Belongs to the ClpA ClpB family
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g03570 |
| rosa_chinensis | RchiOBHm_Chr1g0330711 |
| rosa_multiflora | Rmu_sc0002725.1_g000018 Rmu_sc0004826.1_g000001 Rmu_sc0012388.1_g000004 Rmu_sc0032321.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00084840 Rroxscaffold_2G00084850 |
| rosa_rugosa | Rorug02G0523300 |
| rosa_samantha | Rh1AG108100 Rh1AG109100 Rh1AG109300 Rh1AG110400 Rh1AG111300 Rh1CG104100 Rh1CG105000 Rh1CG105200 Rh1CG106700 Rh1DG114200 Rh1DG114800 Rh1DG115700 Rh2BG601800 Rh2CG572500 Rh2DG612200 |
| rosa_wichuraiana | Rw4G012620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 207 |
| AfaI | GTAC | 1 cut(s) | 50 |
| AjnI | CCWGG | 1 cut(s) | 216 |
| AluBI | AGCT | 4 cut(s) | 151, 170, 178, 245 |
| AluI | AGCT | 4 cut(s) | 151, 170, 178, 245 |
| AlwI | GGATC | 1 cut(s) | 207 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 245 |
| AoxI | GGCC | 1 cut(s) | 219 |
| ApeKI | GCWGC | 1 cut(s) | 242 |
| AsuC2I | CCSGG | 1 cut(s) | 116 |
| AsuHPI | GGTGA | 1 cut(s) | 142 |
| BciT130I | CCWGG | 1 cut(s) | 218 |
| BcnI | CCSGG | 1 cut(s) | 116 |
| BisI | GCNGC | 1 cut(s) | 243 |
| BlsI | GCNGC | 1 cut(s) | 244 |
| Bme1390I | CCNGG | 2 cut(s) | 116, 218 |
| BmiI | GGNNCC | 1 cut(s) | 215 |
| BmrFI | CCNGG | 2 cut(s) | 116, 218 |
| BpuMI | CCSGG | 1 cut(s) | 116 |
| Bse1I | ACTGG | 1 cut(s) | 222 |
| BseBI | CCWGG | 1 cut(s) | 218 |
| BseMII | CTCAG | 3 cut(s) | 21, 36, 96 |
| BseNI | ACTGG | 1 cut(s) | 222 |
| BshFI | GGCC | 1 cut(s) | 221 |
| BsiSI | CCGG | 1 cut(s) | 115 |
| BsnI | GGCC | 1 cut(s) | 221 |
| Bsp143I | GATC | 2 cut(s) | 91, 199 |
| BspANI | GGCC | 1 cut(s) | 221 |
| BspCNI | CTCAG | 3 cut(s) | 22, 37, 97 |
| BspLI | GGNNCC | 1 cut(s) | 215 |
| BspPI | GGATC | 1 cut(s) | 207 |
| BsrI | ACTGG | 1 cut(s) | 222 |
| BssMI | GATC | 2 cut(s) | 91, 199 |
| Bst2UI | CCWGG | 1 cut(s) | 218 |
| Bst6I | CTCTTC | 1 cut(s) | 75 |
| BstDEI | CTNAG | 4 cut(s) | 19, 30, 45, 105 |
| BstKTI | GATC | 2 cut(s) | 94, 202 |
| BstMBI | GATC | 2 cut(s) | 91, 199 |
| BstNI | CCWGG | 1 cut(s) | 218 |
| BstSCI | CCNGG | 2 cut(s) | 114, 216 |
| BstX2I | RGATCY | 1 cut(s) | 199 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 59 |
| BstYI | RGATCY | 1 cut(s) | 199 |
| BsuRI | GGCC | 1 cut(s) | 221 |
| BtsIMutI | CAGTG | 1 cut(s) | 87 |
| CaiI | CAGNNNCTG | 1 cut(s) | 245 |
| Csp6I | GTAC | 1 cut(s) | 49 |
| CviJI | RGCY | 7 cut(s) | 29, 151, 170, 178, 216, 221, 245 |
| CviKI_1 | RGCY | 7 cut(s) | 29, 151, 170, 178, 216, 221, 245 |
| CviQI | GTAC | 1 cut(s) | 49 |
| DdeI | CTNAG | 4 cut(s) | 19, 30, 45, 105 |
| DpnI | GATC | 2 cut(s) | 93, 201 |
| DpnII | GATC | 2 cut(s) | 91, 199 |
| Eam1104I | CTCTTC | 1 cut(s) | 75 |
| EarI | CTCTTC | 1 cut(s) | 75 |
| EcoRII | CCWGG | 1 cut(s) | 216 |
| FaiI | YATR | 1 cut(s) | 159 |
| Fnu4HI | GCNGC | 1 cut(s) | 243 |
| Fsp4HI | GCNGC | 1 cut(s) | 243 |
| GluI | GCNGC | 1 cut(s) | 243 |
| HaeIII | GGCC | 1 cut(s) | 221 |
| HapII | CCGG | 1 cut(s) | 115 |
| HpaII | CCGG | 1 cut(s) | 115 |
| HphI | GGTGA | 1 cut(s) | 142 |
| Hpy188I | TCNGA | 2 cut(s) | 46, 204 |
| Hpy188III | TCNNGA | 3 cut(s) | 60, 95, 227 |
| HpyCH4V | TGCA | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 4 cut(s) | 19, 30, 45, 105 |
| Kzo9I | GATC | 2 cut(s) | 91, 199 |
| LmnI | GCTCC | 2 cut(s) | 175, 213 |
| LpnPI | CCDG | 7 cut(s) | 20, 45, 128, 203, 230, 231, 235 |
| MaeIII | GTNAC | 1 cut(s) | 85 |
| MalI | GATC | 2 cut(s) | 93, 201 |
| MboI | GATC | 2 cut(s) | 91, 199 |
| MboII | GAAGA | 1 cut(s) | 92 |
| MflI | RGATCY | 1 cut(s) | 199 |
| MnlI | CCTC | 3 cut(s) | 19, 76, 223 |
| MspA1I | CMGCKG | 1 cut(s) | 245 |
| MspI | CCGG | 1 cut(s) | 115 |
| MspR9I | CCNGG | 2 cut(s) | 116, 218 |
| MvaI | CCWGG | 1 cut(s) | 218 |
| NciI | CCSGG | 1 cut(s) | 116 |
| NdeII | GATC | 2 cut(s) | 91, 199 |
| NlaIV | GGNNCC | 1 cut(s) | 215 |
| NmuCI | GTSAC | 1 cut(s) | 85 |
| PkrI | GCNGC | 1 cut(s) | 244 |
| Psp6I | CCWGG | 1 cut(s) | 216 |
| PspGI | CCWGG | 1 cut(s) | 216 |
| PspN4I | GGNNCC | 1 cut(s) | 215 |
| PstNI | CAGNNNCTG | 1 cut(s) | 245 |
| PsuI | RGATCY | 1 cut(s) | 199 |
| PvuII | CAGCTG | 1 cut(s) | 245 |
| RsaI | GTAC | 1 cut(s) | 50 |
| RsaNI | GTAC | 1 cut(s) | 49 |
| SatI | GCNGC | 1 cut(s) | 243 |
| Sau3AI | GATC | 2 cut(s) | 91, 199 |
| ScrFI | CCNGG | 2 cut(s) | 116, 218 |
| SetI | ASST | 6 cut(s) | 42, 87, 153, 172, 180, 247 |
| StyD4I | CCNGG | 2 cut(s) | 114, 216 |
| TaqI | TCGA | 1 cut(s) | 147 |
| TscAI | CASTG | 1 cut(s) | 94 |
| TseFI | GTSAC | 1 cut(s) | 85 |
| TseI | GCWGC | 1 cut(s) | 242 |
| Tsp45I | GTSAC | 1 cut(s) | 85 |
| TspDTI | ATGAA | 2 cut(s) | 125, 143 |
| TspRI | CASTG | 1 cut(s) | 94 |