTATGGACTCTTCTCTTGAGCCACCAACTAAAAGGAGTGCGTACAACAAGGTCTCTGTTTATTCACGCAAGTTAAATATCGAATATCCTGAAGGTACCACTATGTTGGCCATGAGCGATGAAACGTGGGTTGTTTGCTCACACACATGTAGGGGGAGGTTCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031048 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060145 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0070919 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:0098586 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
dsrm

Protein Analysis

474

Amino Acids

51.99

Weight (kDa)

8.51

Isoelectric Point (pI)

56.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
dsrm PF00035 2 - 68 1.3e-10 Double-stranded RNA binding motif
dsrm PF00035 161 - 223 7.4e-15 Double-stranded RNA binding motif
dsrm PF00035 240 - 304 8.3e-15 Double-stranded RNA binding motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1057
Acc16I TGCGCA 1 cut(s) 1200
Acc36I ACCTGC 1 cut(s) 1057
Acc65I GGTACC 2 cut(s) 934, 1349
AccB1I GGYRCC 2 cut(s) 934, 1349
AccB7I CCANNNNNTGG 1 cut(s) 139
AccBSI CCGCTC 1 cut(s) 544
AccII CGCG 1 cut(s) 320
AcoI YGGCCR 2 cut(s) 321, 1362
AcuI CTGAAG 4 cut(s) 392, 653, 1119, 1365
AcyI GRCGYC 1 cut(s) 177
AdeI CACNNNGTG 1 cut(s) 139
AfaI GTAC 7 cut(s) 5, 59, 533, 936, 1188, 1298, 1351
AfiI CCNNNNNNNGG 4 cut(s) 139, 228, 957, 1157
AflIII ACRYGT 1 cut(s) 1400
AgsI TTSAA 8 cut(s) 315, 377, 463, 574, 695, 718, 743, 993
AhlI ACTAGT 1 cut(s) 358
AjnI CCWGG 3 cut(s) 11, 227, 1034
AjuI GAANNNNNNNTTGG 2 cut(s) 796, 828
AluBI AGCT 7 cut(s) 25, 653, 662, 774, 974, 1013, 1220
AluI AGCT 7 cut(s) 25, 653, 662, 774, 974, 1013, 1220
Alw21I GWGCWC 1 cut(s) 27
Alw26I GTCTC 2 cut(s) 1199, 1312
AlwNI CAGNNNCTG 1 cut(s) 1016
AoxI GGCC 4 cut(s) 76, 321, 1037, 1362
ApeKI GCWGC 7 cut(s) 16, 400, 650, 653, 662, 887, 1013
Asp700I GAANNNNTTC 1 cut(s) 738
Asp718I GGTACC 2 cut(s) 934, 1349
AspLEI GCGC 1 cut(s) 1201
AspS9I GGNCC 4 cut(s) 153, 551, 943, 1139
AsuNHI GCTAGC 1 cut(s) 1220
AvaII GGWCC 4 cut(s) 153, 551, 943, 1139
AxyI CCTNAGG 1 cut(s) 441
BalI TGGCCA 1 cut(s) 1364
BanI GGYRCC 2 cut(s) 934, 1349
BanII GRGCYC 1 cut(s) 27
BbsI GAAGAC 1 cut(s) 263
Bbv12I GWGCWC 1 cut(s) 27
BbvI GCAGC 7 cut(s) 3, 387, 640, 649, 662, 899, 1000
BciT130I CCWGG 3 cut(s) 13, 229, 1036
BciVI GTATCC 1 cut(s) 136
BclI TGATCA 2 cut(s) 208, 1122
BcoDI GTCTC 2 cut(s) 1199, 1312
BcuI ACTAGT 1 cut(s) 358
BfaI CTAG 2 cut(s) 359, 1221
BfmI CTRYAG 2 cut(s) 17, 769
BfuAI ACCTGC 1 cut(s) 1057
BfuI GTATCC 1 cut(s) 136
BglII AGATCT 1 cut(s) 981
BlpI GCTNAGC 1 cut(s) 301
Bme1390I CCNGG 3 cut(s) 13, 229, 1036
Bme18I GGWCC 4 cut(s) 153, 551, 943, 1139
BmgT120I GGNCC 4 cut(s) 153, 551, 943, 1139
BmiI GGNNCC 6 cut(s) 433, 936, 945, 1141, 1243, 1351
BmrFI CCNGG 3 cut(s) 13, 229, 1036
BmsI GCATC 1 cut(s) 628
BmtI GCTAGC 1 cut(s) 1224
BpiI GAAGAC 1 cut(s) 263
Bpu1102I GCTNAGC 1 cut(s) 301
BpuEI CTTGAG 3 cut(s) 760, 931, 1292
BsaHI GRCGYC 1 cut(s) 177
BsaI GGTCTC 1 cut(s) 1312
BsaJI CCNNGG 3 cut(s) 69, 227, 318
Bsc4I CCNNNNNNNGG 4 cut(s) 139, 228, 957, 1157
Bse1I ACTGG 2 cut(s) 764, 1000
Bse21I CCTNAGG 1 cut(s) 441
BseBI CCWGG 3 cut(s) 13, 229, 1036
BseDI CCNNGG 3 cut(s) 69, 227, 318
BseGI GGATG 5 cut(s) 211, 643, 706, 786, 1024
BseLI CCNNNNNNNGG 4 cut(s) 139, 228, 957, 1157
BseMII CTCAG 2 cut(s) 315, 455
BseNI ACTGG 2 cut(s) 764, 1000
BseRI GAGGAG 2 cut(s) 274, 429
BseX3I CGGCCG 1 cut(s) 321
BseXI GCAGC 7 cut(s) 3, 387, 640, 649, 662, 899, 1000
BseYI CCCAGC 1 cut(s) 1009
BsgI GTGCAG 2 cut(s) 906, 1129
Bsh1236I CGCG 1 cut(s) 320
Bsh1285I CGRYCG 1 cut(s) 324
BshFI GGCC 4 cut(s) 78, 323, 1039, 1364
BshNI GGYRCC 2 cut(s) 934, 1349
BsiEI CGRYCG 1 cut(s) 324
BsiHKAI GWGCWC 1 cut(s) 27
BsiSI CCGG 1 cut(s) 53
BslFI GGGAC 3 cut(s) 230, 929, 1216
BslI CCNNNNNNNGG 4 cut(s) 139, 228, 957, 1157
BsmAI GTCTC 2 cut(s) 1199, 1312
BsmBI CGTCTC 1 cut(s) 1199
BsmFI GGGAC 3 cut(s) 230, 929, 1216
BsnI GGCC 4 cut(s) 78, 323, 1039, 1364
Bso31I GGTCTC 1 cut(s) 1312
Bsp1286I GDGCHC 1 cut(s) 27
Bsp1407I TGTACA 2 cut(s) 3, 1186
Bsp143I GATC 5 cut(s) 82, 208, 981, 1053, 1122
Bsp1720I GCTNAGC 1 cut(s) 301
BspANI GGCC 4 cut(s) 78, 323, 1039, 1364
BspCNI CTCAG 2 cut(s) 314, 454
BspFNI CGCG 1 cut(s) 320
BspLI GGNNCC 6 cut(s) 433, 936, 945, 1141, 1243, 1351
BspMAI CTGCAG 1 cut(s) 21
BspMI ACCTGC 1 cut(s) 1057
BspOI GCTAGC 1 cut(s) 1224
BspT107I GGYRCC 2 cut(s) 934, 1349
BspTNI GGTCTC 1 cut(s) 1312
BsrBI CCGCTC 1 cut(s) 544
BsrGI TGTACA 2 cut(s) 3, 1186
BsrI ACTGG 2 cut(s) 764, 1000
BssECI CCNNGG 3 cut(s) 69, 227, 318
BssMI GATC 5 cut(s) 82, 208, 981, 1053, 1122
BssNI GRCGYC 1 cut(s) 177
BssT1I CCWWGG 1 cut(s) 69
Bst2UI CCWGG 3 cut(s) 13, 229, 1036
Bst4CI ACNGT 4 cut(s) 109, 139, 566, 1129
Bst6I CTCTTC 3 cut(s) 283, 503, 1270
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 662
BstAUI TGTACA 2 cut(s) 3, 1186
BstC8I GCNNGC 3 cut(s) 32, 873, 1222
BstDEI CTNAG 2 cut(s) 301, 441
BstDSI CCRYGG 1 cut(s) 318
BstENI CCTNNNNNAGG 1 cut(s) 1155
BstF5I GGATG 5 cut(s) 211, 643, 706, 786, 1024
BstFNI CGCG 1 cut(s) 320
BstHHI GCGC 1 cut(s) 1201
BstKTI GATC 5 cut(s) 85, 211, 984, 1056, 1125
BstMAI GTCTC 2 cut(s) 1199, 1312
BstMBI GATC 5 cut(s) 82, 208, 981, 1053, 1122
BstMCI CGRYCG 1 cut(s) 324
BstMWI GCNNNNNNNGC 7 cut(s) 22, 31, 188, 647, 659, 662, 896
BstNI CCWGG 3 cut(s) 13, 229, 1036
BstNSI RCATGY 2 cut(s) 650, 1404
BstSCI CCNGG 3 cut(s) 11, 227, 1034
BstSFI CTRYAG 2 cut(s) 17, 769
BstUI CGCG 1 cut(s) 320
BstV1I GCAGC 7 cut(s) 3, 387, 640, 649, 662, 899, 1000
BstV2I GAAGAC 1 cut(s) 263
BstX2I RGATCY 1 cut(s) 981
BstXI CCANNNNNNTGG 1 cut(s) 1360
BstYI RGATCY 1 cut(s) 981
BstZI CGGCCG 1 cut(s) 321
Bsu36I CCTNAGG 1 cut(s) 441
BsuI GTATCC 1 cut(s) 136
BsuRI GGCC 4 cut(s) 78, 323, 1039, 1364
BtgI CCRYGG 1 cut(s) 318
BtgZI GCGATG 1 cut(s) 1386
BtsCI GGATG 5 cut(s) 211, 643, 706, 786, 1024
BtsIMutI CAGTG 4 cut(s) 135, 629, 825, 1125
BveI ACCTGC 1 cut(s) 1057
Cac8I GCNNGC 3 cut(s) 32, 873, 1222
CaiI CAGNNNCTG 1 cut(s) 1016
CciNI GCGGCCGC 1 cut(s) 321
CfoI GCGC 1 cut(s) 1201
Cfr13I GGNCC 4 cut(s) 153, 551, 943, 1139
Cfr42I CCGCGG 1 cut(s) 321
CseI GACGC 1 cut(s) 185
Csp6I GTAC 7 cut(s) 4, 58, 532, 935, 1187, 1297, 1350
CviAII CATG 6 cut(s) 344, 647, 797, 1190, 1366, 1401
CviQI GTAC 7 cut(s) 4, 58, 532, 935, 1187, 1297, 1350
DdeI CTNAG 2 cut(s) 301, 441
DpnI GATC 5 cut(s) 84, 210, 983, 1055, 1124
DpnII GATC 5 cut(s) 82, 208, 981, 1053, 1122
DraIII CACNNNGTG 1 cut(s) 139
EaeI YGGCCR 2 cut(s) 321, 1362
EagI CGGCCG 1 cut(s) 321
Eam1104I CTCTTC 3 cut(s) 283, 503, 1270
EarI CTCTTC 3 cut(s) 283, 503, 1270
EciI GGCGGA 1 cut(s) 91
Ecl136II GAGCTC 1 cut(s) 25
EclXI CGGCCG 1 cut(s) 321
Eco130I CCWWGG 1 cut(s) 69
Eco147I AGGCCT 1 cut(s) 1039
Eco24I GRGCYC 1 cut(s) 27
Eco31I GGTCTC 1 cut(s) 1312
Eco47I GGWCC 4 cut(s) 153, 551, 943, 1139
Eco52I CGGCCG 1 cut(s) 321
Eco53kI GAGCTC 1 cut(s) 25
Eco57I CTGAAG 4 cut(s) 392, 653, 1119, 1365
Eco81I CCTNAGG 1 cut(s) 441
EcoICRI GAGCTC 1 cut(s) 25
EcoNI CCTNNNNNAGG 1 cut(s) 1155
EcoO109I RGGNCCY 2 cut(s) 153, 1139
EcoRII CCWGG 3 cut(s) 11, 227, 1034
EcoT14I CCWWGG 1 cut(s) 69
EcoT38I GRGCYC 1 cut(s) 27
ErhI CCWWGG 1 cut(s) 69
Esp3I CGTCTC 1 cut(s) 1199
FaeI CATG 6 cut(s) 347, 650, 800, 1193, 1369, 1404
FalI AAGNNNNNCTT 4 cut(s) 606, 638, 737, 769
FaqI GGGAC 3 cut(s) 230, 929, 1216
FatI CATG 6 cut(s) 343, 646, 796, 1189, 1365, 1400
FauI CCCGC 1 cut(s) 537
FbaI TGATCA 2 cut(s) 208, 1122
FokI GGATG 5 cut(s) 198, 650, 713, 793, 1011
FriOI GRGCYC 1 cut(s) 27
FspBI CTAG 2 cut(s) 359, 1221
FspI TGCGCA 1 cut(s) 1200
GlaI GCGC 1 cut(s) 1200
GsaI CCCAGC 1 cut(s) 1013
HaeIII GGCC 4 cut(s) 78, 323, 1039, 1364
HapII CCGG 1 cut(s) 53
HgaI GACGC 1 cut(s) 185
HhaI GCGC 1 cut(s) 1201
Hin1I GRCGYC 1 cut(s) 177
Hin1II CATG 6 cut(s) 347, 650, 800, 1193, 1369, 1404
Hin6I GCGC 1 cut(s) 1199
HinP1I GCGC 1 cut(s) 1199
HincII GTYRAC 1 cut(s) 1115
HindII GTYRAC 1 cut(s) 1115
HindIII AAGCTT 1 cut(s) 972
HinfI GANTC 8 cut(s) 232, 329, 373, 391, 484, 704, 739, 1262
HpaII CCGG 1 cut(s) 53
Hpy166II GTNNAC 5 cut(s) 532, 554, 596, 791, 1115
Hpy188I TCNGA 3 cut(s) 208, 979, 1180
Hpy188III TCNNGA 8 cut(s) 377, 429, 614, 695, 851, 1137, 1271, 1343
Hpy8I GTNNAC 5 cut(s) 532, 554, 596, 791, 1115
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 9 cut(s) 202, 258, 321, 542, 628, 743, 824, 1160, 1340
HpyCH4III ACNGT 4 cut(s) 109, 139, 566, 1129
HpyCH4IV ACGT 3 cut(s) 1111, 1154, 1379
HpyCH4V TGCA 8 cut(s) 19, 364, 493, 503, 650, 656, 887, 1146
HpyF10VI GCNNNNNNNGC 7 cut(s) 22, 31, 188, 647, 659, 662, 896
HpyF3I CTNAG 2 cut(s) 301, 441
HpySE526I ACGT 3 cut(s) 1111, 1154, 1379
Hsp92I GRCGYC 1 cut(s) 177
Hsp92II CATG 6 cut(s) 347, 650, 800, 1193, 1369, 1404
HspAI GCGC 1 cut(s) 1199
KpnI GGTACC 2 cut(s) 938, 1353
Ksp22I TGATCA 2 cut(s) 208, 1122
KspI CCGCGG 1 cut(s) 321
Kzo9I GATC 5 cut(s) 82, 208, 981, 1053, 1122
LmnI GCTCC 3 cut(s) 22, 431, 1247
Lsp1109I GCAGC 7 cut(s) 3, 387, 640, 649, 662, 899, 1000
LweI GCATC 1 cut(s) 628
MaeI CTAG 2 cut(s) 359, 1221
MaeII ACGT 3 cut(s) 1111, 1154, 1379
MaeIII GTNAC 3 cut(s) 109, 419, 583
MalI GATC 5 cut(s) 84, 210, 983, 1055, 1124
MbiI CCGCTC 1 cut(s) 544
MboI GATC 5 cut(s) 82, 208, 981, 1053, 1122
MboII GAAGA 9 cut(s) 263, 270, 382, 520, 614, 671, 1125, 1164, 1257
MflI RGATCY 1 cut(s) 981
MhlI GDGCHC 1 cut(s) 27
MlsI TGGCCA 1 cut(s) 1364
MluCI AATT 3 cut(s) 734, 804, 1249
MluNI TGGCCA 1 cut(s) 1364
MlyI GAGTC 1 cut(s) 1256
Mox20I TGGCCA 1 cut(s) 1364
MroXI GAANNNNTTC 1 cut(s) 738
MscI TGGCCA 1 cut(s) 1364
MseI TTAA 1 cut(s) 1328
MslI CAYNNNNRTG 2 cut(s) 1194, 1399
Msp20I TGGCCA 1 cut(s) 1364
MspA1I CMGCKG 5 cut(s) 320, 326, 400, 653, 1013
MspI CCGG 1 cut(s) 53
MspR9I CCNGG 3 cut(s) 13, 229, 1036
MvaI CCWGG 3 cut(s) 13, 229, 1036
MvnI CGCG 1 cut(s) 320
MwoI GCNNNNNNNGC 7 cut(s) 22, 31, 188, 647, 659, 662, 896
NdeII GATC 5 cut(s) 82, 208, 981, 1053, 1122
NheI GCTAGC 1 cut(s) 1220
NlaIII CATG 6 cut(s) 347, 650, 800, 1193, 1369, 1404
NlaIV GGNNCC 6 cut(s) 433, 936, 945, 1141, 1243, 1351
NotI GCGGCCGC 1 cut(s) 321
NsbI TGCGCA 1 cut(s) 1200
NspI RCATGY 2 cut(s) 650, 1404
PaqCI CACCTGC 1 cut(s) 1057
PceI AGGCCT 1 cut(s) 1039
PciI ACATGT 1 cut(s) 1400
PdmI GAANNNNTTC 1 cut(s) 738
PfeI GAWTC 7 cut(s) 232, 329, 373, 391, 484, 704, 739
PflMI CCANNNNNTGG 1 cut(s) 139
PleI GAGTC 1 cut(s) 1256
PpsI GAGTC 1 cut(s) 1256
PpuMI RGGWCCY 2 cut(s) 153, 1139
PscI ACATGT 1 cut(s) 1400
Psp124BI GAGCTC 1 cut(s) 27
Psp5II RGGWCCY 2 cut(s) 153, 1139
Psp6I CCWGG 3 cut(s) 11, 227, 1034
PspFI CCCAGC 1 cut(s) 1009
PspGI CCWGG 3 cut(s) 11, 227, 1034
PspN4I GGNNCC 6 cut(s) 433, 936, 945, 1141, 1243, 1351
PspPI GGNCC 4 cut(s) 153, 551, 943, 1139
PspPPI RGGWCCY 2 cut(s) 153, 1139
PstI CTGCAG 1 cut(s) 21
PstNI CAGNNNCTG 1 cut(s) 1016
PsuI RGATCY 1 cut(s) 981
PvuII CAGCTG 2 cut(s) 653, 1013
RsaI GTAC 7 cut(s) 5, 59, 533, 936, 1188, 1298, 1351
RsaNI GTAC 7 cut(s) 4, 58, 532, 935, 1187, 1297, 1350
RseI CAYNNNNRTG 2 cut(s) 1194, 1399
SacI GAGCTC 1 cut(s) 27
SacII CCGCGG 1 cut(s) 321
SaqAI TTAA 1 cut(s) 1328
Sau3AI GATC 5 cut(s) 82, 208, 981, 1053, 1122
Sau96I GGNCC 4 cut(s) 153, 551, 943, 1139
SchI GAGTC 1 cut(s) 1256
ScrFI CCNGG 3 cut(s) 13, 229, 1036
SduI GDGCHC 1 cut(s) 27
SfaNI GCATC 1 cut(s) 628
SfcI CTRYAG 2 cut(s) 17, 769
Sfr303I CCGCGG 1 cut(s) 321
SgrBI CCGCGG 1 cut(s) 321
SinI GGWCC 4 cut(s) 153, 551, 943, 1139
SmiMI CAYNNNNRTG 2 cut(s) 1194, 1399
SmlI CTYRAG 3 cut(s) 775, 910, 1271
SmoI CTYRAG 3 cut(s) 775, 910, 1271
SpeI ACTAGT 1 cut(s) 358
Sse9I AATT 3 cut(s) 734, 804, 1249
SseBI AGGCCT 1 cut(s) 1039
SspMI CTAG 2 cut(s) 359, 1221
SstI GAGCTC 1 cut(s) 27
StuI AGGCCT 1 cut(s) 1039
StyD4I CCNGG 3 cut(s) 11, 227, 1034
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 4 cut(s) 109, 139, 566, 1129
TaiI ACGT 3 cut(s) 1114, 1157, 1382
TaqI TCGA 4 cut(s) 81, 126, 195, 1335
TasI AATT 3 cut(s) 734, 804, 1249
TatI WGTACW 4 cut(s) 3, 57, 531, 1186
TauI GCSGC 3 cut(s) 182, 323, 326
TfiI GAWTC 7 cut(s) 232, 329, 373, 391, 484, 704, 739
Tru1I TTAA 1 cut(s) 1328
Tru9I TTAA 1 cut(s) 1328
TscAI CASTG 4 cut(s) 142, 636, 825, 1132
TseI GCWGC 7 cut(s) 16, 400, 650, 653, 662, 887, 1013
TspDTI ATGAA 4 cut(s) 360, 1116, 1389, 1405
TspRI CASTG 4 cut(s) 142, 636, 825, 1132
Van91I CCANNNNNTGG 1 cut(s) 139
VpaK11BI GGWCC 4 cut(s) 153, 551, 943, 1139
XagI CCTNNNNNAGG 1 cut(s) 1155
XceI RCATGY 2 cut(s) 650, 1404
XmnI GAANNNNTTC 1 cut(s) 738
XspI CTAG 2 cut(s) 359, 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.