Belongs to the ClpA ClpB family
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g03570 |
| rosa_chinensis | RchiOBHm_Chr1g0330711 |
| rosa_multiflora | Rmu_sc0002725.1_g000018 Rmu_sc0004826.1_g000001 Rmu_sc0012388.1_g000004 Rmu_sc0032321.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00084840 Rroxscaffold_2G00084850 |
| rosa_rugosa | Rorug02G0523300 |
| rosa_samantha | Rh1AG108100 Rh1AG109100 Rh1AG109300 Rh1AG110400 Rh1AG111300 Rh1CG104100 Rh1CG105000 Rh1CG105200 Rh1CG106700 Rh1DG114200 Rh1DG114800 Rh1DG115700 Rh2BG601800 Rh2CG572500 Rh2DG612200 |
| rosa_wichuraiana | Rw4G012620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 164 |
| Acc36I | ACCTGC | 1 cut(s) | 164 |
| AciI | CCGC | 1 cut(s) | 110 |
| AsuHPI | GGTGA | 1 cut(s) | 49 |
| BbsI | GAAGAC | 1 cut(s) | 18 |
| BceAI | ACGGC | 1 cut(s) | 45 |
| BfuAI | ACCTGC | 1 cut(s) | 164 |
| BisI | GCNGC | 1 cut(s) | 110 |
| BlsI | GCNGC | 1 cut(s) | 111 |
| BmsI | GCATC | 1 cut(s) | 108 |
| BpiI | GAAGAC | 1 cut(s) | 18 |
| BpmI | CTGGAG | 1 cut(s) | 167 |
| Bse1I | ACTGG | 1 cut(s) | 150 |
| Bse3DI | GCAATG | 1 cut(s) | 121 |
| BseGI | GGATG | 1 cut(s) | 123 |
| BseMI | GCAATG | 1 cut(s) | 121 |
| BseNI | ACTGG | 1 cut(s) | 150 |
| Bsp143I | GATC | 1 cut(s) | 150 |
| BspACI | CCGC | 1 cut(s) | 110 |
| BspMI | ACCTGC | 1 cut(s) | 164 |
| BsrDI | GCAATG | 1 cut(s) | 121 |
| BsrI | ACTGG | 1 cut(s) | 150 |
| BssMI | GATC | 1 cut(s) | 150 |
| Bst4CI | ACNGT | 1 cut(s) | 17 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 118 |
| BstDEI | CTNAG | 1 cut(s) | 165 |
| BstF5I | GGATG | 1 cut(s) | 123 |
| BstKTI | GATC | 1 cut(s) | 153 |
| BstMBI | GATC | 1 cut(s) | 150 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 118 |
| BstV2I | GAAGAC | 1 cut(s) | 18 |
| BtsCI | GGATG | 1 cut(s) | 123 |
| BveI | ACCTGC | 1 cut(s) | 164 |
| DdeI | CTNAG | 1 cut(s) | 165 |
| DpnI | GATC | 1 cut(s) | 152 |
| DpnII | GATC | 1 cut(s) | 150 |
| EcoT22I | ATGCAT | 1 cut(s) | 123 |
| Fnu4HI | GCNGC | 1 cut(s) | 110 |
| FokI | GGATG | 1 cut(s) | 130 |
| Fsp4HI | GCNGC | 1 cut(s) | 110 |
| GluI | GCNGC | 1 cut(s) | 110 |
| GsuI | CTGGAG | 1 cut(s) | 167 |
| HphI | GGTGA | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 1 cut(s) | 182 |
| Hpy188III | TCNNGA | 1 cut(s) | 38 |
| HpyCH4III | ACNGT | 1 cut(s) | 17 |
| HpyCH4IV | ACGT | 1 cut(s) | 134 |
| HpyCH4V | TGCA | 2 cut(s) | 49, 121 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 118 |
| HpyF3I | CTNAG | 1 cut(s) | 165 |
| HpySE526I | ACGT | 1 cut(s) | 134 |
| Kzo9I | GATC | 1 cut(s) | 150 |
| LmnI | GCTCC | 1 cut(s) | 67 |
| LpnPI | CCDG | 3 cut(s) | 51, 131, 159 |
| LweI | GCATC | 1 cut(s) | 108 |
| MaeII | ACGT | 1 cut(s) | 134 |
| MalI | GATC | 1 cut(s) | 152 |
| MboI | GATC | 1 cut(s) | 150 |
| MboII | GAAGA | 1 cut(s) | 23 |
| MluCI | AATT | 1 cut(s) | 85 |
| MmeI | TCCRAC | 1 cut(s) | 45 |
| MnlI | CCTC | 1 cut(s) | 65 |
| Mph1103I | ATGCAT | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 118 |
| NdeII | GATC | 1 cut(s) | 150 |
| NsiI | ATGCAT | 1 cut(s) | 123 |
| PaqCI | CACCTGC | 1 cut(s) | 164 |
| PkrI | GCNGC | 1 cut(s) | 111 |
| SatI | GCNGC | 1 cut(s) | 110 |
| Sau3AI | GATC | 1 cut(s) | 150 |
| SetI | ASST | 4 cut(s) | 57, 62, 137, 178 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SgeI | CNNG | 5 cut(s) | 40, 50, 73, 125, 158 |
| Sse9I | AATT | 1 cut(s) | 85 |
| SsiI | CCGC | 1 cut(s) | 110 |
| TaaI | ACNGT | 1 cut(s) | 17 |
| TaiI | ACGT | 1 cut(s) | 137 |
| TaqI | TCGA | 1 cut(s) | 9 |
| TasI | AATT | 1 cut(s) | 85 |
| TauI | GCSGC | 1 cut(s) | 112 |
| Zsp2I | ATGCAT | 1 cut(s) | 123 |