RchiOBHm_Chr1g0336401

Nucleolar complex protein 4 homolog

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
28086738 .. 28086983
246 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 150 bp
ATGGAGTTTGTGAAGTTGGGAAATGGAGGAAGGTTTCACTCTGCTATATTCCATAAGTTTCTTCGTAACACTGTGTACTCTACAACGTTGCTGTATGTCTTGGTAGACTTGCTTGCATCAAAGTATTTCAAGTATATTGATGTCCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

49

Amino Acids

5.77

Weight (kDa)

9.77

Isoelectric Point (pI)

7.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 105
AclI AACGTT 1 cut(s) 86
AfaI GTAC 1 cut(s) 77
AgsI TTSAA 1 cut(s) 130
BmsI GCATC 1 cut(s) 125
BsaWI WCCGGW 1 cut(s) 144
BsiSI CCGG 1 cut(s) 145
Bst4CI ACNGT 1 cut(s) 73
BstC8I GCNNGC 1 cut(s) 114
BtsIMutI CAGTG 1 cut(s) 69
Cac8I GCNNGC 1 cut(s) 114
Csp6I GTAC 1 cut(s) 76
CviQI GTAC 1 cut(s) 76
FaiI YATR 4 cut(s) 47, 54, 96, 135
FblI GTMKAC 1 cut(s) 105
FspEI CC 8 cut(s) 2, 3, 9, 12, 16, 65, 86, 130
HapII CCGG 1 cut(s) 145
HpaII CCGG 1 cut(s) 145
Hpy166II GTNNAC 2 cut(s) 76, 106
Hpy8I GTNNAC 2 cut(s) 76, 106
HpyAV CCTTC 1 cut(s) 24
HpyCH4III ACNGT 1 cut(s) 73
HpyCH4IV ACGT 1 cut(s) 86
HpyCH4V TGCA 1 cut(s) 116
HpySE526I ACGT 1 cut(s) 86
LweI GCATC 1 cut(s) 125
MaeII ACGT 1 cut(s) 86
MaeIII GTNAC 1 cut(s) 65
MboII GAAGA 1 cut(s) 53
MnlI CCTC 1 cut(s) 20
MspI CCGG 1 cut(s) 145
Psp1406I AACGTT 1 cut(s) 86
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
SetI ASST 2 cut(s) 35, 89
SfaNI GCATC 1 cut(s) 125
SgeI CNNG 4 cut(s) 112, 121, 125, 142
TaaI ACNGT 1 cut(s) 73
TaiI ACGT 1 cut(s) 89
TatI WGTACW 1 cut(s) 75
TscAI CASTG 1 cut(s) 76
TspRI CASTG 1 cut(s) 76
XmiI GTMKAC 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.