ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g03570 |
| rosa_chinensis | RchiOBHm_Chr1g0330711 |
| rosa_multiflora | Rmu_sc0002725.1_g000018 Rmu_sc0004826.1_g000001 Rmu_sc0012388.1_g000004 Rmu_sc0032321.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00084840 Rroxscaffold_2G00084850 |
| rosa_rugosa | Rorug02G0523300 |
| rosa_samantha | Rh1AG108100 Rh1AG109100 Rh1AG109300 Rh1AG110400 Rh1AG111300 Rh1CG104100 Rh1CG105000 Rh1CG105200 Rh1CG106700 Rh1DG114200 Rh1DG114800 Rh1DG115700 Rh2BG601800 Rh2CG572500 Rh2DG612200 |
| rosa_wichuraiana | Rw4G012620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 164 |
| AluBI | AGCT | 2 cut(s) | 59, 97 |
| AluI | AGCT | 2 cut(s) | 59, 97 |
| Alw21I | GWGCWC | 1 cut(s) | 99 |
| ApeKI | GCWGC | 2 cut(s) | 59, 89 |
| BanII | GRGCYC | 1 cut(s) | 99 |
| Bbv12I | GWGCWC | 1 cut(s) | 99 |
| BbvI | GCAGC | 2 cut(s) | 46, 76 |
| BccI | CCATC | 1 cut(s) | 29 |
| BisI | GCNGC | 2 cut(s) | 60, 90 |
| BlpI | GCTNAGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 2 cut(s) | 61, 91 |
| BoxI | GACNNNNGTC | 1 cut(s) | 81 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 93 |
| BseMII | CTCAG | 4 cut(s) | 84, 135, 150, 210 |
| BseXI | GCAGC | 2 cut(s) | 46, 76 |
| BsiHKAI | GWGCWC | 1 cut(s) | 99 |
| BslFI | GGGAC | 1 cut(s) | 103 |
| BsmFI | GGGAC | 1 cut(s) | 103 |
| Bsp1286I | GDGCHC | 1 cut(s) | 99 |
| Bsp143I | GATC | 2 cut(s) | 14, 205 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 93 |
| BspCNI | CTCAG | 4 cut(s) | 85, 136, 151, 211 |
| BssMI | GATC | 2 cut(s) | 14, 205 |
| Bst6I | CTCTTC | 1 cut(s) | 21 |
| BstDEI | CTNAG | 6 cut(s) | 80, 93, 133, 144, 159, 219 |
| BstKTI | GATC | 2 cut(s) | 17, 208 |
| BstMBI | GATC | 2 cut(s) | 14, 205 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 68 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 81 |
| BstV1I | GCAGC | 2 cut(s) | 46, 76 |
| BtsIMutI | CAGTG | 1 cut(s) | 201 |
| Csp6I | GTAC | 1 cut(s) | 163 |
| CviJI | RGCY | 3 cut(s) | 59, 97, 143 |
| CviKI_1 | RGCY | 3 cut(s) | 59, 97, 143 |
| CviQI | GTAC | 1 cut(s) | 163 |
| DdeI | CTNAG | 6 cut(s) | 80, 93, 133, 144, 159, 219 |
| DpnI | GATC | 2 cut(s) | 16, 207 |
| DpnII | GATC | 2 cut(s) | 14, 205 |
| Eam1104I | CTCTTC | 1 cut(s) | 21 |
| EarI | CTCTTC | 1 cut(s) | 21 |
| Ecl136II | GAGCTC | 1 cut(s) | 97 |
| Eco24I | GRGCYC | 1 cut(s) | 99 |
| Eco53kI | GAGCTC | 1 cut(s) | 97 |
| EcoICRI | GAGCTC | 1 cut(s) | 97 |
| EcoT38I | GRGCYC | 1 cut(s) | 99 |
| FaiI | YATR | 4 cut(s) | 53, 73, 75, 105 |
| FaqI | GGGAC | 1 cut(s) | 103 |
| FauNDI | CATATG | 1 cut(s) | 73 |
| Fnu4HI | GCNGC | 2 cut(s) | 60, 90 |
| FriOI | GRGCYC | 1 cut(s) | 99 |
| Fsp4HI | GCNGC | 2 cut(s) | 60, 90 |
| GluI | GCNGC | 2 cut(s) | 60, 90 |
| HinfI | GANTC | 1 cut(s) | 4 |
| Hpy166II | GTNNAC | 2 cut(s) | 43, 229 |
| Hpy188I | TCNGA | 1 cut(s) | 160 |
| Hpy188III | TCNNGA | 2 cut(s) | 174, 209 |
| Hpy8I | GTNNAC | 2 cut(s) | 43, 229 |
| HpyCH4V | TGCA | 1 cut(s) | 124 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 68 |
| HpyF3I | CTNAG | 6 cut(s) | 80, 93, 133, 144, 159, 219 |
| Kzo9I | GATC | 2 cut(s) | 14, 205 |
| LpnPI | CCDG | 2 cut(s) | 134, 159 |
| Lsp1109I | GCAGC | 2 cut(s) | 46, 76 |
| MaeIII | GTNAC | 1 cut(s) | 199 |
| MalI | GATC | 2 cut(s) | 16, 207 |
| MboI | GATC | 2 cut(s) | 14, 205 |
| MboII | GAAGA | 3 cut(s) | 38, 59, 206 |
| MhlI | GDGCHC | 1 cut(s) | 99 |
| MluCI | AATT | 1 cut(s) | 18 |
| MnlI | CCTC | 1 cut(s) | 133 |
| MseI | TTAA | 1 cut(s) | 21 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 68 |
| NdeI | CATATG | 1 cut(s) | 73 |
| NdeII | GATC | 2 cut(s) | 14, 205 |
| NmuCI | GTSAC | 1 cut(s) | 199 |
| PkrI | GCNGC | 2 cut(s) | 61, 91 |
| PshAI | GACNNNNGTC | 1 cut(s) | 81 |
| Psp124BI | GAGCTC | 1 cut(s) | 99 |
| RsaI | GTAC | 1 cut(s) | 164 |
| RsaNI | GTAC | 1 cut(s) | 163 |
| SacI | GAGCTC | 1 cut(s) | 99 |
| SaqAI | TTAA | 1 cut(s) | 21 |
| SatI | GCNGC | 2 cut(s) | 60, 90 |
| Sau3AI | GATC | 2 cut(s) | 14, 205 |
| SduI | GDGCHC | 1 cut(s) | 99 |
| SetI | ASST | 4 cut(s) | 61, 81, 99, 156 |
| SgeI | CNNG | 6 cut(s) | 18, 98, 133, 186, 203, 221 |
| Sse9I | AATT | 1 cut(s) | 18 |
| SspI | AATATT | 1 cut(s) | 182 |
| SstI | GAGCTC | 1 cut(s) | 99 |
| TaqI | TCGA | 1 cut(s) | 7 |
| TasI | AATT | 1 cut(s) | 18 |
| Tru1I | TTAA | 1 cut(s) | 21 |
| Tru9I | TTAA | 1 cut(s) | 21 |
| TscAI | CASTG | 1 cut(s) | 208 |
| TseFI | GTSAC | 1 cut(s) | 199 |
| TseI | GCWGC | 2 cut(s) | 59, 89 |
| Tsp45I | GTSAC | 1 cut(s) | 199 |
| TspRI | CASTG | 1 cut(s) | 208 |