Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001963

Physical Location & Seq

Genomic Coordinates Forward (+)

20802955 .. 20806621

Gene Structure 3667 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGGGATGTTTGAGGAAATGGGTTTCTGTGGAAATCTTGATTTCCTTTCAGCTGCTGCTGGCGTAGGTGAGGTGGTTCTAGAGCAAGAACCAGAGGCAACTGTAGAGGAGGATTATAGTGATGAAGAAATGGATGTTGATGAGCTCGAAAGGAGGATGTGGAGAGATCGGATTCTATTGAGGCGGCTTAGAGAACAAAATAAGGGAAAGGAAGGAGCTGACAATGCAAGGCAGCGCCAATCACAGGAACAAGCTCGGAGGAAGAAGATGTCACGGGCACAAGATGGAATCCTGAAATATATGCTGAAAATGATGGAAGTTTGTAAAGCTCAGGGTTTTGTTTATGGGATTATACCTGAAAAAGGAAAACCAGTGAGTGGTGCCTCTGACAATCTTCGAGAATGGTGGAAGGACAAAGTAAGATTTGATCGTAATGGCCCAGCTGCCATTTCCAAATATCAGGCAGATAATTCAATCCCTGGTTTGATGGAAGACTGCATTTCAGTGGCATCCACTCCACACACCCTGCAGGAGCTCCAGGACACCACTCTTGGTTCACTTTTGTCAGCCCTGATGCAGCACTGTGACCCACCCCAAAGGCGTTTCCCATTGGAGAAGGGTGTTTCCCCACCATGGTGGCCAACTGGTAATGAGGAATGGTGGCCTCAATTGAACTTGGCCAATCAGGGACCTCCCCCATACAAGAAGCCTCATGATCTGAAGAAGGCATGGAAGGTCAGTGTTCTCACAGCTGTGATAAAGCACATGTCACCTGATATTAACAAGATCCGCAAGCTTGTTCGTCAGTCGAAATGTTTGCAGGACAAAATGACTGCTAAGGAAAGTGCCACATGGCTGGCCATTATACACCAGGAGGAAGTTATGGCCAGGAAGATGTTCCCTGATAAGTGTCCACCTTTATCTGCTGGTGGGAGCGGATCTTTCGTAATCAGTGGTACCAGTGACTATGATGTTGAAGGGGTTGATGATGATGAACAGAATGTTGAAGTTGAGGATTGCAAACCTCTTCTGAATCACTTCAATATGGGAAGTATTGGACAAAGACCTCAGATTAAGGGAGAGCTTATTGAGACCAACTCGGATTTTGGTAAGAAGAGGAAGCAGCAGCAGGCTGAAGAGCCACAAATGATGCTTAATCAGAAGGTTTACACCTGTGAATTCCTGCAATGCCCATATAGTGATTATCGCATTGGGGGCTTTTGTGACATTACTGCTAGAAACAATCATCAGATGAGTTGCCCATACAGGAATAATTTTTCACCAGTGTTTGCAATGCCAAACTTGCTTGACAATGACAAACCTGCAGGCTTCCCTCTACCAGTTGCTCAAGCTAAGCCAGCAGTTATACAACAGGTGAACCAGACAAGCCCTTACAATGTTTCAGGACTTGGACTTGCAGATGATGGGCAGAAAATGATATCCGAGCTTATGTCATCCTATGATAGCAATACTCAGCACAGCCCGAATCCTGGCAACCTCAATGCTGTACAAGACCACAACCACCAGCAGGCAAAATTTCAGTATCCAGTGAATGATAACTTCTATGGTCAAGGGATGGTTATGGATCGTAACAATGTGCCTGAACCAACACCGATGCCCATGCTTCAACAAGTTTTCCCATCGCCTGAAGTTCAGTTTGATCAGTGCAAGGTATTTGATTCTGCCTTTGGTAACAATCCGAATGATGTTATTCCTGACTTGAGATTTGGATCTGGATCTCAGTTTAGCTTGGCATCGCCGGACTATAATGTTGGTAACTCACTGCTGAAGCAAGATGCTGCATCATCGTTTTGGTACATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0000976 GO:0001067 GO:0001666 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009755 GO:0009756 GO:0009873 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010182 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0036293 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071369 GO:0071495 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

EIN3

Protein Analysis

607

Amino Acids

68.43

Weight (kDa)

5.31

Isoelectric Point (pI)

51.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EIN3_DNA-bd	PF04873	47 - 293	1e-128	Ethylene insensitive 3, DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001963)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27050 AT3G20770
fragaria_vesca	FvH4_1g28720 FvH4_1g28720 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940 FvH4_7g04940
malus_domestica	MD02G1266200.v1.1 MD02G1266300.v1.1 MD07G1053500.v1.1 MD07G1053800.v1.1 MD08G1245800.v1.1 MD15G1441000.v1.1
prunus_persica	Prupe.2G058400_v2.0.a1 Prupe.2G058500_v2.0.a1 Prupe.2G070300_v2.0.a1
pyrus_communis	pycom02g22750 pycom02g22760 pycom07g04140 pycom07g04160 pycom08g21330 pycom15g38880
rosa_chinensis	RchiOBHm_Chr1g0331011 RchiOBHm_Chr5g0049961
rosa_laevigata	RLG00000029759 RLG00000034672
rosa_multiflora	Rmu_sc0000333.1_g000038 Rmu_sc0013622.1_g000002 Rmu_sc0013622.1_g000003
rosa_roxburghii	Rroxscaffold_1G00031290 Rroxscaffold_4G00319550
rosa_rugosa	Rorug01G0091600 Rorug05G0255200
rosa_samantha	Rh1AG113300 Rh1BG087200 Rh1CG110200 Rh1DG118900 Rh5AG329100 Rh5BG339600 Rh5CG365600 Rh5DG352200
rosa_wichuraiana	Rw1G009240 Rw5G031070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1330
Acc65I	GGTACC	1 cut(s)	956
AccB1I	GGYRCC	2 cut(s)	380, 956
AccB7I	CCANNNNNTGG	1 cut(s)	377
AccBSI	CCGCTC	1 cut(s)	936
AciI	CCGC	3 cut(s)	184, 790, 936
AclWI	GGATC	5 cut(s)	781, 946, 1593, 1738, 1744
AcoI	YGGCCR	4 cut(s)	638, 678, 858, 885
AcsI	RAATTY	2 cut(s)	1178, 1535
AcuI	CTGAAG	4 cut(s)	740, 1155, 1668, 1808
AfaI	GTAC	3 cut(s)	958, 1509, 1817
AfiI	CCNNNNNNNGG	6 cut(s)	244, 362, 377, 633, 1490, 1528
AflIII	ACRYGT	1 cut(s)	765
AgsI	TTSAA	6 cut(s)	474, 673, 977, 1007, 1042, 1628
AjnI	CCWGG	5 cut(s)	478, 537, 870, 887, 1489
AleI	CACNNNNGTG	2 cut(s)	634, 752
Alw21I	GWGCWC	2 cut(s)	147, 537
Alw26I	GTCTC	1 cut(s)	1085
AlwI	GGATC	5 cut(s)	781, 946, 1593, 1738, 1744
AlwNI	CAGNNNCTG	1 cut(s)	56
AoxI	GGCC	6 cut(s)	436, 638, 662, 678, 858, 885
ApeKI	GCWGC	8 cut(s)	53, 56, 232, 443, 577, 1123, 1126, 1799
ApoI	RAATTY	2 cut(s)	1178, 1535
ArsI	GACNNNNNNTTYG	2 cut(s)	1709, 1741
Asp700I	GAANNNNTTC	2 cut(s)	896, 1037
Asp718I	GGTACC	1 cut(s)	956
AspLEI	GCGC	1 cut(s)	237
AspS9I	GGNCC	2 cut(s)	437, 689
AsuHPI	GGTGA	4 cut(s)	80, 762, 1272, 1387
AvaII	GGWCC	1 cut(s)	689
BaeGI	GKGCMC	1 cut(s)	280
BalI	TGGCCA	4 cut(s)	640, 680, 860, 887
BanI	GGYRCC	2 cut(s)	380, 956
BanII	GRGCYC	2 cut(s)	147, 537
BbsI	GAAGAC	1 cut(s)	498
Bbv12I	GWGCWC	2 cut(s)	147, 537
BbvI	GCAGC	8 cut(s)	40, 43, 244, 430, 589, 1135, 1138, 1786
BccI	CCATC	6 cut(s)	278, 307, 481, 1418, 1570, 1648
BcgI	CGANNNNNNTGC	4 cut(s)	799, 833, 1603, 1637
BciT130I	CCWGG	5 cut(s)	480, 539, 872, 889, 1491
BciVI	GTATCC	1 cut(s)	1554
BclI	TGATCA	1 cut(s)	1660
BcoDI	GTCTC	1 cut(s)	1085
BfaI	CTAG	2 cut(s)	80, 1236
BfmI	CTRYAG	3 cut(s)	102, 527, 1323
BfoI	RGCGCY	1 cut(s)	238
BfuAI	ACCTGC	1 cut(s)	1330
BfuI	GTATCC	1 cut(s)	1554
BisI	GCNGC	9 cut(s)	54, 57, 185, 233, 444, 578, 1124, 1127, 1800
BlpI	GCTNAGC	1 cut(s)	1353
BlsI	GCNGC	9 cut(s)	55, 58, 186, 234, 445, 579, 1125, 1128, 1801
Bme1390I	CCNGG	5 cut(s)	480, 539, 872, 889, 1491
Bme18I	GGWCC	1 cut(s)	689
BmgT120I	GGNCC	2 cut(s)	437, 689
BmiI	GGNNCC	3 cut(s)	382, 690, 958
BmrFI	CCNGG	5 cut(s)	480, 539, 872, 889, 1491
BmsI	GCATC	7 cut(s)	518, 564, 1140, 1605, 1763, 1786, 1811
BpiI	GAAGAC	1 cut(s)	498
BplI	GAGNNNNNCTC	2 cut(s)	1082, 1114
BpmI	CTGGAG	1 cut(s)	521
Bpu10I	CCTNAGC	2 cut(s)	330, 837
Bpu1102I	GCTNAGC	1 cut(s)	1353
BpuEI	CTTGAG	2 cut(s)	1332, 1741
BsaBI	GATNNNNATC	2 cut(s)	1729, 1735
BsaI	GGTCTC	1 cut(s)	1085
BsaJI	CCNNGG	2 cut(s)	478, 632
Bsc4I	CCNNNNNNNGG	6 cut(s)	244, 362, 377, 633, 1490, 1528
Bse1I	ACTGG	6 cut(s)	371, 649, 960, 1283, 1340, 1547
Bse3DI	GCAATG	2 cut(s)	1193, 1299
Bse8I	GATNNNNATC	2 cut(s)	1729, 1735
BseBI	CCWGG	5 cut(s)	480, 539, 872, 889, 1491
BseDI	CCNNGG	2 cut(s)	478, 632
BseGI	GGATG	6 cut(s)	12, 139, 162, 509, 1454, 1581
BseJI	GATNNNNATC	2 cut(s)	1729, 1735
BseLI	CCNNNNNNNGG	6 cut(s)	244, 362, 377, 633, 1490, 1528
BseMI	GCAATG	2 cut(s)	1193, 1299
BseMII	CTCAG	4 cut(s)	344, 1082, 1487, 1754
BseNI	ACTGG	6 cut(s)	371, 649, 960, 1283, 1340, 1547
BseRI	GAGGAG	1 cut(s)	122
BseSI	GKGCMC	1 cut(s)	280
BseXI	GCAGC	8 cut(s)	40, 43, 244, 430, 589, 1135, 1138, 1786
BseYI	CCCAGC	1 cut(s)	439
BshFI	GGCC	6 cut(s)	438, 640, 664, 680, 860, 887
BshNI	GGYRCC	2 cut(s)	380, 956
BsiHKAI	GWGCWC	2 cut(s)	147, 537
BsiSI	CCGG	1 cut(s)	1760
BslFI	GGGAC	1 cut(s)	702
BslI	CCNNNNNNNGG	6 cut(s)	244, 362, 377, 633, 1490, 1528
BsmAI	GTCTC	1 cut(s)	1085
BsmFI	GGGAC	1 cut(s)	702
BsnI	GGCC	6 cut(s)	438, 640, 664, 680, 860, 887
Bso31I	GGTCTC	1 cut(s)	1085
Bsp1286I	GDGCHC	3 cut(s)	147, 280, 537
Bsp1407I	TGTACA	1 cut(s)	1507
Bsp143I	GATC	9 cut(s)	166, 427, 715, 786, 938, 1585, 1660, 1730, 1736
Bsp1720I	GCTNAGC	1 cut(s)	1353
Bsp19I	CCATGG	1 cut(s)	632
BspACI	CCGC	3 cut(s)	184, 790, 936
BspANI	GGCC	6 cut(s)	438, 640, 664, 680, 860, 887
BspCNI	CTCAG	4 cut(s)	343, 1081, 1486, 1753
BspHI	TCATGA	1 cut(s)	712
BspLI	GGNNCC	3 cut(s)	382, 690, 958
BspMAI	CTGCAG	2 cut(s)	531, 1327
BspMI	ACCTGC	1 cut(s)	1330
BspPI	GGATC	5 cut(s)	781, 946, 1593, 1738, 1744
BspQI	GCTCTTC	1 cut(s)	1131
BspT107I	GGYRCC	2 cut(s)	380, 956
BspTNI	GGTCTC	1 cut(s)	1085
BsrBI	CCGCTC	1 cut(s)	936
BsrDI	GCAATG	2 cut(s)	1193, 1299
BsrGI	TGTACA	1 cut(s)	1507
BsrI	ACTGG	6 cut(s)	371, 649, 960, 1283, 1340, 1547
BssECI	CCNNGG	2 cut(s)	478, 632
BssMI	GATC	9 cut(s)	166, 427, 715, 786, 938, 1585, 1660, 1730, 1736
BssT1I	CCWWGG	1 cut(s)	632
Bst2UI	CCWGG	5 cut(s)	480, 539, 872, 889, 1491
Bst4CI	ACNGT	2 cut(s)	103, 584
Bst6I	CTCTTC	3 cut(s)	1032, 1109, 1131
BstAUI	TGTACA	1 cut(s)	1507
BstC8I	GCNNGC	7 cut(s)	61, 794, 858, 1131, 1327, 1359, 1530
BstDEI	CTNAG	7 cut(s)	188, 330, 837, 1068, 1353, 1473, 1740
BstDSI	CCRYGG	1 cut(s)	632
BstENI	CCTNNNNNAGG	1 cut(s)	360
BstF5I	GGATG	6 cut(s)	12, 139, 162, 509, 1454, 1581
BstH2I	RGCGCY	1 cut(s)	238
BstHHI	GCGC	1 cut(s)	237
BstKTI	GATC	9 cut(s)	169, 430, 718, 789, 941, 1588, 1663, 1733, 1739
BstMAI	GTCTC	1 cut(s)	1085
BstMBI	GATC	9 cut(s)	166, 427, 715, 786, 938, 1585, 1660, 1730, 1736
BstMWI	GCNNNNNNNGC	4 cut(s)	224, 1215, 1303, 1358
BstNI	CCWGG	5 cut(s)	480, 539, 872, 889, 1491
BstNSI	RCATGY	1 cut(s)	769
BstSCI	CCNGG	5 cut(s)	478, 537, 870, 887, 1489
BstSFI	CTRYAG	3 cut(s)	102, 527, 1323
BstSLI	GKGCMC	1 cut(s)	280
BstV1I	GCAGC	8 cut(s)	40, 43, 244, 430, 589, 1135, 1138, 1786
BstV2I	GAAGAC	1 cut(s)	498
BstX2I	RGATCY	4 cut(s)	786, 938, 1730, 1736
BstXI	CCANNNNNNTGG	2 cut(s)	636, 856
BstYI	RGATCY	4 cut(s)	786, 938, 1730, 1736
BsuI	GTATCC	1 cut(s)	1554
BsuRI	GGCC	6 cut(s)	438, 640, 664, 680, 860, 887
BtgI	CCRYGG	1 cut(s)	632
BtgZI	GCGATG	2 cut(s)	1626, 1740
BtsCI	GGATG	6 cut(s)	12, 139, 162, 509, 1454, 1581
BtsI	GCAGTG	1 cut(s)	1781
BveI	ACCTGC	1 cut(s)	1330
Cac8I	GCNNGC	7 cut(s)	61, 794, 858, 1131, 1327, 1359, 1530
CaiI	CAGNNNCTG	1 cut(s)	56
CciI	TCATGA	1 cut(s)	712
CfoI	GCGC	1 cut(s)	237
Cfr13I	GGNCC	2 cut(s)	437, 689
Csp6I	GTAC	3 cut(s)	957, 1508, 1816
CviAII	CATG	6 cut(s)	633, 713, 729, 766, 852, 1621
CviQI	GTAC	3 cut(s)	957, 1508, 1816
DdeI	CTNAG	7 cut(s)	188, 330, 837, 1068, 1353, 1473, 1740
DpnI	GATC	9 cut(s)	168, 429, 717, 788, 940, 1587, 1662, 1732, 1738
DpnII	GATC	9 cut(s)	166, 427, 715, 786, 938, 1585, 1660, 1730, 1736
EaeI	YGGCCR	4 cut(s)	638, 678, 858, 885
Eam1104I	CTCTTC	3 cut(s)	1032, 1109, 1131
EarI	CTCTTC	3 cut(s)	1032, 1109, 1131
Ecl136II	GAGCTC	2 cut(s)	145, 535
Eco130I	CCWWGG	1 cut(s)	632
Eco24I	GRGCYC	2 cut(s)	147, 537
Eco31I	GGTCTC	1 cut(s)	1085
Eco32I	GATATC	1 cut(s)	1440
Eco47I	GGWCC	1 cut(s)	689
Eco53kI	GAGCTC	2 cut(s)	145, 535
Eco57I	CTGAAG	4 cut(s)	740, 1155, 1668, 1808
EcoICRI	GAGCTC	2 cut(s)	145, 535
EcoNI	CCTNNNNNAGG	1 cut(s)	360
EcoO109I	RGGNCCY	1 cut(s)	689
EcoRI	GAATTC	1 cut(s)	1178
EcoRII	CCWGG	5 cut(s)	478, 537, 870, 887, 1489
EcoRV	GATATC	1 cut(s)	1440
EcoT14I	CCWWGG	1 cut(s)	632
EcoT38I	GRGCYC	2 cut(s)	147, 537
ErhI	CCWWGG	1 cut(s)	632
FaeI	CATG	6 cut(s)	636, 716, 732, 769, 855, 1624
FaqI	GGGAC	1 cut(s)	702
FatI	CATG	6 cut(s)	632, 712, 728, 765, 851, 1620
FbaI	TGATCA	1 cut(s)	1660
Fnu4HI	GCNGC	9 cut(s)	54, 57, 185, 233, 444, 578, 1124, 1127, 1800
FokI	GGATG	6 cut(s)	19, 146, 169, 496, 1441, 1588
FriOI	GRGCYC	2 cut(s)	147, 537
Fsp4HI	GCNGC	9 cut(s)	54, 57, 185, 233, 444, 578, 1124, 1127, 1800
FspBI	CTAG	2 cut(s)	80, 1236
GlaI	GCGC	1 cut(s)	236
GluI	GCNGC	9 cut(s)	54, 57, 185, 233, 444, 578, 1124, 1127, 1800
GsaI	CCCAGC	1 cut(s)	443
GsuI	CTGGAG	1 cut(s)	521
HaeII	RGCGCY	1 cut(s)	238
HaeIII	GGCC	6 cut(s)	438, 640, 664, 680, 860, 887
HapII	CCGG	1 cut(s)	1760
HhaI	GCGC	1 cut(s)	237
Hin1II	CATG	6 cut(s)	636, 716, 732, 769, 855, 1624
Hin6I	GCGC	1 cut(s)	235
HinP1I	GCGC	1 cut(s)	235
HindIII	AAGCTT	1 cut(s)	794
HinfI	GANTC	5 cut(s)	172, 288, 1033, 1486, 1679
HpaII	CCGG	1 cut(s)	1760
HphI	GGTGA	4 cut(s)	80, 762, 1272, 1387
Hpy166II	GTNNAC	4 cut(s)	557, 914, 1168, 1378
Hpy188III	TCNNGA	8 cut(s)	38, 80, 292, 398, 713, 1404, 1715, 1734
Hpy8I	GTNNAC	4 cut(s)	557, 914, 1168, 1378
HpyAV	CCTTC	7 cut(s)	206, 403, 610, 718, 727, 971, 1156
HpyCH4III	ACNGT	2 cut(s)	103, 584
HpyF10VI	GCNNNNNNNGC	4 cut(s)	224, 1215, 1303, 1358
HpyF3I	CTNAG	7 cut(s)	188, 330, 837, 1068, 1353, 1473, 1740
Hsp92II	CATG	6 cut(s)	636, 716, 732, 769, 855, 1624
HspAI	GCGC	1 cut(s)	235
KpnI	GGTACC	1 cut(s)	960
Ksp22I	TGATCA	1 cut(s)	1660
Kzo9I	GATC	9 cut(s)	166, 427, 715, 786, 938, 1585, 1660, 1730, 1736
LguI	GCTCTTC	1 cut(s)	1131
LmnI	GCTCC	4 cut(s)	215, 532, 540, 933
Lsp1109I	GCAGC	8 cut(s)	40, 43, 244, 430, 589, 1135, 1138, 1786
LweI	GCATC	7 cut(s)	518, 564, 1140, 1605, 1763, 1786, 1811
MaeI	CTAG	2 cut(s)	80, 1236
MaeIII	GTNAC	8 cut(s)	270, 584, 768, 962, 1223, 1589, 1691, 1775
MalI	GATC	9 cut(s)	168, 429, 717, 788, 940, 1587, 1662, 1732, 1738
MbiI	CCGCTC	1 cut(s)	936
MboI	GATC	9 cut(s)	166, 427, 715, 786, 938, 1585, 1660, 1730, 1736
MfeI	CAATTG	1 cut(s)	668
MflI	RGATCY	4 cut(s)	786, 938, 1730, 1736
MhlI	GDGCHC	3 cut(s)	147, 280, 537
MlsI	TGGCCA	4 cut(s)	640, 680, 860, 887
MluCI	AATT	5 cut(s)	469, 668, 1178, 1273, 1535
MluNI	TGGCCA	4 cut(s)	640, 680, 860, 887
Mox20I	TGGCCA	4 cut(s)	640, 680, 860, 887
MroXI	GAANNNNTTC	2 cut(s)	896, 1037
MscI	TGGCCA	4 cut(s)	640, 680, 860, 887
MseI	TTAA	3 cut(s)	780, 1074, 1155
MslI	CAYNNNNRTG	3 cut(s)	503, 634, 752
Msp20I	TGGCCA	4 cut(s)	640, 680, 860, 887
MspA1I	CMGCKG	3 cut(s)	53, 443, 752
MspI	CCGG	1 cut(s)	1760
MspR9I	CCNGG	5 cut(s)	480, 539, 872, 889, 1491
MunI	CAATTG	1 cut(s)	668
MvaI	CCWGG	5 cut(s)	480, 539, 872, 889, 1491
MwoI	GCNNNNNNNGC	4 cut(s)	224, 1215, 1303, 1358
NcoI	CCATGG	1 cut(s)	632
NdeII	GATC	9 cut(s)	166, 427, 715, 786, 938, 1585, 1660, 1730, 1736
NlaIII	CATG	6 cut(s)	636, 716, 732, 769, 855, 1624
NlaIV	GGNNCC	3 cut(s)	382, 690, 958
NmuCI	GTSAC	5 cut(s)	270, 584, 768, 962, 1223
NspI	RCATGY	1 cut(s)	769
OliI	CACNNNNGTG	2 cut(s)	634, 752
PagI	TCATGA	1 cut(s)	712
PciI	ACATGT	1 cut(s)	765
PciSI	GCTCTTC	1 cut(s)	1131
PdmI	GAANNNNTTC	2 cut(s)	896, 1037
PfeI	GAWTC	5 cut(s)	172, 288, 1033, 1486, 1679
PflMI	CCANNNNNTGG	1 cut(s)	377
PfoI	TCCNGGA	1 cut(s)	537
PkrI	GCNGC	9 cut(s)	55, 58, 186, 234, 445, 579, 1125, 1128, 1801
PpuMI	RGGWCCY	1 cut(s)	689
PscI	ACATGT	1 cut(s)	765
Psp124BI	GAGCTC	2 cut(s)	147, 537
Psp5II	RGGWCCY	1 cut(s)	689
Psp6I	CCWGG	5 cut(s)	478, 537, 870, 887, 1489
PspFI	CCCAGC	1 cut(s)	439
PspGI	CCWGG	5 cut(s)	478, 537, 870, 887, 1489
PspN4I	GGNNCC	3 cut(s)	382, 690, 958
PspPI	GGNCC	2 cut(s)	437, 689
PspPPI	RGGWCCY	1 cut(s)	689
PstI	CTGCAG	2 cut(s)	531, 1327
PstNI	CAGNNNCTG	1 cut(s)	56
PsuI	RGATCY	4 cut(s)	786, 938, 1730, 1736
PvuII	CAGCTG	3 cut(s)	53, 443, 752
RsaI	GTAC	3 cut(s)	958, 1509, 1817
RsaNI	GTAC	3 cut(s)	957, 1508, 1816
RseI	CAYNNNNRTG	3 cut(s)	503, 634, 752
SacI	GAGCTC	2 cut(s)	147, 537
SapI	GCTCTTC	1 cut(s)	1131
SaqAI	TTAA	3 cut(s)	780, 1074, 1155
SatI	GCNGC	9 cut(s)	54, 57, 185, 233, 444, 578, 1124, 1127, 1800
Sau3AI	GATC	9 cut(s)	166, 427, 715, 786, 938, 1585, 1660, 1730, 1736
Sau96I	GGNCC	2 cut(s)	437, 689
SbfI	CCTGCAGG	2 cut(s)	531, 1327
ScrFI	CCNGG	5 cut(s)	480, 539, 872, 889, 1491
SdaI	CCTGCAGG	2 cut(s)	531, 1327
SduI	GDGCHC	3 cut(s)	147, 280, 537
SfaNI	GCATC	7 cut(s)	518, 564, 1140, 1605, 1763, 1786, 1811
SfcI	CTRYAG	3 cut(s)	102, 527, 1323
SinI	GGWCC	1 cut(s)	689
SmiMI	CAYNNNNRTG	3 cut(s)	503, 634, 752
SmlI	CTYRAG	2 cut(s)	1347, 1720
SmoI	CTYRAG	2 cut(s)	1347, 1720
Sse8387I	CCTGCAGG	2 cut(s)	531, 1327
Sse9I	AATT	5 cut(s)	469, 668, 1178, 1273, 1535
SsiI	CCGC	3 cut(s)	184, 790, 936
SspMI	CTAG	2 cut(s)	80, 1236
SstI	GAGCTC	2 cut(s)	147, 537
StyD4I	CCNGG	5 cut(s)	478, 537, 870, 887, 1489
StyI	CCWWGG	1 cut(s)	632
TaaI	ACNGT	2 cut(s)	103, 584
TaqI	TCGA	3 cut(s)	147, 397, 809
TasI	AATT	5 cut(s)	469, 668, 1178, 1273, 1535
TatI	WGTACW	1 cut(s)	1507
TauI	GCSGC	1 cut(s)	187
TfiI	GAWTC	5 cut(s)	172, 288, 1033, 1486, 1679
Tru1I	TTAA	3 cut(s)	780, 1074, 1155
Tru9I	TTAA	3 cut(s)	780, 1074, 1155
TseFI	GTSAC	5 cut(s)	270, 584, 768, 962, 1223
TseI	GCWGC	8 cut(s)	53, 56, 232, 443, 577, 1123, 1126, 1799
Tsp45I	GTSAC	5 cut(s)	270, 584, 768, 962, 1223
TspDTI	ATGAA	2 cut(s)	138, 1008
Van91I	CCANNNNNTGG	1 cut(s)	377
VpaK11BI	GGWCC	1 cut(s)	689
XagI	CCTNNNNNAGG	1 cut(s)	360
XapI	RAATTY	2 cut(s)	1178, 1535
XbaI	TCTAGA	1 cut(s)	79
XceI	RCATGY	1 cut(s)	769
XmnI	GAANNNNTTC	2 cut(s)	896, 1037
XspI	CTAG	2 cut(s)	80, 1236

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.