RchiOBHm_Chr2g0098421

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
10808712 .. 10812280
3569 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2127 bp
ATGGGCTGTGTTGTGTCAAAGAAAAAGGGCGAGGGGGACGACGTCGTTTGGCTCTGCAAAGAGAGGAAGGGGCAGCTGAAACTGGCTGTGGAGAGAAGGTATGCTTTTGCAGAAGCACAATGCAAGTACAATCACTCACTCTACTCAGTAGCAGCTGCCATAAGGATGTTTGTAGCAAGACATTCCTCACCATCTTCACCATTTCTGATCACATTTCCTTCTGTGAATCTTGAAAATGCTGAGCCCATTGTCCAAAACAACCCCATGTTGCTTCAGCAGAGGCCATCTGAGCCCACCACCCACAAAGCCATTGCTGCTGGCCCAGTTTCTGAATCTGCAAAATTACAAGAAAACCCAGATGGTGAGAGTGAGGAGGGGGAAGTGGTGTGTGAGCATTTTTATGATGGGGTGGAGGCAGCAATGGAGTCACCAGAGAGGACATTTGGGTGGGATTTCTTTAATCCTTTCTATGATGGTGTGAGGTCAGAAGTGGTAAATGGGTTTGGGCAGAGTTTTGATGAGGACTTGAGGGCTGTGAGAGAGAAAGAAGGGATTCCTGAGTTGGAAGATGTGGGTGAAGGAGTAATGAGTGAGGGAAAGGTTGGGGATTTGAGTAATTGTGATGTGGGTCATGAGGAGGAGAGTGGAATTGAGGCTGTGAGTGATGCTGATGTGAGCCAAGAAGAGCAAAAAAGTCTGAGCGTGATTGATACACCCAAAGAGGGGAGGGAGTTGTTGGATGCTTTGAGAGATGTTGAGGACCATTTCATGAAGGCCTATGATTCTGGTTTGGATGTTTCAAGGATGCTAGAGACTAACATGGTTCAGATGCAATCTGCATTGGAGGAGATTAAAGAGAACTCAACTAAGCTCATCCGTTCAATCACACGGAGTCGCTCCACCTCATCCACATTATCTTGGTCTTCCTCTGGCAAAAGTCTGCTTACATCTAGTTCCAAAAGTTCTTCAACTTACACTCAGTACAGCAATGATCTCTTTGATGACTATGGAGCAATGGGATCCGGGAACCATTCTTTGACATTAGGAAGGTTATATGCTTGGGAGAAGAAGCTATTTCAGGAGGTGAAGGCTGGAGAGGAAACCAGGAGAACTTATGAGCGAAAATGCTCCCATTTGAGAAACCAAGATATTAGAGGAGATGGCCTTGACAGTAGGGACAAAGTTGGAGTTGAAGTAAAGGACTTGTATGCCAGAATTTTGGTTGCCATAAGAAGTGCTGAATCAATATCACAAAGAATCGAAAAACTGAGAGATGAAGAGCTGCAGCCACAACTTATCGAGCTGCTAAAGGGCTTAATGAGAAATTGGCAGATAATGTCGGAATTGCATGAAACTCAAAACAAAATCATGTCTGAAGTGAGATCGCTCAACTGCCCCACCATTGGAATGTTCTGCAATGACTCGCACCAGCTTGCTACTTTCAAGCTTGAAGCTGAAATTCAAAACTGGCGTGCTTGCTTTGCATCATACTTTTCTTCCCAGAAGGGGTACATTGAAGCTCTTCATGGTTGGCTGTTAAAGTTTGTTGCCCCTGAAACTGAATTCTACTTGAAGGGCATGTCTCCACTTCCATCGTGTACACTCAACGGGCCACCATTACTTGCAATCTGTCATAACTGGTTAACTTTTATGGATAAACTGCCAGATAGGGCAGTGACTAGTGCCATGAAAAGCTTTGGGAAAGATGTCAGAGCCCTGTTGGTTCAACAAGGGGAGGAGCACCAACAAAAGAGGAAGGTCGATGGACTCGCCAGAGAACTTGATAAGAAGGTTTTGGCATTTGAAAGGACAGAGAGAAGGCTTCTTGGATTGAAGTTTTCTGAGAAAGAAACAGAACTGCATGTGCCAAATCGAATTGAGTATTTGACTGGGATGAAGGATCAGCTGGATATGTTTAGGAAGAAGCTAGACACTGAGAAGGCAAAACATCAAACCAGCATGCAGGAGACACAGCACATTGCAGTGAATGGATTTCAGACGGGGTTTACTTCAGTTTTTGAATCCTTAGCCGAGTTTTCGAAGACTGCTACAAAATTGTACGCTGACATTATAACTTTCAGCGAAAATGCAAAGGGGGTAGATGACAAAAGTAGCAACCCTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

708

Amino Acids

79.76

Weight (kDa)

5.34

Isoelectric Point (pI)

51.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 61 1.3e-17 Protein of unknown function (DUF630)
DUF632 PF04782 245 - 571 1.1e-104 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2072
AatII GACGTC 1 cut(s) 45
AclWI GGATC 3 cut(s) 1014, 1027, 1908
AcsI RAATTY 3 cut(s) 1215, 1458, 1562
AcuI CTGAAG 3 cut(s) 257, 1395, 1995
AcyI GRCGYC 1 cut(s) 42
AfaI GTAC 5 cut(s) 128, 983, 1511, 1600, 2060
AfiI CCNNNNNNNGG 4 cut(s) 722, 723, 1403, 1506
AhlI ACTAGT 1 cut(s) 1679
AjnI CCWGG 1 cut(s) 1103
Alw21I GWGCWC 1 cut(s) 1743
Alw26I GTCTC 3 cut(s) 806, 1587, 1961
AlwI GGATC 3 cut(s) 1014, 1027, 1908
AlwNI CAGNNNCTG 1 cut(s) 329
AoxI GGCC 5 cut(s) 281, 319, 774, 1162, 1610
ApeKI GCWGC 8 cut(s) 73, 152, 155, 314, 416, 1282, 1285, 1303
ApoI RAATTY 3 cut(s) 1215, 1458, 1562
Asp700I GAANNNNTTC 2 cut(s) 552, 1521
AspS9I GGNCC 3 cut(s) 320, 760, 1610
AsuC2I CCSGG 1 cut(s) 1024
AsuHPI GGTGA 6 cut(s) 180, 189, 374, 420, 587, 1096
AsuII TTCGAA 1 cut(s) 2039
AvaII GGWCC 1 cut(s) 760
BamHI GGATCC 1 cut(s) 1019
BanII GRGCYC 3 cut(s) 246, 294, 1717
BarI GAAGNNNNNNTAC 1 cut(s) 2104
BbsI GAAGAC 2 cut(s) 915, 2048
Bbv12I GWGCWC 1 cut(s) 1743
BbvI GCAGC 8 cut(s) 85, 142, 164, 301, 428, 1269, 1290, 1297
BccI CCATC 8 cut(s) 199, 292, 353, 398, 467, 1154, 1600, 1757
BciT130I CCWGG 1 cut(s) 1105
BclI TGATCA 1 cut(s) 207
BcnI CCSGG 1 cut(s) 1024
BcoDI GTCTC 3 cut(s) 806, 1587, 1961
BcuI ACTAGT 1 cut(s) 1679
BfaI CTAG 4 cut(s) 809, 951, 1680, 1928
BfmI CTRYAG 1 cut(s) 1283
BisI GCNGC 8 cut(s) 74, 153, 156, 315, 417, 1283, 1286, 1304
BlpI GCTNAGC 1 cut(s) 240
BlsI GCNGC 8 cut(s) 75, 154, 157, 316, 418, 1284, 1287, 1305
Bme1390I CCNGG 2 cut(s) 1024, 1105
Bme18I GGWCC 1 cut(s) 760
BmgT120I GGNCC 3 cut(s) 320, 760, 1610
BmiI GGNNCC 2 cut(s) 1021, 1028
BmrFI CCNGG 2 cut(s) 1024, 1105
BmrI ACTGGG 2 cut(s) 317, 1899
BmsI GCATC 5 cut(s) 655, 730, 795, 819, 1493
BmuI ACTGGG 2 cut(s) 317, 1899
BpiI GAAGAC 2 cut(s) 915, 2048
BpmI CTGGAG 1 cut(s) 1113
Bpu10I CCTNAGC 1 cut(s) 2026
Bpu1102I GCTNAGC 1 cut(s) 240
Bpu14I TTCGAA 1 cut(s) 2039
BpuEI CTTGAG 1 cut(s) 547
BpuMI CCSGG 1 cut(s) 1024
BsaHI GRCGYC 1 cut(s) 42
BsaXI ACNNNNNCTCC 4 cut(s) 83, 113, 1179, 1209
Bsc4I CCNNNNNNNGG 4 cut(s) 722, 723, 1403, 1506
Bse1I ACTGG 5 cut(s) 87, 323, 1472, 1643, 1894
Bse3DI GCAATG 6 cut(s) 309, 426, 994, 1020, 1423, 1977
BseBI CCWGG 1 cut(s) 1105
BseGI GGATG 7 cut(s) 171, 745, 799, 810, 873, 905, 1899
BseLI CCNNNNNNNGG 4 cut(s) 722, 723, 1403, 1506
BseMI GCAATG 6 cut(s) 309, 426, 994, 1020, 1423, 1977
BseMII CTCAG 9 cut(s) 159, 231, 279, 549, 689, 992, 1259, 1833, 1926
BseNI ACTGG 5 cut(s) 87, 323, 1472, 1643, 1894
BseRI GAGGAG 6 cut(s) 386, 650, 653, 860, 1170, 1751
BseXI GCAGC 8 cut(s) 85, 142, 164, 301, 428, 1269, 1290, 1297
BshFI GGCC 5 cut(s) 283, 321, 776, 1164, 1612
BsiHKAI GWGCWC 1 cut(s) 1743
BsiSI CCGG 1 cut(s) 1023
BslFI GGGAC 2 cut(s) 50, 1190
BslI CCNNNNNNNGG 4 cut(s) 722, 723, 1403, 1506
BsmAI GTCTC 3 cut(s) 806, 1587, 1961
BsmFI GGGAC 2 cut(s) 50, 1190
BsnI GGCC 5 cut(s) 283, 321, 776, 1164, 1612
Bsp119I TTCGAA 1 cut(s) 2039
Bsp1286I GDGCHC 4 cut(s) 246, 294, 1717, 1743
Bsp1407I TGTACA 1 cut(s) 1598
Bsp143I GATC 5 cut(s) 207, 991, 1019, 1382, 1900
Bsp1720I GCTNAGC 1 cut(s) 240
BspANI GGCC 5 cut(s) 283, 321, 776, 1164, 1612
BspCNI CTCAG 9 cut(s) 158, 232, 280, 550, 690, 991, 1260, 1834, 1927
BspHI TCATGA 2 cut(s) 631, 768
BspLI GGNNCC 2 cut(s) 1021, 1028
BspMAI CTGCAG 1 cut(s) 1287
BspPI GGATC 3 cut(s) 1014, 1027, 1908
BspQI GCTCTTC 3 cut(s) 678, 1272, 1527
BspT104I TTCGAA 1 cut(s) 2039
BsrDI GCAATG 6 cut(s) 309, 426, 994, 1020, 1423, 1977
BsrGI TGTACA 1 cut(s) 1598
BsrI ACTGG 5 cut(s) 87, 323, 1472, 1643, 1894
BssMI GATC 5 cut(s) 207, 991, 1019, 1382, 1900
BssNI GRCGYC 1 cut(s) 42
Bst2UI CCWGG 1 cut(s) 1105
Bst4CI ACNGT 1 cut(s) 1172
Bst6I CTCTTC 3 cut(s) 678, 1272, 1527
BstACI GRCGYC 1 cut(s) 42
BstAUI TGTACA 1 cut(s) 1598
BstBI TTCGAA 1 cut(s) 2039
BstC8I GCNNGC 5 cut(s) 319, 1434, 1473, 1477, 1961
BstF5I GGATG 7 cut(s) 171, 745, 799, 810, 873, 905, 1899
BstKTI GATC 5 cut(s) 210, 994, 1022, 1385, 1903
BstMAI GTCTC 3 cut(s) 806, 1587, 1961
BstMBI GATC 5 cut(s) 207, 991, 1019, 1382, 1900
BstMWI GCNNNNNNNGC 3 cut(s) 289, 314, 1481
BstNI CCWGG 1 cut(s) 1105
BstNSI RCATGY 3 cut(s) 1582, 1865, 1963
BstSCI CCNGG 2 cut(s) 1022, 1103
BstSFI CTRYAG 1 cut(s) 1283
BstV1I GCAGC 8 cut(s) 85, 142, 164, 301, 428, 1269, 1290, 1297
BstV2I GAAGAC 2 cut(s) 915, 2048
BstX2I RGATCY 1 cut(s) 1019
BstXI CCANNNNNNTGG 1 cut(s) 1219
BstYI RGATCY 1 cut(s) 1019
BsuRI GGCC 5 cut(s) 283, 321, 776, 1164, 1612
BtsCI GGATG 7 cut(s) 171, 745, 799, 810, 873, 905, 1899
BtsI GCAGTG 2 cut(s) 1680, 1989
BtsIMutI CAGTG 3 cut(s) 1680, 1932, 1989
Cac8I GCNNGC 5 cut(s) 319, 1434, 1473, 1477, 1961
CaiI CAGNNNCTG 1 cut(s) 329
CciI TCATGA 2 cut(s) 631, 768
Cfr13I GGNCC 3 cut(s) 320, 760, 1610
Csp6I GTAC 5 cut(s) 127, 982, 1510, 1599, 2059
CviQI GTAC 5 cut(s) 127, 982, 1510, 1599, 2059
DpnI GATC 5 cut(s) 209, 993, 1021, 1384, 1902
DpnII GATC 5 cut(s) 207, 991, 1019, 1382, 1900
Eam1104I CTCTTC 3 cut(s) 678, 1272, 1527
EarI CTCTTC 3 cut(s) 678, 1272, 1527
Eco147I AGGCCT 1 cut(s) 776
Eco24I GRGCYC 3 cut(s) 246, 294, 1717
Eco47I GGWCC 1 cut(s) 760
Eco57I CTGAAG 3 cut(s) 257, 1395, 1995
EcoRI GAATTC 1 cut(s) 1562
EcoRII CCWGG 1 cut(s) 1103
EcoT38I GRGCYC 3 cut(s) 246, 294, 1717
FalI AAGNNNNNCTT 2 cut(s) 88, 120
FaqI GGGAC 2 cut(s) 50, 1190
FbaI TGATCA 1 cut(s) 207
Fnu4HI GCNGC 8 cut(s) 74, 153, 156, 315, 417, 1283, 1286, 1304
FokI GGATG 7 cut(s) 178, 752, 806, 817, 860, 892, 1906
FriOI GRGCYC 3 cut(s) 246, 294, 1717
Fsp4HI GCNGC 8 cut(s) 74, 153, 156, 315, 417, 1283, 1286, 1304
FspBI CTAG 4 cut(s) 809, 951, 1680, 1928
GluI GCNGC 8 cut(s) 74, 153, 156, 315, 417, 1283, 1286, 1304
GsuI CTGGAG 1 cut(s) 1113
HaeIII GGCC 5 cut(s) 283, 321, 776, 1164, 1612
HapII CCGG 1 cut(s) 1023
Hin1I GRCGYC 1 cut(s) 42
HincII GTYRAC 1 cut(s) 1644
HindII GTYRAC 1 cut(s) 1644
HindIII AAGCTT 2 cut(s) 1445, 1693
HpaI GTTAAC 1 cut(s) 1644
HpaII CCGG 1 cut(s) 1023
HphI GGTGA 6 cut(s) 180, 189, 374, 420, 587, 1096
Hpy166II GTNNAC 4 cut(s) 1599, 1601, 1644, 2007
Hpy188III TCNNGA 6 cut(s) 230, 557, 632, 769, 1079, 2124
Hpy8I GTNNAC 4 cut(s) 1599, 1601, 1644, 2007
Hpy99I CGWCG 2 cut(s) 44, 47
HpyCH4III ACNGT 1 cut(s) 1172
HpyCH4IV ACGT 1 cut(s) 42
HpyF10VI GCNNNNNNNGC 3 cut(s) 289, 314, 1481
HpySE526I ACGT 1 cut(s) 42
Hsp92I GRCGYC 1 cut(s) 42
Ksp22I TGATCA 1 cut(s) 207
KspAI GTTAAC 1 cut(s) 1644
Kzo9I GATC 5 cut(s) 207, 991, 1019, 1382, 1900
LguI GCTCTTC 3 cut(s) 678, 1272, 1527
LmnI GCTCC 4 cut(s) 902, 1010, 1133, 1738
Lsp1109I GCAGC 8 cut(s) 85, 142, 164, 301, 428, 1269, 1290, 1297
LweI GCATC 5 cut(s) 655, 730, 795, 819, 1493
MaeI CTAG 4 cut(s) 809, 951, 1680, 1928
MaeII ACGT 1 cut(s) 42
MaeIII GTNAC 2 cut(s) 426, 1675
MalI GATC 5 cut(s) 209, 993, 1021, 1384, 1902
MboI GATC 5 cut(s) 207, 991, 1019, 1382, 1900
MflI RGATCY 1 cut(s) 1019
MhlI GDGCHC 4 cut(s) 246, 294, 1717, 1743
MlyI GAGTC 4 cut(s) 434, 901, 1415, 1761
MmeI TCCRAC 4 cut(s) 543, 717, 1165, 1320
MroXI GAANNNNTTC 2 cut(s) 552, 1521
MseI TTAA 5 cut(s) 459, 852, 1316, 1538, 1643
MslI CAYNNNNRTG 5 cut(s) 164, 399, 445, 1406, 1982
MspA1I CMGCKG 3 cut(s) 76, 155, 1906
MspI CCGG 1 cut(s) 1023
MspR9I CCNGG 2 cut(s) 1024, 1105
MvaI CCWGG 1 cut(s) 1105
MwoI GCNNNNNNNGC 3 cut(s) 289, 314, 1481
NciI CCSGG 1 cut(s) 1024
NdeII GATC 5 cut(s) 207, 991, 1019, 1382, 1900
NlaIV GGNNCC 2 cut(s) 1021, 1028
NmeAIII GCCGAG 1 cut(s) 2056
NmuCI GTSAC 2 cut(s) 426, 1675
NspI RCATGY 3 cut(s) 1582, 1865, 1963
NspV TTCGAA 1 cut(s) 2039
PaeI GCATGC 1 cut(s) 1963
PagI TCATGA 2 cut(s) 631, 768
PceI AGGCCT 1 cut(s) 776
PciSI GCTCTTC 3 cut(s) 678, 1272, 1527
PdmI GAANNNNTTC 2 cut(s) 552, 1521
PfeI GAWTC 7 cut(s) 226, 332, 553, 782, 1241, 1257, 2021
PflFI GACNNNGTC 1 cut(s) 41
PfoI TCCNGGA 1 cut(s) 1022
PkrI GCNGC 8 cut(s) 75, 154, 157, 316, 418, 1284, 1287, 1305
PleI GAGTC 4 cut(s) 433, 900, 1415, 1761
PpsI GAGTC 4 cut(s) 433, 900, 1415, 1761
PsiI TTATAA 1 cut(s) 2072
Psp6I CCWGG 1 cut(s) 1103
PspGI CCWGG 1 cut(s) 1103
PspN4I GGNNCC 2 cut(s) 1021, 1028
PspPI GGNCC 3 cut(s) 320, 760, 1610
PstI CTGCAG 1 cut(s) 1287
PstNI CAGNNNCTG 1 cut(s) 329
PsuI RGATCY 1 cut(s) 1019
PsyI GACNNNGTC 1 cut(s) 41
PvuII CAGCTG 3 cut(s) 76, 155, 1906
RsaI GTAC 5 cut(s) 128, 983, 1511, 1600, 2060
RsaNI GTAC 5 cut(s) 127, 982, 1510, 1599, 2059
RseI CAYNNNNRTG 5 cut(s) 164, 399, 445, 1406, 1982
SapI GCTCTTC 3 cut(s) 678, 1272, 1527
SaqAI TTAA 5 cut(s) 459, 852, 1316, 1538, 1643
SatI GCNGC 8 cut(s) 74, 153, 156, 315, 417, 1283, 1286, 1304
Sau3AI GATC 5 cut(s) 207, 991, 1019, 1382, 1900
Sau96I GGNCC 3 cut(s) 320, 760, 1610
SchI GAGTC 4 cut(s) 434, 901, 1415, 1761
ScrFI CCNGG 2 cut(s) 1024, 1105
SduI GDGCHC 4 cut(s) 246, 294, 1717, 1743
SfaNI GCATC 5 cut(s) 655, 730, 795, 819, 1493
SfcI CTRYAG 1 cut(s) 1283
SfuI TTCGAA 1 cut(s) 2039
SinI GGWCC 1 cut(s) 760
SmiMI CAYNNNNRTG 5 cut(s) 164, 399, 445, 1406, 1982
SmlI CTYRAG 1 cut(s) 526
SmoI CTYRAG 1 cut(s) 526
SpeI ACTAGT 1 cut(s) 1679
SphI GCATGC 1 cut(s) 1963
SseBI AGGCCT 1 cut(s) 776
SspMI CTAG 4 cut(s) 809, 951, 1680, 1928
StuI AGGCCT 1 cut(s) 776
StyD4I CCNGG 2 cut(s) 1022, 1103
TaaI ACNGT 1 cut(s) 1172
TaiI ACGT 1 cut(s) 45
TaqI TCGA 5 cut(s) 1260, 1299, 1761, 1873, 2039
TatI WGTACW 3 cut(s) 126, 981, 1598
TfiI GAWTC 7 cut(s) 226, 332, 553, 782, 1241, 1257, 2021
Tru1I TTAA 5 cut(s) 459, 852, 1316, 1538, 1643
Tru9I TTAA 5 cut(s) 459, 852, 1316, 1538, 1643
TscAI CASTG 3 cut(s) 1680, 1939, 1989
TseFI GTSAC 2 cut(s) 426, 1675
TseI GCWGC 8 cut(s) 73, 152, 155, 314, 416, 1282, 1285, 1303
Tsp45I GTSAC 2 cut(s) 426, 1675
TspDTI ATGAA 7 cut(s) 757, 785, 1290, 1365, 1514, 1703, 1910
TspGWI ACGGA 2 cut(s) 866, 904
TspRI CASTG 3 cut(s) 1680, 1939, 1989
Tth111I GACNNNGTC 1 cut(s) 41
VpaK11BI GGWCC 1 cut(s) 760
XapI RAATTY 3 cut(s) 1215, 1458, 1562
XceI RCATGY 3 cut(s) 1582, 1865, 1963
XmnI GAANNNNTTC 2 cut(s) 552, 1521
XspI CTAG 4 cut(s) 809, 951, 1680, 1928
ZraI GACGTC 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.